BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q16594 (264 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6MZM-L nrPDB 485 e-138 6F3T-F nrPDB 241 2e-64 6HQA-F nrPDB 103 7e-23 1TAF-A nrPDB 102 1e-22 3V9R-A nrPDB 34 0.060 4KUD-A nrPDB 34 0.066 3VH5-A nrPDB 33 0.13 3B0B-B nrPDB 33 0.18 6FE8-D nrPDB 32 0.19 4NE1-C nrPDB 32 0.22 4E44-A nrPDB 32 0.25 4NE3-A nrPDB 32 0.28 4Z5T-A nrPDB 31 0.70 5ZBX-A nrPDB 30 0.87 1KU5-A nrPDB 30 1.5 3B0C-T nrPDB 28 3.6 1HFU-A nrPDB 27 7.8 >6MZM-L nrPDB Length = 264 Score = 485 bits (1248), Expect = e-138, Method: Compositional matrix adjust. Identities = 242/249 (97%), Positives = 242/249 (97%) Query: 1 MESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH 60 MESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH Sbjct: 1 MESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH 60 Query: 61 AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY 120 AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKP PDRY Sbjct: 61 AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPXXXXXXXPDRY 120 Query: 121 CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPM 180 CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPM Sbjct: 121 CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPM 180 Query: 181 SLTGQRFTVQMPTSQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANES 240 SLTGQRFTVQMPTSQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANES Sbjct: 181 SLTGQRFTVQMPTSQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANES 240 Query: 241 SNALKRKRE 249 SNALKRKRE Sbjct: 241 SNALKRKRE 249 >6F3T-F nrPDB Length = 116 Score = 241 bits (616), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 5 KTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKA 64 KTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKA Sbjct: 1 KTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKA 60 Query: 65 TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY 120 TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY Sbjct: 61 TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY 116 >6HQA-F nrPDB Length = 153 Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 50/141 (35%), Positives = 79/141 (56%), Gaps = 14/141 (9%) Query: 11 SMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAK-------- 62 ++P+D +++ I I Y+ V Q+++FA+RY T L DA IYS HA Sbjct: 7 AIPRDVRLLHLIFATQNIYSYQDHVPLQLMDFAYRYTTGTLQDATIYSDHAHASGSHISN 66 Query: 63 ------KATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLP 116 A + +D+RLAI R + F PP++ LL++A +RN+ PLP + P G RLP Sbjct: 67 AGNAGTNAQLTTEDIRLAIAARTNYQFKPVPPKELLLELAAERNKKPLPAVIPTWGIRLP 126 Query: 117 PDRYCLTAPNYRLKSLQKKAS 137 P++YCLT ++ L+ ++ S Sbjct: 127 PEKYCLTGKDWVLEDEEEAVS 147 >1TAF-A nrPDB Length = 68 Score = 102 bits (255), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 43/68 (63%), Positives = 57/68 (83%) Query: 13 PKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVR 72 PKDAQ++ ILK++ + EYEPRV+NQ+LEF FRYVT+ILDDAK+Y++HA+K T+D DDVR Sbjct: 1 PKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVR 60 Query: 73 LAIQCRAD 80 LA + D Sbjct: 61 LATEVTLD 68 >3V9R-A nrPDB Length = 90 Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust. Identities = 14/46 (30%), Positives = 26/46 (56%) Query: 31 YEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76 Y PR IN +LE A+ + + D + ++ HA + V+ D+ L ++ Sbjct: 33 YTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVNKSDLMLYLR 78 >4KUD-A nrPDB Length = 136 Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust. Identities = 13/52 (25%), Positives = 29/52 (55%) Query: 31 YEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQS 82 ++ I + E Y+ ++ +D + + HAK+ T+ D++LA + R ++S Sbjct: 85 FQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKLARRLRGERS 136 >3VH5-A nrPDB Length = 140 Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust. Identities = 15/56 (26%), Positives = 33/56 (58%), Gaps = 2/56 (3%) Query: 19 MAQ-ILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 +AQ + +D G+ + + + + E FR D ++++ HAK++T+ ++DV+L Sbjct: 28 LAQDVAEDKGVL-FSKQTVAAISEITFRQAENFARDLEMFARHAKRSTITSEDVKL 82 >3B0B-B nrPDB Length = 107 Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust. Identities = 13/52 (25%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 22 ILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 + +D G+ + + + + E FR D ++++ HAK++T+ ++DV+L Sbjct: 32 VAEDKGVL-FSKQTVAAISEITFRQCENFARDLEMFARHAKRSTITSEDVKL 82 >6FE8-D nrPDB Length = 519 Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust. Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 15/82 (18%) Query: 26 MGITEYEPRVINQMLEFAF--RYVTTILDDAKIYSSHAKKAT-VDA-------DDVRLAI 75 + I EY P++I + LE+AF RY +LD K+ +H T +DA +++RLA Sbjct: 75 LNIFEYSPQLIEKWLEYAFWLRYDCLVLDCFKV--NHLYDGTLIDALEWTYLDNELRLAY 132 Query: 76 QCRA---DQSFTSPPPRDFLLD 94 +A + +T + +++D Sbjct: 133 FNKASMLEVWYTFKEYKKWVID 154 >4NE1-C nrPDB Length = 105 Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 ++ + I + E FR D ++++ HAK+ T++ +DV+L Sbjct: 28 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 71 >4E44-A nrPDB Length = 112 Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 ++ + I + E FR D ++++ HAK+ T++ +DV+L Sbjct: 43 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 86 >4NE3-A nrPDB Length = 93 Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 ++ + I + E FR D ++++ HAK+ T++ +DV+L Sbjct: 28 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 71 >4Z5T-A nrPDB Length = 138 Score = 30.8 bits (68), Expect = 0.70, Method: Compositional matrix adjust. Identities = 12/52 (23%), Positives = 30/52 (57%) Query: 31 YEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQS 82 ++ + + E + Y+ +L+D + + HAK+ T+ D++LA + R +++ Sbjct: 87 FQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 138 >5ZBX-A nrPDB Length = 141 Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust. Identities = 12/52 (23%), Positives = 31/52 (59%) Query: 31 YEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQS 82 ++ + + + E A ++ + +DA + + HAK+ T+ D++LA + R +++ Sbjct: 90 WQAQALLALQEAAEAFLVHLFEDAYLLTLHAKRVTIMPKDIQLARRIRGERA 141 >1KU5-A nrPDB Length = 70 Score = 29.6 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 3/49 (6%) Query: 28 ITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76 ++E +V+ + LE Y I A ++ HA + TV +D++LAI+ Sbjct: 24 VSEQAAKVLAEYLE---EYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 69 >3B0C-T nrPDB Length = 111 Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust. Identities = 13/32 (40%), Positives = 18/32 (56%) Query: 45 RYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76 RY I D + YS HA + TV+ DV L ++ Sbjct: 39 RYFKQISSDLEAYSQHAGRKTVEMADVELLMR 70 >1HFU-A nrPDB Length = 503 Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 157 PSTPTLGTPTPQTMSVSTKVGTPMSLTGQRFTVQMPTSQSPAVKASIPATSAVQ 210 P+ P G PTP V+ + + +G RFT+ +SP+V + S Q Sbjct: 314 PAAP--GIPTPGAADVNLRF--QLGFSGGRFTINGTAYESPSVPTLLQIMSGAQ 363 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6MZM-L nrPDB 411 e-115 6HQA-F nrPDB 219 1e-57 6F3T-F nrPDB 198 3e-51 1TAF-A nrPDB 117 6e-27 Sequences not found previously or not previously below threshold: 3V9R-A nrPDB 36 0.025 4NE3-A nrPDB 35 0.043 4NE1-C nrPDB 35 0.043 4E44-A nrPDB 35 0.043 4Z5T-A nrPDB 34 0.073 3B0B-B nrPDB 34 0.075 3VH5-A nrPDB 34 0.089 6FE8-D nrPDB 33 0.15 4KUD-A nrPDB 32 0.29 1KU5-A nrPDB 31 0.64 5ZBX-A nrPDB 30 0.99 1CJY-A nrPDB 29 1.6 1YHP-A nrPDB 29 2.0 4ETP-A nrPDB 29 2.5 1F9T-A nrPDB 29 2.5 1JHN-A nrPDB 29 2.8 3LOY-A nrPDB 29 3.2 CONVERGED! >6MZM-L nrPDB Length = 264 Score = 411 bits (1057), Expect = e-115, Method: Composition-based stats. Identities = 242/249 (97%), Positives = 242/249 (97%) Query: 1 MESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH 60 MESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH Sbjct: 1 MESGKTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSH 60 Query: 61 AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY 120 AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKP PDRY Sbjct: 61 AKKATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPXXXXXXXPDRY 120 Query: 121 CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPM 180 CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPM Sbjct: 121 CLTAPNYRLKSLQKKASTSAGRITVPRLSVGSVTSRPSTPTLGTPTPQTMSVSTKVGTPM 180 Query: 181 SLTGQRFTVQMPTSQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANES 240 SLTGQRFTVQMPTSQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANES Sbjct: 181 SLTGQRFTVQMPTSQSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANES 240 Query: 241 SNALKRKRE 249 SNALKRKRE Sbjct: 241 SNALKRKRE 249 >6HQA-F nrPDB Length = 153 Score = 219 bits (557), Expect = 1e-57, Method: Composition-based stats. Identities = 51/146 (34%), Positives = 80/146 (54%), Gaps = 14/146 (9%) Query: 6 TASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAK--- 62 T ++P+D +++ I I Y+ V Q+++FA+RY T L DA IYS HA Sbjct: 2 TNEQAAIPRDVRLLHLIFATQNIYSYQDHVPLQLMDFAYRYTTGTLQDATIYSDHAHASG 61 Query: 63 -----------KATVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYS 111 A + +D+RLAI R + F PP++ LL++A +RN+ PLP + P Sbjct: 62 SHISNAGNAGTNAQLTTEDIRLAIAARTNYQFKPVPPKELLLELAAERNKKPLPAVIPTW 121 Query: 112 GPRLPPDRYCLTAPNYRLKSLQKKAS 137 G RLPP++YCLT ++ L+ ++ S Sbjct: 122 GIRLPPEKYCLTGKDWVLEDEEEAVS 147 >6F3T-F nrPDB Length = 116 Score = 198 bits (502), Expect = 3e-51, Method: Composition-based stats. Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 5 KTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKA 64 KTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKA Sbjct: 1 KTASPKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKA 60 Query: 65 TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY 120 TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY Sbjct: 61 TVDADDVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRY 116 >1TAF-A nrPDB Length = 68 Score = 117 bits (292), Expect = 6e-27, Method: Composition-based stats. Identities = 43/68 (63%), Positives = 57/68 (83%) Query: 13 PKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVR 72 PKDAQ++ ILK++ + EYEPRV+NQ+LEF FRYVT+ILDDAK+Y++HA+K T+D DDVR Sbjct: 1 PKDAQVIMSILKELNVQEYEPRVVNQLLEFTFRYVTSILDDAKVYANHARKKTIDLDDVR 60 Query: 73 LAIQCRAD 80 LA + D Sbjct: 61 LATEVTLD 68 >3V9R-A nrPDB Length = 90 Score = 35.5 bits (80), Expect = 0.025, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 1/64 (1%) Query: 19 MAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCR 78 + Q+L I +Y PR IN +LE A+ + + D + ++ HA + V+ D+ L ++ + Sbjct: 22 LQQVLSSEDI-KYTPRFINSLLELAYLQLGEMGSDLQAFARHAGRGVVNKSDLMLYLRKQ 80 Query: 79 ADQS 82 D Sbjct: 81 PDLQ 84 >4NE3-A nrPDB Length = 93 Score = 34.7 bits (78), Expect = 0.043, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 ++ + I + E FR D ++++ HAK+ T++ +DV+L Sbjct: 28 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 71 >4NE1-C nrPDB Length = 105 Score = 34.7 bits (78), Expect = 0.043, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 ++ + I + E FR D ++++ HAK+ T++ +DV+L Sbjct: 28 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 71 >4E44-A nrPDB Length = 112 Score = 34.7 bits (78), Expect = 0.043, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 25/44 (56%) Query: 30 EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 ++ + I + E FR D ++++ HAK+ T++ +DV+L Sbjct: 43 QFSKQTIAAISELTFRQCENFAKDLEMFARHAKRTTINTEDVKL 86 >4Z5T-A nrPDB Length = 138 Score = 34.0 bits (76), Expect = 0.073, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 34/63 (53%), Gaps = 1/63 (1%) Query: 17 QMMAQILKDMGIT-EYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAI 75 +++ +I +D ++ + + E + Y+ +L+D + + HAK+ T+ D++LA Sbjct: 72 RLVREIAQDFNTDLRFQSAAVGALQEASEAYLVGLLEDTNLCAIHAKRVTIMPKDIQLAR 131 Query: 76 QCR 78 + R Sbjct: 132 RIR 134 >3B0B-B nrPDB Length = 107 Score = 34.0 bits (76), Expect = 0.075, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 25/43 (58%) Query: 31 YEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 + + + + E FR D ++++ HAK++T+ ++DV+L Sbjct: 40 FSKQTVAAISEITFRQCENFARDLEMFARHAKRSTITSEDVKL 82 >3VH5-A nrPDB Length = 140 Score = 33.6 bits (75), Expect = 0.089, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 25/43 (58%) Query: 31 YEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 + + + + E FR D ++++ HAK++T+ ++DV+L Sbjct: 40 FSKQTVAAISEITFRQAENFARDLEMFARHAKRSTITSEDVKL 82 >6FE8-D nrPDB Length = 519 Score = 32.8 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 5/60 (8%) Query: 10 KSMPKDAQMMAQILKD-MGITEYEPRVINQMLEFAF--RYVTTILDDAKIYSSHAKKATV 66 K K + M + + I EY P++I + LE+AF RY +LD K+ +H T+ Sbjct: 58 KRSKKLLRYMYPVFATYLNIFEYSPQLIEKWLEYAFWLRYDCLVLDCFKV--NHLYDGTL 115 >4KUD-A nrPDB Length = 136 Score = 32.0 bits (71), Expect = 0.29, Method: Composition-based stats. Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 2/69 (2%) Query: 14 KDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRL 73 + + +AQ K ++ I + E Y+ ++ +D + + HAK+ T+ D++L Sbjct: 70 RLVREIAQDFKTD--LRFQSSAIGALQESVEAYLVSLFEDTNLAAIHAKRVTIQKKDIKL 127 Query: 74 AIQCRADQS 82 A + R ++S Sbjct: 128 ARRLRGERS 136 >1KU5-A nrPDB Length = 70 Score = 30.9 bits (68), Expect = 0.64, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%) Query: 39 MLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQ 76 + E+ Y I A ++ HA + TV +D++LAI+ Sbjct: 32 LAEYLEEYAIEIAKKAVEFARHAGRKTVKVEDIKLAIK 69 >5ZBX-A nrPDB Length = 141 Score = 30.1 bits (66), Expect = 0.99, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 28/50 (56%) Query: 29 TEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCR 78 ++ + + + E A ++ + +DA + + HAK+ T+ D++LA + R Sbjct: 88 FNWQAQALLALQEAAEAFLVHLFEDAYLLTLHAKRVTIMPKDIQLARRIR 137 >1CJY-A nrPDB Length = 749 Score = 29.3 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%) Query: 70 DVRLAIQCRADQSFTSPPPRDFLL-DIARQRNQTPLPLIKPY 110 D+ ++ A S +SPP ++ LL + + N+ P P I PY Sbjct: 569 DLIISFDFSARPSDSSPPFKELLLAEKWAKMNKLPFPKIDPY 610 >1YHP-A nrPDB Length = 212 Score = 29.0 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Query: 9 PKSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDA 68 PK P D+++++ + T Y V+N + F + T + K + K TV Sbjct: 140 PKLTPPDSEIVSHLTVRQTHTPY-DYVVNGSVYFKYSPTTGQVTVIKKDETFPKNMTVTQ 198 Query: 69 DD 70 DD Sbjct: 199 DD 200 >4ETP-A nrPDB Length = 403 Score = 29.0 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 195 QSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANESSNALK 245 Q + K IP ++ L+ SL G L+ N+ S + NE+ N+L+ Sbjct: 339 QPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLR 389 >1F9T-A nrPDB Length = 358 Score = 29.0 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 25/51 (49%) Query: 195 QSPAVKASIPATSAVQNVLINPSLIGSKNILITTNMMSSQNTANESSNALK 245 Q + K IP ++ L+ SL G L+ N+ S + NE+ N+L+ Sbjct: 294 QPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLR 344 >1JHN-A nrPDB Length = 424 Score = 28.6 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Query: 212 VLINPSLIGSKNILITTNMMSSQNTANESSNALKRKREDDDDDDDDDDDYD 262 +++NP S IL+ ++++S N N+ + + RE +D +D +D+D Sbjct: 197 LILNPD--NSFEILVDQSIVNSGNLLNDMTPPVNPSREIEDPEDQKPEDWD 245 >3LOY-A nrPDB Length = 633 Score = 28.6 bits (62), Expect = 3.2, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 28/80 (35%), Gaps = 20/80 (25%) Query: 28 ITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDADDVRLAIQCRADQSFTSPP 87 + Y+P + + + + ++ DA +D R D PP Sbjct: 1 VHPYDP-----ISDAELQLTSQLIKDATKGPERPHFIQID----------RLD-----PP 40 Query: 88 PRDFLLDIARQRNQTPLPLI 107 +D + + +R PLP I Sbjct: 41 KKDMIRYLEAERTGKPLPHI 60 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.305 0.126 0.342 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,838,600 Number of Sequences: 36641 Number of extensions: 375013 Number of successful extensions: 1911 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 74 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1396 Number of HSP's gapped (non-prelim): 324 length of query: 264 length of database: 10,336,785 effective HSP length: 95 effective length of query: 169 effective length of database: 6,855,890 effective search space: 1158645410 effective search space used: 1158645410 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 58 (27.0 bits)