BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q16543 (378 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5FWP-E nrPDB 773 0.0 2NCA-A nrPDB 256 2e-68 5MDN-A nrPDB 29 4.1 6G1K-A nrPDB 28 4.8 3S27-A nrPDB 28 6.8 4UAQ-A nrPDB 28 8.0 6ELZ-w nrPDB 28 8.7 >5FWP-E nrPDB Length = 378 Score = 773 bits (1996), Expect = 0.0, Method: Compositional matrix adjust. Identities = 378/378 (100%), Positives = 378/378 (100%) Query: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60 Query: 61 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 120 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS Sbjct: 61 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 120 Query: 121 KDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVH 180 KDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVH Sbjct: 121 KDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVH 180 Query: 181 LVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTK 240 LVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTK Sbjct: 181 LVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTK 240 Query: 241 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES 300 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES Sbjct: 241 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES 300 Query: 301 LPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPG 360 LPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPG Sbjct: 301 LPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPG 360 Query: 361 DPLLEAVPKTGDEKDVSV 378 DPLLEAVPKTGDEKDVSV Sbjct: 361 DPLLEAVPKTGDEKDVSV 378 >2NCA-A nrPDB Length = 128 Score = 256 bits (653), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 126/126 (100%), Positives = 126/126 (100%) Query: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK Sbjct: 3 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 62 Query: 61 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 120 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS Sbjct: 63 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 122 Query: 121 KDGFSK 126 KDGFSK Sbjct: 123 KDGFSK 128 >5MDN-A nrPDB Length = 783 Score = 28.9 bits (63), Expect = 4.1, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 6/80 (7%) Query: 295 VEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNS-KASEAKE 353 ++V +PE+++K +++ + + + D +Y+M+ ID G+ VP + EA+E Sbjct: 82 LKVVAKVPEDVRK---LREAALGAPGVVDVYEADIRYYMRYMIDKGV-VPCAWNVVEARE 137 Query: 354 GEEAGPGDPLLEAVPKTGDE 373 + GP PL E V G E Sbjct: 138 AGKLGP-LPLYEVVEWAGVE 156 >6G1K-A nrPDB Length = 921 Score = 28.5 bits (62), Expect = 4.8, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 30/66 (45%) Query: 25 TASLFRWRHQARVERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERL 84 TA W Q + +F+ E EEL C+ + + + R +ELE+ + ++ L Sbjct: 219 TAFQLSWELQELSKVENEFKAEYEELSHQCKHFAKDLLDQTRSSRELELILNFRDDMNLL 278 Query: 85 QAEAQQ 90 Q EA Sbjct: 279 QDEANN 284 >3S27-A nrPDB Length = 816 Score = 28.1 bits (61), Expect = 6.8, Method: Compositional matrix adjust. Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 18/108 (16%) Query: 129 VNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCEETAN 188 +NT + E + E K +T E++E + + G+ R W D+ + + D + L+ + Sbjct: 203 LNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLDL--- 259 Query: 189 YLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQ 236 LE + C L + +V ++ + P F Q Sbjct: 260 --------LEAPDPCTLETFLGRVPMVFNVVI-------LSPHGYFAQ 292 >4UAQ-A nrPDB Length = 778 Score = 27.7 bits (60), Expect = 8.0, Method: Compositional matrix adjust. Identities = 17/52 (32%), Positives = 30/52 (57%), Gaps = 7/52 (13%) Query: 133 PEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSD---NVHL 181 P++ EE S++V E++ +T +QI + + R W D YL+D ++HL Sbjct: 648 PKRYEELSDKVSEERLETIC----RQIMLYHLDRGWADHLAYLADIRESIHL 695 >6ELZ-w nrPDB Length = 841 Score = 27.7 bits (60), Expect = 8.7, Method: Compositional matrix adjust. Identities = 13/22 (59%), Positives = 15/22 (68%) Query: 285 KRLGPGGLDPVEVYESLPEELQ 306 KRL P LDP EV+E LP+ Q Sbjct: 206 KRLDPRLLDPKEVFEELPDGQQ 227 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5FWP-E nrPDB 706 0.0 2NCA-A nrPDB 222 2e-58 Sequences not found previously or not previously below threshold: 5OOL-q nrPDB 33 0.20 5Z96-A nrPDB 33 0.24 6G1K-A nrPDB 33 0.25 1WZ2-A nrPDB 32 0.34 2I1J-A nrPDB 32 0.36 3S27-A nrPDB 31 0.75 2ZXH-A nrPDB 31 0.93 5MDN-A nrPDB 31 0.95 4LDP-A nrPDB 30 1.2 4UAQ-A nrPDB 30 1.3 5XXB-C nrPDB 30 1.3 2L7B-A nrPDB 30 1.4 1TD9-A nrPDB 30 1.4 5HPL-A nrPDB 29 2.7 3OLM-A nrPDB 29 2.7 4BE8-A nrPDB 29 3.1 4RM9-A nrPDB 29 3.2 3S46-A nrPDB 29 3.9 CONVERGED! >5FWP-E nrPDB Length = 378 Score = 706 bits (1821), Expect = 0.0, Method: Composition-based stats. Identities = 378/378 (100%), Positives = 378/378 (100%) Query: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK Sbjct: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60 Query: 61 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 120 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS Sbjct: 61 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 120 Query: 121 KDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVH 180 KDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVH Sbjct: 121 KDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVH 180 Query: 181 LVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTK 240 LVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTK Sbjct: 181 LVCEETANYLVIWCIDLEVEEKCALMEQVAHQTIVMQFILELAKSLKVDPRACFRQFFTK 240 Query: 241 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES 300 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES Sbjct: 241 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES 300 Query: 301 LPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPG 360 LPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPG Sbjct: 301 LPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNSKASEAKEGEEAGPG 360 Query: 361 DPLLEAVPKTGDEKDVSV 378 DPLLEAVPKTGDEKDVSV Sbjct: 361 DPLLEAVPKTGDEKDVSV 378 >2NCA-A nrPDB Length = 128 Score = 222 bits (565), Expect = 2e-58, Method: Composition-based stats. Identities = 126/126 (100%), Positives = 126/126 (100%) Query: 1 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 60 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK Sbjct: 3 MVDYSVWDHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDRGCRECKRK 62 Query: 61 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 120 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS Sbjct: 63 VAECQRKLKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMRKKEKSMPWNVDTLS 122 Query: 121 KDGFSK 126 KDGFSK Sbjct: 123 KDGFSK 128 >5OOL-q nrPDB Length = 222 Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 11/94 (11%) Query: 27 SLFRWRHQARVERMEQFQKEKEELDRGCRECKRKVAEC-----QRKLKELEVAEGGKAEL 81 SL + RV+++ + QK +E ++ EC K+ + Q++ + E A+ K Sbjct: 95 SLATMQESLRVKQLAEEQKRRER-EQHIAECMAKMPQMIVNWQQQQRENWEKAQADKERR 153 Query: 82 ERLQAEAQQL---RKEERS--WEQKLEEMRKKEK 110 RLQAEAQ+L + + RS +++ L+++ KKE+ Sbjct: 154 ARLQAEAQELLGYQVDPRSARFQELLQDLEKKER 187 >5Z96-A nrPDB Length = 755 Score = 32.8 bits (73), Expect = 0.24, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 25/49 (51%) Query: 25 TASLFRWRHQARVERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEV 73 TA W Q + +F+ E EEL R C++ + + + R +ELE+ Sbjct: 219 TAFQLSWELQELSKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEI 267 >6G1K-A nrPDB Length = 921 Score = 32.8 bits (73), Expect = 0.25, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 30/64 (46%) Query: 25 TASLFRWRHQARVERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERL 84 TA W Q + +F+ E EEL C+ + + + R +ELE+ + ++ L Sbjct: 219 TAFQLSWELQELSKVENEFKAEYEELSHQCKHFAKDLLDQTRSSRELELILNFRDDMNLL 278 Query: 85 QAEA 88 Q EA Sbjct: 279 QDEA 282 >1WZ2-A nrPDB Length = 967 Score = 32.4 bits (72), Expect = 0.34, Method: Composition-based stats. Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 6/110 (5%) Query: 10 IEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEEL--DRGCRECKRKVAECQRK 67 IEV+ E+ I TA ++W+ V F+ EEL D R+ ++VA+ +K Sbjct: 850 IEVAKIENAKRAYIYTAEDWKWKVAEVVSEKRDFKSSMEELMKDSEIRKHGKEVAKIVQK 909 Query: 68 LKELEVAEGGKAELERLQAEAQQLRKEERSWEQKLEEMR----KKEKSMP 113 L + + + E+ EA++ ++E E + KK+++MP Sbjct: 910 LIKERTFDVKRINEEKALREAKEFMEKELGIEIIINPTEDKGGKKKQAMP 959 >2I1J-A nrPDB Length = 575 Score = 32.4 bits (72), Expect = 0.36, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 2/76 (2%) Query: 34 QARVERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERLQAEAQQLRK 93 QA E +EQ Q E + + + E K A ++KL++ A+ + E+ R+Q E + Sbjct: 376 QAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAK--QEEVSRIQQEVELKDS 433 Query: 94 EERSWEQKLEEMRKKE 109 E R ++++E+ R+K+ Sbjct: 434 ETRRLQEEVEDARRKQ 449 >3S27-A nrPDB Length = 816 Score = 31.2 bits (69), Expect = 0.75, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 29/56 (51%) Query: 129 VNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSDNVHLVCE 184 +NT + E + E K +T E++E + + G+ R W D+ + + D + L+ + Sbjct: 203 LNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGWGDNAERVLDMIRLLLD 258 >2ZXH-A nrPDB Length = 637 Score = 30.8 bits (68), Expect = 0.93, Method: Composition-based stats. Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 6/42 (14%) Query: 271 IEKAMKEYEEEERKK-RLGPGGLDPVEVY-----ESLPEELQ 306 IE + ++ ++ER + L P GLD +E+Y SLPEE+Q Sbjct: 307 IEDKIVKFPDKERHQIFLEPEGLDTIEIYPNGLSTSLPEEVQ 348 >5MDN-A nrPDB Length = 783 Score = 30.8 bits (68), Expect = 0.95, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 6/81 (7%) Query: 295 VEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYHMQRCIDSGLWVPNS-KASEAKE 353 ++V +PE+++K +++ + + + D +Y+M+ ID G+ VP + EA+E Sbjct: 82 LKVVAKVPEDVRK---LREAALGAPGVVDVYEADIRYYMRYMIDKGV-VPCAWNVVEARE 137 Query: 354 GEEAGPGDPLLEAVPKTGDEK 374 + GP PL E V G E+ Sbjct: 138 AGKLGP-LPLYEVVEWAGVEE 157 >4LDP-A nrPDB Length = 455 Score = 30.5 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 9/84 (10%) Query: 230 PRACFRQFFTK--IKTADRQYMEGFNDELEAFKERV-RGRAKLRIEKAMKEYEEEERKKR 286 PR C + TK + QY E +D+ +A ER+ RG A+L +E ++E R+ Sbjct: 262 PRVCITRGLTKRRLSRVTEQYGEQ-SDQEQAMVERLLRGAARLDVEVIATLSDDEVREMG 320 Query: 287 LGPGGLDPVEVYESLP--EELQKC 308 P V V+E +P E L+ C Sbjct: 321 ELPSN---VRVHEYVPLNELLESC 341 >4UAQ-A nrPDB Length = 778 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 7/59 (11%) Query: 126 KSMVNTKPEKTEEDSEEVREQKHKTFVEKYEKQIKHFGMLRRWDDSQKYLSD---NVHL 181 + + P++ EE S++V E++ +T +QI + + R W D YL+D ++HL Sbjct: 641 EELAELAPKRYEELSDKVSEERLETIC----RQIMLYHLDRGWADHLAYLADIRESIHL 695 >5XXB-C nrPDB Length = 416 Score = 30.5 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 5/73 (6%) Query: 35 ARVERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERLQAEAQQLRKE 94 AR R++ E EL E KV++ + +K LE G AELER++A A++LR Sbjct: 139 ARGHRID----EVPELPLVVSEKLEKVSKTREAVKILETL-GCTAELERVRASAKKLRAG 193 Query: 95 ERSWEQKLEEMRK 107 + + MR+ Sbjct: 194 KGKMRGRRTHMRR 206 >2L7B-A nrPDB Length = 307 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 12/78 (15%) Query: 31 WRHQARVERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERLQAEAQQ 90 W + R E + ++ LD E K +VAE + KL+E +A+ RLQAEA Q Sbjct: 218 WGERLRARMEEMGSRTRDRLD----EVKEQVAEVRAKLEE-------QAQQIRLQAEAAQ 266 Query: 91 LRKEERSWEQKLEEMRKK 108 R + R +E E+M+++ Sbjct: 267 ARLKSR-FEPLAEDMQRQ 283 >1TD9-A nrPDB Length = 329 Score = 30.5 bits (67), Expect = 1.4, Method: Composition-based stats. Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 241 IKTADRQYMEGFNDELEAFKERVRGRAKLRIEKAMKEYEEEERKKRLGPGGLDPVEVYES 300 +K D EG D ++AF ER +G+A EE+ RK L + VY+ Sbjct: 73 VKIYDPHTYEGMEDLVQAFVERRKGKAT----------EEQARKALLDENYFGTMLVYKG 122 Query: 301 LPEEL 305 L + L Sbjct: 123 LADGL 127 >5HPL-A nrPDB Length = 380 Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 22/34 (64%) Query: 299 ESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYH 332 E +PE+L FD +++++L I+++D D K H Sbjct: 240 ELIPEDLVTVFDERELELLIGGIAEIDIEDWKKH 273 >3OLM-A nrPDB Length = 429 Score = 29.3 bits (64), Expect = 2.7, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 22/34 (64%) Query: 299 ESLPEELQKCFDVKDVQMLQDAISKMDPTDAKYH 332 E +PE+L FD +++++L I+++D D K H Sbjct: 289 ELIPEDLVTVFDERELELLIGGIAEIDIEDWKKH 322 >4BE8-A nrPDB Length = 385 Score = 29.3 bits (64), Expect = 3.1, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 15/65 (23%) Query: 270 RIEKAMKEYEEEERKKRLGPGGLDPVEVYESLPEELQKCFDVKDVQMLQDAISKMDPTDA 329 RI+K M ++E +E +P++L K FD ++++L + +D D Sbjct: 229 RIQKQMAAFKEG---------------FFELIPQDLIKIFDENELELLMSGLGDVDVNDW 273 Query: 330 KYHMQ 334 + H + Sbjct: 274 REHTK 278 >4RM9-A nrPDB Length = 587 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 16/165 (9%) Query: 8 DHIEVSDDEDETHPNIDTASLFRWRHQARVERMEQFQKEKEELDR--------------G 53 D IEV + + L R + + +R E ++EKE++ R Sbjct: 299 DTIEVQQMKAQAREEKHQKQLERQQLETEKKRRETVEREKEQMMREKEELMLRLQDYEEK 358 Query: 54 CRECKRKVAE-CQRKLKELEVAEGGKAELERLQAE-AQQLRKEERSWEQKLEEMRKKEKS 111 ++ +R+++E QR L+ E + + E ERL+A+ LR +E Q +++++ +E+ Sbjct: 359 TKKAERELSEQIQRALQLEEERKRAQEEAERLEADRMAALRAKEELERQAVDQIKSQEQL 418 Query: 112 MPWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVREQKHKTFVEKYE 156 + +K + K ++ EE +E + K E Sbjct: 419 AAELAEYTAKIALLEEARRRKEDEVEEWQHRAKEAQDDLVKTKEE 463 >3S46-A nrPDB Length = 367 Score = 28.9 bits (63), Expect = 3.9, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 20/41 (48%) Query: 220 LELAKSLKVDPRACFRQFFTKIKTADRQYMEGFNDELEAFK 260 +E A+ L C FT TAD + + FN +LE FK Sbjct: 145 VEQAQDLLQQHGVCVEGIFTHFATADEESDDYFNAQLERFK 185 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.131 0.379 Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,140,006 Number of Sequences: 36641 Number of extensions: 603605 Number of successful extensions: 1954 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 90 Number of HSP's that attempted gapping in prelim test: 1850 Number of HSP's gapped (non-prelim): 186 length of query: 378 length of database: 10,336,785 effective HSP length: 99 effective length of query: 279 effective length of database: 6,709,326 effective search space: 1871901954 effective search space used: 1871901954 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 60 (27.7 bits)