BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q15631 (228 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4WYV-A nrPDB 464 e-131 3RIU-A nrPDB 229 1e-60 3QB5-K nrPDB 60 5e-10 3RIU-C nrPDB 47 8e-06 1EDT-A nrPDB 29 1.7 6EKR-A nrPDB 28 3.2 4DEP-B nrPDB 28 4.5 5Y6Y-B nrPDB 28 4.6 4Q0G-A nrPDB 27 6.0 6HIZ-Ck nrPDB 27 6.8 >4WYV-A nrPDB Length = 240 Score = 464 bits (1194), Expect = e-131, Method: Compositional matrix adjust. Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK Sbjct: 13 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 72 Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT Sbjct: 73 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 132 Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG Sbjct: 133 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 192 Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 228 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK Sbjct: 193 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 240 >3RIU-A nrPDB Length = 218 Score = 229 bits (583), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 114/212 (53%), Positives = 146/212 (68%), Gaps = 2/212 (0%) Query: 5 EIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREH 64 +IF Q ++ EQ++RE IR VV+ +E ++E LQ +H + I C AR+ Sbjct: 9 DIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIH--SDLSQISAACGLARKQ 66 Query: 65 FGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124 L PA QYYR+ +HW F+ QRL+F+ A V+YLE LVTRE V E+LG Sbjct: 67 VELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLG 126 Query: 125 IEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLL 184 ++ + +GFHLDVEDYL G+L LASELSR + NSVT GDY RPL+IS FI +L++GFRLL Sbjct: 127 LKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLL 186 Query: 185 NLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216 NLKND LRKR+D LKYDVKK+EEVVYD+SIRG Sbjct: 187 NLKNDGLRKRFDALKYDVKKIEEVVYDVSIRG 218 >3QB5-K nrPDB Length = 290 Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 22/229 (9%) Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66 F Q L A D E + K+ + + ++ + LL + +DI ++ Sbjct: 39 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESEIKLD 95 Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAV------- 119 V+ + + + E ++FH LQ V +F +++T +L++ + + Sbjct: 96 GVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFT 155 Query: 120 TEILGIE--------PDREKG-FHLDVE--DYLSGVLILASELSRLSVNSVTAGDYSRPL 168 TE G E D++ G + L V DYL GV L EL R+ +NSV GD P Sbjct: 156 TEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 215 Query: 169 HISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216 +S F+ ++ GF + N + K+ LK + KVE Y L +RG Sbjct: 216 EVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 264 >3RIU-C nrPDB Length = 269 Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 1/101 (0%) Query: 117 EAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINE 176 E V I +E ++ F +D +Y+ G+ L EL R +NS+ +GD L + Sbjct: 146 EDVQAIAQVESPKKFQFFVDPTEYILGLSDLTGELMRRCINSLGSGDTDTCLDTCKALQH 205 Query: 177 LDSGFRLLNLKND-SLRKRYDGLKYDVKKVEEVVYDLSIRG 216 SG+ LN + L ++ +K V K E V Y++ +RG Sbjct: 206 FYSGYISLNCQRARELWRKITTMKQSVLKAENVCYNVKVRG 246 >1EDT-A nrPDB Length = 271 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 11/30 (36%), Positives = 19/30 (63%) Query: 28 VQSLEQTAREILTLLQGVHQGAGFQDIPKR 57 ++ L+Q ++L + G HQGAGF + P + Sbjct: 76 IRPLQQQGIKVLLSVLGNHQGAGFANFPSQ 105 >6EKR-A nrPDB Length = 312 Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 5/52 (9%) Query: 162 GDYSRPLHISTFINELD---SGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVY 210 G+YSRP+ FI + D SGFR N + ++ +D ++ +++Y Sbjct: 63 GEYSRPVRDDLFITDYDFFVSGFREFNESLRDIGSKWSS--FDSRRANKIIY 112 >4DEP-B nrPDB Length = 321 Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 59 LKAREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFV 105 L EH GT+ + KT EQ R H+H ++L F+ A V Sbjct: 31 LNPNEHKGTITWYKDDSKTPVSTEQASRIHQH----KEKLWFVPAKV 73 >5Y6Y-B nrPDB Length = 326 Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Query: 176 ELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAA 223 ELD+ + LN+K G K DV +EEV+ ++ FN + AA Sbjct: 260 ELDNVYTSLNMKE---YIHGGGFKQDVPNLEEVIVQKNVAHFNNQEAA 304 >4Q0G-A nrPDB Length = 529 Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust. Identities = 30/139 (21%), Positives = 54/139 (38%), Gaps = 17/139 (12%) Query: 24 IRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQ 83 ++K +++ E + +L + V G F REHFG + + ++ K + Sbjct: 116 VKKHLRAQEVALQNMLPCIYLVDSGGAFLPRQDEVFPDREHFGRIFYNQATMSAKGIPQV 175 Query: 84 YYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSG 143 VL A+V + E ++ RE T LG P + +G Sbjct: 176 --------AAVLGSCTAGGAYVPAMSDEAVIVREQGTIFLGGPP---------LVKAATG 218 Query: 144 VLILASELSRLSVNSVTAG 162 ++ A EL ++S T+G Sbjct: 219 EIVSAEELGGGDLHSRTSG 237 >6HIZ-Ck nrPDB Length = 874 Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 6/83 (7%) Query: 55 PKRCLKAREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLV 114 P LK R+ G K H + + + ++ +E +R +R +F+ +LE + + Sbjct: 785 PSVELKVRKPSGQSKAHYSLIDNERIEKRSRELYEKYRDAKKRSLFVTPMETWLEVKGMQ 844 Query: 115 TREAVTEILGIEPDREKGFHLDV 137 R++V E G+ LD Sbjct: 845 VRKSVDNA------DEDGYTLDA 861 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4WYV-A nrPDB 333 4e-92 3RIU-A nrPDB 292 7e-80 3QB5-K nrPDB 265 9e-72 3RIU-C nrPDB 185 1e-47 Sequences not found previously or not previously below threshold: 5JRE-A nrPDB 57 9e-09 3ZC1-A nrPDB 40 0.001 5BWK-E nrPDB 34 0.062 5BW8-C nrPDB 34 0.084 3PL1-A nrPDB 30 0.81 1VLV-A nrPDB 29 1.8 4XD7-D nrPDB 28 2.8 5OQJ-0 nrPDB 28 3.2 5U8S-7 nrPDB 28 4.6 1DEQ-C nrPDB 27 5.2 5Y6Y-B nrPDB 27 5.5 2W45-A nrPDB 27 5.5 4FGU-A nrPDB 27 6.0 >4WYV-A nrPDB Length = 240 Score = 333 bits (854), Expect = 4e-92, Method: Composition-based stats. Identities = 228/228 (100%), Positives = 228/228 (100%) Query: 1 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 60 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK Sbjct: 13 MSVSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLK 72 Query: 61 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 120 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT Sbjct: 73 AREHFGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT 132 Query: 121 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG Sbjct: 133 EILGIEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 192 Query: 181 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 228 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK Sbjct: 193 FRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 240 >3RIU-A nrPDB Length = 218 Score = 292 bits (748), Expect = 7e-80, Method: Composition-based stats. Identities = 114/212 (53%), Positives = 145/212 (68%), Gaps = 2/212 (0%) Query: 5 EIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREH 64 +IF Q ++ EQ++RE IR VV+ +E ++E LQ +H I C AR+ Sbjct: 9 DIFSNYQKYIDNEQEVRENIRIVVREIEHLSKEAQIKLQIIHS--DLSQISAACGLARKQ 66 Query: 65 FGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124 L PA QYYR+ +HW F+ QRL+F+ A V+YLE LVTRE V E+LG Sbjct: 67 VELCAQKYQKLAELVPAGQYYRYSDHWTFITQRLIFIIALVIYLEAGFLVTRETVAEMLG 126 Query: 125 IEPDREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLL 184 ++ + +GFHLDVEDYL G+L LASELSR + NSVT GDY RPL+IS FI +L++GFRLL Sbjct: 127 LKISQSEGFHLDVEDYLLGILQLASELSRFATNSVTMGDYERPLNISHFIGDLNTGFRLL 186 Query: 185 NLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216 NLKND LRKR+D LKYDVKK+EEVVYD+SIRG Sbjct: 187 NLKNDGLRKRFDALKYDVKKIEEVVYDVSIRG 218 >3QB5-K nrPDB Length = 290 Score = 265 bits (678), Expect = 9e-72, Method: Composition-based stats. Identities = 59/229 (25%), Positives = 99/229 (43%), Gaps = 22/229 (9%) Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66 F Q L A D E + K+ + + ++ + LL + +DI ++ Sbjct: 39 FKSFQQELDARHDKYERLVKLSRDITVESKRTIFLLHRITSAPDMEDI---LTESEIKLD 95 Query: 67 TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAV------- 119 V+ + + + E ++FH LQ V +F +++T +L++ + + Sbjct: 96 GVRQKIFQVAQELSGEDMHQFHRAITTGLQEYVEAVSFQHFIKTRSLISMDEINKQLIFT 155 Query: 120 TEILGIE--------PDREKG-FHLDVE--DYLSGVLILASELSRLSVNSVTAGDYSRPL 168 TE G E D++ G + L V DYL GV L EL R+ +NSV GD P Sbjct: 156 TEDNGKENKTPSSDAQDKQFGTWRLRVTPVDYLLGVADLTGELMRMCINSVGNGDIDTPF 215 Query: 169 HISTFINELDSGFRLL-NLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRG 216 +S F+ ++ GF + N + K+ LK + KVE Y L +RG Sbjct: 216 EVSQFLRQVYDGFSFIGNTGPYEVSKKLYTLKQSLAKVENACYALKVRG 264 >3RIU-C nrPDB Length = 269 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 51/244 (20%), Positives = 95/244 (38%), Gaps = 36/244 (14%) Query: 7 FVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFG 66 F L + D E I K+ + + ++ I+ LL + Q+ K +AR+ Sbjct: 5 FRIYSNELIMKHDRHERIVKLSRDITIESKRIIFLLHSIDSRK--QNKEKVLEEARQRLN 62 Query: 67 -TVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYL---------ETETL--- 113 + + ++ + + Y+F + LQ + ++ YL ET+++ Sbjct: 63 KLIAVNFRAVALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSDW 122 Query: 114 --------------------VTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSR 153 E V I +E ++ F +D +Y+ G+ L EL R Sbjct: 123 QAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYILGLSDLTGELMR 182 Query: 154 LSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND-SLRKRYDGLKYDVKKVEEVVYDL 212 +NS+ +GD L + SG+ LN + L ++ +K V K E V Y++ Sbjct: 183 RCINSLGSGDTDTCLDTCKALQHFYSGYISLNCQRARELWRKITTMKQSVLKAENVCYNV 242 Query: 213 SIRG 216 +RG Sbjct: 243 KVRG 246 >5JRE-A nrPDB Length = 219 Score = 56.6 bits (135), Expect = 9e-09, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 69/192 (35%), Gaps = 20/192 (10%) Query: 14 LAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLT 73 L ++ +++ + Q + + + L + + +D E KT + Sbjct: 39 LDNLKEEYQKLEEKKQEIVDRSIRMSKLSKSLIYSMIREDYKSADKYKEELTNLAKTQIE 98 Query: 74 SLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGF 133 LK +Y F+ + LQ V A Y++ + ++E + Sbjct: 99 ELK------KYPMFYSNGFIGLQEYVEALALYYYIKENRIPSKEELG------------- 139 Query: 134 HLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRK 193 +D YL G+ +A E+ R S + G+ + L + LKN LR+ Sbjct: 140 -VDTWVYLFGIGDIAGEILRKSSEELIKGNIEYAKKAKQDLESLYLDLLYIELKNFDLRR 198 Query: 194 RYDGLKYDVKKV 205 + D + + K+ Sbjct: 199 KLDYVSNIINKL 210 >3ZC1-A nrPDB Length = 199 Score = 39.7 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 29/198 (14%), Positives = 67/198 (33%), Gaps = 32/198 (16%) Query: 26 KVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREHFGTVKTHLTSLKTKFPAEQYY 85 KV++ + + + + L+ ++ + KA E VK + ++P +Y Sbjct: 25 KVLREMRIHSTKSIALIH----AGKVEEAEQELKKAIELLEKVKAY-----REYPEIYFY 75 Query: 86 RFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVL 145 ++ +Q LV AF + E + + +L+G Sbjct: 76 LCNDA----MQELVEAIAFKNAISGEFTFEID---------------LEVTPAAFLNGFA 116 Query: 146 ILASELSRLSVNSVTAGDYSRPLHISTFINELDSGFRLLNLKND----SLRKRYDGLKYD 201 EL R ++ + GD+ + + ++ D LRK+ D + Sbjct: 117 DAVGELRRYALTKLIEGDFKSAERMLEVMEKIYERLMEFTTFPDKLVSGLRKKLDVARGG 176 Query: 202 VKKVEEVVYDLSIRGFNK 219 +++ + + N+ Sbjct: 177 IERTKSDYIAAKVARLNE 194 >5BWK-E nrPDB Length = 319 Score = 33.9 bits (76), Expect = 0.062, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Query: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP 127 + L + K A YY H+ R + R V ++ +E L+++ A++ + Sbjct: 5 LAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIE---LISQGALSFL----K 57 Query: 128 DREKGFHLDVEDYLSGVLILA 148 ++ G D+ YL V LA Sbjct: 58 AKQGGSGTDLIFYLLEVYDLA 78 >5BW8-C nrPDB Length = 305 Score = 33.5 bits (75), Expect = 0.084, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Query: 68 VKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEP 127 + L + K A YY H+ R + R V ++ +E L+++ A++ + Sbjct: 13 LAKTLQRFENKIKAGDYYEAHQTLRTIANRYVRSKSYEHAIE---LISQGALSFL----K 65 Query: 128 DREKGFHLDVEDYLSGVLILA 148 ++ G D+ YL V LA Sbjct: 66 AKQGGSGTDLIFYLLEVYDLA 86 >3PL1-A nrPDB Length = 186 Score = 30.1 bits (66), Expect = 0.81, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 18/50 (36%) Query: 131 KGFHLDVEDYLSGVLILASELSRLSVNSVTAGDYSRPLHISTFINELDSG 180 K FH+D D+ SG +S V+ D+ L S G Sbjct: 48 KDFHIDPGDHFSGTPDYSSSWPPHCVSGTPGADFHPSLDTSAIEAVFYKG 97 >1VLV-A nrPDB Length = 325 Score = 28.9 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 36/107 (33%), Gaps = 5/107 (4%) Query: 94 VLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASELSR 153 VL R+V F Y + T E + E G+ L+ ++ + R Sbjct: 109 VLGRMVDAIMFRGYKQE----TVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFGR 164 Query: 154 L-SVNSVTAGDYSRPLHISTFINELDSGFRLLNLKNDSLRKRYDGLK 199 L V V GD + S I G + + L+ R D K Sbjct: 165 LKGVKVVFMGDTRNNVATSLMIACAKMGMNFVACGPEELKPRSDVFK 211 >4XD7-D nrPDB Length = 483 Score = 28.1 bits (61), Expect = 2.8, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 45/131 (34%), Gaps = 22/131 (16%) Query: 23 EIRKVVQSLEQTAREILTLLQGVHQGAG----------FQDIPKRCLKARE--------H 64 E+ ++ + + TA+ +T +Q ++ A F + R+ Sbjct: 294 EMGQLQERITSTAKGSITSIQAIYVPADDYTDPAPATTFSHLDATTNLERKLAEMGIYPA 353 Query: 65 FGTVKTHLTSLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVTEILG 124 + + +L + E++Y+ + LQR L + L + L + + Sbjct: 354 VDPLASTSRALAPEIVGEEHYQVARKVQQTLQRYKELQDIIAILGMDELSDEDKLV---- 409 Query: 125 IEPDREKGFHL 135 + R F L Sbjct: 410 VHRARRIQFFL 420 >5OQJ-0 nrPDB Length = 778 Score = 28.1 bits (61), Expect = 3.2, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 30/93 (32%), Gaps = 11/93 (11%) Query: 92 RFVLQRLVFLAAFVVYLETETLVTREAVTEILGIEPDREKGFHLDVEDYLSGVLILASEL 151 RF +RL L + E E + + + E+GF L +E Y + + + Sbjct: 375 RFCSERLSLLVRTLEVTEVEDFTALKDIATFATLISTYEEGFLLIIEPYEIENAAVPNPI 434 Query: 152 SRLSVNSVTAGDYSRPLHISTFINELDSGFRLL 184 R L S I + F + Sbjct: 435 MRF-----------TCLDASIAIKPVFERFSSV 456 >5U8S-7 nrPDB Length = 845 Score = 27.8 bits (60), Expect = 4.6, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 59/177 (33%), Gaps = 24/177 (13%) Query: 74 SLKTKFPAEQYYRFHEHWRFVLQRLVFLAAFVVYLETETLVTREAVT-----------EI 122 L + F + ++ Y +T+ V EAV + Sbjct: 611 KLAEHVTYVHMHNKQPDLDFTPVEPSKMREYIAYAKTKRPVMSEAVNDYVVQAYIRLRQD 670 Query: 123 LGIEPDREKGFHLDVEDYLSGVLILASELSRLSV-NSVTAGDYSRPLHISTFINELDSGF 181 E D + F L G++ L+ L++L + + V D L + E S + Sbjct: 671 SKREMDSKFSFGQATPRTLLGIIRLSQALAKLRLADMVDIDDVEEALRLVRVSKE--SLY 728 Query: 182 RLLN-LKNDS---------LRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAAACVEK 228 + N K D ++K + E +V + +RGF + C+++ Sbjct: 729 QETNKSKEDESPTTKIFTIIKKMLQETGKNTLSYENIVKTVRLRGFTMLQLSNCIQE 785 >1DEQ-C nrPDB Length = 411 Score = 27.4 bits (59), Expect = 5.2, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 3/110 (2%) Query: 3 VSEIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAR 62 +++ Q + + E I V++ ARE++ +Q + P A Sbjct: 25 IADFLNNYQTSVDKDLRTLEGILYQVENKTSEARELVKAIQ-ISYNPDQPSKPNNIESAT 83 Query: 63 EHFGTVKTHLTSLKTKFPA-EQYYRF-HEHWRFVLQRLVFLAAFVVYLET 110 ++ ++ + +T E RF E + Q++V L VV LE Sbjct: 84 KNSKSMMEEIMKYETLISTHESTIRFLQEIYNSNSQKIVNLRDKVVQLEA 133 >5Y6Y-B nrPDB Length = 326 Score = 27.4 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 3/49 (6%) Query: 175 NELDSGFRLLNLKNDSLRKRYDGLKYDVKKVEEVVYDLSIRGFNKETAA 223 ELD+ + LN+K G K DV +EEV+ ++ FN + AA Sbjct: 259 GELDNVYTSLNMKEY---IHGGGFKQDVPNLEEVIVQKNVAHFNNQEAA 304 >2W45-A nrPDB Length = 470 Score = 27.4 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 6/37 (16%) Query: 128 DREKGFHLDVEDYLSGVLILASELSRLSVNSVTAGDY 164 +R+ GF + D + GV L VN + GD+ Sbjct: 184 NRQFGFMISPTDGIFGVS------LDLCVNVESQGDF 214 >4FGU-A nrPDB Length = 429 Score = 27.4 bits (59), Expect = 6.0, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 26/60 (43%) Query: 5 EIFVELQGFLAAEQDIREEIRKVVQSLEQTAREILTLLQGVHQGAGFQDIPKRCLKAREH 64 ++ E+Q L A I + +RK+V L + E+ LL G P+ L R H Sbjct: 318 QLTEEIQRHLDARHLIEKSVRKIVSLLAASEAEVEQLLSERAPLTGHSCYPEALLHFRTH 377 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.131 0.315 Lambda K H 0.267 0.0401 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,348,100 Number of Sequences: 36641 Number of extensions: 258151 Number of successful extensions: 870 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 840 Number of HSP's gapped (non-prelim): 41 length of query: 228 length of database: 10,336,785 effective HSP length: 94 effective length of query: 134 effective length of database: 6,892,531 effective search space: 923599154 effective search space used: 923599154 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 57 (26.6 bits)