BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q15370 (118 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6C5X-B nrPDB 242 3e-65 5N4W-B nrPDB 214 8e-57 5ZBI-A nrPDB 31 0.11 4ADX-5 nrPDB 30 0.18 5XXB-l nrPDB 30 0.22 3J79-f nrPDB 30 0.27 3L10-B nrPDB 30 0.29 6HD7-o nrPDB 29 0.44 5WYJ-Sg nrPDB 29 0.53 4V8Y-A5 nrPDB 28 0.62 4V7E-Bf nrPDB 28 0.71 2IZ1-A nrPDB 28 0.75 3J81-f nrPDB 28 0.79 4UG0-Lm nrPDB 28 0.81 3AXC-A nrPDB 28 0.87 5CHV-C nrPDB 28 0.88 4V8M-Bs nrPDB 28 0.94 3J7R-Sf nrPDB 28 0.95 3AI5-A nrPDB 28 1.2 5TTE-F nrPDB 28 1.2 3Q3F-A nrPDB 27 1.9 4XGC-D nrPDB 26 3.3 5XY3-m nrPDB 26 4.4 6HCJ-m3 nrPDB 26 4.5 3P0G-A nrPDB 26 4.7 2L7R-A nrPDB 26 5.0 2L2N-A nrPDB 25 5.6 3EZK-A nrPDB 25 8.3 >6C5X-B nrPDB Length = 118 Score = 242 bits (618), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 118/118 (100%), Positives = 118/118 (100%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC Sbjct: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 Query: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ 118 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ Sbjct: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ 118 >5N4W-B nrPDB Length = 104 Score = 214 bits (544), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC Sbjct: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 Query: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK 104 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK Sbjct: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK 104 >5ZBI-A nrPDB Length = 532 Score = 31.2 bits (69), Expect = 0.11, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 9 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 66 >4ADX-5 nrPDB Length = 129 Score = 30.4 bits (67), Expect = 0.18, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 14/83 (16%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I D + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLDVEASDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GECGFTSQTARPQAPATVGLAFR 80 + Q +T+ L R Sbjct: 57 SDYNI-------QKESTLHLVLR 72 >5XXB-l nrPDB Length = 129 Score = 30.0 bits (66), Expect = 0.22, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 14/83 (16%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I D + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLDVEPSDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GECGFTSQTARPQAPATVGLAFR 80 + Q +T+ L R Sbjct: 57 SDYNI-------QKESTLHLVLR 72 >3J79-f nrPDB Length = 128 Score = 30.0 bits (66), Expect = 0.27, Method: Compositional matrix adjust. Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 14/83 (16%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I D + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLDVEPSDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GECGFTSQTARPQAPATVGLAFR 80 + Q +T+ L R Sbjct: 57 SDYNI-------QKESTLHLVLR 72 >3L10-B nrPDB Length = 169 Score = 29.6 bits (65), Expect = 0.29, Method: Compositional matrix adjust. Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 8/100 (8%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 59 Query: 61 GFTSQTA-------RPQAPATVGLAFRADDTFEALCIEPF 93 ++ R T+ D ++ I+PF Sbjct: 60 NIQKESTLHLVLRLRGGGGETIKFVADGDIGSGSVIIKPF 99 >6HD7-o nrPDB Length = 128 Score = 29.3 bits (64), Expect = 0.44, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 14/83 (16%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GECGFTSQTARPQAPATVGLAFR 80 + Q +T+ L R Sbjct: 57 SDYNI-------QKESTLHLVLR 72 >5WYJ-Sg nrPDB Length = 152 Score = 28.9 bits (63), Expect = 0.53, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GE 59 + Sbjct: 57 SD 58 >4V8Y-A5 nrPDB Length = 152 Score = 28.5 bits (62), Expect = 0.62, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GE 59 + Sbjct: 57 SD 58 >4V7E-Bf nrPDB Length = 155 Score = 28.5 bits (62), Expect = 0.71, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GE 59 + Sbjct: 57 AD 58 >2IZ1-A nrPDB Length = 474 Score = 28.5 bits (62), Expect = 0.75, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%) Query: 14 IFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTA 67 IF + E L I + +LKR DE Y D++LD G +TS++A Sbjct: 221 IFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESA 274 >3J81-f nrPDB Length = 150 Score = 28.1 bits (61), Expect = 0.79, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 34/62 (54%), Gaps = 7/62 (11%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 56 Query: 58 GE 59 + Sbjct: 57 SD 58 >4UG0-Lm nrPDB Length = 128 Score = 28.1 bits (61), Expect = 0.81, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 13 TIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARP 69 TI + + S T+ +K + EGI PPD+QRL + L+DG+TL + Sbjct: 12 TITLEVEPSDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTLSDYNI------- 61 Query: 70 QAPATVGLAFR 80 Q +T+ L R Sbjct: 62 QKESTLHLVLR 72 >3AXC-A nrPDB Length = 154 Score = 28.1 bits (61), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 14/83 (16%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 3 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 58 Query: 58 GECGFTSQTARPQAPATVGLAFR 80 + Q +T+ L R Sbjct: 59 SDYNI-------QKESTLHLVLR 74 Score = 28.1 bits (61), Expect = 0.87, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 40/83 (48%), Gaps = 14/83 (16%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTL 57 M +F+ KT I + + S T+ +K + EGI PPD+QRL + L+DG+TL Sbjct: 79 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTL 134 Query: 58 GECGFTSQTARPQAPATVGLAFR 80 + Q +T+ L R Sbjct: 135 SDYNI-------QKESTLHLVLR 150 >5CHV-C nrPDB Length = 155 Score = 28.1 bits (61), Expect = 0.88, Method: Compositional matrix adjust. Identities = 16/48 (33%), Positives = 21/48 (43%) Query: 15 FTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGF 62 S TV ELK+ + + P +QRL +L DG TL G Sbjct: 16 LVSVTNSMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGL 63 >4V8M-Bs nrPDB Length = 128 Score = 28.1 bits (61), Expect = 0.94, Method: Compositional matrix adjust. Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 28/119 (23%) Query: 13 TIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARP 69 TI + + S T+ +K + EGI PPD+QRL + L++G+TL + Sbjct: 12 TIALEVEASDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEEGRTLADYNI------- 61 Query: 70 QAPATVGLAFR-----ADDTFEAL----------CIEPFSSPPELPDVMKPQDSGSSAN 113 Q +T+ L R + T EAL C ++ P + + G +N Sbjct: 62 QKESTLHLVLRLRGGVMEPTLEALAKKYNWEKKVCRRCYARLPVRATNCRKKGCGHCSN 120 >3J7R-Sf nrPDB Length = 156 Score = 28.1 bits (61), Expect = 0.95, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >3AI5-A nrPDB Length = 309 Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 8/80 (10%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 236 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDY 294 Query: 61 GFTSQTARPQAPATVGLAFR 80 Q +T+ L R Sbjct: 295 NI-------QKESTLHLVLR 307 >5TTE-F nrPDB Length = 86 Score = 27.7 bits (60), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 13 TIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARP 69 TI + + S T+ ++ + EGI PPD+QRL + L+DG+TL + Sbjct: 22 TITLEVESSDTIDNVRARIQDREGI---PPDQQRLIFAGRQLEDGRTLADYNI------- 71 Query: 70 QAPATVGLAFR 80 Q +T+ L R Sbjct: 72 QRESTLHLVLR 82 >3Q3F-A nrPDB Length = 189 Score = 26.9 bits (58), Expect = 1.9, Method: Compositional matrix adjust. Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 13/71 (18%) Query: 13 TIFTDAKESSTVFELKRIV---EGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARP 69 TI + + S T+ +K + EGI PPD+QRL + L+DG+TL + Sbjct: 117 TITLEVEPSDTIENVKAKIQDKEGI---PPDQQRLIFAGKQLEDGRTLSDYNI------- 166 Query: 70 QAPATVGLAFR 80 Q +T+ L R Sbjct: 167 QKESTLHLVLR 177 >4XGC-D nrPDB Length = 459 Score = 26.2 bits (56), Expect = 3.3, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 7/29 (24%) Query: 68 RPQAP-------ATVGLAFRADDTFEALC 89 RPQ+P A VG F DD E LC Sbjct: 313 RPQSPHITAEKMAAVGSQFEGDDKIELLC 341 >5XY3-m nrPDB Length = 132 Score = 25.8 bits (55), Expect = 4.4, Method: Compositional matrix adjust. Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%) Query: 32 EGILKRPPDEQRLYKDDQLLDDGKTL 57 EGI PPD+QRL + L+DG TL Sbjct: 34 EGI---PPDQQRLIFAGKQLEDGNTL 56 >6HCJ-m3 nrPDB Length = 102 Score = 25.8 bits (55), Expect = 4.5, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 38 PPDEQRLYKDDQLLDDGKTLGE 59 PPD+QRL + L+DG+TL + Sbjct: 11 PPDQQRLIFAGKQLEDGRTLSD 32 >3P0G-A nrPDB Length = 501 Score = 25.8 bits (55), Expect = 4.7, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Query: 12 TTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQ 49 + +F +AK +FE+ RI EG+ ++YKD + Sbjct: 228 SRVFQEAKRQLNIFEMLRIDEGL------RLKIYKDTE 259 >2L7R-A nrPDB Length = 93 Score = 25.8 bits (55), Expect = 5.0, Method: Compositional matrix adjust. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 6 MIRRHKTTIFTDAKE--------SSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTL 57 ++ R +F A+E TV ++K V + P++Q + L+D TL Sbjct: 14 LVPRGSMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATL 73 Query: 58 GECGFTSQTARPQAPATVG 76 G+CG + T A +G Sbjct: 74 GQCGVEALTTLEVAGRMLG 92 >2L2N-A nrPDB Length = 103 Score = 25.4 bits (54), Expect = 5.6, Method: Compositional matrix adjust. Identities = 18/72 (25%), Positives = 34/72 (47%) Query: 19 KESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLA 78 +E + ++L V I+K P + L++ +LD + GF ++ A Q+ A V L Sbjct: 24 QEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALR 83 Query: 79 FRADDTFEALCI 90 A + + C+ Sbjct: 84 ELAKSSELSQCV 95 >3EZK-A nrPDB Length = 577 Score = 25.0 bits (53), Expect = 8.3, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 10 HKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDG 54 H I+T A E + FE + +K +RLY D+ + DDG Sbjct: 293 HFYDIWTAAVEGKSGFEPYTAIWNSVK-----ERLYNDEDIFDDG 332 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6C5X-B nrPDB 238 3e-64 5N4W-B nrPDB 214 7e-57 Sequences not found previously or not previously below threshold: 4ADX-5 nrPDB 34 0.014 5XXB-l nrPDB 34 0.015 3J79-f nrPDB 34 0.015 6HD7-o nrPDB 33 0.036 5WYJ-Sg nrPDB 33 0.036 4V8Y-A5 nrPDB 33 0.036 3L10-B nrPDB 33 0.036 3J81-f nrPDB 33 0.036 4V7E-Bf nrPDB 33 0.038 3AXC-A nrPDB 32 0.050 5ZBI-A nrPDB 32 0.053 4UG0-Lm nrPDB 32 0.053 3J7R-Sf nrPDB 32 0.053 3AI5-A nrPDB 32 0.053 3Q3F-A nrPDB 32 0.064 5TTE-F nrPDB 31 0.12 4V8M-Bs nrPDB 31 0.15 2IZ1-A nrPDB 29 0.46 6HCJ-m3 nrPDB 28 0.60 5CHV-C nrPDB 28 0.73 5XY3-m nrPDB 28 1.0 5XXU-f nrPDB 27 2.0 4XGC-D nrPDB 27 2.0 2L7R-A nrPDB 27 2.4 2L2N-A nrPDB 27 2.7 5VYC-e1 nrPDB 26 3.5 3P0G-A nrPDB 26 4.3 3EZK-A nrPDB 25 6.4 1XI8-A nrPDB 25 6.5 CONVERGED! >6C5X-B nrPDB Length = 118 Score = 238 bits (608), Expect = 3e-64, Method: Composition-based stats. Identities = 118/118 (100%), Positives = 118/118 (100%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC Sbjct: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 Query: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ 118 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ Sbjct: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ 118 >5N4W-B nrPDB Length = 104 Score = 214 bits (545), Expect = 7e-57, Method: Composition-based stats. Identities = 104/104 (100%), Positives = 104/104 (100%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC Sbjct: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 Query: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK 104 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK Sbjct: 61 GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMK 104 >4ADX-5 nrPDB Length = 129 Score = 33.9 bits (76), Expect = 0.014, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I D + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >5XXB-l nrPDB Length = 129 Score = 33.9 bits (76), Expect = 0.015, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I D + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >3J79-f nrPDB Length = 128 Score = 33.9 bits (76), Expect = 0.015, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I D + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >6HD7-o nrPDB Length = 128 Score = 32.7 bits (73), Expect = 0.036, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >5WYJ-Sg nrPDB Length = 152 Score = 32.7 bits (73), Expect = 0.036, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >4V8Y-A5 nrPDB Length = 152 Score = 32.7 bits (73), Expect = 0.036, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >3L10-B nrPDB Length = 169 Score = 32.7 bits (73), Expect = 0.036, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >3J81-f nrPDB Length = 150 Score = 32.7 bits (73), Expect = 0.036, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >4V7E-Bf nrPDB Length = 155 Score = 32.7 bits (73), Expect = 0.038, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD 58 >3AXC-A nrPDB Length = 154 Score = 32.3 bits (72), Expect = 0.050, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 3 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 60 Score = 32.3 bits (72), Expect = 0.050, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 79 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 136 >5ZBI-A nrPDB Length = 532 Score = 32.3 bits (72), Expect = 0.053, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 9 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 66 >4UG0-Lm nrPDB Length = 128 Score = 32.3 bits (72), Expect = 0.053, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >3J7R-Sf nrPDB Length = 156 Score = 32.3 bits (72), Expect = 0.053, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 1 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 58 >3AI5-A nrPDB Length = 309 Score = 32.3 bits (72), Expect = 0.053, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 1/59 (1%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 M +F+ KT I + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 236 MQIFVKTLTGKT-ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 293 >3Q3F-A nrPDB Length = 189 Score = 32.0 bits (71), Expect = 0.064, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 27/47 (57%) Query: 13 TIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 TI + + S T+ +K ++ PPD+QRL + L+DG+TL + Sbjct: 117 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 163 >5TTE-F nrPDB Length = 86 Score = 30.8 bits (68), Expect = 0.12, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 27/47 (57%) Query: 13 TIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGE 59 TI + + S T+ ++ ++ PPD+QRL + L+DG+TL + Sbjct: 22 TITLEVESSDTIDNVRARIQDREGIPPDQQRLIFAGRQLEDGRTLAD 68 >4V8M-Bs nrPDB Length = 128 Score = 30.8 bits (68), Expect = 0.15, Method: Composition-based stats. Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 13/93 (13%) Query: 1 MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC 60 M +F+ KT I + + S T+ +K ++ PPD+QRL + L++G+TL + Sbjct: 1 MQIFVKTLTGKT-IALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADY 59 Query: 61 GFTSQTARPQAPATVGLAFR-----ADDTFEAL 88 Q +T+ L R + T EAL Sbjct: 60 NI-------QKESTLHLVLRLRGGVMEPTLEAL 85 >2IZ1-A nrPDB Length = 474 Score = 28.9 bits (63), Expect = 0.46, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 26/54 (48%) Query: 14 IFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTA 67 IF + E L I + +LKR DE Y D++LD G +TS++A Sbjct: 221 IFEEWNEGELDSYLIEITKEVLKRKDDEGEGYIVDKILDKAGNKGTGKWTSESA 274 >6HCJ-m3 nrPDB Length = 102 Score = 28.5 bits (62), Expect = 0.60, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 16/22 (72%) Query: 38 PPDEQRLYKDDQLLDDGKTLGE 59 PPD+QRL + L+DG+TL + Sbjct: 11 PPDQQRLIFAGKQLEDGRTLSD 32 >5CHV-C nrPDB Length = 155 Score = 28.5 bits (62), Expect = 0.73, Method: Composition-based stats. Identities = 16/42 (38%), Positives = 21/42 (50%) Query: 21 SSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGF 62 S TV ELK+ + + P +QRL +L DG TL G Sbjct: 22 SMTVSELKKQIAQKIGVPAFQQRLAHQTAVLQDGLTLSSLGL 63 >5XY3-m nrPDB Length = 132 Score = 27.7 bits (60), Expect = 1.0, Method: Composition-based stats. Identities = 14/26 (53%), Positives = 17/26 (65%), Gaps = 3/26 (11%) Query: 32 EGILKRPPDEQRLYKDDQLLDDGKTL 57 EGI PPD+QRL + L+DG TL Sbjct: 34 EGI---PPDQQRLIFAGKQLEDGNTL 56 >5XXU-f nrPDB Length = 154 Score = 27.0 bits (58), Expect = 2.0, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 31/64 (48%) Query: 13 TIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAP 72 T+ + +ST+ ++K ++ D+QRL L+D +TLGE G + Q+ Sbjct: 12 TLALEVAPTSTIRDVKEQLQARQGIEADDQRLCFGLHALEDDETLGELGVEEECTLYQSL 71 Query: 73 ATVG 76 +G Sbjct: 72 ELLG 75 >4XGC-D nrPDB Length = 459 Score = 27.0 bits (58), Expect = 2.0, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 7/29 (24%) Query: 68 RPQAP-------ATVGLAFRADDTFEALC 89 RPQ+P A VG F DD E LC Sbjct: 313 RPQSPHITAEKMAAVGSQFEGDDKIELLC 341 >2L7R-A nrPDB Length = 93 Score = 26.6 bits (57), Expect = 2.4, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 6 MIRRHKTTIFTDAKE--------SSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTL 57 ++ R +F A+E TV ++K V + P++Q + L+D TL Sbjct: 14 LVPRGSMQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATL 73 Query: 58 GECGFTSQTARPQAPATVG 76 G+CG + T A +G Sbjct: 74 GQCGVEALTTLEVAGRMLG 92 >2L2N-A nrPDB Length = 103 Score = 26.6 bits (57), Expect = 2.7, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%) Query: 19 KESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTSQTARPQAPATVGLA 78 +E + ++L V I+K P + L++ +LD + GF ++ A Q+ A V L Sbjct: 24 QEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNSLPGFFNRKAAEQSAAEVALR 83 Query: 79 FRADDTFEALCI 90 A + + C+ Sbjct: 84 ELAKSSELSQCV 95 >5VYC-e1 nrPDB Length = 133 Score = 26.2 bits (56), Expect = 3.5, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 5 LMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGECGFTS 64 L +R + F + TV ++K V + P++Q + L+D TLG+CG + Sbjct: 3 LFVRAQELHTF-EVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVEA 61 Query: 65 QTARPQAPATVG 76 T A +G Sbjct: 62 LTTLEVAGRMLG 73 >3P0G-A nrPDB Length = 501 Score = 25.8 bits (55), Expect = 4.3, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 6/38 (15%) Query: 12 TTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQ 49 + +F +AK +FE+ RI EG+ ++YKD + Sbjct: 228 SRVFQEAKRQLNIFEMLRIDEGL------RLKIYKDTE 259 >3EZK-A nrPDB Length = 577 Score = 25.4 bits (54), Expect = 6.4, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 10 HKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDG 54 H I+T A E + FE + +K +RLY D+ + DDG Sbjct: 293 HFYDIWTAAVEGKSGFEPYTAIWNSVK-----ERLYNDEDIFDDG 332 >1XI8-A nrPDB Length = 403 Score = 25.4 bits (54), Expect = 6.5, Method: Composition-based stats. Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 6/65 (9%) Query: 54 GKTLGECGFTSQTARPQAPATV-GLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSA 112 G+ L E S P A V G A RA+DTFEA SP EL +V++ G + Sbjct: 44 GRVLAEDIVASYDLPPFDRAAVDGYAVRAEDTFEA----REYSPVEL-EVIEEVPIGENP 98 Query: 113 NEQAV 117 N++ + Sbjct: 99 NKEVI 103 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.316 0.133 0.383 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,676,840 Number of Sequences: 36641 Number of extensions: 177725 Number of successful extensions: 411 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 55 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 354 Number of HSP's gapped (non-prelim): 65 length of query: 118 length of database: 10,336,785 effective HSP length: 83 effective length of query: 35 effective length of database: 7,295,582 effective search space: 255345370 effective search space used: 255345370 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 52 (24.6 bits)