BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q15274
(297 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
5AYY-A nrPDB 592 e-170
4I9A-A nrPDB 473 e-134
3C2O-A nrPDB 250 6e-67
5HUL-A nrPDB 180 7e-46
1X1O-A nrPDB 166 8e-42
1O4U-A nrPDB 155 2e-38
3TQV-A nrPDB 150 5e-37
3PAJ-A nrPDB 149 1e-36
3GNN-A nrPDB 147 5e-36
1QAP-A nrPDB 147 7e-36
2B7N-A nrPDB 144 4e-35
1QPQ-A nrPDB 130 7e-31
3L0G-A nrPDB 107 4e-24
2V81-A nrPDB 34 0.076
6NT5-A nrPDB 32 0.26
4QCC-A nrPDB 32 0.48
3O15-A nrPDB 30 1.4
3OVQ-A nrPDB 29 2.1
5ZI1-A nrPDB 29 2.2
4AF0-B nrPDB 28 4.1
3QE3-A nrPDB 28 4.9
6AO8-A nrPDB 27 8.0
3LOT-A nrPDB 27 8.1
>5AYY-A nrPDB
Length = 305
Score = 592 bits (1526), Expect = e-170, Method: Compositional matrix adjust.
Identities = 296/297 (99%), Positives = 296/297 (99%)
Query: 1 MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF 60
MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF
Sbjct: 1 MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF 60
Query: 61 DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA 120
DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA
Sbjct: 61 DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA 120
Query: 121 AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG 180
AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG
Sbjct: 121 AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG 180
Query: 181 VEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF 240
VEKAVRAARQAADF LKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF
Sbjct: 181 VEKAVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF 240
Query: 241 PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPKIH 297
PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPKIH
Sbjct: 241 PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPKIH 297
>4I9A-A nrPDB
Length = 288
Score = 473 bits (1218), Expect = e-134, Method: Compositional matrix adjust.
Identities = 250/288 (86%), Positives = 268/288 (93%)
Query: 1 MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF 60
MD EGLALLLPP TLA L DSWLREDCPGLN ALV+GA PSQA LWAKSPG+LAG+PFF
Sbjct: 1 MDPEGLALLLPPATLATLADSWLREDCPGLNPVALVTGAAPSQAVLWAKSPGILAGRPFF 60
Query: 61 DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA 120
DAIF Q+NCQVSWFLPEGSKLVPVA+VAEVRGPAHCLLLGERVALN LARCSG+ASAAA
Sbjct: 61 DAIFAQVNCQVSWFLPEGSKLVPVAKVAEVRGPAHCLLLGERVALNMLARCSGVASAAAT 120
Query: 121 AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG 180
AVE ARG GW GHVAGTRKTTPGFRLVEKYGLLVGGA SHRYDLGGLVMVKDNHVVAAGG
Sbjct: 121 AVETARGTGWAGHVAGTRKTTPGFRLVEKYGLLVGGATSHRYDLGGLVMVKDNHVVAAGG 180
Query: 181 VEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF 240
V++AV+ AR+AA+F LKVEVECSSLQEA++AAEAGADLVLLDNF+PEELHPTA LKAQF
Sbjct: 181 VKQAVQGARRAANFALKVEVECSSLQEALEAAEAGADLVLLDNFRPEELHPTAAALKAQF 240
Query: 241 PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAK 288
P+V VEASGG+TLDNLPQFCGPHIDVIS+GMLTQAAPALDFSLKLFA+
Sbjct: 241 PTVGVEASGGVTLDNLPQFCGPHIDVISLGMLTQAAPALDFSLKLFAE 288
>3C2O-A nrPDB
Length = 294
Score = 250 bits (638), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/276 (45%), Positives = 167/276 (60%), Gaps = 9/276 (3%)
Query: 19 VDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSWFLPEG 78
V +WL ED P ++ V G+ +A L+ K G+L G PF +F Q QV W EG
Sbjct: 17 VTNWLSEDVPSFDFGGYVVGSDLKEANLYCKQDGMLCGVPFAQEVFNQCELQVEWLFKEG 76
Query: 79 SKLVPVAR------VAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTG 132
S L P VA++ GPA +LL ER ALN L+R SGIA+A+ + AR G+ G
Sbjct: 77 SFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKG 136
Query: 133 HVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAA 192
+AGTRKTTPG R +EKY +LVGG +HRYDL +VM+KDNH+ A G + AV+ AR
Sbjct: 137 TIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVC 196
Query: 193 DFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF---PSVAVEASG 249
F +K+EVEC S EA +A EAGAD+++LDNFK + L A LK ++ +E SG
Sbjct: 197 GFAVKIEVECLSEDEATEAIEAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSG 256
Query: 250 GITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
G+ LDNL ++ ID+ S + Q P +DFSLKL
Sbjct: 257 GLNLDNLEEYLCDDIDIYSTSSIHQGTPVIDFSLKL 292
>5HUL-A nrPDB
Length = 314
Score = 180 bits (456), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 10/280 (3%)
Query: 10 LPPVTLAALVDSWLREDCPGLNYA--ALVSGAGPSQAALWAKSPGVLAGQPFFDAIFT-- 65
L P + + + LRED +Y+ A+ G ++ +L+AK GVLAG F +FT
Sbjct: 33 LTPFQIDDTLKAALREDVHSEDYSTNAIFDHHGQAKVSLFAKEAGVLAGLTVFQRVFTLF 92
Query: 66 -QLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEA 124
++ Q +G +L V E+ G LL ERVALN L SGIAS AA VEA
Sbjct: 93 DEVTFQNPHQFKDGDRLTSGDLVLEIIGSVRSLLTCERVALNFLQHLSGIASMTAAYVEA 152
Query: 125 ARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKA 184
V TRKTTP RL EKY + VGG +HR++L +M+KDNH+ A G V+KA
Sbjct: 153 LGDDRIK--VFDTRKTTPNLRLFEKYAVRVGGGYNHRFNLSDAIMLKDNHIAAVGSVQKA 210
Query: 185 VRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVA 244
+ AR A F VEVE SL A +AA AG D+++LDN E++ T++ +
Sbjct: 211 IAQARAYAPFVKMVEVEVESLAAAEEAAAAGVDIIMLDNMSLEQIEQAITLIAGR---SR 267
Query: 245 VEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLK 284
+E SG I + + +F G ID +S G LT +A +LDFS+K
Sbjct: 268 IECSGNIDMTTISRFRGLAIDYVSSGSLTHSAKSLDFSMK 307
>1X1O-A nrPDB
Length = 286
Score = 166 bits (421), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 116/267 (43%), Positives = 156/267 (58%), Gaps = 9/267 (3%)
Query: 21 SWLREDCPGLNYAAL--VSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSW--FLP 76
+WLRED + +L V +A + AK GVLAG + +F + + ++ +
Sbjct: 20 AWLREDLGQGDLTSLLVVPEDLEGEAVILAKEGGVLAGLWVAERVFALADPRTAFTPLVA 79
Query: 77 EGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAG 136
EG+++ VA VRGP +L GER+ALN L R SGIA+ A VEA AG +
Sbjct: 80 EGARVAEGTEVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEAL--AGTKAQILD 137
Query: 137 TRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFTL 196
TRKTTPG R +EKY + VGG +HRY L +++K+NHV AAGGV +AVR A+ A L
Sbjct: 138 TRKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAAGGVGEAVRRAKARAPHYL 197
Query: 197 KVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNL 256
KVEVE SL+E +A EAGADL+LLDNF E L + + P +EASG +TL+
Sbjct: 198 KVEVEVRSLEELEEALEAGADLILLDNFPLEALREAVRRVGGRVP---LEASGNMTLERA 254
Query: 257 PQFCGPHIDVISMGMLTQAAPALDFSL 283
+D +S+G LT +A ALD SL
Sbjct: 255 KAAAEAGVDYVSVGALTHSAKALDLSL 281
>1O4U-A nrPDB
Length = 285
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 146/269 (54%), Gaps = 5/269 (1%)
Query: 18 LVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSWF-LP 76
L+ S+++ED L+ A+ + A L K+ V+A +F + +S F +
Sbjct: 19 LLMSFVKEDEGKLDLASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKMGLLSKFNVE 78
Query: 77 EGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAG 136
+G L + E+ G + LL+ ER LN L+ +A+ E + A +A
Sbjct: 79 DGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHA----KIAA 134
Query: 137 TRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFTL 196
TRK PG +++K ++ GG HR DL G VM+KDNH+ G E+AV+ R+ FT
Sbjct: 135 TRKILPGLGVLQKIAVVHGGGDPHRLDLSGCVMIKDNHLKMYGSAERAVQEVRKIIPFTT 194
Query: 197 KVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNL 256
K+EVE +L++A++A EAGAD+V+LDN PEE+ + +K P+V VE SGGIT +N+
Sbjct: 195 KIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITEENV 254
Query: 257 PQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+ +DVIS LT +D SL++
Sbjct: 255 SLYDFETVDVISSSRLTLQEVFVDLSLEI 283
>3TQV-A nrPDB
Length = 287
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 146/278 (52%), Gaps = 8/278 (2%)
Query: 10 LPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQL-- 67
+P + LV L ED + A ++ + A + +L GQ F + + QL
Sbjct: 14 VPNDIVTRLVRESLAEDIATGDITAQLAEDIDTTAFCITREEMILCGQDFANEVINQLDK 73
Query: 68 NCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARG 127
N Q++W + K+ AR+ E++G +L ER LN + SG A+ V+
Sbjct: 74 NIQITWLYSDAQKVPANARIFELKGNVRSILTAERTILNFIQMLSGTATVTNKLVKLI-- 131
Query: 128 AGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRA 187
+ + + TRKT PGFRL +KY + GG +HR L ++K+NH+ +AGG+ KAV
Sbjct: 132 SQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTK 191
Query: 188 ARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEA 247
A++ D VEVE ++L E QA A AD+V+LDNF E++ ++ + + VA+E
Sbjct: 192 AKK-LDSNKVVEVEVTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSIARGK---VALEV 247
Query: 248 SGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
SG I +++ +D IS+G +T+ A+D SL++
Sbjct: 248 SGNIDRNSIVAIAKTGVDFISVGAITKHIKAIDLSLQV 285
>3PAJ-A nrPDB
Length = 320
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/284 (35%), Positives = 150/284 (52%), Gaps = 15/284 (5%)
Query: 10 LPPVTLAALVDSWLREDCPGL------NYAALVSGAGPSQAALWAKSPGVLAGQPFFDAI 63
LP +++D+ L+ED G A+L+ S A + + GV GQ + D +
Sbjct: 42 LPADITRSVIDT-LKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEV 100
Query: 64 FTQLNCQVS--WFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAA 121
F QL QVS W + +G L P + + GPA LL GER A+N + SG A+A A
Sbjct: 101 FKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARY 160
Query: 122 VEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGV 181
V+ +G + TRKT PG R KY + GG +HR + ++K+NH++A GG+
Sbjct: 161 VQELKGTQC--RLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGI 218
Query: 182 EKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFP 241
+A+ A+Q + VEVE +L E +A AGAD+++LDNF E + +K
Sbjct: 219 RQAISTAKQ-LNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMRE---AVKINAG 274
Query: 242 SVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
A+E SG ITLDNL + +D IS+G LT+ ALD S++
Sbjct: 275 RAALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRF 318
>3GNN-A nrPDB
Length = 298
Score = 147 bits (371), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 96/266 (36%), Positives = 141/266 (53%), Gaps = 9/266 (3%)
Query: 23 LREDC-PGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLN--CQVSWFLPEGS 79
L ED G LV P +A + + VL G P+FDA+ ++ +V W EG
Sbjct: 37 LAEDVGSGDQTGRLVPDGAPRRARVIVREDAVLCGVPWFDAVVRAVDPSIEVDWRHREGD 96
Query: 80 KLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRK 139
++ + V E+RGPA LL ER ALN L SG+ASA V+ R A + TRK
Sbjct: 97 RMSADSTVCELRGPARALLTAERNALNFLQLLSGVASATRQYVD--RIADTRARILDTRK 154
Query: 140 TTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFTLKVE 199
T PG RL +KY + VGG A+ R L +++K+NH+ AAGGV +A+ AA A + + V+
Sbjct: 155 TLPGLRLAQKYAVRVGGGANQRLALYAGILIKENHIAAAGGVGEALDAA-FALNAEVPVQ 213
Query: 200 VECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQF 259
+E +L + A GA VLLDNF + + V + + +E SGG+ D +
Sbjct: 214 IEVETLDQLRTALAHGARSVLLDNFTLDMMRDAVRVTEGR---AVLEVSGGVNFDTVRAI 270
Query: 260 CGPHIDVISMGMLTQAAPALDFSLKL 285
+D IS+G LT+ A D+S+++
Sbjct: 271 AETGVDRISIGALTKDVRATDYSMRI 296
>1QAP-A nrPDB
Length = 296
Score = 147 bits (370), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/260 (34%), Positives = 137/260 (52%), Gaps = 17/260 (6%)
Query: 33 AALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQL---NCQVSWFLPEGSKLVPVARVAE 89
A L+ + A + + GV G+ + + +F QL + +++W + +G + V E
Sbjct: 46 AQLLPADTQAHATVITREDGVFCGKRWVEEVFIQLAGDDVRLTWHVDDGDAIHANQTVFE 105
Query: 90 VRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEK 149
++GPA LL GER ALN + SG+AS V AG + TRKT PG R K
Sbjct: 106 LQGPARVLLTGERTALNFVQTLSGVASEVRRYVGLL--AGTQTQLLDTRKTLPGLRTALK 163
Query: 150 YGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFTLK----VEVECSSL 205
Y +L GG A+HR L ++K+NH++A+G V +AV A F L VEVE +L
Sbjct: 164 YAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAVEKA-----FWLHPDVPVEVEVENL 218
Query: 206 QEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHID 265
E A +AGAD+++LDNF +++ + Q +E SG +T + L +F +D
Sbjct: 219 DELDDALKAGADIIMLDNFNTDQMREAVKRVNGQ---ARLEVSGNVTAETLREFAETGVD 275
Query: 266 VISMGMLTQAAPALDFSLKL 285
IS+G LT+ ALD S++
Sbjct: 276 FISVGALTKHVRALDLSMRF 295
>2B7N-A nrPDB
Length = 273
Score = 144 bits (364), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 137/274 (50%), Gaps = 3/274 (1%)
Query: 13 VTLAALVDSWLREDC-PGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQV 71
+ + ++ L+ED G + ++ + A + AK GV +G+ + + +
Sbjct: 1 MEIRTFLERALKEDLGHGDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLEMTGIEC 60
Query: 72 SWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWT 131
+ + + P + E+RG LL ER LN L SGIA+ + VEA
Sbjct: 61 VQTIKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKV- 119
Query: 132 GHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQA 191
+ TRKT P R+ EKY +L GGA++HR L +M+KD H+ ++ + AR+
Sbjct: 120 -RLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
Query: 192 ADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGI 251
FT K+E+EC S +EA A AGAD+V+ DN E A A +P V +EASG I
Sbjct: 179 LPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGNI 238
Query: 252 TLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+L+++ + +D IS+G L A +D +K+
Sbjct: 239 SLESINAYAKSGVDAISVGALIHQATFIDMHMKM 272
>1QPQ-A nrPDB
Length = 284
Score = 130 bits (327), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/273 (33%), Positives = 135/273 (49%), Gaps = 16/273 (5%)
Query: 23 LREDC---PGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLN-------CQVS 72
L ED P + A V + + A+L + GV+AG D LN +V
Sbjct: 18 LDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAG---LDVALLTLNEVLGTNGYRVL 74
Query: 73 WFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTG 132
+ +G+++ P + + LL ER LN + SGIA+A AA V+A RG
Sbjct: 75 DRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGT--KA 132
Query: 133 HVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAA 192
+ TRKT PG R ++KY + GG +HR LG ++KDNHV AAG V A+RA R AA
Sbjct: 133 KIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAA 192
Query: 193 DFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGIT 252
L EVE SL++ +L+LLDNF + ++ P+V +E+SGG++
Sbjct: 193 P-DLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLS 251
Query: 253 LDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
L + +D +++G LT + LD L +
Sbjct: 252 LQTAATYAETGVDYLAVGALTHSVRVLDIGLDM 284
>3L0G-A nrPDB
Length = 300
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 116/246 (47%), Gaps = 14/246 (5%)
Query: 45 ALWAKSPGVLAGQPFFDAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLL--GER 102
A+ + V+ G P + +F V + + + + V G A + L ER
Sbjct: 58 AINTRENLVVCGIPILEEVFNMNKEHVKYEIHKKDGDITGKNSTLVSGEALAIYLLPIER 117
Query: 103 VALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRY 162
V LN + SGIAS V+ G + TRKTTPG R+++KY + +GG S+R
Sbjct: 118 VILNFIQHASGIASITRQFVDEVSGTKV--KIRSTRKTTPGLRMLDKYSVCIGGGESYRD 175
Query: 163 DLGGLVMVKDNHVVAAGGVEKAVRAARQAADFTLKVE---VECSSLQEAVQAAEAGADLV 219
+L V++KDNH+ + G + A++ R+ LK E +EC ++ + ++ D++
Sbjct: 176 NLCDGVLIKDNHIASCGSITLAIQRLRK----NLKNEYIAIECDNISQVEESLSNNVDMI 231
Query: 220 LLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPAL 279
LLDN E+ ++ + +E SG + + N+ +D IS+G +T +
Sbjct: 232 LLDNMSISEIKKAVDIVNGKS---VLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQNK 288
Query: 280 DFSLKL 285
D L +
Sbjct: 289 DIGLDI 294
>2V81-A nrPDB
Length = 212
Score = 34.3 bits (77), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 189 RQAADFTLKVEVECSSLQEAVQAAEAGADLVLL---DNFKPEELHPTATVLKAQFPS-VA 244
R+A + + V C++ EA A EAGA + + F P+ + LKA PS +A
Sbjct: 95 RRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIK----ALKAVLPSDIA 150
Query: 245 VEASGGITLDNLPQF 259
V A GG+T +NL Q+
Sbjct: 151 VFAVGGVTPENLAQW 165
>6NT5-A nrPDB
Length = 385
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 72/188 (38%), Gaps = 27/188 (14%)
Query: 98 LLGERVALNTLARCSGIASAAAAAV------EAARGAGWTGHVAGTRKTTPGFR-----L 146
LLG ALN L G+A A +AV A G W+ ++ R P +
Sbjct: 123 LLGLSQALNILLGLKGLAPAEISAVCEKGNFNVAHGLAWSYYIGYLRLILPELQARIRTY 182
Query: 147 VEKYGLLVGGAASHR-YDLGGL-VMVKDNHVVAAGGVEKAVRAARQAADFT-LKVEVECS 203
+ Y L+ GA S R Y L L V DN +A + + +Q D +K V +
Sbjct: 183 NQHYNNLLRGAVSQRLYILLPLDCGVPDNLSMADPNIRFLDKLPQQTGDRAGIKDRVYSN 242
Query: 204 SLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQ---FC 260
S+ E ++ + VL AT L+ F +G D L Q FC
Sbjct: 243 SIYELLENGQRAGTCVL----------EYATPLQTLFAMSQYSQAGFSREDRLEQAKLFC 292
Query: 261 GPHIDVIS 268
D+++
Sbjct: 293 RTLEDILA 300
>4QCC-A nrPDB
Length = 291
Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 8/75 (10%)
Query: 189 RQAADFTLKVEVECSSLQEAVQAAEAGADLVLL---DNFKPEELHPTATVLKAQFPS-VA 244
R+A + + V C++ EA A EAGA + + F P+ + LKA PS +A
Sbjct: 95 RRAVGYGMTVCPGCATATEAFTALEAGAQALKIFPSSAFGPQYIK----ALKAVLPSDIA 150
Query: 245 VEASGGITLDNLPQF 259
V A GG+T +NL Q+
Sbjct: 151 VFAVGGVTPENLAQW 165
>3O15-A nrPDB
Length = 235
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 13/117 (11%)
Query: 183 KAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTA--------- 233
K VRAA D L V ++ E QA E GAD V L P E
Sbjct: 116 KEVRAA--IGDMILGVS--AHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLI 171
Query: 234 TVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEV 290
++ Q S+ + GGIT+DN D +SM A + + + F +E+
Sbjct: 172 EAVRRQGISIPIVGIGGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFREEI 228
>3OVQ-A nrPDB
Length = 228
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 227 EELHPTATVLKAQFPSVAVEASGGITLDNL 256
E++ P L+ QFPS+ +E GG+ D +
Sbjct: 154 EDMMPKVHWLRTQFPSLDIEVDGGVGPDTV 183
>5ZI1-A nrPDB
Length = 609
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 17/39 (43%)
Query: 126 RGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDL 164
R A WTGH T+ T YG G SH +DL
Sbjct: 311 RFAIWTGHSVVTQYTKSTTENTFNYGTSSGSTLSHTFDL 349
>4AF0-B nrPDB
Length = 556
Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 212 AEAGADLVLLDNFKPEELHPTATV--LKAQFPSVAVEASGGITLDNLPQFCGPHIDVISM 269
AEAG D+V+LD+ + ++ + +K +P + V A +T + Q D + +
Sbjct: 290 AEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVTREQAAQLIAAGADGLRI 349
Query: 270 GM 271
GM
Sbjct: 350 GM 351
>3QE3-A nrPDB
Length = 355
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Query: 210 QAAEAGADLVL-LDNFKPEELHPTATVLKAQFPSVAVEASG 249
+A E GAD +L + N PEE+ L P V +E +G
Sbjct: 210 KAKEVGADFILEISNESPEEIAKKVEGLLGSKPEVTIECTG 250
>6AO8-A nrPDB
Length = 580
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 205 LQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQ 239
+Q+ + + GA +V LD FK +E P A +++ Q
Sbjct: 280 VQKGLAVEDDGAKVVFLDEFKNKEGEPAAFIVQKQ 314
>3LOT-A nrPDB
Length = 314
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 205 LQEAVQAAEAGADLVLLDNFKPEELHPTATV 235
++EAV+AAEAGA +V + P++ PT V
Sbjct: 35 VEEAVKAAEAGAGMVHIHARDPKDGRPTTDV 65
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
5AYY-A nrPDB 418 e-117
4I9A-A nrPDB 358 2e-99
3C2O-A nrPDB 341 3e-94
3PAJ-A nrPDB 321 2e-88
2B7N-A nrPDB 316 1e-86
1QAP-A nrPDB 314 3e-86
3TQV-A nrPDB 314 3e-86
5HUL-A nrPDB 311 2e-85
3GNN-A nrPDB 291 2e-79
1O4U-A nrPDB 285 2e-77
1X1O-A nrPDB 282 1e-76
1QPQ-A nrPDB 282 1e-76
3L0G-A nrPDB 276 7e-75
Sequences not found previously or not previously below threshold:
2I14-A nrPDB 60 1e-09
1XI3-A nrPDB 38 0.004
1YTE-A nrPDB 36 0.017
5UQG-A nrPDB 35 0.038
1ZFJ-A nrPDB 34 0.061
3O15-A nrPDB 33 0.16
3T55-A nrPDB 33 0.18
4FXS-A nrPDB 33 0.19
3OVQ-A nrPDB 33 0.21
3QE3-A nrPDB 32 0.42
4QJ1-A nrPDB 32 0.45
3F4W-A nrPDB 31 0.54
6I0M-A nrPDB 31 0.58
3FFS-A nrPDB 31 0.59
1VRD-A nrPDB 31 0.68
4FEZ-A nrPDB 30 1.1
2F7F-A nrPDB 30 1.6
4DZA-A nrPDB 30 1.8
6HUL-A nrPDB 29 2.3
1JCN-A nrPDB 29 3.2
2JFH-A nrPDB 28 4.0
4LPS-A nrPDB 28 4.1
5UMF-A nrPDB 28 4.6
1V77-A nrPDB 28 4.6
6BMA-A nrPDB 28 5.4
1H1Z-A nrPDB 28 6.1
3INP-A nrPDB 28 6.2
4YUB-A nrPDB 28 7.2
2I71-A nrPDB 27 7.5
3Q94-A nrPDB 27 7.7
6MWQ-A nrPDB 27 8.3
>5AYY-A nrPDB
Length = 305
Score = 418 bits (1075), Expect = e-117, Method: Composition-based stats.
Identities = 296/297 (99%), Positives = 296/297 (99%)
Query: 1 MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF 60
MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF
Sbjct: 1 MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF 60
Query: 61 DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA 120
DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA
Sbjct: 61 DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA 120
Query: 121 AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG 180
AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG
Sbjct: 121 AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG 180
Query: 181 VEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF 240
VEKAVRAARQAADF LKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF
Sbjct: 181 VEKAVRAARQAADFALKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF 240
Query: 241 PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPKIH 297
PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPKIH
Sbjct: 241 PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPKIH 297
>4I9A-A nrPDB
Length = 288
Score = 358 bits (918), Expect = 2e-99, Method: Composition-based stats.
Identities = 250/288 (86%), Positives = 268/288 (93%)
Query: 1 MDAEGLALLLPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF 60
MD EGLALLLPP TLA L DSWLREDCPGLN ALV+GA PSQA LWAKSPG+LAG+PFF
Sbjct: 1 MDPEGLALLLPPATLATLADSWLREDCPGLNPVALVTGAAPSQAVLWAKSPGILAGRPFF 60
Query: 61 DAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAA 120
DAIF Q+NCQVSWFLPEGSKLVPVA+VAEVRGPAHCLLLGERVALN LARCSG+ASAAA
Sbjct: 61 DAIFAQVNCQVSWFLPEGSKLVPVAKVAEVRGPAHCLLLGERVALNMLARCSGVASAAAT 120
Query: 121 AVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGG 180
AVE ARG GW GHVAGTRKTTPGFRLVEKYGLLVGGA SHRYDLGGLVMVKDNHVVAAGG
Sbjct: 121 AVETARGTGWAGHVAGTRKTTPGFRLVEKYGLLVGGATSHRYDLGGLVMVKDNHVVAAGG 180
Query: 181 VEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF 240
V++AV+ AR+AA+F LKVEVECSSLQEA++AAEAGADLVLLDNF+PEELHPTA LKAQF
Sbjct: 181 VKQAVQGARRAANFALKVEVECSSLQEALEAAEAGADLVLLDNFRPEELHPTAAALKAQF 240
Query: 241 PSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAK 288
P+V VEASGG+TLDNLPQFCGPHIDVIS+GMLTQAAPALDFSLKLFA+
Sbjct: 241 PTVGVEASGGVTLDNLPQFCGPHIDVISLGMLTQAAPALDFSLKLFAE 288
>3C2O-A nrPDB
Length = 294
Score = 341 bits (874), Expect = 3e-94, Method: Composition-based stats.
Identities = 126/276 (45%), Positives = 167/276 (60%), Gaps = 9/276 (3%)
Query: 19 VDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSWFLPEG 78
V +WL ED P ++ V G+ +A L+ K G+L G PF +F Q QV W EG
Sbjct: 17 VTNWLSEDVPSFDFGGYVVGSDLKEANLYCKQDGMLCGVPFAQEVFNQCELQVEWLFKEG 76
Query: 79 SKLVPVAR------VAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTG 132
S L P VA++ GPA +LL ER ALN L+R SGIA+A+ + AR G+ G
Sbjct: 77 SFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKG 136
Query: 133 HVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAA 192
+AGTRKTTPG R +EKY +LVGG +HRYDL +VM+KDNH+ A G + AV+ AR
Sbjct: 137 TIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVC 196
Query: 193 DFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQF---PSVAVEASG 249
F +K+EVEC S EA +A EAGAD+++LDNFK + L A LK ++ +E SG
Sbjct: 197 GFAVKIEVECLSEDEATEAIEAGADVIMLDNFKGDGLKMCAQSLKNKWNGKKHFLLECSG 256
Query: 250 GITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
G+ LDNL ++ ID+ S + Q P +DFSLKL
Sbjct: 257 GLNLDNLEEYLCDDIDIYSTSSIHQGTPVIDFSLKL 292
>3PAJ-A nrPDB
Length = 320
Score = 321 bits (824), Expect = 2e-88, Method: Composition-based stats.
Identities = 101/284 (35%), Positives = 150/284 (52%), Gaps = 15/284 (5%)
Query: 10 LPPVTLAALVDSWLREDCPG------LNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAI 63
LP +++D+ L+ED G A+L+ S A + + GV GQ + D +
Sbjct: 42 LPADITRSVIDT-LKEDLGGTLDPAADITASLIPADRISTATIITREAGVFCGQLWADEV 100
Query: 64 FTQLNCQVS--WFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAA 121
F QL QVS W + +G L P + + GPA LL GER A+N + SG A+A A
Sbjct: 101 FKQLGGQVSIEWHVQDGDTLTPNQTLCTLTGPARILLTGERNAMNFIQTLSGCATATARY 160
Query: 122 VEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGV 181
V+ +G + TRKT PG R KY + GG +HR + ++K+NH++A GG+
Sbjct: 161 VQELKGTQC--RLLDTRKTIPGLRSALKYAVACGGGYNHRIGVFDAYLIKENHIIACGGI 218
Query: 182 EKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFP 241
+A+ A+Q + VEVE +L E +A AGAD+++LDNF E + + +
Sbjct: 219 RQAISTAKQ-LNPGKPVEVETETLAELEEAISAGADIIMLDNFSLEMMREAVKINAGR-- 275
Query: 242 SVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
A+E SG ITLDNL + +D IS+G LT+ ALD S++
Sbjct: 276 -AALENSGNITLDNLKECAETGVDYISVGALTKHLKALDLSMRF 318
>2B7N-A nrPDB
Length = 273
Score = 316 bits (809), Expect = 1e-86, Method: Composition-based stats.
Identities = 86/274 (31%), Positives = 137/274 (50%), Gaps = 3/274 (1%)
Query: 13 VTLAALVDSWLREDC-PGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQV 71
+ + ++ L+ED G + ++ + A + AK GV +G+ + + +
Sbjct: 1 MEIRTFLERALKEDLGHGDLFERVLEKDFKATAFVRAKQEGVFSGEKYALELLEMTGIEC 60
Query: 72 SWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWT 131
+ + + P + E+RG LL ER LN L SGIA+ + VEA
Sbjct: 61 VQTIKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKV- 119
Query: 132 GHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQA 191
+ TRKT P R+ EKY +L GGA++HR L +M+KD H+ ++ + AR+
Sbjct: 120 -RLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
Query: 192 ADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGI 251
FT K+E+EC S +EA A AGAD+V+ DN E A A +P V +EASG I
Sbjct: 179 LPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGNI 238
Query: 252 TLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+L+++ + +D IS+G L A +D +K+
Sbjct: 239 SLESINAYAKSGVDAISVGALIHQATFIDMHMKM 272
>1QAP-A nrPDB
Length = 296
Score = 314 bits (805), Expect = 3e-86, Method: Composition-based stats.
Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 15/283 (5%)
Query: 12 PVTLAALVDSWLREDCPG------LNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFT 65
+ + A V LRED G A L+ + A + + GV G+ + + +F
Sbjct: 19 NLDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFI 78
Query: 66 QL---NCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAV 122
QL + +++W + +G + V E++GPA LL GER ALN + SG+AS V
Sbjct: 79 QLAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYV 138
Query: 123 EAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVE 182
AG + TRKT PG R KY +L GG A+HR L ++K+NH++A+G V
Sbjct: 139 GLL--AGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVR 196
Query: 183 KAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPS 242
+AV A + VEVE +L E A +AGAD+++LDNF +++ + Q
Sbjct: 197 QAVEKA-FWLHPDVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQ--- 252
Query: 243 VAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+E SG +T + L +F +D IS+G LT+ ALD S++
Sbjct: 253 ARLEVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMRF 295
>3TQV-A nrPDB
Length = 287
Score = 314 bits (804), Expect = 3e-86, Method: Composition-based stats.
Identities = 90/278 (32%), Positives = 146/278 (52%), Gaps = 8/278 (2%)
Query: 10 LPPVTLAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQL-- 67
+P + LV L ED + A ++ + A + +L GQ F + + QL
Sbjct: 14 VPNDIVTRLVRESLAEDIATGDITAQLAEDIDTTAFCITREEMILCGQDFANEVINQLDK 73
Query: 68 NCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARG 127
N Q++W + K+ AR+ E++G +L ER LN + SG A+ V+
Sbjct: 74 NIQITWLYSDAQKVPANARIFELKGNVRSILTAERTILNFIQMLSGTATVTNKLVKLI-- 131
Query: 128 AGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRA 187
+ + + TRKT PGFRL +KY + GG +HR L ++K+NH+ +AGG+ KAV
Sbjct: 132 SQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTK 191
Query: 188 ARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEA 247
A++ D VEVE ++L E QA A AD+V+LDNF E++ ++ + + VA+E
Sbjct: 192 AKK-LDSNKVVEVEVTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSIARGK---VALEV 247
Query: 248 SGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
SG I +++ +D IS+G +T+ A+D SL++
Sbjct: 248 SGNIDRNSIVAIAKTGVDFISVGAITKHIKAIDLSLQV 285
>5HUL-A nrPDB
Length = 314
Score = 311 bits (798), Expect = 2e-85, Method: Composition-based stats.
Identities = 112/280 (40%), Positives = 154/280 (55%), Gaps = 10/280 (3%)
Query: 10 LPPVTLAALVDSWLREDCPGLNYA--ALVSGAGPSQAALWAKSPGVLAGQPFFDAIFT-- 65
L P + + + LRED +Y+ A+ G ++ +L+AK GVLAG F +FT
Sbjct: 33 LTPFQIDDTLKAALREDVHSEDYSTNAIFDHHGQAKVSLFAKEAGVLAGLTVFQRVFTLF 92
Query: 66 -QLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEA 124
++ Q +G +L V E+ G LL ERVALN L SGIAS AA VEA
Sbjct: 93 DEVTFQNPHQFKDGDRLTSGDLVLEIIGSVRSLLTCERVALNFLQHLSGIASMTAAYVEA 152
Query: 125 ARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKA 184
V TRKTTP RL EKY + VGG +HR++L +M+KDNH+ A G V+KA
Sbjct: 153 LGDDRI--KVFDTRKTTPNLRLFEKYAVRVGGGYNHRFNLSDAIMLKDNHIAAVGSVQKA 210
Query: 185 VRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVA 244
+ AR A F VEVE SL A +AA AG D+++LDN E++ T++ +
Sbjct: 211 IAQARAYAPFVKMVEVEVESLAAAEEAAAAGVDIIMLDNMSLEQIEQAITLIAGRS---R 267
Query: 245 VEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLK 284
+E SG I + + +F G ID +S G LT +A +LDFS+K
Sbjct: 268 IECSGNIDMTTISRFRGLAIDYVSSGSLTHSAKSLDFSMK 307
>3GNN-A nrPDB
Length = 298
Score = 291 bits (745), Expect = 2e-79, Method: Composition-based stats.
Identities = 97/274 (35%), Positives = 144/274 (52%), Gaps = 9/274 (3%)
Query: 15 LAALVDSWLREDCPGLN-YAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLN--CQV 71
+A V L ED + LV P +A + + VL G P+FDA+ ++ +V
Sbjct: 29 IARNVADALAEDVGSGDQTGRLVPDGAPRRARVIVREDAVLCGVPWFDAVVRAVDPSIEV 88
Query: 72 SWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWT 131
W EG ++ + V E+RGPA LL ER ALN L SG+ASA V+ R A
Sbjct: 89 DWRHREGDRMSADSTVCELRGPARALLTAERNALNFLQLLSGVASATRQYVD--RIADTR 146
Query: 132 GHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQA 191
+ TRKT PG RL +KY + VGG A+ R L +++K+NH+ AAGGV +A+ AA A
Sbjct: 147 ARILDTRKTLPGLRLAQKYAVRVGGGANQRLALYAGILIKENHIAAAGGVGEALDAA-FA 205
Query: 192 ADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGI 251
+ + V++E +L + A GA VLLDNF + + V + + +E SGG+
Sbjct: 206 LNAEVPVQIEVETLDQLRTALAHGARSVLLDNFTLDMMRDAVRVTEGR---AVLEVSGGV 262
Query: 252 TLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
D + +D IS+G LT+ A D+S+++
Sbjct: 263 NFDTVRAIAETGVDRISIGALTKDVRATDYSMRI 296
>1O4U-A nrPDB
Length = 285
Score = 285 bits (729), Expect = 2e-77, Method: Composition-based stats.
Identities = 94/272 (34%), Positives = 147/272 (54%), Gaps = 5/272 (1%)
Query: 15 LAALVDSWLREDCPGLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSWF 74
+ L+ S+++ED L+ A+ + A L K+ V+A +F + +S F
Sbjct: 16 ILDLLMSFVKEDEGKLDLASFPLRNTTAGAHLLLKTENVVASGIEVSRMFLEKMGLLSKF 75
Query: 75 -LPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGH 133
+ +G L + E+ G + LL+ ER LN L+ +A+ E + A
Sbjct: 76 NVEDGEYLEGTGVIGEIEGNTYKLLVAERTLLNVLSVMFSVATTTRRFAEKLKHA----K 131
Query: 134 VAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAAD 193
+A TRK PG +++K ++ GG HR DL G VM+KDNH+ G E+AV+ R+
Sbjct: 132 IAATRKILPGLGVLQKIAVVHGGGDPHRLDLSGCVMIKDNHLKMYGSAERAVQEVRKIIP 191
Query: 194 FTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITL 253
FT K+EVE +L++A++A EAGAD+V+LDN PEE+ + +K P+V VE SGGIT
Sbjct: 192 FTTKIEVEVENLEDALRAVEAGADIVMLDNLSPEEVKDISRRIKDINPNVIVEVSGGITE 251
Query: 254 DNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+N+ + +DVIS LT +D SL++
Sbjct: 252 ENVSLYDFETVDVISSSRLTLQEVFVDLSLEI 283
>1X1O-A nrPDB
Length = 286
Score = 282 bits (722), Expect = 1e-76, Method: Composition-based stats.
Identities = 117/273 (42%), Positives = 158/273 (57%), Gaps = 9/273 (3%)
Query: 15 LAALVDSWLREDCPGLNYAAL--VSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVS 72
L + +WLRED + +L V +A + AK GVLAG + +F + + +
Sbjct: 14 LEEALRAWLREDLGQGDLTSLLVVPEDLEGEAVILAKEGGVLAGLWVAERVFALADPRTA 73
Query: 73 W--FLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGW 130
+ + EG+++ VA VRGP +L GER+ALN L R SGIA+ A VEA AG
Sbjct: 74 FTPLVAEGARVAEGTEVARVRGPLRGILAGERLALNLLQRLSGIATLTRAYVEAL--AGT 131
Query: 131 TGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQ 190
+ TRKTTPG R +EKY + VGG +HRY L +++K+NHV AAGGV +AVR A+
Sbjct: 132 KAQILDTRKTTPGLRALEKYAVRVGGGRNHRYGLFDGILLKENHVRAAGGVGEAVRRAKA 191
Query: 191 AADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGG 250
A LKVEVE SL+E +A EAGADL+LLDNF E L + + P +EASG
Sbjct: 192 RAPHYLKVEVEVRSLEELEEALEAGADLILLDNFPLEALREAVRRVGGRVP---LEASGN 248
Query: 251 ITLDNLPQFCGPHIDVISMGMLTQAAPALDFSL 283
+TL+ +D +S+G LT +A ALD SL
Sbjct: 249 MTLERAKAAAEAGVDYVSVGALTHSAKALDLSL 281
>1QPQ-A nrPDB
Length = 284
Score = 282 bits (721), Expect = 1e-76, Method: Composition-based stats.
Identities = 88/270 (32%), Positives = 134/270 (49%), Gaps = 10/270 (3%)
Query: 23 LREDC---PGLNYAALVSGAGPSQAALWAKSPGVLAGQPFF----DAIFTQLNCQVSWFL 75
L ED P + A V + + A+L + GV+AG + + +V +
Sbjct: 18 LDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNGYRVLDRV 77
Query: 76 PEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVA 135
+G+++ P + + LL ER LN + SGIA+A AA V+A RG +
Sbjct: 78 EDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGT--KAKIR 135
Query: 136 GTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFT 195
TRKT PG R ++KY + GG +HR LG ++KDNHV AAG V A+RA R AA
Sbjct: 136 DTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRNAAP-D 194
Query: 196 LKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDN 255
L EVE SL++ +L+LLDNF + ++ P+V +E+SGG++L
Sbjct: 195 LPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGGLSLQT 254
Query: 256 LPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+ +D +++G LT + LD L +
Sbjct: 255 AATYAETGVDYLAVGALTHSVRVLDIGLDM 284
>3L0G-A nrPDB
Length = 300
Score = 276 bits (706), Expect = 7e-75, Method: Composition-based stats.
Identities = 68/274 (24%), Positives = 124/274 (45%), Gaps = 10/274 (3%)
Query: 16 AALVDSWLREDCP--GLNYAALVSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSW 73
+ ++ + L+ED G + A+ + V+ G P + +F V +
Sbjct: 27 SEIIHNALKEDLGDKGDITTNSILINEKVNFAINTRENLVVCGIPILEEVFNMNKEHVKY 86
Query: 74 FLPEGSKLVPVARVAEVRGPAHCLLL--GERVALNTLARCSGIASAAAAAVEAARGAGWT 131
+ + + V G A + L ERV LN + SGIAS V+ G
Sbjct: 87 EIHKKDGDITGKNSTLVSGEALAIYLLPIERVILNFIQHASGIASITRQFVDEVSGTKV- 145
Query: 132 GHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQA 191
+ TRKTTPG R+++KY + +GG S+R +L V++KDNH+ + G + A++ R+
Sbjct: 146 -KIRSTRKTTPGLRMLDKYSVCIGGGESYRDNLCDGVLIKDNHIASCGSITLAIQRLRKN 204
Query: 192 ADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGI 251
+ +EC ++ + ++ D++LLDN E+ ++ + +E SG +
Sbjct: 205 LK-NEYIAIECDNISQVEESLSNNVDMILLDNMSISEIKKAVDIVNGKS---VLEVSGCV 260
Query: 252 TLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKL 285
+ N+ +D IS+G +T + D L +
Sbjct: 261 NIRNVRNIALTGVDYISIGCITNSFQNKDIGLDI 294
>2I14-A nrPDB
Length = 395
Score = 60.4 bits (145), Expect = 1e-09, Method: Composition-based stats.
Identities = 57/287 (19%), Positives = 99/287 (34%), Gaps = 37/287 (12%)
Query: 36 VSGAGPSQAALWAKSPGVLAGQPFFDAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAH 95
V + + GVL G + + V + +PEG+ P V ++ G
Sbjct: 44 VLADVTTTSLPNNWRWGVLVGVEEVAKLLEGIPVNV-YAMPEGTIFHPYEPVLQIEGDYA 102
Query: 96 CLLLGERVALNTLARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVG 155
+ E L L++ SGIA+AA AA+ G R P + +G
Sbjct: 103 DFGIYETALLGMLSQASGIATAALRIKIAAKFKPVYS--FGIRHMHPAIAPMIDRAAFIG 160
Query: 156 GAASHRYDLGGLVMVKDNHVVAAGGVEKAV-----RAARQAADFTLKVEVECSSLQEAVQ 210
G + G M+ + A G + A+ + F +E E +
Sbjct: 161 GCDGVS-GVLGAEMMGE---KAVGTMPHALIITVGDQVKAWKYFDEVIEEEVPRIALVDT 216
Query: 211 AAEAGADLVL-------------LD-------NFK--PEELHPTATVLKAQFPSVAVEAS 248
+ + V+ LD NF+ EE+ V + V + S
Sbjct: 217 FYDEKVEAVMAAEALGKKLFAVRLDTPSSRRGNFRKIIEEVRWELKVRG--YDWVKIFVS 274
Query: 249 GGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFAKEVAPVPK 295
GG+ + + + +D +G +A +DF+L + E P+ K
Sbjct: 275 GGLDEEKIKEIVDV-VDAFGVGGAIASAKPVDFALDIVEVEGKPIAK 320
>1XI3-A nrPDB
Length = 215
Score = 38.5 bits (88), Expect = 0.004, Method: Composition-based stats.
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 8/92 (8%)
Query: 185 VRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVA 244
+ A++ A L + SL+EA++A + GAD + + P + A V+ +
Sbjct: 99 IEVAKEIAP-NLIIGASVYSLEEALEAEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKI 157
Query: 245 VE-------ASGGITLDNLPQFCGPHIDVISM 269
VE A GGI DN + +D I++
Sbjct: 158 VESVKIPVVAIGGINKDNAREVLKTGVDGIAV 189
>1YTE-A nrPDB
Length = 398
Score = 36.1 bits (82), Expect = 0.017, Method: Composition-based stats.
Identities = 43/268 (16%), Positives = 87/268 (32%), Gaps = 30/268 (11%)
Query: 54 LAGQPFFDAIFTQLNCQVSWFLPEGSKLVPVAR------VAEVRGPAHCLLLGERVALNT 107
G + L+ + + +PEG+ L P V G + E L
Sbjct: 60 FTGLDEVLKLLEGLDVDL-YAIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGF 118
Query: 108 LARCSGIASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGL 167
+ + SGI++ A+ AA + + G R+ P + +GGA + G
Sbjct: 119 ICQASGISTKASKVRLAAGDSPFFS--FGIRRMHPAISPMIDRSAYIGGADGVS-GILGA 175
Query: 168 VMVKDNHV--------VAAGGVEKAVRAARQAADFTLKVEVECSSLQEAVQAAE-----A 214
++ + V + G E + V + + + E A +
Sbjct: 176 KLIDQDPVGTMPHALSIMLGDEEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMFD 235
Query: 215 GADLVLLDNFKPEELHPTATVLKAQFPSVA-------VEASGGITLDNLPQFCGPHIDVI 267
D + LD + A + + ++ + SGG+ + + + +
Sbjct: 236 KVDYIRLDTPSSRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTVKKLREAGAEAF 295
Query: 268 SMGMLTQAAPALDFSLKLFAKEVAPVPK 295
+G +A DF++ + P K
Sbjct: 296 GVGTSISSAKPFDFAMDIVEVNGKPETK 323
>5UQG-A nrPDB
Length = 406
Score = 35.0 bits (79), Expect = 0.038, Method: Composition-based stats.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 200 VECSSLQEAVQAAEAGADLVLLDNFKP--EELHPTATVLKAQFPSVAVEASGGITLDNLP 257
+ + EAG D+V+LD+ + + T +KA++P++ + +G I
Sbjct: 143 IGVGQMDRVDALVEAGVDVVVLDSAHGHSKGIIDTVKAIKAKYPNLDL-IAGNIATAAAA 201
Query: 258 Q-FCGPHIDVISMG 270
+ C +D + +G
Sbjct: 202 KALCEAGVDAVKVG 215
>1ZFJ-A nrPDB
Length = 491
Score = 34.2 bits (77), Expect = 0.061, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 6/110 (5%)
Query: 164 LGGLVMVKDNHVVAAGGVEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDN 223
L GL+ +KD + A + V V + + A EAGAD +++D
Sbjct: 196 LSGLITIKD--IEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDT 253
Query: 224 FKPE--ELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMG 270
+ ++A FP+ + +G I T + +DV+ +G
Sbjct: 254 AHGHSAGVLRKIAEIRAHFPNRTL-IAGNIATAEGARALYDAGVDVVKVG 302
>3O15-A nrPDB
Length = 235
Score = 33.1 bits (74), Expect = 0.16, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 44/123 (35%), Gaps = 15/123 (12%)
Query: 180 GVEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELH--------- 230
G E A +AA + + V ++ E QA E GAD V L P E
Sbjct: 109 GQEDANAKEVRAAIGDMILGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGV 168
Query: 231 ---PTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGMLTQAAPALDFSLKLFA 287
P V + GGIT+DN D +SM A + + + F
Sbjct: 169 SLIEAVRRQGISIPIVGI---GGITIDNAAPVIQAGADGVSMISAISQAEDPESAARKFR 225
Query: 288 KEV 290
+E+
Sbjct: 226 EEI 228
>3T55-A nrPDB
Length = 272
Score = 32.7 bits (73), Expect = 0.18, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Query: 200 VECSSLQEAVQAAEAGADLVLL---DNFKPEELHPTATVLKAQFPSVAVEA--SGGITLD 254
VE + QEA +A +AGA ++ + D + + PS + SG
Sbjct: 167 VEVHTEQEADRALKAGAKVIGVNARDLMTLDVDRDCFARIAPGLPSSVIRIAESGVRGTA 226
Query: 255 NLPQFCGPHIDVISMG 270
+L + G D + +G
Sbjct: 227 DLLAYAGAGADAVLVG 242
>4FXS-A nrPDB
Length = 496
Score = 32.7 bits (73), Expect = 0.19, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 4/114 (3%)
Query: 159 SHRYDLGGLVMVKDNHVVAAGGVEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADL 218
+ + L G++ KD H A A + + V + + EAG D+
Sbjct: 189 NDEFQLKGMITAKDFH--KAESKPNACKDEQGRLRVGAAVGAAPGNEERVKALVEAGVDV 246
Query: 219 VLLDNFKPEELHPTATVLKAQFPSVAVEASGG--ITLDNLPQFCGPHIDVISMG 270
+L+D+ + + + +E GG T + + + +G
Sbjct: 247 LLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 300
>3OVQ-A nrPDB
Length = 228
Score = 32.7 bits (73), Expect = 0.21, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 226 PEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGM 271
E++ P L+ QFPS+ +E GG+ D + + ++I G
Sbjct: 153 MEDMMPKVHWLRTQFPSLDIEVDGGVGPDTVHKCAEAGANMIVSGS 198
>3QE3-A nrPDB
Length = 355
Score = 31.5 bits (70), Expect = 0.42, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 195 TLKVEVECSSLQEAVQAAEAGADLVL-LDNFKPEELHPTATVLKAQFPSVAVEASG 249
+V V S +A E GAD +L + N PEE+ L P V +E +G
Sbjct: 195 AAQVVVTDLSASRLSKAKEVGADFILEISNESPEEIAKKVEGLLGSKPEVTIECTG 250
>4QJ1-A nrPDB
Length = 361
Score = 31.5 bits (70), Expect = 0.45, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Query: 185 VRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVA 244
V + + + + + ++ A EAG D+++LD+ L+ T+ + +
Sbjct: 87 VLKVKNSGGLRVGAAIGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNI 146
Query: 245 VEASGG-ITLDNLPQFCGPHIDVISMG 270
G +T + + D I +G
Sbjct: 147 DVIVGNVVTEEATKELIENGADGIKVG 173
>3F4W-A nrPDB
Length = 211
Score = 31.1 bits (69), Expect = 0.54, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 47/104 (45%), Gaps = 9/104 (8%)
Query: 181 VEKAVRAARQAADFTLKVEVECSSLQEAVQAAE-AGADLVLLDNFKPEE------LHPTA 233
++ +RAA++A + + L V+ E AGAD++ + ++ +
Sbjct: 92 IQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVHTGTDQQAAGRKPIDDLI 151
Query: 234 TVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMG-MLTQAA 276
T+LK + + +GGI+ + + DV+ +G +T AA
Sbjct: 152 TMLKVRRK-ARIAVAGGISSQTVKDYALLGPDVVIVGSAITHAA 194
>6I0M-A nrPDB
Length = 517
Score = 31.1 bits (69), Expect = 0.58, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 2/90 (2%)
Query: 184 AVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPT--ATVLKAQFP 241
A + A++ + A+AG D+V+LD+ + + +K ++P
Sbjct: 239 ASKDAKKQLLCGAAIGTHEDDKYRLDLLAQAGVDVVVLDSSQGNSIFQINMIKYIKDKYP 298
Query: 242 SVAVEASGGITLDNLPQFCGPHIDVISMGM 271
++ V +T +D + +GM
Sbjct: 299 NLQVIGGNVVTAAQAKNLIDAGVDALRVGM 328
>3FFS-A nrPDB
Length = 400
Score = 31.1 bits (69), Expect = 0.59, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
Query: 200 VECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGG-ITLDNLPQ 258
+ + ++ A EAG D+++LD+ L+ T+ + + G +T + +
Sbjct: 141 IGVNEIERAKLLVEAGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKE 200
Query: 259 FCGPHIDVISMG 270
D I +G
Sbjct: 201 LIENGADGIKVG 212
>1VRD-A nrPDB
Length = 494
Score = 30.7 bits (68), Expect = 0.68, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 164 LGGLVMVKDNHVVAAGGVEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDN 223
L GL+ +KD +++ A R + V +++ + +AG D++++D
Sbjct: 200 LVGLITIKD--IMSVIEHPNAARDEKGRLLVGAAVGTSPETMERVEKLVKAGVDVIVIDT 257
Query: 224 FKPEELH--PTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISMG 270
T ++KA +P + V +G + T + D + +G
Sbjct: 258 AHGHSRRVIETLEMIKADYPDLPV-VAGNVATPEGTEALIKAGADAVKVG 306
>4FEZ-A nrPDB
Length = 388
Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 2/69 (2%)
Query: 204 SLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGG--ITLDNLPQFCG 261
+ + EAG D++L+D+ + + + +E GG T +
Sbjct: 131 NEERVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIE 190
Query: 262 PHIDVISMG 270
+ + +G
Sbjct: 191 AGVSAVKVG 199
>2F7F-A nrPDB
Length = 494
Score = 29.6 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 51/166 (30%), Gaps = 34/166 (20%)
Query: 77 EGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAAVEAA----------- 125
EG + + ++ GP L E LN + + IA+ AA
Sbjct: 104 EGDLVFNNEPLIQIEGPLAQCQLVETALLNMVNFQTLIATKAARIKSVIGDDPLLEFGTR 163
Query: 126 RGAGWTGHVAGTR-------KTTPGFRLVEKYGLLVGGAASHRYDLG------------- 165
R + GTR T R + +G+ V G +H
Sbjct: 164 RAQELDAAIWGTRAAYIGGADATSNVRAGKIFGIPVSGTHAHSLVQSYGNDYEAFMAYAK 223
Query: 166 ---GLVMVKDNHVVAAGGVEKAVRAARQAADFTLKVEVECSSLQEA 208
V + D + GV A+R AR+ D + V S A
Sbjct: 224 THRDCVFLVDTYDTLKAGVPSAIRVAREMGDKINFLGVRIDSGDMA 269
>4DZA-A nrPDB
Length = 407
Score = 29.6 bits (65), Expect = 1.8, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 2/116 (1%)
Query: 151 GLLVGGAASHRYDLGGLVMVKDNHVVAAG-GVEKAVRAARQAADFTLKVEVECSSLQEAV 209
+L G A H L +M+ +N+V G + ++ R + V ++ QE
Sbjct: 71 AVLKGDAYGHDLSLVAPIMI-ENNVKCIGVTNNQELKEVRDLGFKGRLMRVRNATEQEMA 129
Query: 210 QAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHID 265
QA + ++ D + L A P SGG++ + L ++
Sbjct: 130 QATNYNVEELIGDLDMAKRLDAIAKQQNKVIPIHLALNSGGMSRNGLEVDNKSGLE 185
>6HUL-A nrPDB
Length = 241
Score = 29.2 bits (64), Expect = 2.3, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 180 GVEKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELH 230
V++ + R + L V SS + A AGAD + + EE+
Sbjct: 170 SVKQLINRVRNLVENKLIVGFGLSSESDLRDALSAGADGIAIGTVFIEEIE 220
>1JCN-A nrPDB
Length = 514
Score = 28.8 bits (63), Expect = 3.2, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 213 EAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGG--ITLDNLPQFCGPHIDVISMG 270
+AG D+++LD+ + ++ A V + ++ GG +T +D + +G
Sbjct: 265 QAGVDVIVLDSSQGNSVYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRVG 324
Query: 271 M 271
M
Sbjct: 325 M 325
>2JFH-A nrPDB
Length = 445
Score = 28.4 bits (62), Expect = 4.0, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 11/132 (8%)
Query: 122 VEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNHVVAAGGV 181
V+ G T V TR T PG + + G L ++ + +VA+ G+
Sbjct: 22 VDFFLARGVTPRVMDTRMTPPGLDKLPEAVERHTG------SLNDEWLMAADLIVASPGI 75
Query: 182 EKAVRAARQAADFTLKVEVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFP 241
A + AAD +++ + EA A +V + + T A+
Sbjct: 76 ALAHPSLSAAADAGIEIVGDIELFCR-----EAQAPIVAITGSNGKSTVTTLVGEMAKAA 130
Query: 242 SVAVEASGGITL 253
V V G I L
Sbjct: 131 GVNVGVGGNIGL 142
>4LPS-A nrPDB
Length = 242
Score = 28.4 bits (62), Expect = 4.1, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 208 AVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQF 259
A + AD+V + NF+ ++ LK + P + + +L++ F
Sbjct: 176 ADAVIISKADMVEVFNFRVSQVKEDMQKLKPEAPIFLMSSKDPKSLEDFKNF 227
>5UMF-A nrPDB
Length = 235
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Query: 225 KPEELHPTATVLKAQFPS-VAVEASGGITLDNLPQFCGPHIDVISMGM 271
K ++ + + +A+E GGI DN+ D G
Sbjct: 164 KIRQVRAMLDRYEGKSGRRIAIEVDGGIKTDNIAAVARAGADTFVAGS 211
>1V77-A nrPDB
Length = 212
Score = 28.1 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 7/82 (8%)
Query: 199 EVECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQ 258
EV+ L+EA + E G +LL N KP + T +F S + L +
Sbjct: 39 EVDKEKLREARK--EYGKVAILLSNPKPSLVRDTVQ----KFKSYLIYVESN-DLRVIRY 91
Query: 259 FCGPHIDVISMGMLTQAAPALD 280
+D I + + P +D
Sbjct: 92 SIEKGVDAIISPWVNRKDPGID 113
>6BMA-A nrPDB
Length = 261
Score = 28.1 bits (61), Expect = 5.4, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 39/96 (40%), Gaps = 9/96 (9%)
Query: 184 AVRAARQAADFTLKVE----VECSSLQEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQ 239
+++ ++ +F + VE ++ +A AGAD++ +++ E+ ++ +
Sbjct: 149 SMKELKKLLEFARHLGLEALVEIHDKEDLSKAIFAGADIIGINHRNLEDFTMDMSLCEKL 208
Query: 240 FPS-----VAVEASGGITLDNLPQFCGPHIDVISMG 270
P + + SG + L +D +G
Sbjct: 209 IPQIPNSKIIIAESGLENKEFLEHLQNLGVDAFLIG 244
>1H1Z-A nrPDB
Length = 228
Score = 27.7 bits (60), Expect = 6.1, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 1/48 (2%)
Query: 224 FKPEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGM 271
F PE + L+ ++PS+ +E GG+ + + I G
Sbjct: 156 FMPEMMEK-VRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGS 202
>3INP-A nrPDB
Length = 246
Score = 27.7 bits (60), Expect = 6.2, Method: Composition-based stats.
Identities = 5/46 (10%), Positives = 17/46 (36%)
Query: 226 PEELHPTATVLKAQFPSVAVEASGGITLDNLPQFCGPHIDVISMGM 271
++ + + + + +E GG+ N+ + ++ G
Sbjct: 179 LDKAKEISKWISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGS 224
>4YUB-A nrPDB
Length = 538
Score = 27.7 bits (60), Expect = 7.2, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 75 LPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGIASAAAAA 121
LPEGS P + +V GP + L E L ++ S +A+ AA
Sbjct: 109 LPEGSLAFPGVPLLQVSGPLLVVQLLETPLLCLVSYASLVATNAARL 155
>2I71-A nrPDB
Length = 400
Score = 27.3 bits (59), Expect = 7.5, Method: Composition-based stats.
Identities = 6/33 (18%), Positives = 15/33 (45%)
Query: 248 SGGITLDNLPQFCGPHIDVISMGMLTQAAPALD 280
SG + LD L + + D ++ ++ ++
Sbjct: 304 SGNVDLDTLRHYAETYADKVTRAIIENEVDKIE 336
>3Q94-A nrPDB
Length = 288
Score = 27.3 bits (59), Expect = 7.7, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 9/82 (10%)
Query: 174 HVVAAGGVEKAVRAARQAADFTLKVEVECS---SLQEAVQAAEAGADLVLLD------NF 224
H+ V V+A + + T+ V + S ++ +A +AG V++D
Sbjct: 59 HMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVMIDASHHPFEE 118
Query: 225 KPEELHPTATVLKAQFPSVAVE 246
E A+ SV E
Sbjct: 119 NVETTKKVVEYAHARNVSVEAE 140
>6MWQ-A nrPDB
Length = 493
Score = 27.3 bits (59), Expect = 8.3, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 18/51 (35%)
Query: 206 QEAVQAAEAGADLVLLDNFKPEELHPTATVLKAQFPSVAVEASGGITLDNL 256
E GAD+ LD F LH A + V ++ + +L
Sbjct: 19 DEVRILMANGADVNALDRFGLTPLHLAAQRGHLEIVEVLLKCGADVNAADL 69
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.316 0.139 0.363
Lambda K H
0.267 0.0420 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,858,395
Number of Sequences: 36641
Number of extensions: 398367
Number of successful extensions: 1503
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 1376
Number of HSP's gapped (non-prelim): 98
length of query: 297
length of database: 10,336,785
effective HSP length: 96
effective length of query: 201
effective length of database: 6,819,249
effective search space: 1370669049
effective search space used: 1370669049
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)