BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q15120 (406 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1Y8N-A nrPDB 824 0.0 2Q8F-A nrPDB 587 e-168 3CRK-A nrPDB 582 e-166 2E0A-A nrPDB 544 e-155 4DZY-A nrPDB 153 2e-37 3SL2-A nrPDB 47 2e-05 4U7O-A nrPDB 35 0.039 4I5S-A nrPDB 35 0.040 4PL9-A nrPDB 35 0.050 6AZR-A nrPDB 33 0.22 4X9P-A nrPDB 32 0.67 5N7D-A nrPDB 32 0.68 1PEX-A nrPDB 31 0.86 4FU4-A nrPDB 31 1.2 4XEM-A nrPDB 28 6.6 1JQK-A nrPDB 28 7.5 >1Y8N-A nrPDB Length = 419 Score = 824 bits (2128), Expect = 0.0, Method: Compositional matrix adjust. Identities = 398/398 (100%), Positives = 398/398 (100%) Query: 9 KQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLP 68 KQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLP Sbjct: 22 KQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLP 81 Query: 69 DNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQ 128 DNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQ Sbjct: 82 DNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQ 141 Query: 129 GVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSID 188 GVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSID Sbjct: 142 GVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSID 201 Query: 189 PTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFEL 248 PTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFEL Sbjct: 202 PTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFEL 261 Query: 249 FKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA 308 FKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA Sbjct: 262 FKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA 321 Query: 309 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFER 368 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFER Sbjct: 322 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFER 381 Query: 369 LPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 406 LPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ Sbjct: 382 LPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 419 >2Q8F-A nrPDB Length = 407 Score = 587 bits (1513), Expect = e-168, Method: Compositional matrix adjust. Identities = 271/395 (68%), Positives = 333/395 (84%), Gaps = 3/395 (0%) Query: 12 VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71 VP Q++ Y+RFSPSPLS+KQFLDFG NACEKTS+MFLR+ELPVRLAN M+E++LLPDNL Sbjct: 13 VPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNL 72 Query: 72 LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131 L PSV LVQSWY+QS ELL++++KS ED + + +F +I++RNRHNDV+PTMAQGVI Sbjct: 73 LRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVI 132 Query: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFG--GDTNPVHPKHIGSIDP 189 EYKE FG DP S N+QYFLDRFY +RIS RML+NQH+LLFG G +P H KHIGSI+P Sbjct: 133 EYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINP 192 Query: 190 TCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELF 249 CNV +V+KD YE A+ LC+ YY+ +PELE+EE NAK+P +PIQVVYVPSHL+HM+FELF Sbjct: 193 NCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELF 252 Query: 250 KNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAP 309 KN+MRAT+E + +R YP ++ VTLG EDL++K+SD GGGVPLRKIDRLFNYMYSTAP Sbjct: 253 KNAMRATMEHHANRGV-YPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAP 311 Query: 310 RPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERL 369 RP +E +RA PLAGFGYGLPISRLYA+YFQGDLKLYS+EG GTDAVIY+KALS++S ERL Sbjct: 312 RPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERL 371 Query: 370 PVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404 PV+NK+AW+HY T EADDW PS EP+D + +++ Sbjct: 372 PVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRS 406 >3CRK-A nrPDB Length = 407 Score = 582 bits (1500), Expect = e-166, Method: Compositional matrix adjust. Identities = 274/408 (67%), Positives = 331/408 (81%), Gaps = 6/408 (1%) Query: 1 MRLFRWLLKQP----VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVR 56 MR FR LLK PK IE +S+FSPSPLS+KQFLDFG NACEKTS+ FLR+ELPVR Sbjct: 1 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR 60 Query: 57 LANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVR 116 LAN M+E+NLLPD +L+ PSV LVQSWY+QS L+++E+ +K PED + L F L+ +R Sbjct: 61 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR 120 Query: 117 NRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDT 176 NRHNDVVPTMAQGV+EYK+ +G DP + NIQYFLDRFY +RIS RMLINQHTL+F G T Sbjct: 121 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST 180 Query: 177 NPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVY 236 NP HPKHIGSIDP C+V+DVVKDAY+ AK+LC++YY+ +P+LE++E NA +PI +VY Sbjct: 181 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY 240 Query: 237 VPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRK 296 VPSHL+HMLFELFKN+MRATVE +E P +K +V LG+EDLSIK+SD GGGVPLRK Sbjct: 241 VPSHLYHMLFELFKNAMRATVESHESSLT-LPPIKIMVALGEEDLSIKMSDRGGGVPLRK 299 Query: 297 IDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVI 356 I+RLF+YMYSTAP P T PLAGFGYGLPISRLYA+YFQGDL+L+SMEG GTDAVI Sbjct: 300 IERLFSYMYSTAPTPQ-PGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVI 358 Query: 357 YLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404 YLKALS++S ERLPV+NKSAWRHY+T EA DW PS+EP++ S Y+ Sbjct: 359 YLKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRV 406 >2E0A-A nrPDB Length = 394 Score = 544 bits (1401), Expect = e-155, Method: Compositional matrix adjust. Identities = 251/394 (63%), Positives = 321/394 (81%), Gaps = 2/394 (0%) Query: 11 PVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDN 70 PVP+++E +SR+SPSPLS+KQ LDFG +NACE+TS+ FLR+ELPVRLAN ++E+++LP Sbjct: 2 PVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQ 61 Query: 71 LLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGV 130 L+N SV LV+SWY+QS ++L+E+ KSP+D + L +F+ LIKVRNRH++VVPTMAQG+ Sbjct: 62 LVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGI 121 Query: 131 IEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPT 190 IEYK+ DP + N+QYFLDRFY NRIS RML+NQH L+F D+ +P HIGSIDP Sbjct: 122 IEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIF-SDSQTGNPSHIGSIDPN 180 Query: 191 CNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFK 250 C+V VV+DA+E ++MLC+QYYL +PEL++ + N K PD+PI +VYVPSHL HMLFELFK Sbjct: 181 CDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFK 240 Query: 251 NSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPR 310 N+MRATVE E++ P ++ +V LGKEDL+IKISD GGGVPLR IDRLF+Y YSTAP Sbjct: 241 NAMRATVEHQENQPSLTP-IEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPT 299 Query: 311 PSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLP 370 P ++ +R APLAGFGYGLPISRLYA+YFQGDL LYS+ G GTDA+IYLKALSSES E+LP Sbjct: 300 PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLP 359 Query: 371 VFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404 VFNKSA++HY+ + EADDW PS EP++ +K A Sbjct: 360 VFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVA 393 >4DZY-A nrPDB Length = 418 Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 35/339 (10%) Query: 45 SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQV 104 S +L++ELPVR+A+ ++ LP + P++ V Y+++F +L ++ + + Sbjct: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 Query: 105 LDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRML 164 + Q++ ++ + H DVV +A+G+ E ++ + + +YFLD+ T+R+ RML Sbjct: 150 --QYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLV----RYFLDKTLTSRLGIRML 203 Query: 165 INQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVE-EF 223 H L + P +G I + +++ + A+ LCE Y AP + + Sbjct: 204 ATHHLAL-----HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHV 258 Query: 224 NAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSI 283 A+ P ++P L ++L EL KN+MRAT+E + D P V + DL I Sbjct: 259 AARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLII 311 Query: 284 KISDLGGGVPLRKIDRLFNYMYSTAPRPSLEP--------------TRAAPLAGFGYGLP 329 +ISD GGG+ + +DR+ +Y ++TA + +P ++ P+ GFG+GLP Sbjct: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLP 371 Query: 330 ISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSS--ESF 366 SR YA Y G L+L S++G+GTD + L+ + ESF Sbjct: 372 TSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410 >3SL2-A nrPDB Length = 177 Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 12/131 (9%) Query: 222 EFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDL 281 EF PD+ + V + +L + N+++ + E G+ V +E L Sbjct: 25 EFIRNLPDRDLYVEIDQDKITQVLDNIISNALKYSPE------GGHVTFSIDVNEEEELL 78 Query: 282 SIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGD 341 I + D G G+P + ++++F+ Y ++ R L G G GL I++ + GD Sbjct: 79 YISVKDEGIGIPKKDVEKVFDRFYR------VDKARTRKLGGTGLGLAIAKEMVQAHGGD 132 Query: 342 LKLYSMEGVGT 352 + S+EG GT Sbjct: 133 IWADSIEGKGT 143 >4U7O-A nrPDB Length = 277 Score = 35.4 bits (80), Expect = 0.039, Method: Compositional matrix adjust. Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 283 IKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDL 342 I ISD G G+P + +F+ + ++ R+ G G GL IS+ + G + Sbjct: 191 ISISDQGLGIPRADLGHVFDRFFR------VDKARSRAQGGTGLGLAISKEVVQMLGGRI 244 Query: 343 KLYSMEGVGTDAVIYL 358 + S+EG G+ I L Sbjct: 245 WVDSVEGKGSTFYISL 260 >4I5S-A nrPDB Length = 450 Score = 35.4 bits (80), Expect = 0.040, Method: Compositional matrix adjust. Identities = 29/131 (22%), Positives = 57/131 (43%), Gaps = 14/131 (10%) Query: 228 PDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISD 287 PDK + + + ++ + N+++ + +G T+ T + L + ISD Sbjct: 315 PDKSVWIEIDTDKMTQVIDNILNNAIKYS-------PDGGKVTITMQTTDTQ-LILSISD 366 Query: 288 LGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSM 347 G G+P + + +F+ Y ++ R+ G G GL I++ + +G + S Sbjct: 367 QGLGIPKKDLPLIFDRFY------RVDKARSRAQGGTGLGLAIAKEIVKQHKGFIWANSE 420 Query: 348 EGVGTDAVIYL 358 EG G+ I L Sbjct: 421 EGEGSTFTIVL 431 >4PL9-A nrPDB Length = 183 Score = 35.4 bits (80), Expect = 0.050, Method: Compositional matrix adjust. Identities = 40/155 (25%), Positives = 65/155 (41%), Gaps = 32/155 (20%) Query: 227 APDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKED------ 280 APD P VV L ++ + N+++ + K+G +V LVT K D Sbjct: 40 APDLPEFVVGDEKRLMQIILNIVGNAVKFS-------KQGSISVTALVT--KSDTRAADF 90 Query: 281 ----------LSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPI 330 L +K+ D G G+ + I ++F T TR++ G G GL I Sbjct: 91 FVVPTGSHFYLRVKVKDSGAGINPQDIPKIFTKFAQTQSL----ATRSS--GGSGLGLAI 144 Query: 331 SRLYARYFQGDLKLYSME-GVGTDAVIYLKALSSE 364 S+ + +G++ + S G G A+ +K SE Sbjct: 145 SKRFVNLMEGNIWIESDGLGKGCTAIFDVKLGISE 179 >6AZR-A nrPDB Length = 259 Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust. Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 15/130 (11%) Query: 231 PIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKED--LSIKISDL 288 P++ P+ + +L L N ++ + K+ P V L ++D + I + D Sbjct: 130 PVEAYIDPTRIRQVLLNLLNNGVKYS-------KKDAPDKYVKVILDEKDGGVLIIVEDN 182 Query: 289 GGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSME 348 G G+P DR+F Y + E + G G GL I++ G + + S Sbjct: 183 GIGIPDHAKDRIFEQFYRVDSSLTYE------VPGTGLGLAITKEIVELHGGRIWVESEV 236 Query: 349 GVGTDAVIYL 358 G G+ +++ Sbjct: 237 GKGSRFFVWI 246 >4X9P-A nrPDB Length = 343 Score = 31.6 bits (70), Expect = 0.67, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 335 ARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSS 394 A+Y +LK SM+G+GTD ++ + S + + L N+ YKT E D S+ S Sbjct: 111 AQYDASELKA-SMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIVSDTSG 169 Query: 395 EPR 397 + R Sbjct: 170 DFR 172 >5N7D-A nrPDB Length = 427 Score = 31.6 bits (70), Expect = 0.68, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 1/63 (1%) Query: 335 ARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSS 394 A+Y +LK SM+G+GTD ++ + S + + L N+ YKT E D S+ S Sbjct: 195 AQYDASELKA-SMKGLGTDEDSLIEIICSRTNQELQEINRVYKEMYKTDLEKDIISDTSG 253 Query: 395 EPR 397 + R Sbjct: 254 DFR 256 >1PEX-A nrPDB Length = 207 Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%) Query: 175 DTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAP-ELEVEEFNAKA--PDKP 231 D NP HPK DP+ ++ + ET ++ + P +++ E F K+ P+ P Sbjct: 8 DPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELP 67 Query: 232 IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKE 279 ++ H H L +F+ + Y D EGYP + + L KE Sbjct: 68 NRIDAAYEHPSHDLIFIFRGRKFWALNGY-DILEGYPKKISELGLPKE 114 >4FU4-A nrPDB Length = 368 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%) Query: 175 DTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAP-ELEVEEFNAKA--PDKP 231 D NP HPK DP+ ++ + ET ++ + P +++ E F K+ P+ P Sbjct: 169 DPNPKHPKTPDKCDPSLSLDAITSLRGETMIFKDRFFWRLHPQQVDAELFLTKSFWPELP 228 Query: 232 IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKE 279 ++ H H L +F+ + Y D EGYP + + L KE Sbjct: 229 NRIDAAYEHPSHDLIFIFRGRKFWALNGY-DILEGYPKKISELGLPKE 275 >4XEM-A nrPDB Length = 475 Score = 28.1 bits (61), Expect = 6.6, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 6/36 (16%) Query: 326 YGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKAL 361 +G+PI RLY YF GD E G +A + K + Sbjct: 146 FGIPIERLYVTYFGGD------EAAGLEADLECKQI 175 >1JQK-A nrPDB Length = 639 Score = 28.1 bits (61), Expect = 7.5, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 18/34 (52%) Query: 181 PKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLV 214 P H+GS+ P V K ETAK L Y++V Sbjct: 582 PTHVGSVPPVIGSQIVTKLVTETAKDLVGGYFIV 615 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3CRK-A nrPDB 674 0.0 1Y8N-A nrPDB 671 0.0 2Q8F-A nrPDB 666 0.0 2E0A-A nrPDB 645 0.0 4DZY-A nrPDB 419 e-117 3SL2-A nrPDB 159 1e-39 Sequences not found previously or not previously below threshold: 4I5S-A nrPDB 103 2e-22 4U7O-A nrPDB 101 5e-22 6AZR-A nrPDB 77 2e-14 5LFK-A nrPDB 61 8e-10 4PL9-A nrPDB 59 5e-09 4GCZ-A nrPDB 54 1e-07 4Q20-A nrPDB 53 3e-07 3D36-A nrPDB 49 3e-06 1R62-A nrPDB 49 5e-06 6BLK-C nrPDB 48 6e-06 1ID0-A nrPDB 45 4e-05 6DK7-A nrPDB 45 6e-05 1YSR-A nrPDB 42 4e-04 3CGZ-A nrPDB 40 0.002 3JZ3-A nrPDB 39 0.005 4JPB-A nrPDB 38 0.007 5IDM-A nrPDB 38 0.007 5IDJ-A nrPDB 38 0.007 4XIV-A nrPDB 38 0.007 1I5D-A nrPDB 38 0.007 3JA6-C nrPDB 37 0.013 5CPH-A nrPDB 35 0.076 1TID-A nrPDB 34 0.15 4KP4-A nrPDB 33 0.20 4CTI-A nrPDB 33 0.20 1BXD-A nrPDB 33 0.20 4URM-A nrPDB 33 0.20 3WC1-A nrPDB 32 0.64 1XRE-A nrPDB 31 0.93 1PVG-A nrPDB 31 0.93 4P7A-A nrPDB 31 0.94 5MMP-A nrPDB 31 1.0 4PU9-A nrPDB 31 1.0 4XEM-A nrPDB 31 1.1 6HAW-B nrPDB 29 3.2 4N77-A nrPDB 29 3.8 3SI2-A nrPDB 29 4.6 5GUP-v nrPDB 28 7.5 >3CRK-A nrPDB Length = 407 Score = 674 bits (1739), Expect = 0.0, Method: Composition-based stats. Identities = 274/408 (67%), Positives = 331/408 (81%), Gaps = 6/408 (1%) Query: 1 MRLFRWLLKQP----VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVR 56 MR FR LLK PK IE +S+FSPSPLS+KQFLDFG NACEKTS+ FLR+ELPVR Sbjct: 1 MRWFRALLKNASLAGAPKYIEHFSKFSPSPLSMKQFLDFGSSNACEKTSFTFLRQELPVR 60 Query: 57 LANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVR 116 LAN M+E+NLLPD +L+ PSV LVQSWY+QS L+++E+ +K PED + L F L+ +R Sbjct: 61 LANIMKEINLLPDRVLSTPSVQLVQSWYVQSLLDIMEFLDKDPEDHRTLSQFTDALVTIR 120 Query: 117 NRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDT 176 NRHNDVVPTMAQGV+EYK+ +G DP + NIQYFLDRFY +RIS RMLINQHTL+F G T Sbjct: 121 NRHNDVVPTMAQGVLEYKDTYGDDPVSNQNIQYFLDRFYLSRISIRMLINQHTLIFDGST 180 Query: 177 NPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVY 236 NP HPKHIGSIDP C+V+DVVKDAY+ AK+LC++YY+ +P+LE++E NA +PI +VY Sbjct: 181 NPAHPKHIGSIDPNCSVSDVVKDAYDMAKLLCDKYYMASPDLEIQEVNATNATQPIHMVY 240 Query: 237 VPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRK 296 VPSHL+HMLFELFKN+MRATVE +E P +K +V LG+EDLSIK+SD GGGVPLRK Sbjct: 241 VPSHLYHMLFELFKNAMRATVESHESSLT-LPPIKIMVALGEEDLSIKMSDRGGGVPLRK 299 Query: 297 IDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVI 356 I+RLF+YMYSTAP P T PLAGFGYGLPISRLYA+YFQGDL+L+SMEG GTDAVI Sbjct: 300 IERLFSYMYSTAPTP-QPGTGGTPLAGFGYGLPISRLYAKYFQGDLQLFSMEGFGTDAVI 358 Query: 357 YLKALSSESFERLPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404 YLKALS++S ERLPV+NKSAWRHY+T EA DW PS+EP++ S Y+ Sbjct: 359 YLKALSTDSVERLPVYNKSAWRHYQTIQEAGDWCVPSTEPKNTSTYRV 406 >1Y8N-A nrPDB Length = 419 Score = 671 bits (1731), Expect = 0.0, Method: Composition-based stats. Identities = 398/398 (100%), Positives = 398/398 (100%) Query: 9 KQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLP 68 KQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLP Sbjct: 22 KQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLP 81 Query: 69 DNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQ 128 DNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQ Sbjct: 82 DNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQ 141 Query: 129 GVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSID 188 GVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSID Sbjct: 142 GVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSID 201 Query: 189 PTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFEL 248 PTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFEL Sbjct: 202 PTCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFEL 261 Query: 249 FKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA 308 FKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA Sbjct: 262 FKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTA 321 Query: 309 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFER 368 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFER Sbjct: 322 PRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFER 381 Query: 369 LPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 406 LPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ Sbjct: 382 LPVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKAKQ 419 >2Q8F-A nrPDB Length = 407 Score = 666 bits (1718), Expect = 0.0, Method: Composition-based stats. Identities = 271/395 (68%), Positives = 333/395 (84%), Gaps = 3/395 (0%) Query: 12 VPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDNL 71 VP Q++ Y+RFSPSPLS+KQFLDFG NACEKTS+MFLR+ELPVRLAN M+E++LLPDNL Sbjct: 13 VPGQVDFYARFSPSPLSMKQFLDFGSVNACEKTSFMFLRQELPVRLANIMKEISLLPDNL 72 Query: 72 LNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVI 131 L PSV LVQSWY+QS ELL++++KS ED + + +F +I++RNRHNDV+PTMAQGVI Sbjct: 73 LRTPSVQLVQSWYIQSLQELLDFKDKSAEDAKAIYDFTDTVIRIRNRHNDVIPTMAQGVI 132 Query: 132 EYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFG--GDTNPVHPKHIGSIDP 189 EYKE FG DP S N+QYFLDRFY +RIS RML+NQH+LLFG G +P H KHIGSI+P Sbjct: 133 EYKESFGVDPVTSQNVQYFLDRFYMSRISIRMLLNQHSLLFGGKGKGSPSHRKHIGSINP 192 Query: 190 TCNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELF 249 CNV +V+KD YE A+ LC+ YY+ +PELE+EE NAK+P +PIQVVYVPSHL+HM+FELF Sbjct: 193 NCNVLEVIKDGYENARRLCDLYYINSPELELEELNAKSPGQPIQVVYVPSHLYHMVFELF 252 Query: 250 KNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAP 309 KN+MRAT+E + +R YP ++ VTLG EDL++K+SD GGGVPLRKIDRLFNYMYSTAP Sbjct: 253 KNAMRATMEHHANR-GVYPPIQVHVTLGNEDLTVKMSDRGGGVPLRKIDRLFNYMYSTAP 311 Query: 310 RPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERL 369 RP +E +RA PLAGFGYGLPISRLYA+YFQGDLKLYS+EG GTDAVIY+KALS++S ERL Sbjct: 312 RPRVETSRAVPLAGFGYGLPISRLYAQYFQGDLKLYSLEGYGTDAVIYIKALSTDSIERL 371 Query: 370 PVFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404 PV+NK+AW+HY T EADDW PS EP+D + +++ Sbjct: 372 PVYNKAAWKHYNTNHEADDWCVPSREPKDMTTFRS 406 >2E0A-A nrPDB Length = 394 Score = 645 bits (1664), Expect = 0.0, Method: Composition-based stats. Identities = 251/394 (63%), Positives = 321/394 (81%), Gaps = 2/394 (0%) Query: 11 PVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPVRLANTMREVNLLPDN 70 PVP+++E +SR+SPSPLS+KQ LDFG +NACE+TS+ FLR+ELPVRLAN ++E+++LP Sbjct: 2 PVPREVEHFSRYSPSPLSMKQLLDFGSENACERTSFAFLRQELPVRLANILKEIDILPTQ 61 Query: 71 LLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGV 130 L+N SV LV+SWY+QS ++L+E+ KSP+D + L +F+ LIKVRNRH++VVPTMAQG+ Sbjct: 62 LVNTSSVQLVKSWYIQSLMDLVEFHEKSPDDQKALSDFVDTLIKVRNRHHNVVPTMAQGI 121 Query: 131 IEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHIGSIDPT 190 IEYK+ DP + N+QYFLDRFY NRIS RML+NQH L+F D+ +P HIGSIDP Sbjct: 122 IEYKDACTVDPVTNQNLQYFLDRFYMNRISTRMLMNQHILIF-SDSQTGNPSHIGSIDPN 180 Query: 191 CNVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFK 250 C+V VV+DA+E ++MLC+QYYL +PEL++ + N K PD+PI +VYVPSHL HMLFELFK Sbjct: 181 CDVVAVVQDAFECSRMLCDQYYLSSPELKLTQVNGKFPDQPIHIVYVPSHLHHMLFELFK 240 Query: 251 NSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPR 310 N+MRATVE E++ P ++ +V LGKEDL+IKISD GGGVPLR IDRLF+Y YSTAP Sbjct: 241 NAMRATVEHQENQPSLTP-IEVIVVLGKEDLTIKISDRGGGVPLRIIDRLFSYTYSTAPT 299 Query: 311 PSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSSESFERLP 370 P ++ +R APLAGFGYGLPISRLYA+YFQGDL LYS+ G GTDA+IYLKALSSES E+LP Sbjct: 300 PVMDNSRNAPLAGFGYGLPISRLYAKYFQGDLNLYSLSGYGTDAIIYLKALSSESIEKLP 359 Query: 371 VFNKSAWRHYKTTPEADDWSNPSSEPRDASKYKA 404 VFNKSA++HY+ + EADDW PS EP++ +K A Sbjct: 360 VFNKSAFKHYQMSSEADDWCIPSREPKNLAKEVA 393 >4DZY-A nrPDB Length = 418 Score = 419 bits (1077), Expect = e-117, Method: Composition-based stats. Identities = 100/339 (29%), Positives = 175/339 (51%), Gaps = 35/339 (10%) Query: 45 SYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQV 104 S +L++ELPVR+A+ ++ LP + P++ V Y+++F +L ++ + + Sbjct: 90 SGRYLQQELPVRIAHRIKGFRSLPFIIGCNPTILHVHELYIRAFQKLTDFPPIKDQADEA 149 Query: 105 LDNFLQVLIKVRNRHNDVVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRML 164 + Q++ ++ + H DVV +A+G+ E ++ + + +YFLD+ T+R+ RML Sbjct: 150 --QYCQLVRQLLDDHKDVVTLLAEGLRESRKHIEDEKLV----RYFLDKTLTSRLGIRML 203 Query: 165 INQHTLLFGGDTNPVHPKHIGSIDPTCNVADVVKDAYETAKMLCEQYYLVAPELEVE-EF 223 H L + P +G I + +++ + A+ LCE Y AP + + Sbjct: 204 ATHHLAL-----HEDKPDFVGIICTRLSPKKIIEKWVDFARRLCEHKYGNAPRVRINGHV 258 Query: 224 NAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSI 283 A+ P ++P L ++L EL KN+MRAT+E + D P V + DL I Sbjct: 259 AARFP-------FIPMPLDYILPELLKNAMRATMESHLDTPYNVPDVVITIANNDVDLII 311 Query: 284 KISDLGGGVPLRKIDRLFNYMYSTAPRPSLEP--------------TRAAPLAGFGYGLP 329 +ISD GGG+ + +DR+ +Y ++TA + +P ++ P+ GFG+GLP Sbjct: 312 RISDRGGGIAHKDLDRVMDYHFTTAEASTQDPRISPLFGHLDMHSGGQSGPMHGFGFGLP 371 Query: 330 ISRLYARYFQGDLKLYSMEGVGTDAVIYLKALSS--ESF 366 SR YA Y G L+L S++G+GTD + L+ + ESF Sbjct: 372 TSRAYAEYLGGSLQLQSLQGIGTDVYLRLRHIDGREESF 410 >3SL2-A nrPDB Length = 177 Score = 159 bits (403), Expect = 1e-39, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 60/137 (43%), Gaps = 12/137 (8%) Query: 222 EFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDL 281 EF PD+ + V + +L + N+++ + E G+ V +E L Sbjct: 25 EFIRNLPDRDLYVEIDQDKITQVLDNIISNALKYSPE------GGHVTFSIDVNEEEELL 78 Query: 282 SIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGD 341 I + D G G+P + ++++F+ Y ++ R L G G GL I++ + GD Sbjct: 79 YISVKDEGIGIPKKDVEKVFDRFYR------VDKARTRKLGGTGLGLAIAKEMVQAHGGD 132 Query: 342 LKLYSMEGVGTDAVIYL 358 + S+EG GT L Sbjct: 133 IWADSIEGKGTTITFTL 149 >4I5S-A nrPDB Length = 450 Score = 103 bits (256), Expect = 2e-22, Method: Composition-based stats. Identities = 29/140 (20%), Positives = 58/140 (41%), Gaps = 14/140 (10%) Query: 219 EVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGK 278 +V E PDK + + + ++ + N+++ + + + V + Sbjct: 306 KVYEIIRDYPDKSVWIEIDTDKMTQVIDNILNNAIKYSPDGGK--------VTITMQTTD 357 Query: 279 EDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYF 338 L + ISD G G+P + + +F+ Y ++ R+ G G GL I++ + Sbjct: 358 TQLILSISDQGLGIPKKDLPLIFDRFYR------VDKARSRAQGGTGLGLAIAKEIVKQH 411 Query: 339 QGDLKLYSMEGVGTDAVIYL 358 +G + S EG G+ I L Sbjct: 412 KGFIWANSEEGEGSTFTIVL 431 >4U7O-A nrPDB Length = 277 Score = 101 bits (252), Expect = 5e-22, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 55/136 (40%), Gaps = 14/136 (10%) Query: 223 FNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLS 282 + + + V +L + N+++ + + G + L T + + Sbjct: 139 IKREFTKRDLWVEIDTDKFTQVLDNIMNNAIKYSPD------GGVVTCRLLETHNQ--VI 190 Query: 283 IKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDL 342 I ISD G G+P + +F+ + ++ R+ G G GL IS+ + G + Sbjct: 191 ISISDQGLGIPRADLGHVFDRFFR------VDKARSRAQGGTGLGLAISKEVVQMLGGRI 244 Query: 343 KLYSMEGVGTDAVIYL 358 + S+EG G+ I L Sbjct: 245 WVDSVEGKGSTFYISL 260 >6AZR-A nrPDB Length = 259 Score = 76.7 bits (187), Expect = 2e-14, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 12/136 (8%) Query: 223 FNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLS 282 F + P P++ P+ + +L L N ++ + +D + Y VK ++ + Sbjct: 123 FESNVPC-PVEAYIDPTRIRQVLLNLLNNGVKYS---KKDAPDKY--VKVILDEKDGGVL 176 Query: 283 IKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDL 342 I + D G G+P DR+F Y ++ + + G G GL I++ G + Sbjct: 177 IIVEDNGIGIPDHAKDRIFEQFYR------VDSSLTYEVPGTGLGLAITKEIVELHGGRI 230 Query: 343 KLYSMEGVGTDAVIYL 358 + S G G+ +++ Sbjct: 231 WVESEVGKGSRFFVWI 246 >5LFK-A nrPDB Length = 298 Score = 61.3 bits (147), Expect = 8e-10, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 16/133 (12%) Query: 226 KAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKI 285 P P + P+ L L + +N++R + + ++ + K+ ++I + Sbjct: 176 NFPPGPWPLYGNPNALESALENIVRNALRYS----------HTKIEVGFAVDKDGITITV 225 Query: 286 SDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLY 345 D G GV +++F Y T + R G G GL I + +G +K Sbjct: 226 DDDGPGVSPEDREQIFRPFYRT------DEARDRESGGTGLGLAIVETAIQQHRGWVKAE 279 Query: 346 SMEGVGTDAVIYL 358 G VI+L Sbjct: 280 DSPLGGLRLVIWL 292 >4PL9-A nrPDB Length = 183 Score = 58.6 bits (140), Expect = 5e-09, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 52/141 (36%), Gaps = 14/141 (9%) Query: 227 APDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGY-------PAVKTLVTLGKE 279 APD P VV L ++ + N+++ + + + T Sbjct: 40 APDLPEFVVGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTKSDTRAADFFVVPTGSHF 99 Query: 280 DLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQ 339 L +K+ D G G+ + I ++F T G G GL IS+ + + Sbjct: 100 YLRVKVKDSGAGINPQDIPKIFTKFAQTQSLA------TRSSGGSGLGLAISKRFVNLME 153 Query: 340 GDLKLYSME-GVGTDAVIYLK 359 G++ + S G G A+ +K Sbjct: 154 GNIWIESDGLGKGCTAIFDVK 174 >4GCZ-A nrPDB Length = 385 Score = 53.9 bits (128), Expect = 1e-07, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 18/119 (15%) Query: 228 PDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISD 287 P + V+ + +L LF+N++ A + V T + + +++SD Sbjct: 257 PGADL-VLADRVQIQQVLVNLFRNALEAMAQSQRREL-----VVTNTPAADDMIEVEVSD 310 Query: 288 LGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYS 346 G G I LF ++T G G GL ISR G + S Sbjct: 311 TGSGFQDDVIPNLFQTFFTTKDT------------GMGVGLSISRSIIEAHGGRMWAES 357 >4Q20-A nrPDB Length = 268 Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 38/113 (33%), Gaps = 20/113 (17%) Query: 240 HLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDR 299 L L L +N++R T G + LG+ L +SD G GVP Sbjct: 155 RLAQTLDHLVENALRQTP------PGGRVTLSARRALGEVRL--DVSDTGRGVPFHVQAH 206 Query: 300 LFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGT 352 +F+ G G GL + + G + L S G G+ Sbjct: 207 IFDRFV------------GRDRGGPGLGLALVKALVELHGGWVALESEPGNGS 247 >3D36-A nrPDB Length = 244 Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 60/177 (33%), Gaps = 32/177 (18%) Query: 195 DVVKDAYETAKMLCEQYYLVAPELEVEEFN------AKAPDKPIQVVYVP-------SHL 241 ++ D AK E + +LE+E A IQ P Sbjct: 65 AIITDYLTFAKPAPETPEKLNVKLEIERVIDILRPLANMSCVDIQATLAPFSVIGEREKF 124 Query: 242 FHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLF 301 L + KN++ A G V + G+ I+I+D G G+ +++RL Sbjct: 125 RQCLLNVMKNAIEAMPN------GGTLQVYVSIDNGRVL--IRIADTGVGMTKEQLERLG 176 Query: 302 NYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 ++T + G G G+ + G +++ S GT IYL Sbjct: 177 EPYFTTKG-----------VKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYL 222 >1R62-A nrPDB Length = 160 Score = 48.6 bits (114), Expect = 5e-06, Method: Composition-based stats. Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 17/134 (12%) Query: 228 PDKPIQVVYVPSHLFHMLFELFKNSMRA-TVELYEDRKEGYPAVKTLVTLGKEDLS--IK 284 P P ++ + P + +L + +N+++A E E A + + + L+ I Sbjct: 37 PSLP-ELAHDPDQIEQVLLNIVRNALQALGPEGGEIILRTRTAFQLTLHGERYRLAARID 95 Query: 285 ISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKL 344 + D G G+P D LF M S G G GL I+R G ++ Sbjct: 96 VEDNGPGIPPHLQDTLFYPMVSGRE------------GGTGLGLSIARNLIDQHSGKIEF 143 Query: 345 YSMEGVGTDAVIYL 358 S G T+ +YL Sbjct: 144 TSWPGH-TEFSVYL 156 >6BLK-C nrPDB Length = 158 Score = 48.2 bits (113), Expect = 6e-06, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 17/116 (14%) Query: 231 PIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKT-LVTLGKEDLSIKISDLG 289 P QV+ S L + + N+ + + G V+ + G +L I +D G Sbjct: 37 PWQVIGDSSGLGRAVLNVLDNAAKWSP------PGGRVGVRLYQIDPGHAELVI--TDQG 88 Query: 290 GGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLY 345 G+P ++ +F + +A S+ G G GL I + G L++ Sbjct: 89 PGIPPQERHLVFERFFRSASARSMP--------GSGLGLAIVKQVVLKHGGALRVD 136 >1ID0-A nrPDB Length = 152 Score = 45.5 bits (106), Expect = 4e-05, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 20/112 (17%) Query: 231 PIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGG 290 I V + ++ + N+ + +E V+ E L I + D G Sbjct: 35 EISFVGEQNDFVEVMGNVLDNACKYCLEF----------VEISARQTDEHLYIVVEDDGP 84 Query: 291 GVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDL 342 G+PL K + +F+ ++ R G G GL ++R ++G + Sbjct: 85 GIPLSKREVIFDR------GQRVDTLRP----GQGVGLAVAREITEQYEGKI 126 >6DK7-A nrPDB Length = 227 Score = 45.1 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 18/167 (10%) Query: 192 NVADVVKDAYETAKMLCEQYYLVAPELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKN 251 ++ +++D + ++ EQ +E + P P + P+ L ++ L N Sbjct: 74 DLNALIEDCLDIFRVKAEQQ-------RIELISFTQPQVPRVIGGDPTRLRQVVLSLLDN 126 Query: 252 SMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRP 311 + + T E E V L I + D G ++ + L TA Sbjct: 127 AFKQTEE-----GEILLVVALDDQGETPRLRIAVQDSGHPFDAKEREALL-----TAELH 176 Query: 312 SLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 S + A+ L G GL I+R R G+ + S GT + L Sbjct: 177 SGDFLSASKL-GSHLGLIIARQLVRLMGGEFGIQSGSSQGTTLSLTL 222 >1YSR-A nrPDB Length = 150 Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats. Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 22/143 (15%) Query: 216 PELEVEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVT 275 P+L+V P +V +P+ L + N+++ G V+ Sbjct: 26 PDLDVSLV----PSPTCIIVGLPAGLRLAVDNAIANAVKH---------GGATLVQLSAV 72 Query: 276 LGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYA 335 + + I I D G GVP + +F A +G G GL + A Sbjct: 73 SSRAGVEIAIDDNGSGVPEGERQVVFERFSR---------GSTASHSGSGLGLALVAQQA 123 Query: 336 RYFQGDLKLYSMEGVGTDAVIYL 358 + G L + G V+ L Sbjct: 124 QLHGGTASLENSPLGGARLVLRL 146 >3CGZ-A nrPDB Length = 157 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 21/120 (17%) Query: 231 PIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGG 290 I V + ++ + N+ + +E V+ + L I + D G Sbjct: 40 EISFVGEQNDFVEVMGNVLDNACKYCLEF----------VEISARQTDDHLHIFVEDDGP 89 Query: 291 GVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKL-YSMEG 349 G+P K +F+ + R G G GL ++R + G + S+ G Sbjct: 90 GIPHSKRSLVFDR------GQRADTLRP----GQGVGLAVAREITEQYAGQIIASDSLLG 139 >3JZ3-A nrPDB Length = 222 Score = 38.5 bits (88), Expect = 0.005, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 21/104 (20%) Query: 251 NSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPR 310 N++R + + VTL ++ ++ D G GV + R+ Y Sbjct: 128 NAVRYSPQGS----------VVDVTLNADNFIVR--DNGPGVTPEALARIGERFYR---- 171 Query: 311 PSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDA 354 P + A G G GL I + A+ +++ + E G +A Sbjct: 172 ---PPGQTA--TGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEA 210 >4JPB-A nrPDB Length = 319 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 33/162 (20%) Query: 223 FNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKE-GYPAVKTLV---TLGK 278 F + D + +V + L L +N++ +E E+R G P + TL+ Sbjct: 31 FIMRGEDTELDRTFVEE-IGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEG 89 Query: 279 EDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLA---------------- 322 ++ I++ D G G+ KI R + ++ ++AA L+ Sbjct: 90 NNVVIEVEDDGRGIDKEKIIR------KAIEKGLIDESKAATLSDQEILNFLVPGFSTKE 143 Query: 323 ------GFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 G G G+ + + G + + S + GT I L Sbjct: 144 KVSEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRL 185 >5IDM-A nrPDB Length = 179 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 29/151 (19%) Query: 220 VEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKE 279 + ++ P QV S L + L N+ A + G ++T E Sbjct: 30 ITDYGRDLP----QVRADKSQLETAVMNLAVNARDAV---RAAKGGGVVRIRTARLTRDE 82 Query: 280 DL------------SIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYG 327 + I++SD G G+P + ++F+ ++T P G G G Sbjct: 83 AIQLGFPAADGDTAFIEVSDDGPGIPPDVMGKIFDPFFTTKPVGE----------GTGLG 132 Query: 328 LPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 L + G + ++S G I+L Sbjct: 133 LATVYGIVKQSDGWIHVHSRPNEGAAFRIFL 163 >5IDJ-A nrPDB Length = 242 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 52/151 (34%), Gaps = 29/151 (19%) Query: 220 VEEFNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKE 279 + ++ P QV S L + L N+ A + G ++T E Sbjct: 104 ITDYGRDLP----QVRADKSQLETAVMNLAVNARDAV---RAAKGGGVVRIRTARLTRDE 156 Query: 280 DL------------SIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYG 327 + I++SD G G+P + ++F+ ++T P G G G Sbjct: 157 AIQLGFPAADGDTAFIEVSDDGPGIPPDVMGKIFDPFFTTKPVGE----------GTGLG 206 Query: 328 LPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 L + G + ++S G I+L Sbjct: 207 LATVYGIVKQSDGWIHVHSRPNEGAAFRIFL 237 >4XIV-A nrPDB Length = 252 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 28/160 (17%) Query: 223 FNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKE-GYPAVKTLV---TLGK 278 F + D + +V + L L +N++ +E E+R G P + TL+ Sbjct: 94 FIMRGEDTELDRTFVEE-IGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEG 152 Query: 279 EDLSIKISDLGGGVPLRKIDR--------------------LFNYMYSTAPRPSLEPTRA 318 ++ I++ D G G+ KI R + N+++ + Sbjct: 153 NNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFST---KEKV 209 Query: 319 APLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 + ++G G G+ + + G + + S + GT I L Sbjct: 210 SEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRL 249 >1I5D-A nrPDB Length = 191 Score = 38.2 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 28/160 (17%) Query: 223 FNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKE-GYPAVKTLV---TLGK 278 F + D + +V + L L +N++ +E E+R G P + TL+ Sbjct: 33 FIMRGEDTELDRTFVEE-IGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEG 91 Query: 279 EDLSIKISDLGGGVPLRKIDR--------------------LFNYMYSTAPRPSLEPTRA 318 ++ I++ D G G+ KI R + N+++ + Sbjct: 92 NNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFST---KEKV 148 Query: 319 APLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 + ++G G G+ + + G + + S + GT I L Sbjct: 149 SEVSGRGVGMDVVKNVVESLNGSISIESEKDKGTKVTIRL 188 >3JA6-C nrPDB Length = 379 Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 60/160 (37%), Gaps = 28/160 (17%) Query: 223 FNAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKE-GYPAVKTLV---TLGK 278 F + D + +V + L L +N++ +E E+R G P + TL+ Sbjct: 90 FIMRGEDTELDRTFVEE-IGEPLLHLLRNAIDHGIEPKEERIAKGKPPIGTLILSARHEG 148 Query: 279 EDLSIKISDLGGGVPLRKIDR--------------------LFNYMYSTAPRPSLEPTRA 318 ++ I++ D G G+ KI R + N+++ + Sbjct: 149 NNVVIEVEDDGRGIDKEKIIRKAIEKGLIDESKAATLSDQEILNFLFVPGFST---KEKV 205 Query: 319 APLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVIYL 358 + ++G G G+ + + G + + S + GT I L Sbjct: 206 SEVSGRGVGMDVVKNVVESLNGSMGIESEKDKGTKVTIRL 245 >5CPH-A nrPDB Length = 212 Score = 34.7 bits (78), Expect = 0.076, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 65/149 (43%), Gaps = 22/149 (14%) Query: 241 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRL 300 L H+++E+ NS+ + Y ++ ++ ++ ++D IK++D G G+P+ +++ Sbjct: 45 LHHLVWEIVDNSIDEALAGYANQ------IEVVI---EKDNWIKVTDNGRGIPVDIQEKM 95 Query: 301 FNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTD----AVI 356 S+ + L + + +Y + ++ + + ++ VGT VI Sbjct: 96 GRPAVEVILTSSVVNALSQDLEVYVHRNET--IYHQAYKKGVPQFDLKEVGTTDKTGTVI 153 Query: 357 YLKALSSESFERLPVFNKSAWRHYKTTPE 385 KA E F V+N Y+T + Sbjct: 154 RFKA-DGEIFTETTVYN------YETLQQ 175 >1TID-A nrPDB Length = 136 Score = 33.5 bits (75), Expect = 0.15, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 21/118 (17%) Query: 239 SHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKID 298 + + ++ E N++ + Y + G ++ ++ G L+++ D G G+P I+ Sbjct: 38 TEIKTVVSEAVTNAI---IHGYNNDPNGIVSISVIIEDGVVHLTVR--DEGVGIP--DIE 90 Query: 299 RLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVGTDAVI 356 +++T P L G G I F ++ + S GT + Sbjct: 91 EARQPLFTTKPE----------LERSGMGFTI----MENFMDEVIVESEVNKGTTVYL 134 >4KP4-A nrPDB Length = 236 Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 232 IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGG 291 I+V P + + + N+ R G +K ++ D G G Sbjct: 114 IEVKMHPLSIKRAVANMVVNAARY----------GNGWIKVSSGTEPNRAWFQVEDDGPG 163 Query: 292 VPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVG 351 + + LF +P + A ++G G GL I + G L+L + E G Sbjct: 164 IAPEQRKHLF--------QPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGG 215 >4CTI-A nrPDB Length = 273 Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 232 IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGG 291 I+V P + + + N+ R G +K ++ D G G Sbjct: 151 IEVKMHPLSIKRAVANMVVNAARY----------GNGWIKVSSGTEPNRAWFQVEDDGPG 200 Query: 292 VPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVG 351 + + LF +P + A ++G G GL I + G L+L + E G Sbjct: 201 IAPEQRKHLF--------QPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGG 252 >1BXD-A nrPDB Length = 161 Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 41/120 (34%), Gaps = 18/120 (15%) Query: 232 IQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGG 291 I+V P + + + N+ R G +K ++ D G G Sbjct: 39 IEVKMHPLSIKRAVANMVVNAARY----------GNGWIKVSSGTEPNRAWFQVEDDGPG 88 Query: 292 VPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGLPISRLYARYFQGDLKLYSMEGVG 351 + + LF +P + A ++G G GL I + G L+L + E G Sbjct: 89 IAPEQRKHLF--------QPFVRGDSARTISGTGLGLAIVQRIVDNHNGMLELGTSERGG 140 >4URM-A nrPDB Length = 231 Score = 33.1 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 70/170 (41%), Gaps = 41/170 (24%) Query: 241 LFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDR- 299 L H+++E+ NS+ + Y ++ ++ ++ ++D IK++D G G+P+ ++ Sbjct: 44 LHHLVWEIVDNSIDEALAGYANQ------IEVVI---EKDNWIKVTDNGRGIPVDIQEKM 94 Query: 300 -------LFNYMYSTAPRPSLEPTRAAPLAGFGYGL--PISR-----------LYARYFQ 339 + +++ + L G G + +S+ +Y + ++ Sbjct: 95 GRPAVEVILTVLHAGGKFGGGGYKVSGGLHGVGSSVVNALSQDLEVYVHRNETIYHQAYK 154 Query: 340 GDLKLYSMEGVGTD----AVIYLKALSSESFERLPVFNKSAWRHYKTTPE 385 + + ++ VGT VI KA E F V+N Y+T + Sbjct: 155 KGVPQFDLKEVGTTDKTGTVIRFKA-DGEIFTETTVYN------YETLQQ 197 >3WC1-A nrPDB Length = 271 Score = 31.6 bits (70), Expect = 0.64, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 14/136 (10%) Query: 62 REVNLLPDNLLNRPSVGLVQSWYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHND 121 +E LLPD + + V F + E+E P D + L K+ ++++D Sbjct: 17 KENYLLPDTYI----IIRVDGKGFHKFSQFYEFE--KPNDLKALQVMNSAAEKLMSKYSD 70 Query: 122 VVPTMAQGVIEYKEKFGFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHP 181 V ++ Y + + + N Q + R F L++ + + F P P Sbjct: 71 V-------MLAYGDSDEYSFLLRKNCQLYERREMKLTTLFSSLMSTYYMYFWSQYFPDKP 123 Query: 182 KHIGSIDPTCNVADVV 197 HI + P + V+ Sbjct: 124 LHIDHL-PNFDARAVL 138 >1XRE-A nrPDB Length = 217 Score = 31.2 bits (69), Expect = 0.93, Method: Composition-based stats. Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Query: 285 ISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAA-PLAGFGYG 327 +S GGG P + ++ +Y ++T + ++AA G GYG Sbjct: 99 MSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKAAISRFGSGYG 142 >1PVG-A nrPDB Length = 418 Score = 31.2 bits (69), Expect = 0.93, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 18/104 (17%) Query: 234 VVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVK-TLVTLGKEDLSIKISDLGGGV 292 V VP LF + E+ N+ D K P++K V + E+ +I++ + G G+ Sbjct: 59 VTIVPG-LFKIFDEILVNA--------ADNKVRDPSMKRIDVNIHAEEHTIEVKNDGKGI 109 Query: 293 PLRKIDR--------LFNYMYSTAPRPSLEPTRAAPLAGFGYGL 328 P+ ++ +F ++ +++ E G+G L Sbjct: 110 PIEIHNKENIYIPEMIFGHLLTSSNYDDDEKKVTGGRNGYGAKL 153 >4P7A-A nrPDB Length = 348 Score = 31.2 bits (69), Expect = 0.94, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 251 NSMRATVELYEDRKEGYPAVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPR 310 N+++ +E D K +++ +V G L I+I D G G+ +D + ++T+ Sbjct: 31 NAIKEMIENCLDAKST--SIQVIVKEGGLKL-IQIQDNGTGIRKEDLDIVCER-FTTSKL 86 Query: 311 PSLEPTRAAPLAGF 324 S E + GF Sbjct: 87 QSFEDLASISTYGF 100 >5MMP-A nrPDB Length = 234 Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Query: 224 NAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSI 283 K P I + L HM+FE+ N++ + + + +VT+ D S+ Sbjct: 33 VRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCK--------EIIVTI-HADNSV 83 Query: 284 KISDLGGGVP 293 + D G G+P Sbjct: 84 SVQDDGRGIP 93 >4PU9-A nrPDB Length = 398 Score = 30.8 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 9/70 (12%) Query: 224 NAKAPDKPIQVVYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLVTLGKEDLSI 283 K P I + L HM+FE+ N++ + + + +VT+ D S+ Sbjct: 25 VRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCK--------EIIVTI-HADNSV 75 Query: 284 KISDLGGGVP 293 + D G G+P Sbjct: 76 SVQDDGRGIP 85 >4XEM-A nrPDB Length = 475 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 10/16 (62%), Positives = 12/16 (75%) Query: 326 YGLPISRLYARYFQGD 341 +G+PI RLY YF GD Sbjct: 146 FGIPIERLYVTYFGGD 161 >6HAW-B nrPDB Length = 413 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 17/96 (17%), Positives = 38/96 (39%), Gaps = 5/96 (5%) Query: 214 VAPELEVEEFNAKAPDKPI-QVVYVPSHLFHMLFEL----FKNSMRATVELYEDRKEGYP 268 APE E A P I + V + + H++ L ++N++ ++ + R Sbjct: 107 TAPEFRRWEVAALQPQLRIDKAVALQNPQAHVIENLHAAAYRNALANSLYCPDYRIGKVT 166 Query: 269 AVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYM 304 V+ + S +++ +G GV + ++ Sbjct: 167 PVELHDYVQNHFTSARMALIGLGVSHPVLKQVAEQF 202 >4N77-A nrPDB Length = 248 Score = 28.9 bits (63), Expect = 3.8, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 3/66 (4%) Query: 218 LEVEEFNAKAPDKPIQV---VYVPSHLFHMLFELFKNSMRATVELYEDRKEGYPAVKTLV 274 LE K P P+ + YVPS ++ L + + +E Y G P L+ Sbjct: 137 LEALHRALKNPRFPLYLGRKSYVPSPPPYLPDGLVEAPLAEALEGYPYLLGGKPPEDLLL 196 Query: 275 TLGKED 280 L E+ Sbjct: 197 ALEAEE 202 >3SI2-A nrPDB Length = 327 Score = 28.9 bits (63), Expect = 4.6, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 2/54 (3%) Query: 2 RLFRWLLKQPVPKQIERYSRFSPSPLSIKQFLDFGRDNACEKTSYMFLRKELPV 55 R F L Q + K++ L K F +FG N + FLRK +PV Sbjct: 232 RWFNRL--QAIEKELYELGLLKDHSLERKYFQNFGYGNIIQDDHIPFLRKGVPV 283 >5GUP-v nrPDB Length = 453 Score = 28.1 bits (61), Expect = 7.5, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 50/135 (37%), Gaps = 22/135 (16%) Query: 214 VAPELEVEEFNA-KAPDKPIQVVYVPSHLFHMLFEL----FKNSMRATVELYEDRKEGYP 268 APE E A ++ + + V + +L L ++N++ ++ + R Sbjct: 142 AAPEFRRWEVAALQSQLRIDKAVAFQNPQAQVLENLHAAAYRNALANSLYCPDYRIGKVT 201 Query: 269 AVKTLVTLGKEDLSIKISDLGGGVPLRKIDRLFNYMYSTAPRPSLEPTRAAPLAGFGYGL 328 + + S +++ +G GV + ++ + + G GL Sbjct: 202 PDQLHYYVQNHFTSARMALIGLGVSHPVLKQVAERFLN--------------MRG---GL 244 Query: 329 PISRLYARYFQGDLK 343 +S A+Y G+++ Sbjct: 245 GLSGAKAKYRGGEIR 259 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.131 0.360 Lambda K H 0.267 0.0405 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,872,588 Number of Sequences: 36641 Number of extensions: 642120 Number of successful extensions: 1707 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 31 Number of HSP's successfully gapped in prelim test: 34 Number of HSP's that attempted gapping in prelim test: 1632 Number of HSP's gapped (non-prelim): 67 length of query: 406 length of database: 10,336,785 effective HSP length: 99 effective length of query: 307 effective length of database: 6,709,326 effective search space: 2059763082 effective search space used: 2059763082 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 60 (27.7 bits)