BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q14894 (314 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2I99-A nrPDB 635 0.0 4BVA-A nrPDB 577 e-165 1OMO-A nrPDB 134 5e-32 5GZJ-A nrPDB 90 1e-18 4MP6-A nrPDB 85 3e-17 1X7D-A nrPDB 72 3e-13 4YHJ-A nrPDB 30 0.92 5NHS-A nrPDB 30 1.5 5BN1-A nrPDB 30 1.9 1GPJ-A nrPDB 29 2.1 2HK7-A nrPDB 29 2.2 4D3S-A nrPDB 29 2.7 1DIA-A nrPDB 29 2.8 2CVZ-A nrPDB 28 4.2 6OSU-A nrPDB 28 5.6 2HAE-A nrPDB 28 5.6 3GWQ-A nrPDB 28 6.4 1VJT-A nrPDB 28 6.8 3NV9-A nrPDB 28 7.6 >2I99-A nrPDB Length = 312 Score = 635 bits (1639), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 2 SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGV 61 SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGV Sbjct: 1 SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGV 60 Query: 62 MPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTA 121 MPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTA Sbjct: 61 MPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTA 120 Query: 122 AVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV 181 AVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV Sbjct: 121 AVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV 180 Query: 182 QGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM 241 QGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM Sbjct: 181 QGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM 240 Query: 242 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTV 301 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTV Sbjct: 241 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTV 300 Query: 302 AAKLIYDSWSSG 313 AAKLIYDSWSSG Sbjct: 301 AAKLIYDSWSSG 312 >4BVA-A nrPDB Length = 335 Score = 577 bits (1486), Expect = e-165, Method: Compositional matrix adjust. Identities = 278/314 (88%), Positives = 296/314 (94%), Gaps = 1/314 (0%) Query: 1 MSRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLG 60 M R PAFLSA EV++HLRSSSLLIPPLE ALANFS GP+GGVMQPVRTVVPV KHRG+LG Sbjct: 23 MKRAPAFLSAEEVQDHLRSSSLLIPPLEAALANFSKGPDGGVMQPVRTVVPVAKHRGFLG 82 Query: 61 VMPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRT 120 VMPAYSAAEDALTTKLVTFYE T+V PSHQA+VLLF+PSNG+LLAVMDGNVITAKRT Sbjct: 83 VMPAYSAAEDALTTKLVTFYEGHSNTAV-PSHQASVLLFDPSNGSLLAVMDGNVITAKRT 141 Query: 121 AAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADT 180 AAVSAIATK LKPP S+VLCILGAGVQAYSHYEIFTEQFSFKEVR+WNRT+ENAEKFA T Sbjct: 142 AAVSAIATKLLKPPGSDVLCILGAGVQAYSHYEIFTEQFSFKEVRMWNRTRENAEKFAST 201 Query: 181 VQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDEL 240 VQG+VRVCSSVQEAV GADVIITVT+ATEPILFGEWVKPGAHINAVGASRPDWRELDDEL Sbjct: 202 VQGDVRVCSSVQEAVTGADVIITVTMATEPILFGEWVKPGAHINAVGASRPDWRELDDEL 261 Query: 241 MKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDT 300 M++AVLYVDS+EAALKESGDVLLSGA+IFAELGEVI G KPAHCEKTTVFKSLGMAVED Sbjct: 262 MRQAVLYVDSREAALKESGDVLLSGADIFAELGEVISGAKPAHCEKTTVFKSLGMAVEDL 321 Query: 301 VAAKLIYDSWSSGK 314 VAAKL+YDSWSSGK Sbjct: 322 VAAKLVYDSWSSGK 335 >1OMO-A nrPDB Length = 322 Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 91/268 (33%), Positives = 144/268 (53%), Gaps = 22/268 (8%) Query: 56 RGYLGVMPAYSAAEDALTTKLVTFYE---DRGITSVVPSHQATVLLFEPSNGTLLAVMDG 112 +G L MPA+ L K V + D+G+ P+ A ++L P G LAVMD Sbjct: 48 KGDLRAMPAHLMGYAGL--KWVNSHPGNPDKGL----PTVMALMILNSPETGFPLAVMDA 101 Query: 113 NVITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKE 172 T+ RT A IA K+L +S V +G G QAY E F EV+ ++ ++ Sbjct: 102 TYTTSLRTGAAGGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREK 161 Query: 173 NAEKFADTVQGEVRVCSSVQ--EAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASR 230 A+KF + + + +SVQ E + DV++T T + +P++ EWV+ G HINA+GA Sbjct: 162 AAKKFVSYCE-DRGISASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADG 220 Query: 231 PDWRELDDELMKEAVLYVDSQEAALKESGDV-------LLSGAEIFAELGEVIKGVKPAH 283 P +ELD E++K+A + VD E A K G++ ++ ++ A +GEVI G+K Sbjct: 221 PGKQELDVEILKKAKIVVDDLEQA-KHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGR 279 Query: 284 --CEKTTVFKSLGMAVEDTVAAKLIYDS 309 E+ T+F S G+A++D AK++Y++ Sbjct: 280 ESDEEITIFDSTGLAIQDVAVAKVVYEN 307 >5GZJ-A nrPDB Length = 359 Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 73/247 (29%), Positives = 111/247 (44%), Gaps = 7/247 (2%) Query: 70 DALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATK 129 D +T K V + +P+ TV ++ + G L A+MDG ++TA RT A SA+A++ Sbjct: 76 DHITLKTVGYSPANPARFGLPTILGTVARYDDTTGALTALMDGVLLTALRTGAASAVASR 135 Query: 130 FLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFAD--TVQGEVRV 187 L P S L ++G G QA + + + +W+ + E FA G Sbjct: 136 LLARPDSHTLGLIGTGAQAVTQLHALSLVLPLQRALVWDTDPAHRESFARRAAFTGVSVE 195 Query: 188 CSSVQEAVAGADVIITVT---LATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEA 244 + A ADVI T T + P+L V+ HINAVGA EL L++ A Sbjct: 196 IAEPARIAAEADVISTATSVAVGQGPVLPDTGVREHLHINAVGADLVGKTELPLGLLERA 255 Query: 245 VLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTT--VFKSLGMAVEDTVA 302 + D E AL+E LS + +L + A + T VF S G A ED +A Sbjct: 256 FVTADHPEQALREGECQQLSADRLGPQLAHLCADPAAAAGRQDTLSVFDSTGFAFEDALA 315 Query: 303 AKLIYDS 309 ++ ++ Sbjct: 316 MEVFLEA 322 >4MP6-A nrPDB Length = 339 Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 80/333 (24%), Positives = 151/333 (45%), Gaps = 38/333 (11%) Query: 1 MSRVPAFLSAAEVEE-HLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYL 59 M+R +L+ +++E+ S + + L AL ++ +QP++ + G++ Sbjct: 4 MNREMLYLNRSDIEQAGGNHSQVYVDALTEAL---TAHAHNDFVQPLKPYLRQDPENGHI 60 Query: 60 G----VMPAYSAAEDALT-TKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNV 114 MP++ E A++ K + D + ++L +P +AVM+ ++ Sbjct: 61 ADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASL 120 Query: 115 ITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKE-VRIWNRTKEN 173 I++ RTAAVS IA K L + L I+G G+ + EQF E V ++++ E Sbjct: 121 ISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIERVFVYDQFSEA 180 Query: 174 AEKFADTVQGE-----VRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGA 228 +F D Q + + +EAV+ +V+IT T+ +P + +W++ GA I+ + Sbjct: 181 CARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISI 240 Query: 229 SRPDWRELDDELMKEAVLYVD-------SQEAALKESGDVL-----LSGAEIFAELGEVI 276 ++ KE + D SQ K++ + L S + AELG+++ Sbjct: 241 M---------DVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLV 291 Query: 277 KGVKPAH--CEKTTVFKSLGMAVEDTVAAKLIY 307 G P ++ + +GMA+ED +A IY Sbjct: 292 TGDIPGREDDDEIILLNPMGMAIEDISSAYFIY 324 >1X7D-A nrPDB Length = 350 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 57/202 (28%), Positives = 99/202 (49%), Gaps = 10/202 (4%) Query: 114 VITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKEN 173 + TA RTAA S +A + L P++ + ++G G Q+ F + +E+ ++ Sbjct: 107 IATALRTAATSLMAAQALARPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLA 166 Query: 174 AEKFADTVQG----EVRVCSSVQEAVAGADVIITVTL--ATEPILFGEWVKPGAHINAVG 227 K ++ +R SSV EAV G D+I TVT A I+ + ++PG H+NAVG Sbjct: 167 TAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEPGMHLNAVG 226 Query: 228 ASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEI-FAELGEVIKGVKPAHC-- 284 P EL ++++ A ++V+ E + G++ A+ +L V++G Sbjct: 227 GDCPGKTELHADVLRNARVFVE-YEPQTRIEGEIQQLPADFPVVDLWRVLRGETEGRQSD 285 Query: 285 EKTTVFKSLGMAVEDTVAAKLI 306 + TVF S+G A+ED + + Sbjct: 286 SQVTVFDSVGFALEDYTVLRYV 307 >4YHJ-A nrPDB Length = 584 Score = 30.4 bits (67), Expect = 0.92, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 31/50 (62%), Gaps = 2/50 (4%) Query: 140 CILGAGVQAYSHYEIFTEQFSFKEV--RIWNRTKENAEKFADTVQGEVRV 187 C++ +Q +S ++ + E+ ++EV RI N T+E +EKF++ + R+ Sbjct: 374 CLIYEMIQGHSPFKKYKEKVKWEEVDQRIKNDTEEYSEKFSEDAKSICRM 423 >5NHS-A nrPDB Length = 296 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Query: 191 VQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPD 232 +Q V AD+++ V + ++ G+WVKPGA + VG +R D Sbjct: 207 LQTHVRDADILV-VAVGRPGLIPGDWVKPGAVVIDVGINRLD 247 >5BN1-A nrPDB Length = 219 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 6/42 (14%) Query: 215 EWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALK 256 +WV IN V WR+ D MKE +Y+D EA L+ Sbjct: 83 DWVSIMIGINDV------WRQYDLPFMKEKHVYLDEYEATLR 118 >1GPJ-A nrPDB Length = 404 Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/99 (24%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Query: 120 TAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFAD 179 +AAV +A + L + + ++GAG + + ++ + V + NRT E A + A Sbjct: 152 SAAVE-LAERELGSLHDKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELAR 209 Query: 180 TVQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVK 218 + GE + + +A +DV+++ T A P++ + V+ Sbjct: 210 DLGGEAVRFDELVDHLARSDVVVSATAAPHPVIHVDDVR 248 >2HK7-A nrPDB Length = 269 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%) Query: 139 LCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGA 198 + +LGAG S I+ +V +WNRTKE A K A E V +S +E + Sbjct: 126 ILVLGAG--GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE--VVNSPEEVIDKV 181 Query: 199 DVIITVT 205 VI+ T Sbjct: 182 QVIVNTT 188 >4D3S-A nrPDB Length = 293 Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 163 EVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGADVIITVT 205 E+ +WNRTK AE A+ +G S + AG V++++T Sbjct: 33 ELTVWNRTKAKAEALAE--RGAAVADSPAEALRAGGPVLLSLT 73 >1DIA-A nrPDB Length = 306 Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 185 VRVCSS----VQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASR-PDWRELDDE 239 V C S + E V D+++ T E ++ GEW+KPGA + G + PD ++ + Sbjct: 192 VTTCHSKTAHLDEEVNKGDILVVATGQPE-MVKGEWIKPGAIVIDCGINYVPDDKKPNGR 250 Query: 240 LMKEAVLYVDSQEAA 254 + V Y +++E A Sbjct: 251 KVVGDVAYDEAKERA 265 >2CVZ-A nrPDB Length = 289 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 28/193 (14%) Query: 137 EVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVA 196 E + +G G Y +F +WNRT E A + + E + E VA Sbjct: 2 EKVAFIGLGAMGYPMAGHLARRFP---TLVWNRTFEKALRHQEEFGSE----AVPLERVA 54 Query: 197 GADVIITVTLATEPIL-----FGEWVKPGAH-INAVGASRPDWRELDDELMKEAVLYVD- 249 A VI T T + +++ G + ++A R L + L ++ V Y+D Sbjct: 55 EARVIFTCLPTTREVYEVAEALYPYLREGTYWVDATSGEPEASRRLAERLREKGVTYLDA 114 Query: 250 --SQEAALKESG--DVLLSGAEIFAELGEVIKGVKP--AHCEKTTVFKSLGM--AVEDTV 301 S + E+G V+L G E E ++ V+P A+ +K +G AV+ Sbjct: 115 PVSGGTSGAEAGTLTVMLGGPE------EAVERVRPFLAYAKKVVHVGPVGAGHAVKAIN 168 Query: 302 AAKLIYDSWSSGK 314 A L + W++G+ Sbjct: 169 NALLAVNLWAAGE 181 >6OSU-A nrPDB Length = 427 Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust. Identities = 38/142 (26%), Positives = 60/142 (42%), Gaps = 16/142 (11%) Query: 48 TVVPVTKHRGYLGVMPAYSAAEDALTTK-LVTFYEDRGITSVVPSHQATVLLFEPSNGTL 106 T++P++++ G Y A ++ + LVT + VV + AT+ L E GT Sbjct: 87 TMIPISENAASTGGSKMYVKAGAKVSVRNLVTGMD------VVSGNDATIALAEYIGGTT 140 Query: 107 LAVMDGNVITAKRTAAVSAIATKFLKP---PSSEVLCIL-GAGVQAYSHYEIFTEQFSFK 162 A D TAK A+ T F P P E + A S+ F E + Sbjct: 141 QAFTDLMNQTAK---AIGMNNTHFANPDGLPGGEQYTTAHDMALLARSYIYNFPEAYKVY 197 Query: 163 EVR--IWNRTKENAEKFADTVQ 182 + + +WN TK+++ AD Q Sbjct: 198 DDKGLVWNATKQDSVSIADRKQ 219 >2HAE-A nrPDB Length = 386 Score = 28.1 bits (61), Expect = 5.6, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 186 RVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAV 245 R+ ++ A+ GAD I V+ IL EW+K + + A E+D EL +EA Sbjct: 242 RLSGDLETALEGADFFIGVSRGN--ILKPEWIKKMSRKPVIFALANPVPEIDPELAREAG 299 Query: 246 LYV 248 ++ Sbjct: 300 AFI 302 >3GWQ-A nrPDB Length = 426 Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Query: 209 EPILFGEWVKPGAHINAVGASRPDWRELDDEL-MKEAVLYVDSQEAALK 256 +P G + PG I A+R +W L++++ + AVLY D E LK Sbjct: 13 DPYSKGLGMVPGTSIQLTDAARLEWNLLNEDVSLPAAVLYADRVEHNLK 61 >1VJT-A nrPDB Length = 483 Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust. Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 2/68 (2%) Query: 174 AEKFADTVQGEVRVC--SSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRP 231 A K+ + + V++ SS+ EA+ GAD II +P + + VG Sbjct: 63 ARKYVEELNSPVKIVKTSSLDEAIDGADFIINTAYPYDPRYHDSGSQRWDEVTKVGEKHG 122 Query: 232 DWRELDDE 239 +R +D + Sbjct: 123 YYRGIDSQ 130 >3NV9-A nrPDB Length = 487 Score = 27.7 bits (60), Expect = 7.6, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 19/29 (65%) Query: 190 SVQEAVAGADVIITVTLATEPILFGEWVK 218 S+ EA GADV+I+++ ++ EW+K Sbjct: 287 SIAEACVGADVLISLSTPGPGVVKAEWIK 315 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4BVA-A nrPDB 446 e-126 2I99-A nrPDB 445 e-125 4MP6-A nrPDB 372 e-103 1OMO-A nrPDB 314 4e-86 5GZJ-A nrPDB 282 1e-76 1X7D-A nrPDB 244 3e-65 Sequences not found previously or not previously below threshold: 1GPJ-A nrPDB 41 9e-04 6BKF-A nrPDB 36 0.028 2HAE-A nrPDB 35 0.035 4CPD-A nrPDB 34 0.094 1Y0Y-A nrPDB 33 0.17 4WJI-A nrPDB 33 0.18 5NHS-A nrPDB 33 0.20 5O2A-B nrPDB 32 0.29 4D48-A nrPDB 32 0.42 4A5O-A nrPDB 31 0.55 5VM2-A nrPDB 31 0.62 1DIA-A nrPDB 31 0.70 2E3D-A nrPDB 31 0.94 4CCZ-A nrPDB 31 1.1 3NV9-A nrPDB 30 1.4 5UIA-A nrPDB 29 2.1 2DVM-A nrPDB 29 2.3 3FR8-A nrPDB 29 3.1 2DUL-A nrPDB 28 5.6 >4BVA-A nrPDB Length = 335 Score = 446 bits (1148), Expect = e-126, Method: Composition-based stats. Identities = 278/314 (88%), Positives = 296/314 (94%), Gaps = 1/314 (0%) Query: 1 MSRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLG 60 M R PAFLSA EV++HLRSSSLLIPPLE ALANFS GP+GGVMQPVRTVVPV KHRG+LG Sbjct: 23 MKRAPAFLSAEEVQDHLRSSSLLIPPLEAALANFSKGPDGGVMQPVRTVVPVAKHRGFLG 82 Query: 61 VMPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRT 120 VMPAYSAAEDALTTKLVTFYE T+V PSHQA+VLLF+PSNG+LLAVMDGNVITAKRT Sbjct: 83 VMPAYSAAEDALTTKLVTFYEGHSNTAV-PSHQASVLLFDPSNGSLLAVMDGNVITAKRT 141 Query: 121 AAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADT 180 AAVSAIATK LKPP S+VLCILGAGVQAYSHYEIFTEQFSFKEVR+WNRT+ENAEKFA T Sbjct: 142 AAVSAIATKLLKPPGSDVLCILGAGVQAYSHYEIFTEQFSFKEVRMWNRTRENAEKFAST 201 Query: 181 VQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDEL 240 VQG+VRVCSSVQEAV GADVIITVT+ATEPILFGEWVKPGAHINAVGASRPDWRELDDEL Sbjct: 202 VQGDVRVCSSVQEAVTGADVIITVTMATEPILFGEWVKPGAHINAVGASRPDWRELDDEL 261 Query: 241 MKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDT 300 M++AVLYVDS+EAALKESGDVLLSGA+IFAELGEVI G KPAHCEKTTVFKSLGMAVED Sbjct: 262 MRQAVLYVDSREAALKESGDVLLSGADIFAELGEVISGAKPAHCEKTTVFKSLGMAVEDL 321 Query: 301 VAAKLIYDSWSSGK 314 VAAKL+YDSWSSGK Sbjct: 322 VAAKLVYDSWSSGK 335 >2I99-A nrPDB Length = 312 Score = 445 bits (1144), Expect = e-125, Method: Composition-based stats. Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 2 SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGV 61 SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGV Sbjct: 1 SRVPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGV 60 Query: 62 MPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTA 121 MPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTA Sbjct: 61 MPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTA 120 Query: 122 AVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV 181 AVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV Sbjct: 121 AVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTV 180 Query: 182 QGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM 241 QGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM Sbjct: 181 QGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM 240 Query: 242 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTV 301 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTV Sbjct: 241 KEAVLYVDSQEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTV 300 Query: 302 AAKLIYDSWSSG 313 AAKLIYDSWSSG Sbjct: 301 AAKLIYDSWSSG 312 >4MP6-A nrPDB Length = 339 Score = 372 bits (954), Expect = e-103, Method: Composition-based stats. Identities = 80/334 (23%), Positives = 151/334 (45%), Gaps = 38/334 (11%) Query: 1 MSRVPAFLSAAEVEE-HLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYL 59 M+R +L+ +++E+ S + + L AL ++ +QP++ + G++ Sbjct: 4 MNREMLYLNRSDIEQAGGNHSQVYVDALTEAL---TAHAHNDFVQPLKPYLRQDPENGHI 60 Query: 60 G----VMPAYSAAEDALT-TKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNV 114 MP++ E A++ K + D + ++L +P +AVM+ ++ Sbjct: 61 ADRIIAMPSHIGGEHAISGIKWIGSKHDNPSKRNMERASGVIILNDPETNYPIAVMEASL 120 Query: 115 ITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKE-VRIWNRTKEN 173 I++ RTAAVS IA K L + L I+G G+ + EQF E V ++++ E Sbjct: 121 ISSMRTAAVSVIAAKHLAKKGFKDLTIIGCGLIGDKQLQSMLEQFDHIERVFVYDQFSEA 180 Query: 174 AEKFADTVQGE-----VRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGA 228 +F D Q + + +EAV+ +V+IT T+ +P + +W++ GA I+ + Sbjct: 181 CARFVDRWQQQRPEINFIATENAKEAVSNGEVVITCTVTDQPYIEYDWLQKGAFISNISI 240 Query: 229 SRPDWRELDDELMKEAVLYVD-------SQEAALKESGDVL-----LSGAEIFAELGEVI 276 ++ KE + D SQ K++ + L S + AELG+++ Sbjct: 241 M---------DVHKEVFIKADKVVVDDWSQCNREKKTINQLVLEGKFSKEALHAELGQLV 291 Query: 277 KGVKPAH--CEKTTVFKSLGMAVEDTVAAKLIYD 308 G P ++ + +GMA+ED +A IY Sbjct: 292 TGDIPGREDDDEIILLNPMGMAIEDISSAYFIYQ 325 >1OMO-A nrPDB Length = 322 Score = 314 bits (804), Expect = 4e-86, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 157/317 (49%), Gaps = 22/317 (6%) Query: 4 VPAFLSAAEVEEHLRSSSLLIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGVMP 63 L+ EVE L S + +E A F G P + + +G L MP Sbjct: 2 ETLILTQEEVES-LISMDEAMNAVEEA---FRLYALGKAQMPPKVYLEF--EKGDLRAMP 55 Query: 64 AYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAV 123 A+ L K V + +P+ A ++L P G LAVMD T+ RT A Sbjct: 56 AHLMGYAGL--KWVNSHPGNPDK-GLPTVMALMILNSPETGFPLAVMDATYTTSLRTGAA 112 Query: 124 SAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQG 183 IA K+L +S V +G G QAY E F EV+ ++ ++ A+KF + Sbjct: 113 GGIAAKYLARKNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCE- 171 Query: 184 EVRVCSSVQ--EAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELM 241 + + +SVQ E + DV++T T + +P++ EWV+ G HINA+GA P +ELD E++ Sbjct: 172 DRGISASVQPAEEASRCDVLVTTTPSRKPVVKAEWVEEGTHINAIGADGPGKQELDVEIL 231 Query: 242 KEAVLYVDSQEAALKESGDV-------LLSGAEIFAELGEVIKGVKPAH--CEKTTVFKS 292 K+A + VD E A K G++ ++ ++ A +GEVI G+K E+ T+F S Sbjct: 232 KKAKIVVDDLEQA-KHGGEINVAVSKGVIGVEDVHATIGEVIAGLKDGRESDEEITIFDS 290 Query: 293 LGMAVEDTVAAKLIYDS 309 G+A++D AK++Y++ Sbjct: 291 TGLAIQDVAVAKVVYEN 307 >5GZJ-A nrPDB Length = 359 Score = 282 bits (722), Expect = 1e-76, Method: Composition-based stats. Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 11/295 (3%) Query: 23 LIPPLETALANFSSGPEGGVMQPVRTVV-PVTKHRGYLGVMPAYSAAEDALTTKLVTFYE 81 +I L LA G + P+R + G MP + D +T K V + Sbjct: 31 IIDRLTGGLAEIGRGERH--LSPLRGGLERSEPVPGIWEWMP-HREPGDHITLKTVGYSP 87 Query: 82 DRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCI 141 +P+ TV ++ + G L A+MDG ++TA RT A SA+A++ L P S L + Sbjct: 88 ANPARFGLPTILGTVARYDDTTGALTALMDGVLLTALRTGAASAVASRLLARPDSHTLGL 147 Query: 142 LGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADT--VQGEVRVCSSVQEAVAGAD 199 +G G QA + + + +W+ + E FA G + A AD Sbjct: 148 IGTGAQAVTQLHALSLVLPLQRALVWDTDPAHRESFARRAAFTGVSVEIAEPARIAAEAD 207 Query: 200 VIITVT---LATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALK 256 VI T T + P+L V+ HINAVGA EL L++ A + D E AL+ Sbjct: 208 VISTATSVAVGQGPVLPDTGVREHLHINAVGADLVGKTELPLGLLERAFVTADHPEQALR 267 Query: 257 ESGDVLLSGAEIFAELGEVIKGVKPAHCEKTT--VFKSLGMAVEDTVAAKLIYDS 309 E LS + +L + A + T VF S G A ED +A ++ ++ Sbjct: 268 EGECQQLSADRLGPQLAHLCADPAAAAGRQDTLSVFDSTGFAFEDALAMEVFLEA 322 >1X7D-A nrPDB Length = 350 Score = 244 bits (623), Expect = 3e-65, Method: Composition-based stats. Identities = 68/269 (25%), Positives = 122/269 (45%), Gaps = 15/269 (5%) Query: 51 PVTKHR--GYLGVMPAYSAAEDALTTKLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLA 108 V H G + +MP A + K V + + + A +L + +G + Sbjct: 45 RVASHSEVGVIELMP--VADKSRYAFKYVNGHPANTAR-NLHTVMAFGVLADVDSGYPVL 101 Query: 109 VMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWN 168 + + + TA RTAA S +A + L P++ + ++G G Q+ F + +E+ ++ Sbjct: 102 LSELTIATALRTAATSLMAAQALARPNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYD 161 Query: 169 RTKENAEKFADTVQG----EVRVCSSVQEAVAGADVIITVTL--ATEPILFGEWVKPGAH 222 K ++ +R SSV EAV G D+I TVT A I+ + ++PG H Sbjct: 162 TDPLATAKLIANLKEYSGLTIRRASSVAEAVKGVDIITTVTADKAYATIITPDMLEPGMH 221 Query: 223 INAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEI-FAELGEVIKGVKP 281 +NAVG P EL ++++ A ++V+ E + G++ A+ +L V++G Sbjct: 222 LNAVGGDCPGKTELHADVLRNARVFVE-YEPQTRIEGEIQQLPADFPVVDLWRVLRGETE 280 Query: 282 AH--CEKTTVFKSLGMAVEDTVAAKLIYD 308 + TVF S+G A+ED + + Sbjct: 281 GRQSDSQVTVFDSVGFALEDYTVLRYVLQ 309 >1GPJ-A nrPDB Length = 404 Score = 40.5 bits (93), Expect = 9e-04, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 48/101 (47%), Gaps = 1/101 (0%) Query: 121 AAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADT 180 +A +A + L + + ++GAG + + ++ + V + NRT E A + A Sbjct: 152 SAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDR-GVRAVLVANRTYERAVELARD 210 Query: 181 VQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGA 221 + GE + + +A +DV+++ T A P++ + V+ Sbjct: 211 LGGEAVRFDELVDHLARSDVVVSATAAPHPVIHVDDVREAL 251 >6BKF-A nrPDB Length = 621 Score = 35.5 bits (80), Expect = 0.028, Method: Composition-based stats. Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 3/83 (3%) Query: 23 LIPPLETALANFSSGPEGGVMQPVRTVVPVTKHRGYLGVMPAYSAA-EDALTTKLVTFYE 81 +I L A+ G V QP+ P + G+L + P Y + D L +V Y Sbjct: 415 VIDALNEAIDKREEGIM--VKQPLSIYKPDKRGEGWLKIKPEYVSGLMDELDILIVGGYW 472 Query: 82 DRGITSVVPSHQATVLLFEPSNG 104 +G + SH + +P G Sbjct: 473 GKGSRGGMMSHFLCAVAEKPPPG 495 >2HAE-A nrPDB Length = 386 Score = 35.1 bits (79), Expect = 0.035, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 57/173 (32%), Gaps = 16/173 (9%) Query: 88 VVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCIL-GAGV 146 P + + D TA +A A K + EV ++ G G Sbjct: 134 GAPKCFRILQRLSEEMNIPV-FHDDQQGTAVVVSAAFLNALKLTEKKIEEVKVVVNGIGA 192 Query: 147 QAYSHYEIFTEQFSFKEVRIWNR-------TKENAEKF----ADTVQGEVRVCSSVQEAV 195 Y + F K V +R E + R+ ++ A+ Sbjct: 193 AGY-NIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARITNPERLSGDLETAL 251 Query: 196 AGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLYV 248 GAD I V + IL EW+K + + A E+D EL +EA ++ Sbjct: 252 EGADFFIGV--SRGNILKPEWIKKMSRKPVIFALANPVPEIDPELAREAGAFI 302 >4CPD-A nrPDB Length = 347 Score = 34.0 bits (76), Expect = 0.094, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 15/130 (11%) Query: 108 AVMDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIW 167 A+ G++++ TA I + P V ++GAG E+ + ++ Sbjct: 147 AIFAGDILS---TAYGGLIQGQL--RPGDSV-AVIGAGPVGLMAIEV-AQVLGASKILAI 199 Query: 168 NRTKENAEKFAD-------TVQGEVRVCSSVQEAVAGADVIITVTLATEPI-LFGEWVKP 219 +R E E+ A Q + G D+++ + L E V+P Sbjct: 200 DRIPERLERAASLGAIPINAEQENPVRRVRSETNDEGPDLVLEAVGGAATLSLALEMVRP 259 Query: 220 GAHINAVGAS 229 G ++AVG Sbjct: 260 GGRVSAVGVD 269 >1Y0Y-A nrPDB Length = 353 Score = 33.2 bits (74), Expect = 0.17, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 36/93 (38%), Gaps = 6/93 (6%) Query: 216 WVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEV 275 W+ G I VGAS P + ++ K D + + + ++ ++G V Sbjct: 106 WIDKGKFIYGVGASVPPHIQKPEDRKKAP----DWDQIFIDIGAESKEEAEDMGVKIGTV 161 Query: 276 IKGVKPAHCEKTTVFKSLGMAVEDTVAAKLIYD 308 I E+ + + +A +D +A I + Sbjct: 162 ITWD--GRLERLGKHRFVSIAFDDRIAVYTILE 192 >4WJI-A nrPDB Length = 293 Score = 32.8 bits (73), Expect = 0.18, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 63/182 (34%), Gaps = 20/182 (10%) Query: 136 SEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAV 195 + + ++G G+ S E+ + + E K A + R S EAV Sbjct: 4 FQTIALIGIGLIGSSIARDIREKQLAGTIVV-TTRSEATLKRAGELGLGDRYTLSAAEAV 62 Query: 196 AGAD-VIITVTLATEPILFGEW---VKPGAHINAVGAS-RPDWRELDDELMKEAVLYVDS 250 GAD V+++V + + E +KPGA + VG++ ++ L K+ Sbjct: 63 EGADLVVVSVPVGASGAVAAEIAAHLKPGAIVTDVGSTKGSVIAQMAPHLPKDVHFVPGH 122 Query: 251 QEAALKESGDVLLSGAEIFAELGEVIKGVKPAHCEKTTVFKSLGMAVEDTVAAKLIYDSW 310 A + SG FA L + G E +L +++ Sbjct: 123 PIAGTEHSG-----PDAGFAGLF---------RGRWCILTPPAGTDEEAVARLRLFWETL 168 Query: 311 SS 312 S Sbjct: 169 GS 170 >5NHS-A nrPDB Length = 296 Score = 32.8 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 192 QEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEA 244 Q V AD+++ V + ++ G+WVKPGA + VG +R D L ++ EA Sbjct: 208 QTHVRDADILV-VAVGRPGLIPGDWVKPGAVVIDVGINRLDDGRLVGDVGFEA 259 >5O2A-B nrPDB Length = 289 Score = 32.4 bits (72), Expect = 0.29, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Query: 170 TKENAEKFADTVQGEV--RVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVG 227 + E V R +++ V AD++I V + + G+W+K GA + VG Sbjct: 174 RPMSMELLLAGCTTTVTHRFTKNLRHHVENADLLI-VAVGKPGFIPGDWIKEGAIVIDVG 232 Query: 228 ASRPDWRELDDELM 241 +R + ++ +++ Sbjct: 233 INRLENGKVVGDVV 246 >4D48-A nrPDB Length = 302 Score = 31.7 bits (70), Expect = 0.42, Method: Composition-based stats. Identities = 13/91 (14%), Positives = 32/91 (35%), Gaps = 2/91 (2%) Query: 216 WVKPGAHINAVGA-SRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGE 274 V+P A + A G + + + V+ +A S ++ + A++ Sbjct: 168 MVEPVADVTAYGVVDCQGAQLNPGDSAPMVGV-VEKPKADQAPSNLAVVGRYVLSADIWP 226 Query: 275 VIKGVKPAHCEKTTVFKSLGMAVEDTVAAKL 305 ++ P ++ + S+ M +E Sbjct: 227 LLAKTPPGAGDEIQLTDSIAMLMEKETVEAY 257 >4A5O-A nrPDB Length = 286 Score = 31.3 bits (69), Expect = 0.55, Method: Composition-based stats. Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Query: 180 TVQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDE 239 TV R + + V+ AD+++ V ++ GEW+K GA + VG +R L + Sbjct: 187 TVTVTHRFTRDLADHVSRADLVV-VAAGKPGLVKGEWIKEGAIVIDVGINRQADGRLVGD 245 Query: 240 LMKEA 244 + E Sbjct: 246 VEYEV 250 >5VM2-A nrPDB Length = 347 Score = 31.3 bits (69), Expect = 0.62, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 16/117 (13%) Query: 110 MDGNVITAKRTAAVSAIATKFLKPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNR 169 MD T AAV A + + ILGAG + + E+ + + Sbjct: 143 MDTMEGTLVEPAAVGMHAAMLADVKPGKKIIILGAGCIGLMTLQA-CKCLGATEIAVVDV 201 Query: 170 TKEN---AEKFADTV------QGEVRVCSSVQEAVAGADVI-----ITVTLATEPIL 212 ++ AE+ TV + + C E + GAD++ VT+ P L Sbjct: 202 LEKRLAMAEQLGATVVINGAKEDTIARCQQFTEDM-GADIVFETAGSAVTVKQAPYL 257 >1DIA-A nrPDB Length = 306 Score = 30.9 bits (68), Expect = 0.70, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 32/71 (45%), Gaps = 3/71 (4%) Query: 188 CSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAVGASRPDWRELDDELMKEAVLY 247 + + E V D+++ T ++ GEW+KPGA + G + + + ++ V Sbjct: 199 TAHLDEEVNKGDILVVAT-GQPEMVKGEWIKPGAIVIDCGINYVPDDKKPNG--RKVVGD 255 Query: 248 VDSQEAALKES 258 V EA + S Sbjct: 256 VAYDEAKERAS 266 >2E3D-A nrPDB Length = 302 Score = 30.5 bits (67), Expect = 0.94, Method: Composition-based stats. Identities = 15/90 (16%), Positives = 33/90 (36%) Query: 216 WVKPGAHINAVGASRPDWRELDDELMKEAVLYVDSQEAALKESGDVLLSGAEIFAELGEV 275 V+P A + A G EL V V+ +A + S ++ + A++ + Sbjct: 168 MVEPVADVTAYGVVDCKGVELAPGESVPMVGVVEKPKADVAPSNLAIVGRYVLSADIWPL 227 Query: 276 IKGVKPAHCEKTTVFKSLGMAVEDTVAAKL 305 + P ++ + ++ M +E Sbjct: 228 LAKTPPGAGDEIQLTDAIDMLIEKETVEAY 257 >4CCZ-A nrPDB Length = 644 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 1/53 (1%) Query: 132 KPPSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGE 184 S + I+ AG +I E E IWN+ E EK Q + Sbjct: 589 AIKSGMDMGIVNAGNLPVYD-DIHKELLQLCEDLIWNKDPEATEKLLRYAQTQ 640 >3NV9-A nrPDB Length = 487 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 16/112 (14%) Query: 123 VSAIATKFLKPPSSEV--LCILGAGVQAYSHY-EIFTEQFSFKEVRIWNR---------T 170 + L + +GAG + I T K++ +++ Sbjct: 204 AGLLNALKLVKKDIHECRMVFIGAGSSNTTCLRLIVTAGADPKKIVMFDSKGSLHNGRED 263 Query: 171 KENAEKFADTVQ----GEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVK 218 + +F + S+ EA GADV+I+++ ++ EW+K Sbjct: 264 IKKDTRFYRKWEICETTNPSKFGSIAEACVGADVLISLSTPGPGVVKAEWIK 315 >5UIA-A nrPDB Length = 345 Score = 29.4 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 4/69 (5%) Query: 140 CILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENAEKFADTVQGEVRVCSSVQEAVAGA- 198 ++G G A + + + I +R + + D E R + G Sbjct: 9 ALIGCGFFAVNQMHAWKDVKGAGIAAICDRDPKRLKLVGDQFGIERRYGDAAALFADGGF 68 Query: 199 ---DVIITV 204 D+ TV Sbjct: 69 DFVDIATTV 77 >2DVM-A nrPDB Length = 439 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 37/111 (33%), Gaps = 19/111 (17%) Query: 127 ATKFLKPPSSE-VLCILGAGVQAYSHYEIFTE-------------QFSFKEVRIWNRTKE 172 A K + SE L + GAG ++ I TE + + E Sbjct: 176 ALKVVGKKISEITLALFGAGAAGFATLRILTEAGVKPENVRVVELVNGKPRILTSDLDLE 235 Query: 173 N----AEKFADTVQGEVRVCSSVQEAVAGADVIITVTLATEPILFGEWVKP 219 GE QEA+ ADV+I+ T ++ +W++ Sbjct: 236 KLFPYRGWLLKKTNGENIE-GGPQEALKDADVLISFTRPGPGVIKPQWIEK 285 >3FR8-A nrPDB Length = 525 Score = 29.0 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 12/101 (11%), Positives = 37/101 (36%), Gaps = 6/101 (5%) Query: 132 KPPSSEVLCILGAGVQAYSHYEIFTEQFSF--KEVRIWNRTKENAEKF----ADTVQGEV 185 + + ++G G Q + + + + ++ + ++ ++ F A E Sbjct: 50 AFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEES 109 Query: 186 RVCSSVQEAVAGADVIITVTLATEPILFGEWVKPGAHINAV 226 + E V+G+D+++ + E + N++ Sbjct: 110 GTLGDIWETVSGSDLVLLLISDAAQADNYEKIFSHMKPNSI 150 >2DUL-A nrPDB Length = 378 Score = 27.8 bits (60), Expect = 5.6, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 20/54 (37%) Query: 75 KLVTFYEDRGITSVVPSHQATVLLFEPSNGTLLAVMDGNVITAKRTAAVSAIAT 128 K + D + H+ + G+ + +D + +AKR + AT Sbjct: 112 KTIVINHDDANRLMAERHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT 165 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.125 0.300 Lambda K H 0.267 0.0384 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,546,728 Number of Sequences: 36641 Number of extensions: 323358 Number of successful extensions: 1063 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 33 Number of HSP's that attempted gapping in prelim test: 1008 Number of HSP's gapped (non-prelim): 56 length of query: 314 length of database: 10,336,785 effective HSP length: 97 effective length of query: 217 effective length of database: 6,782,608 effective search space: 1471825936 effective search space used: 1471825936 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 59 (27.4 bits)