BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q14749
(295 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
1R74-A nrPDB 615 e-176
1D2C-A nrPDB 567 e-162
5H02-A nrPDB 104 4e-23
3D2L-A nrPDB 44 7e-05
2AVN-A nrPDB 42 3e-04
5BSZ-A nrPDB 40 0.001
4QTT-B nrPDB 39 0.003
6M83-A nrPDB 36 0.023
2IW1-A nrPDB 35 0.053
3SM3-A nrPDB 35 0.056
3JWJ-A nrPDB 34 0.062
6G4W-q nrPDB 34 0.067
5U19-A nrPDB 34 0.067
4KDR-A nrPDB 34 0.072
6MRO-A nrPDB 34 0.073
4KDC-A nrPDB 34 0.081
3BUS-A nrPDB 33 0.14
1VBF-A nrPDB 32 0.24
4NEC-A nrPDB 32 0.27
3CCF-A nrPDB 32 0.32
4FS8-A nrPDB 32 0.38
4QDJ-A nrPDB 32 0.42
4P7C-A nrPDB 31 0.55
4HTF-A nrPDB 30 1.1
3M70-A nrPDB 30 1.5
2I6G-A nrPDB 30 1.5
3L8D-A nrPDB 30 1.5
1VRM-A nrPDB 29 2.1
5EGS-A nrPDB 29 2.2
5F8E-A nrPDB 29 2.3
5WP4-A nrPDB 29 2.5
2ODR-C nrPDB 29 2.9
5WP5-A nrPDB 28 3.4
5GM1-A nrPDB 28 3.8
6H65-A nrPDB 28 4.0
1DUS-A nrPDB 28 5.6
5JMQ-A nrPDB 28 6.0
1Y8C-A nrPDB 28 6.0
1RI1-A nrPDB 28 6.1
6G8G-A nrPDB 28 6.8
3BXO-A nrPDB 27 7.8
5LV5-A nrPDB 27 8.2
6D05-C nrPDB 27 8.6
2VS1-A nrPDB 27 9.1
>1R74-A nrPDB
Length = 294
Score = 615 bits (1585), Expect = e-176, Method: Compositional matrix adjust.
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 2 VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV 61
VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV
Sbjct: 1 VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV 60
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL
Sbjct: 61 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 120
Query: 122 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD 181
DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD
Sbjct: 121 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD 180
Query: 182 HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF 241
HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF
Sbjct: 181 HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF 240
Query: 242 RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD 295
RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD
Sbjct: 241 RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD 294
>1D2C-A nrPDB
Length = 292
Score = 567 bits (1462), Expect = e-162, Method: Compositional matrix adjust.
Identities = 270/293 (92%), Positives = 281/293 (95%), Gaps = 2/293 (0%)
Query: 2 VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV 61
VDSVYRTRSLGVAAEG+PDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGC RV
Sbjct: 1 VDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRV 60
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRR EPAFDKWVIEEANW+TL
Sbjct: 61 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 120
Query: 122 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD 181
DKDVP A GFDAVICLGNSFAHLPD KGDQSEHRLALKNIASMVR GGLLVIDHRNYD
Sbjct: 121 DKDVP--AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYD 178
Query: 182 HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF 241
+ILSTGCAPPGKNIYYKSDLTKD+TTSVL VNNKAHMVTLDYTVQVPGAG+DG+PG SKF
Sbjct: 179 YILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKF 238
Query: 242 RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRT 294
RLSYYPHCLASFTEL+Q AFGG+CQHSVLGDFKPY+PGQ Y+PCYFIHVLK+T
Sbjct: 239 RLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKT 291
>5H02-A nrPDB
Length = 283
Score = 104 bits (260), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/281 (30%), Positives = 136/281 (48%), Gaps = 37/281 (13%)
Query: 15 AEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIM 74
++G ++Y G + W I D SR ++ +L++ G ++VLDVA GTG +S+
Sbjct: 39 SDGYTNEYVSGFVDK-WDELI-DWESRAESEGDTIINILKERGVKKVLDVATGTGFNSVR 96
Query: 75 LVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFD 134
L++ GF V S D S +ML A N R + V +A+W ++KD+ FD
Sbjct: 97 LLQAGFDVVSADGSAEMLVKAFD---NARDHGYLMRTV--QADWRWMNKDIHDK----FD 147
Query: 135 AVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKN 194
A++CLGNSF HL D+ + R AL ++++ G+L++D RNYD IL G + +
Sbjct: 148 AIVCLGNSFTHLF----DEGDRRKALAEFYALLKHDGVLLLDQRNYDAILDDGYSSKHAH 203
Query: 195 IYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFT 254
YY D T SV + + Y DGS + L+ +P
Sbjct: 204 -YYCGD-----TVSVYPEHVDEGLARFKYEF------SDGSV----YNLNMFPLRKDYTR 247
Query: 255 ELLQAAFGGKCQHSVLGDFKP-YKPGQTYIPCYFIHVLKRT 294
+LL G + + LGDFK YK + P +F+HV ++
Sbjct: 248 QLLHEV--GFQEINTLGDFKETYKEDE---PDFFLHVAEKN 283
>3D2L-A nrPDB
Length = 243
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 34 YIGDTRSRTAEYKAWLLGLLRQ-HGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKML 92
Y+ D + Y W+ +L Q +R+ D+ CGTG +++L + + VT VD S++ML
Sbjct: 9 YVYDELMQDVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEML 67
Query: 93 KYAL-KERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKG 151
+ A K RH D WV + + ++P+ DA+ L +S +L
Sbjct: 68 EIAQEKAMETNRH---VDFWVQD-----MRELELPEPV----DAITILCDSLNYL----Q 111
Query: 152 DQSEHRLALKNIASMVRAGGLLVID 176
+++ + + A ++ GG L+ D
Sbjct: 112 TEADVKQTFDSAARLLTDGGKLLFD 136
>2AVN-A nrPDB
Length = 260
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 29 RVWQLYIGDTRSRTAEYKA--W-----LLGLLRQHGCQ---RVLDVACGTGVDSIMLVEE 78
R W+ Y R+ + Y+ W L+G + + RVLD+ GTG S+ L E
Sbjct: 16 RSWEFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER 75
Query: 79 GFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC 138
GF V VD S +ML+ A E V +A +D+P + G F+AV+
Sbjct: 76 GFEVVLVDPSKEMLEVA--------REKGVKNVVEAKA------EDLPFPS-GAFEAVLA 120
Query: 139 LGNSFAHLPDCKGDQSEHRLAL 160
LG+ +++ + SE R L
Sbjct: 121 LGDVLSYVENKDKAFSEIRRVL 142
>5BSZ-A nrPDB
Length = 250
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 53/120 (44%), Gaps = 19/120 (15%)
Query: 57 GCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEA 116
G + +LDVACGTG LVE V+ S M A E + +A
Sbjct: 47 GARSLLDVACGTGEHLAHLVEHFPDAAGVELSPAMRAAA---------ERKLTATPVHQA 97
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
+ D D+ + FDAV CL S A+ D +E A++ +A + GG+LVID
Sbjct: 98 D--MFDFDLGRV----FDAVCCLTGSIAY----AADTAELARAVRAMARHLPVGGVLVID 147
>4QTT-B nrPDB
Length = 208
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 22 YADGEAARVWQLYIGDTRSRTAEYKAWL--LGLLRQHGCQRVLDVACGTGVDSIMLVEEG 79
Y D EA + Y G TR + + K L L LL C +LD+ CG+G+ +L +EG
Sbjct: 14 YNDSEAHK----YTGSTRVQHIQAKMTLRALELLNLQPCSFILDIGCGSGLSGEILTQEG 69
Query: 80 FSV-TSVDASDKMLKYAL 96
V +D S ML L
Sbjct: 70 DHVWCGLDISPSMLATGL 87
>6M83-A nrPDB
Length = 263
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 57/130 (43%), Gaps = 21/130 (16%)
Query: 49 LLGLLRQHG--CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEP 106
L L+R+H +LDVACGTG+ L + +V ++ S ML A RR P
Sbjct: 40 LAALVRRHSPKAASLLDVACGTGMHLRHLADSFGTVEGLELSADMLAIA------RRRNP 93
Query: 107 AFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASM 166
V+ + S F AV C+ ++ HL Q+E AL+ A+
Sbjct: 94 ---DAVLHHGDMRDF------SLGRRFSAVTCMFSAIGHL----AGQAELDAALERFAAH 140
Query: 167 VRAGGLLVID 176
V G++V++
Sbjct: 141 VLPDGVVVVE 150
>2IW1-A nrPDB
Length = 374
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 41 RTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERW 100
R AEY AW+ L++H RV+ G+D + ++ A +K Y L R+
Sbjct: 64 RNAEYYAWVQNHLKEHPADRVVGFNKMPGLDVYFAADVCYAEKV--AQEKGFLYRLTSRY 121
Query: 101 NRRHEPAFDKWVIEEAN----WMTLDKDV 125
RH AF++ E+ M DK +
Sbjct: 122 --RHYAAFERATFEQGKSTKLMMLTDKQI 148
>3SM3-A nrPDB
Length = 235
Score = 34.7 bits (78), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 24/36 (66%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA 95
+LD+ CG+G S+ L +G+SVT +D + + ++ A
Sbjct: 33 EILDIGCGSGKISLELASKGYSVTGIDINSEAIRLA 68
>3JWJ-A nrPDB
Length = 202
Score = 34.3 bits (77), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRHEP 106
++ L+Q +RV+D+ CG G +L+++ F +T VD S + L+ A +ER +R P
Sbjct: 11 VVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIA-QERLDRLRLP 69
Query: 107 AFDKW 111
++W
Sbjct: 70 R-NQW 73
>6G4W-q nrPDB
Length = 281
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 17 GLPDQYADGEAAR--VWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIM 74
G P+ + D AR V + D ++R A LL L C +LD+ CGTG+
Sbjct: 12 GPPELFYDETEARKYVRNSRMIDIQTRMAGRALELLYLPENKPCY-LLDIGCGTGLSGSY 70
Query: 75 LVEEGFSVTSVDASDKMLKYAL 96
L +EG +D S ML A+
Sbjct: 71 LSDEGHYWVGLDISPAMLDEAV 92
>5U19-A nrPDB
Length = 341
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 19/134 (14%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAF 108
L+ L+ + G R LD+ CG+GV S++L + SV VD + + + + R A
Sbjct: 135 LIRLMLRRGGARALDMGCGSGVLSLVLADRYESVLGVDVNPRAVALS-------RLNAAL 187
Query: 109 DKWVIEEANWMTLDKDVPQSAEGGFDAVIC------LGNSFAHLPDCKGDQSEHRLALKN 162
+ N + D+ + AEG F ++ GN F L + + +N
Sbjct: 188 NGLT----NVTFREGDMFEPAEGRFSRIVFNSPTNEEGNEFVDL--LEAGEPILETFFRN 241
Query: 163 IASMVRAGGLLVID 176
+ + +GG++ ++
Sbjct: 242 VPRKLESGGIVEVN 255
>4KDR-A nrPDB
Length = 223
Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
++VLDV CG G+ + + EG +VT +D + L+ A + H A + + +
Sbjct: 64 KKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVA------KLH--ALESGIQVDYVQ 115
Query: 119 MTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGG 171
T+++ + A G +D V C+ H+PD + ++ A +V+ GG
Sbjct: 116 ETVEEHAAKHA-GQYDVVTCM-EMLEHVPDPQS-------VVRACAQLVKPGG 159
>6MRO-A nrPDB
Length = 194
Score = 34.3 bits (77), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRH 104
R LD+ CG G ++IML + G VT +D + + + A K + RH
Sbjct: 35 RALDIGCGRGENAIMLAKNGCDVTGIDLAKRAISDA-KAKAIERH 78
>4KDC-A nrPDB
Length = 246
Score = 33.9 bits (76), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 17/113 (15%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
++VLDV CG G+ + + EG +VT +D + L+ A + H A + + +
Sbjct: 64 KKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVA------KLH--ALESGIQVDYVQ 115
Query: 119 MTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGG 171
T+++ + A G +D V C+ H+PD + ++ A +V+ GG
Sbjct: 116 ETVEEHAAKHA-GQYDVVTCM-EMLEHVPDPQS-------VVRACAQLVKPGG 159
>3BUS-A nrPDB
Length = 273
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 21/130 (16%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIML-VEEGFSVTSVDASDKMLKYALKERWNRRHEPA 107
++ LL RVLDV CG G ++ L VT + S + A N R A
Sbjct: 53 MIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQA-----NARATAA 107
Query: 108 --FDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIAS 165
++ A+ M D+P + FDAV L S H+PD AL+ +A
Sbjct: 108 GLANRVTFSYADAM----DLPFE-DASFDAVWAL-ESLHHMPD-------RGRALREMAR 154
Query: 166 MVRAGGLLVI 175
++R GG + I
Sbjct: 155 VLRPGGTVAI 164
>1VBF-A nrPDB
Length = 231
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 48 WLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALK 97
++L L H Q+VL++ G G + ++ E V SV+ ++KM YA K
Sbjct: 61 FMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASK 110
>4NEC-A nrPDB
Length = 264
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA 95
VLD CGTG D++ L G++VT +D S + A
Sbjct: 63 VLDAGCGTGEDALHLAGLGYAVTGLDLSPTAISVA 97
>3CCF-A nrPDB
Length = 279
Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 35/81 (43%), Gaps = 4/81 (4%)
Query: 25 GEAARVWQLYI-GDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVT 83
G A W + D S +Y LL LL + +LD+ CGTG + + + G V
Sbjct: 24 GTAKNFWDATLYQDKHSFVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVL 83
Query: 84 SVDASDKMLKYALKERWNRRH 104
D + M++ K R N H
Sbjct: 84 GTDNAATMIE---KARQNYPH 101
>4FS8-A nrPDB
Length = 383
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 60/139 (43%), Gaps = 28/139 (20%)
Query: 61 VLDVACGTGVDSIM---LVEEGFSVTSVDASDKMLKYALK------ERW---NRRHEPAF 108
VLD+ CGTG D + LV E V VD D L+ A K E++ R F
Sbjct: 87 VLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRF 146
Query: 109 DKWVIEEANWMTLDKD-VPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLAL-KNIASM 166
K IE N T + + VP S+ D VI +C + S ++LAL K I +
Sbjct: 147 LKGFIE--NLATAEPEGVPDSS---VDIVI---------SNCVCNLSTNKLALFKEIHRV 192
Query: 167 VRAGGLLVIDHRNYDHILS 185
+R GG L D LS
Sbjct: 193 LRDGGELYFSDVYADRRLS 211
>4QDJ-A nrPDB
Length = 238
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA---LKERWNRRHEPAFDKWVIEEAN 117
V D CG G SI L + G V D S+KM+ A +E ++P F
Sbjct: 66 VCDAGCGVGSLSIPLAQAGALVYGSDISEKMVGEAQQKAQEVLAYGNQPTF--------- 116
Query: 118 WMTLDKDVPQSAEGGFDAVICLGNSFAHLP 147
+ +D+ Q G +D VICL + H P
Sbjct: 117 ---MTQDLAQLG-GKYDTVICL-DVLIHYP 141
>4P7C-A nrPDB
Length = 322
Score = 31.2 bits (69), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
+RVLDV CG G ++ G SV D + + + +R+ P W + A
Sbjct: 123 KRVLDVGCGNGYYQWRML--GAGADSVIGVDPNWLFFCQFQAMQRYLPDLPAWHLPFAL- 179
Query: 119 MTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLV 174
+D+P + E GFD V +G + + +H LALK+ +V+ G L++
Sbjct: 180 ----EDLPANLE-GFDTVFSMGVLYH-----RKSPIDHLLALKD--CLVKGGELVM 223
>4HTF-A nrPDB
Length = 285
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 8 TRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAW--LLGLLRQHGCQ--RVLD 63
T +L + + D+ D A + + G T+ + + W L +L + G Q RVLD
Sbjct: 15 TENLYFQSNAMQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLD 74
Query: 64 VACGTGVDSIMLVEEGFSVTSVDASDKMLKYA 95
G G +I + E G V D S +M+ A
Sbjct: 75 AGGGEGQTAIKMAERGHQVILCDLSAQMIDRA 106
>3M70-A nrPDB
Length = 286
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKY--ALKERWN 101
+VLD+ CG G +S+ L G+ VTS D ++ + + KE+ N
Sbjct: 123 KVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKEKEN 166
>2I6G-A nrPDB
Length = 199
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDAS 88
R LD+ CG G +S+ L G+ VT+ D +
Sbjct: 34 RTLDLGCGNGRNSLYLAANGYDVTAWDKN 62
>3L8D-A nrPDB
Length = 242
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKER 99
VLDV CG G + L G+ VD S+ M++ KER
Sbjct: 56 EVLDVGCGDGYGTYKLSRTGYKAVGVDISEVMIQKG-KER 94
>1VRM-A nrPDB
Length = 325
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 119 MTLDKDVPQSAEGGFDAVICLGNSFAHLP------DCKGDQSEHRLALKN--IASMVRAG 170
++ D++ E G D I +G F P D +GD + LK+ +A+
Sbjct: 179 LSFDENATGFVEAGGDVRI-IGPKFGKYPWVIGVKDPRGDDVIDYIYLKSGAVATSGDYE 237
Query: 171 GLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTS 208
V+D Y HIL P + ++ + + +D TT+
Sbjct: 238 RYFVVDGVRYHHILDPSTGYPARGVWSVTIIAEDATTA 275
>5EGS-A nrPDB
Length = 376
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 39 RSRTAEYKAWLLGLLRQHGCQR---VLDVACGTGVDSIMLVEEGF-SVTSVDAS 88
R RT Y+ LG+LR R VLDV GTG+ SI + G V +V+AS
Sbjct: 65 RVRTDAYR---LGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEAS 115
>5F8E-A nrPDB
Length = 377
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 22/154 (14%)
Query: 61 VLDVACGTGVDSIMLVEEGFSV---TSVDASDKMLKYALKERWNRRHEPAFDKWVIEEAN 117
V D CG+G ++ L+ + F T +D SD+ + +E E +
Sbjct: 191 VADFGCGSG-RAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARL----GLANATFERHD 245
Query: 118 WMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDH 177
LDK G +D + D DQ++ L+NI +R GG+L++
Sbjct: 246 LAELDK------VGAYDVITVF--------DAIHDQAQPARVLQNIYRALRPGGVLLMVD 291
Query: 178 RNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLI 211
L P Y + L +T S+ +
Sbjct: 292 IKASSQLEDNVGVPLSTYLYTTSLMHCMTVSLAL 325
>5WP4-A nrPDB
Length = 491
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 59 QRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALK 97
Q+VLDV CG G + E+ V +D S M+ +AL+
Sbjct: 284 QKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALE 323
>2ODR-C nrPDB
Length = 701
Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNR--RHEPAFDKWVIEEANW- 118
+D+ G + +L + GF+ +K KY E + P +W +E A +
Sbjct: 260 VDINDGKAIAEGLLSQFGFTNFKFIPDEKKSKYYTPETQTEVYAYHPKLKEW-LEVATFG 318
Query: 119 ----MTLDK---DVPQSAEG-GFDAVICLGNSFAHLPDCKGDQ-SEHRLALKNIASMVRA 169
+ L K DVP G G + + + +FA + + Q EH+L +N+ASMV+
Sbjct: 319 VYSPVALSKYGIDVPVMNLGLGVERLAMISGNFADVREMVYPQFYEHKLNDRNVASMVKL 378
Query: 170 GGLLVIDH 177
+ V+D
Sbjct: 379 DKVPVMDE 386
>5WP5-A nrPDB
Length = 491
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 59 QRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALK 97
Q+VLDV CG G + E V +D S M+ +AL+
Sbjct: 284 QKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMISFALE 323
>5GM1-A nrPDB
Length = 297
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Query: 45 YKAWLLGLLRQHGCQRVLDVACGTGVDSIMLV-EEGFSVTSVDASDKMLKYA 95
Y +L+ L Q +LD+ CGTG ++ + G +VT V S + + A
Sbjct: 65 YTDYLIETLDPKAGQHLLDIGCGTGRTALKAARQRGIAVTGVAVSKEQIAAA 116
>6H65-A nrPDB
Length = 317
Score = 28.5 bits (62), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 10/49 (20%)
Query: 12 GVAAEGLP------DQYADGEAA----RVWQLYIGDTRSRTAEYKAWLL 50
G AE LP Q DGE R+ +LY G T + YK+WLL
Sbjct: 265 GTIAEILPVTTIDRIQVGDGEVGPVTRRLQELYFGVTSGQLEAYKSWLL 313
>1DUS-A nrPDB
Length = 194
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA 95
+LD+ CG GV I L +E S T D + + +K A
Sbjct: 56 ILDLGCGYGVIGIALADEVKSTTMADINRRAIKLA 90
>5JMQ-A nrPDB
Length = 446
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 20 DQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEG 79
++Y D L + + RT +Y + +L + +LDV CGTG+ S+
Sbjct: 113 EEYFDSYGTLKLHLEMLADQPRTTKYHSVILQNKESLKDKVILDVGCGTGIISLFCAHHA 172
Query: 80 F--SVTSVDASD 89
+V +V+ASD
Sbjct: 173 RPKAVYAVEASD 184
>1Y8C-A nrPDB
Length = 246
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 25/119 (21%), Positives = 57/119 (47%), Gaps = 15/119 (12%)
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
LD+ACGTG + L + + +VD S +ML A + ++ +P + ++ + + +
Sbjct: 42 LDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKP---RLACQDISNLNI 98
Query: 122 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNY 180
++ FD + C +S ++ D + + K +++ ++ GG+ + D +Y
Sbjct: 99 NR--------KFDLITCCLDSTNYII----DSDDLKKYFKAVSNHLKEGGVFIFDINSY 145
>1RI1-A nrPDB
Length = 298
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 15/160 (9%)
Query: 46 KAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYA-LKERWNRR 103
KA L+ L + G VLD+ CG G D + G VD ++ + A ++ R +R
Sbjct: 54 KACLIRLYTKRG-DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR 112
Query: 104 HEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNI 163
F + M L K+ FD VI SF H + + +A +NI
Sbjct: 113 RFKVFFRAQDSYGRHMDLGKE--------FD-VISSQFSF-HYAFSTSESLD--IAQRNI 160
Query: 164 ASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTK 203
A +R GG ++ + D IL N +YK +L K
Sbjct: 161 ARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEK 200
>6G8G-A nrPDB
Length = 214
Score = 27.7 bits (60), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Query: 74 MLVEEGFSVTSVDASDKM--LKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEG 131
+ +E+GFS TS+DA K + A + E F ++ E + D VP+ + G
Sbjct: 33 LFLEQGFSATSMDAIAKAAGVSKATLYAYFPSKEALFASLIVAECESLQRDLPVPKLSAG 92
Query: 132 GFDAVICLGNSFAH 145
+A+ + H
Sbjct: 93 LSEALRDFARQYLH 106
>3BXO-A nrPDB
Length = 239
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALK 97
+LDVACGTG +E ++ S+ ML +A K
Sbjct: 41 ASSLLDVACGTGTHLEHFTKEFGDTAGLELSEDMLTHARK 80
>5LV5-A nrPDB
Length = 403
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 46 KAWLLGLLRQHGCQR---VLDVACGTGVDSIMLVEEGF-SVTSVDAS 88
+A+ LG+L+ R VLDV GTG+ SI + G V +V+AS
Sbjct: 96 EAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEAS 142
>6D05-C nrPDB
Length = 698
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 128 SAEGGFDAVICLGNSFAHLP--DCKGDQSEHRLALKNIASMVRAGGLLV--IDHRNYDHI 183
+ E G+ AV + S + L + KG +S H A+ A GLL I+H +D
Sbjct: 440 TPEAGYFAVAVVKKSASDLTWDNLKGKKSCH-TAVGRTAGWNIPMGLLYNKINHCRFDEF 498
Query: 184 LSTGCAPPGK 193
S GCAP K
Sbjct: 499 FSEGCAPGSK 508
>2VS1-A nrPDB
Length = 425
Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 11/39 (28%), Positives = 23/39 (58%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALK 97
+++LD+ G G I L + GF+V D+++ ++ A +
Sbjct: 292 EKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARR 330
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
1R74-A nrPDB 492 e-139
1D2C-A nrPDB 480 e-136
5H02-A nrPDB 288 2e-78
3D2L-A nrPDB 137 5e-33
2AVN-A nrPDB 123 1e-28
5BSZ-A nrPDB 109 1e-24
Sequences not found previously or not previously below threshold:
6M83-A nrPDB 65 4e-11
3BXO-A nrPDB 62 2e-10
1Y8C-A nrPDB 58 6e-09
2GLU-A nrPDB 56 2e-08
3CCF-A nrPDB 53 2e-07
5GM1-A nrPDB 51 4e-07
3BUS-A nrPDB 51 8e-07
5F8E-A nrPDB 50 1e-06
3SM3-A nrPDB 50 1e-06
4KDR-A nrPDB 49 2e-06
4KDC-A nrPDB 49 3e-06
3MGG-A nrPDB 48 4e-06
3L8D-A nrPDB 48 6e-06
4PNE-A nrPDB 48 6e-06
5JE5-A nrPDB 47 9e-06
2GS9-A nrPDB 46 2e-05
4QTT-B nrPDB 46 2e-05
5U19-A nrPDB 46 2e-05
4NEC-A nrPDB 45 5e-05
1RI1-A nrPDB 44 6e-05
6MRO-A nrPDB 43 1e-04
3E23-A nrPDB 42 3e-04
3EGE-A nrPDB 42 3e-04
3DP7-A nrPDB 42 3e-04
6G4W-q nrPDB 42 4e-04
4INE-A nrPDB 41 4e-04
3JWJ-A nrPDB 41 5e-04
4HTF-A nrPDB 41 6e-04
4KRI-A nrPDB 41 6e-04
5BP9-A nrPDB 41 8e-04
3LCC-A nrPDB 41 0.001
5WP5-A nrPDB 39 0.002
5WP4-A nrPDB 39 0.002
3OU6-A nrPDB 39 0.002
5Z9O-A nrPDB 39 0.003
4QDJ-A nrPDB 39 0.003
3BKW-A nrPDB 39 0.003
2I6G-A nrPDB 39 0.003
5EVJ-A nrPDB 39 0.003
2B3T-A nrPDB 38 0.005
2P35-A nrPDB 37 0.008
3HNR-A nrPDB 37 0.009
5MGZ-A nrPDB 37 0.010
6DCC-A nrPDB 37 0.011
2PJD-A nrPDB 37 0.014
5E72-A nrPDB 36 0.015
4HGY-A nrPDB 36 0.015
5M58-A nrPDB 36 0.016
5I2H-A nrPDB 36 0.017
1VBF-A nrPDB 36 0.019
4FS8-A nrPDB 36 0.024
2YR0-A nrPDB 36 0.025
1TPY-A nrPDB 35 0.035
3HEM-A nrPDB 35 0.042
2VS1-A nrPDB 35 0.042
4KIC-A nrPDB 35 0.043
4DZR-A nrPDB 35 0.044
1NKV-A nrPDB 35 0.048
1UWV-A nrPDB 35 0.049
4P7C-A nrPDB 34 0.057
3MCZ-A nrPDB 34 0.058
3M70-A nrPDB 34 0.068
3G5T-A nrPDB 34 0.071
4YMH-A nrPDB 34 0.076
1WXW-A nrPDB 34 0.081
3JWI-A nrPDB 34 0.082
6BQC-A nrPDB 34 0.083
4RYL-A nrPDB 34 0.083
1N2X-A nrPDB 34 0.086
5EGS-A nrPDB 34 0.091
1L3B-A nrPDB 34 0.10
5W7M-A nrPDB 34 0.11
5X7F-A nrPDB 34 0.11
1G6Q-1 nrPDB 33 0.12
6CU3-A nrPDB 33 0.12
1X1B-A nrPDB 33 0.13
3I9F-A nrPDB 33 0.14
5LV5-A nrPDB 33 0.14
3BKX-A nrPDB 33 0.14
1KP9-A nrPDB 33 0.19
1F3L-A nrPDB 33 0.20
5BP7-A nrPDB 32 0.21
2XVM-A nrPDB 32 0.27
4HG2-A nrPDB 32 0.28
5JMQ-A nrPDB 32 0.29
1Q2L-A nrPDB 32 0.30
3DMF-A nrPDB 32 0.31
3SVZ-A nrPDB 32 0.33
6GKZ-A nrPDB 32 0.40
4AZW-A nrPDB 31 0.48
4AZV-A nrPDB 31 0.48
1P91-A nrPDB 31 0.52
2HNK-A nrPDB 31 0.82
4QNV-A nrPDB 31 0.83
4DCM-A nrPDB 31 0.84
5KPG-A nrPDB 31 0.86
3CJR-A nrPDB 31 0.88
3V8V-A nrPDB 30 1.0
1VQ1-A nrPDB 30 1.1
1PJZ-A nrPDB 30 1.5
2YXL-A nrPDB 30 1.6
5E9J-A nrPDB 30 1.6
3BGV-A nrPDB 30 1.6
5FUB-A nrPDB 30 1.7
1NW6-A nrPDB 29 1.8
5XN8-A nrPDB 29 2.0
1DUS-A nrPDB 29 2.0
1DL5-A nrPDB 29 2.1
3M6U-A nrPDB 29 2.2
2H1R-A nrPDB 29 2.4
3NJR-A nrPDB 29 2.5
2H11-A nrPDB 29 2.6
2YVL-A nrPDB 29 2.7
3X0D-A nrPDB 29 2.9
1FP2-A nrPDB 29 3.0
6OGN-A nrPDB 29 3.3
1WF3-A nrPDB 28 4.3
2PWY-A nrPDB 28 4.3
6IWT-A nrPDB 28 4.6
2QYO-A nrPDB 28 4.7
3BGI-A nrPDB 28 5.0
5XOH-A nrPDB 28 5.1
1KYW-A nrPDB 28 5.4
4EVI-A nrPDB 28 5.9
2BGN-E nrPDB 27 6.5
3TTS-A nrPDB 27 7.5
>1R74-A nrPDB
Length = 294
Score = 492 bits (1265), Expect = e-139, Method: Composition-based stats.
Identities = 294/294 (100%), Positives = 294/294 (100%)
Query: 2 VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV 61
VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV
Sbjct: 1 VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV 60
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL
Sbjct: 61 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 120
Query: 122 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD 181
DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD
Sbjct: 121 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD 180
Query: 182 HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF 241
HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF
Sbjct: 181 HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF 240
Query: 242 RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD 295
RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD
Sbjct: 241 RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRTD 294
>1D2C-A nrPDB
Length = 292
Score = 480 bits (1235), Expect = e-136, Method: Composition-based stats.
Identities = 270/293 (92%), Positives = 281/293 (95%), Gaps = 2/293 (0%)
Query: 2 VDSVYRTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRV 61
VDSVYRTRSLGVAAEG+PDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGC RV
Sbjct: 1 VDSVYRTRSLGVAAEGIPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCHRV 60
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRR EPAFDKWVIEEANW+TL
Sbjct: 61 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTL 120
Query: 122 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYD 181
DKDVP A GFDAVICLGNSFAHLPD KGDQSEHRLALKNIASMVR GGLLVIDHRNYD
Sbjct: 121 DKDVP--AGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYD 178
Query: 182 HILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKF 241
+ILSTGCAPPGKNIYYKSDLTKD+TTSVL VNNKAHMVTLDYTVQVPGAG+DG+PG SKF
Sbjct: 179 YILSTGCAPPGKNIYYKSDLTKDITTSVLTVNNKAHMVTLDYTVQVPGAGRDGAPGFSKF 238
Query: 242 RLSYYPHCLASFTELLQAAFGGKCQHSVLGDFKPYKPGQTYIPCYFIHVLKRT 294
RLSYYPHCLASFTEL+Q AFGG+CQHSVLGDFKPY+PGQ Y+PCYFIHVLK+T
Sbjct: 239 RLSYYPHCLASFTELVQEAFGGRCQHSVLGDFKPYRPGQAYVPCYFIHVLKKT 291
>5H02-A nrPDB
Length = 283
Score = 288 bits (736), Expect = 2e-78, Method: Composition-based stats.
Identities = 87/281 (30%), Positives = 136/281 (48%), Gaps = 37/281 (13%)
Query: 15 AEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIM 74
++G ++Y G + W I D SR ++ +L++ G ++VLDVA GTG +S+
Sbjct: 39 SDGYTNEYVSGFVDK-WDELI-DWESRAESEGDTIINILKERGVKKVLDVATGTGFNSVR 96
Query: 75 LVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFD 134
L++ GF V S D S +ML A N R + V +A+W ++KD+ FD
Sbjct: 97 LLQAGFDVVSADGSAEMLVKAFD---NARDHGYLMRTV--QADWRWMNKDIHDK----FD 147
Query: 135 AVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKN 194
A++CLGNSF HL D+ + R AL ++++ G+L++D RNYD IL G + +
Sbjct: 148 AIVCLGNSFTHLF----DEGDRRKALAEFYALLKHDGVLLLDQRNYDAILDDGYSSKHAH 203
Query: 195 IYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGSPGLSKFRLSYYPHCLASFT 254
YY D T SV + + Y DGS + L+ +P
Sbjct: 204 -YYCGD-----TVSVYPEHVDEGLARFKYEF------SDGSV----YNLNMFPLRKDYTR 247
Query: 255 ELLQAAFGGKCQHSVLGDFKP-YKPGQTYIPCYFIHVLKRT 294
+LL G + + LGDFK YK + P +F+HV ++
Sbjct: 248 QLLHEV--GFQEINTLGDFKETYKEDE---PDFFLHVAEKN 283
>3D2L-A nrPDB
Length = 243
Score = 137 bits (345), Expect = 5e-33, Method: Composition-based stats.
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 40/263 (15%)
Query: 34 YIGDTRSRTAEYKAWLLGLLRQ-HGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKML 92
Y+ D + Y W+ +L Q +R+ D+ CGTG +++L + + VT VD S++ML
Sbjct: 9 YVYDELMQDVPYPEWVAWVLEQVEPGKRIADIGCGTGTATLLLADH-YEVTGVDLSEEML 67
Query: 93 KYAL-KERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKG 151
+ A K RH D WV + + ++P+ DA+ L +S +L
Sbjct: 68 EIAQEKAMETNRH---VDFWVQD-----MRELELPEPV----DAITILCDSLNYL----Q 111
Query: 152 DQSEHRLALKNIASMVRAGGLLVID-HRNY--DHILSTGCAPPGKNIYYKSDLTKDVTTS 208
+++ + + A ++ GG L+ D H Y + + + + ++
Sbjct: 112 TEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHA----------EQSSY 161
Query: 209 VLIVNNKAHMVTLDYTVQVPGAGQDG---SPGLSKFRLSYYPHCLASFTELLQAAFGGKC 265
+ + +++ + + G+DG + + +Y P + L+ A G
Sbjct: 162 IWFADPGEEPLSVVHELTFFIEGEDGRYDRVDETHHQRTYPP---EQYITWLREA--GFR 216
Query: 266 QHSVLGDFKPYKPGQTYIPCYFI 288
+V GDFK P +T +F+
Sbjct: 217 VCAVTGDFKSDAPTETAERIFFV 239
>2AVN-A nrPDB
Length = 260
Score = 123 bits (307), Expect = 1e-28, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 32/162 (19%)
Query: 29 RVWQLYIGDTRSRTAEYKA--W-----LLGLLRQHGCQ---RVLDVACGTGVDSIMLVEE 78
R W+ Y R+ + Y+ W L+G + + RVLD+ GTG S+ L E
Sbjct: 16 RSWEFYDRIARAYDSMYETPKWKLYHRLIGSFLEEYLKNPCRVLDLGGGTGKWSLFLQER 75
Query: 79 GFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC 138
GF V VD S +ML+ A E V +A +D+P + G F+AV+
Sbjct: 76 GFEVVLVDPSKEMLEVA--------REKGVKNVVEAKA------EDLPFPS-GAFEAVLA 120
Query: 139 LGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNY 180
LG+ +++ + SE R + GLL+ N+
Sbjct: 121 LGDVLSYVENKDKAFSEIRRV-------LVPDGLLIATVDNF 155
>5BSZ-A nrPDB
Length = 250
Score = 109 bits (273), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 69/167 (41%), Gaps = 22/167 (13%)
Query: 12 GVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQH--GCQRVLDVACGTG 69
G A G Y D V+ L+ A W+ ++R+ G + +LDVACGTG
Sbjct: 1 GHMAVGSTSVYGDA-LGEVYDLFYRGRGKDFAAEAEWVRRVVRERRPGARSLLDVACGTG 59
Query: 70 VDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSA 129
LVE V+ S M A E + +A+ D D+ +
Sbjct: 60 EHLAHLVEHFPDAAGVELSPAMRAAA---------ERKLTATPVHQAD--MFDFDLGRV- 107
Query: 130 EGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
FDAV CL S A+ D +E A++ +A + GG+LVID
Sbjct: 108 ---FDAVCCLTGSIAY----AADTAELARAVRAMARHLPVGGVLVID 147
>6M83-A nrPDB
Length = 263
Score = 64.8 bits (156), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/176 (25%), Positives = 72/176 (40%), Gaps = 21/176 (11%)
Query: 19 PDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQ--RVLDVACGTGVDSIMLV 76
P GE A ++ L A L L+R+H + +LDVACGTG+ L
Sbjct: 10 PQADYSGEIAELYDLVHQGKGKDYHREAADLAALVRRHSPKAASLLDVACGTGMHLRHLA 69
Query: 77 EEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAV 136
+ +V ++ S ML A RR P V+ + D + + F AV
Sbjct: 70 DSFGTVEGLELSADMLAIA------RRRNP---DAVLHHGD--MRDFSLGRR----FSAV 114
Query: 137 ICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPG 192
C+ ++ HL Q+E AL+ A+ V G++V++ + + G G
Sbjct: 115 TCMFSAIGHL----AGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAG 166
>3BXO-A nrPDB
Length = 239
Score = 62.1 bits (149), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/201 (20%), Positives = 72/201 (35%), Gaps = 25/201 (12%)
Query: 33 LYIGDTRSRTAEYKAWLLGLLRQHG--CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDK 90
Y+G + AE + L+R +LDVACGTG +E ++ S+
Sbjct: 15 FYLGRGKDYAAEASD-IADLVRSRTPEASSLLDVACGTGTHLEHFTKEFGDTAGLELSED 73
Query: 91 MLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCK 150
ML +A K + D + + F AV+ + +S +L
Sbjct: 74 MLTHARKRLPDATLHQG-----------DMRDFRLGRK----FSAVVSMFSSVGYL---- 114
Query: 151 GDQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVL 210
E A+ + A + GG++V++ + + G + D S
Sbjct: 115 KTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADV---VRRDGRTVARVSHS 171
Query: 211 IVNNKAHMVTLDYTVQVPGAG 231
+ A + + +TV PG G
Sbjct: 172 VREGNATRMEVHFTVADPGKG 192
>1Y8C-A nrPDB
Length = 246
Score = 57.9 bits (138), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 66/153 (43%), Gaps = 21/153 (13%)
Query: 34 YIGDTRSR-TAEYKAWLLGLLRQHGCQRV-----LDVACGTGVDSIMLVEEGFSVTSVDA 87
+I D R +YK W ++ + + LD+ACGTG + L + + +VD
Sbjct: 8 HIYDKLIRADVDYKKWSDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPKFKNTWAVDL 67
Query: 88 SDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLP 147
S +ML A + ++ +P A + ++ + FD + C +S ++
Sbjct: 68 SQEMLSEAENKFRSQGLKPRL-------ACQDISNLNINRK----FDLITCCLDSTNYII 116
Query: 148 DCKGDQSEHRLALKNIASMVRAGGLLVIDHRNY 180
D + + K +++ ++ GG+ + D +Y
Sbjct: 117 DSD----DLKKYFKAVSNHLKEGGVFIFDINSY 145
>2GLU-A nrPDB
Length = 239
Score = 56.0 bits (133), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 48/120 (40%), Gaps = 18/120 (15%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
RVLD+ G G ++ VDA+ +M++ A + E + ++
Sbjct: 23 HRVLDIGAGAGHTALAFSPYVQECIGVDATKEMVEVA----SSFAQEKGVENVRFQQGTA 78
Query: 119 MTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGL-LVIDH 177
+ +P + FD + C S+ R A++ +A +++ G L++DH
Sbjct: 79 ----ESLPFP-DDSFDIITC--------RYAAHHFSDVRKAVREVARVLKQDGRFLLVDH 125
>3CCF-A nrPDB
Length = 279
Score = 52.9 bits (125), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/180 (23%), Positives = 68/180 (37%), Gaps = 24/180 (13%)
Query: 25 GEAARVWQLYIG-DTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVT 83
G A W + D S +Y LL LL + +LD+ CGTG + + + G V
Sbjct: 24 GTAKNFWDATLYQDKHSFVWQYGEDLLQLLNPQPGEFILDLGCGTGQLTEKIAQSGAEVL 83
Query: 84 SVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSF 143
D + M++ A R++ P V A+ D P DAV N+
Sbjct: 84 GTDNAATMIEKA------RQNYPHLHFDV---ADARNFRVDKP------LDAV--FSNAM 126
Query: 144 AH-LPDCKGDQSEHRLALKNIASMVRA----GGLLVIDHRNYDHILSTGCAPPGK-NIYY 197
H + + + + ALK+ V G + I Y+ + + G P N +Y
Sbjct: 127 LHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWY 186
>5GM1-A nrPDB
Length = 297
Score = 51.4 bits (121), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/153 (18%), Positives = 56/153 (36%), Gaps = 19/153 (12%)
Query: 24 DGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLV-EEGFSV 82
D + +L ++++ Y +L+ L Q +LD+ CGTG ++ + G +V
Sbjct: 45 DAPVPQDMELVTMSSQAQD-RYTDYLIETLDPKAGQHLLDIGCGTGRTALKAARQRGIAV 103
Query: 83 TSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNS 142
T V S + + A + V + D+ FD + S
Sbjct: 104 TGVAVSKEQIAAANRLAAGHGLTERLTFEVADAMRLPYEDE--------SFDCAWAI-ES 154
Query: 143 FAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI 175
H+ + AL +++ GG L++
Sbjct: 155 LCHM--------DRAKALGEAWRVLKPGGDLLV 179
>3BUS-A nrPDB
Length = 273
Score = 50.6 bits (119), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 19/148 (12%)
Query: 31 WQLYIGDTRSRTAEYK--AWLLGLLRQHGCQRVLDVACGTGVDSIMLVE-EGFSVTSVDA 87
W+ D A + ++ LL RVLDV CG G ++ L VT +
Sbjct: 33 WEDAGADVSVDDATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISI 92
Query: 88 SDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLP 147
S + A + D+P + FDAV L S H+P
Sbjct: 93 SRPQVNQANARATAAGLANRVTFSYADA-------MDLPF-EDASFDAVWAL-ESLHHMP 143
Query: 148 DCKGDQSEHRLALKNIASMVRAGGLLVI 175
+ AL+ +A ++R GG + I
Sbjct: 144 -------DRGRALREMARVLRPGGTVAI 164
>5F8E-A nrPDB
Length = 377
Score = 50.2 bits (118), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 55/158 (34%), Gaps = 20/158 (12%)
Query: 54 RQHGCQRVLDVACGTGVDSIMLVEEG--FSVTSVDASDKMLKYALKERWNRRHEPAFDKW 111
R V D CG+G ++ + T +D SD+ + +E
Sbjct: 184 RLRSGADVADFGCGSGRAVKLMAQAFGASRFTGIDFSDEAVAAGTEEAARL----GLANA 239
Query: 112 VIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGG 171
E + LDK G +D + + D DQ++ L+NI +R GG
Sbjct: 240 TFERHDLAELDK------VGAYDVIT--------VFDAIHDQAQPARVLQNIYRALRPGG 285
Query: 172 LLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSV 209
+L++ L P Y + L +T S+
Sbjct: 286 VLLMVDIKASSQLEDNVGVPLSTYLYTTSLMHCMTVSL 323
>3SM3-A nrPDB
Length = 235
Score = 49.8 bits (117), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 9/115 (7%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMT 120
+LD+ CG+G S+ L +G+SVT +D + + ++ A P ++ +A +
Sbjct: 34 ILDIGCGSGKISLELASKGYSVTGIDINSEAIRLA----ETAARSPGLNQKTGGKAEFKV 89
Query: 121 LDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI 175
+ + FD + +PD K E +K + +++ G L +
Sbjct: 90 ENASSLSFHDSSFD-FAVMQAFLTSVPDPK----ERSRIIKEVFRVLKPGAYLYL 139
>4KDR-A nrPDB
Length = 223
Score = 49.0 bits (115), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 52/127 (40%), Gaps = 19/127 (14%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA-LKERWNRRHEPAFDKWVIEEA 116
++VLDV CG G+ + + EG +VT +D + L+ A L + + V E A
Sbjct: 63 GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHA 122
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
G +D V C+ H+PD + ++ A +V+ GG +
Sbjct: 123 A----------KHAGQYDVVTCM-EMLEHVPDPQS-------VVRACAQLVKPGGDVFFS 164
Query: 177 HRNYDHI 183
N + +
Sbjct: 165 TLNRNGV 171
>4KDC-A nrPDB
Length = 246
Score = 48.7 bits (114), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 50/123 (40%), Gaps = 19/123 (15%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYA-LKERWNRRHEPAFDKWVIEEA 116
++VLDV CG G+ + + EG +VT +D + L+ A L + + V E A
Sbjct: 63 GKKVLDVGCGGGILAESMAREGATVTGLDMGFEPLQVAKLHALESGIQVDYVQETVEEHA 122
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
G +D V C+ H+PD + ++ A +V+ GG +
Sbjct: 123 A----------KHAGQYDVVTCM-EMLEHVPDPQS-------VVRACAQLVKPGGDVFFS 164
Query: 177 HRN 179
N
Sbjct: 165 TLN 167
>3MGG-A nrPDB
Length = 276
Score = 48.3 bits (113), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 31/161 (19%)
Query: 21 QYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQH----GCQRVLDVACGTGVDSIMLV 76
+Y G + R R +E L LL +VL+ CG G +++L
Sbjct: 5 EYVHGYSER--------EALRLSEQAETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILA 56
Query: 77 EEGFS--VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFD 134
+ +TS+D S + L+ A + +AN +L + + FD
Sbjct: 57 KNNPDAEITSIDISPESLEKARENTEKN----GIKNVKFLQANIFSLPFE-----DSSFD 107
Query: 135 AVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI 175
+ + HL + ALK++ +++ GG + +
Sbjct: 108 HIF-VCFVLEHLQSPEE-------ALKSLKKVLKPGGTITV 140
>3L8D-A nrPDB
Length = 242
Score = 47.5 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 54/143 (37%), Gaps = 20/143 (13%)
Query: 27 AARVWQLYIGDT-----RSRTAEYKAWLLGLLRQHGCQR--VLDVACGTGVDSIMLVEEG 79
A + W + ++ ++ Q+ + VLDV CG G + L G
Sbjct: 16 AEKKWDSSAEFWNQNSQEMWDSGSRSTIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTG 75
Query: 80 FSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICL 139
+ VD S+ M++ + R E ++ + + + + + F+A++ +
Sbjct: 76 YKAVGVDISEVMIQKGKE-----RGEGPDLSFIKGDLSSLPFENE-------QFEAIMAI 123
Query: 140 GNSFAHLPDCKGDQSEHRLALKN 162
NS + +E + LK+
Sbjct: 124 -NSLEWTEEPLRALNEIKRVLKS 145
>4PNE-A nrPDB
Length = 302
Score = 47.5 bits (111), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 58/159 (36%), Gaps = 21/159 (13%)
Query: 20 DQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQH----GCQRVLDVACGTGVDSIML 75
+ A G A + D R+ + L L+ + G R+LDV CGTG ++ +
Sbjct: 51 NSVAGGPCAIHHGYWENDGRASWQQAADRLTDLVAERTVLDGGVRLLDVGCGTGQPALRV 110
Query: 76 V-EEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFD 134
+ +T + S + A R D ++ +P + FD
Sbjct: 111 ARDNAIQITGITVSQVQVAIAADCARERGLSHRVDFSCVDA-------MSLPYP-DNAFD 162
Query: 135 AVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLL 173
A A + SE A++ I +++ GG+L
Sbjct: 163 A--------AWAMQSLLEMSEPDRAIREILRVLKPGGIL 193
>5JE5-A nrPDB
Length = 247
Score = 47.1 bits (110), Expect = 9e-06, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 60/149 (40%), Gaps = 17/149 (11%)
Query: 40 SRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKE 98
++ A + ++ + VLD+ACG G + G V VD S+KM++ A +E
Sbjct: 24 AQRAIEVRTIFHMIGDVSGKSVLDLACGFGFFGREIYRRGAAKVVGVDISEKMIELAREE 83
Query: 99 RWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRL 158
+R++ + V + AN L G FD V A L + R
Sbjct: 84 --SRKYGDPLEFHVRDVANMEPL---------GQFDLVNA-----AWLFNYADSVENLRK 127
Query: 159 ALKNIASMVRAGGLLVIDHRNYDHILSTG 187
K + + ++ G LV + D L+ G
Sbjct: 128 MFKVVRASLKPDGKLVAYTVDPDFSLAKG 156
>2GS9-A nrPDB
Length = 211
Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 46/134 (34%), Gaps = 28/134 (20%)
Query: 43 AEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNR 102
AE + L GLL + +L+V GTG L V+ S+ ML R
Sbjct: 24 AEEERALKGLL--PPGESLLEVGAGTGYWLRRL--PYPQKVGVEPSEAMLAVG------R 73
Query: 103 RHEPAFDKWVIEEANW-MTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALK 161
R P EA W + +P FD V+ L + L
Sbjct: 74 RRAP--------EATWVRAWGEALPFP-GESFDVVL--------LFTTLEFVEDVERVLL 116
Query: 162 NIASMVRAGGLLVI 175
++R GG LV+
Sbjct: 117 EARRVLRPGGALVV 130
>4QTT-B nrPDB
Length = 208
Score = 46.0 bits (107), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 62/161 (38%), Gaps = 27/161 (16%)
Query: 22 YADGEAARVWQLYIGDTRSRTAEYKAWL--LGLLRQHGCQRVLDVACGTGVDSIMLVEEG 79
Y D EA + Y G TR + + K L L LL C +LD+ CG+G+ +L +EG
Sbjct: 14 YNDSEAHK----YTGSTRVQHIQAKMTLRALELLNLQPCSFILDIGCGSGLSGEILTQEG 69
Query: 80 FSV-TSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQS-AEGGFDAVI 137
V +D S ML L E + M D G FDA I
Sbjct: 70 DHVWCGLDISPSMLATGLSR--------------ELEGDLMLQDMGTGIPFRAGSFDAAI 115
Query: 138 CLGNSFAHLPDCKGDQSEHR----LALKNIASMVRAGGLLV 174
+ ++ L + ++ + + + ++ GG V
Sbjct: 116 SI-SAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFV 155
>5U19-A nrPDB
Length = 341
Score = 45.6 bits (106), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 60/144 (41%), Gaps = 19/144 (13%)
Query: 45 YKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRH 104
L+ L+ + G R LD+ CG+GV S++L + SV VD + + + +
Sbjct: 131 EADLLIRLMLRRGGARALDMGCGSGVLSLVLADRYESVLGVDVNPRAVALS--------- 181
Query: 105 EPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC------LGNSFAHLPDCKGDQSEHRL 158
+ + N + D+ + AEG F ++ GN F + + +
Sbjct: 182 --RLNAALNGLTNVTFREGDMFEPAEGRFSRIVFNSPTNEEGNEF--VDLLEAGEPILET 237
Query: 159 ALKNIASMVRAGGLLVIDHRNYDH 182
+N+ + +GG++ ++ D+
Sbjct: 238 FFRNVPRKLESGGIVEVNLAMNDY 261
>4NEC-A nrPDB
Length = 264
Score = 44.8 bits (104), Expect = 5e-05, Method: Composition-based stats.
Identities = 33/148 (22%), Positives = 52/148 (35%), Gaps = 21/148 (14%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFD----------- 109
VLD CGTG D++ L G++VT +D S + A + R F+
Sbjct: 63 VLDAGCGTGEDALHLAGLGYAVTGLDLSPTAISVARDKADARGLGAVFEVADALDLTGWE 122
Query: 110 ---KWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPD-----CKGDQSEHRLALK 161
VI+ T + D ++ C + AH+ Q+ A+
Sbjct: 123 ERFDTVIDSGLAHTFEGDRLRAYATALHRA-CRPGAVAHILSISDRGSAEMQARLAEAID 181
Query: 162 NIASMVRAGGLLVIDHRNYDHILSTGCA 189
I + + R+ DH L G A
Sbjct: 182 EIPAPLPDDDESPTLKRSADH-LRDGFA 208
>1RI1-A nrPDB
Length = 298
Score = 44.4 bits (103), Expect = 6e-05, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 13/159 (8%)
Query: 46 KAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRH 104
KA L+ L + G VLD+ CG G D + G VD ++ + A N +
Sbjct: 54 KACLIRLYTKRG-DSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKR 112
Query: 105 EPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIA 164
+ D+ + FD + + F+ +S +A +NIA
Sbjct: 113 RFKVFFRAQDSYGRHM---DLGK----EFDVI---SSQFSFHYAFSTSES-LDIAQRNIA 161
Query: 165 SMVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTK 203
+R GG ++ + D IL N +YK +L K
Sbjct: 162 RHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEK 200
>6MRO-A nrPDB
Length = 194
Score = 43.3 bits (100), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 17/145 (11%)
Query: 31 WQLYIGDTRSRTAEYKAWLLGLLRQHG---CQRVLDVACGTGVDSIMLVEEGFSVTSVDA 87
W T ++ L + G R LD+ CG G ++IML + G VT +D
Sbjct: 3 WDEVYKGTPPWDIDHPQPAFQALIESGEIRPGRALDIGCGRGENAIMLAKNGCDVTGIDL 62
Query: 88 SDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLP 147
+ + + + V N + +D+ E FD VI G L
Sbjct: 63 AK--RAISDAKAKAIERHVKVNFIV---GNVLEMDQLF---TEDEFDIVIDSG-----LF 109
Query: 148 DCKGDQSEHRLALKNIASMVRAGGL 172
D+ E L +++ +++ GG
Sbjct: 110 HVITDE-ERLLFTRHVHKVLKEGGK 133
>3E23-A nrPDB
Length = 211
Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 56/158 (35%), Gaps = 25/158 (15%)
Query: 25 GEAARVWQLYIGDTRSRTAEYK--AWLLGLLRQHG-CQRVLDVACGTGVDSIMLVEEGFS 81
+ Y G+ + A L L + ++L++ CG G + ++ GF
Sbjct: 8 AFDDDTLRFYRGNATAYAERQPRSATLTKFLGELPAGAKILELGCGAGYQAEAMLAAGFD 67
Query: 82 VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGN 141
V + D S ++ A +RR + + + A +DAV
Sbjct: 68 VDATDGSPELAAEA-----SRRLGRPVRTMLFHQLD-----------AIDAYDAV----- 106
Query: 142 SFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRN 179
+AH + E LK I ++ GGL +++
Sbjct: 107 -WAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143
>3EGE-A nrPDB
Length = 261
Score = 42.1 bits (97), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 29/130 (22%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAF 108
++ LL + D+ GTG S+ L +G V +V+ S M + A
Sbjct: 26 IINLLNLPKGSVIADIGAGTGGYSVALANQGLFVYAVEPSIVMRQQA------------- 72
Query: 109 DKWVIEEANWMT---LDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIAS 165
V + W T + +P + G +++ + + F+HL + + +
Sbjct: 73 --VVHPQVEWFTGYAENLALPDKSVDGVISILAI-HHFSHLE----------KSFQEMQR 119
Query: 166 MVRAGGLLVI 175
++R G ++++
Sbjct: 120 IIRDGTIVLL 129
>3DP7-A nrPDB
Length = 363
Score = 41.7 bits (96), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 13/113 (11%)
Query: 26 EAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEG--FSVT 83
+ + W + D + L + H +R+LD+ TG + V+ VT
Sbjct: 151 QVQKSW--FGFDHFYSDQSFGKALEIVFSHHP-KRLLDIGGNTGKWATQCVQYNKEVEVT 207
Query: 84 SVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAV 136
VD ++ + E I LD+DVP GFDAV
Sbjct: 208 IVDLPQQLEMMRKQTAGLSGSER------IHGHGANLLDRDVPFPT--GFDAV 252
>6G4W-q nrPDB
Length = 281
Score = 41.7 bits (96), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 57/158 (36%), Gaps = 22/158 (13%)
Query: 17 GLPDQYADGEAARVWQLYIGDTRSRTAEYKAW-----LLGLLRQHGCQRVLDVACGTGVD 71
G P+ + D AR Y+ ++R + + LL L C +LD+ CGTG+
Sbjct: 12 GPPELFYDETEARK---YVRNSRMIDIQTRMAGRALELLYLPENKPCY-LLDIGCGTGLS 67
Query: 72 SIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEG 131
L +EG +D S ML A D+ + + + + +P G
Sbjct: 68 GSYLSDEGHYWVGLDISPAMLDEA------------VDREIEGDLLLGDMGQGIPFK-PG 114
Query: 132 GFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRA 169
FD I + K ++ + AS+
Sbjct: 115 TFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSV 152
>4INE-A nrPDB
Length = 454
Score = 41.3 bits (95), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 22/123 (17%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIE 114
Q +LD+ G G + + +E G V +D S ML AL+ R HE +
Sbjct: 240 KPGQTMLDIGVGIGGGARQVADEFGVHVHGIDLSSNMLAIALE----RLHEEKDSRVKYS 295
Query: 115 EANWMTLDKDVPQSAEGGFDAVICLGNSFAHLP--DCKGDQSEHRLALKNIASMVRAGGL 172
+ + + NSF ++ DC + I ++ GG
Sbjct: 296 ITDALVYQFE---------------DNSFDYVFSRDCIQHIPDTEKLFSRIYKALKPGGK 340
Query: 173 LVI 175
++I
Sbjct: 341 VLI 343
>3JWJ-A nrPDB
Length = 202
Score = 41.3 bits (95), Expect = 5e-04, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 72/203 (35%), Gaps = 15/203 (7%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDS-IMLVEEGFS-VTSVDASDKMLKYALKERWNRRHEP 106
++ L+Q +RV+D+ CG G I+L + F +T VD S + L+ A + R
Sbjct: 11 VVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPR 70
Query: 107 AFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASM 166
++W + L G+DA + HL + L A
Sbjct: 71 --NQWERLQLIQGALTYQ--DKRFHGYDAATVI-EVIEHLDLSR--LGAFERVLFEFAQ- 122
Query: 167 VRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQ 226
++++ N ++ + P GK + D + T S Y VQ
Sbjct: 123 ---PKIVIVTTPNIEYNVKFANLPAGKLRH--KDHRFEWTRSQFQNWANKITERFAYNVQ 177
Query: 227 VPGAGQDGSPGLSKFRLSYYPHC 249
G+ S +++ + H
Sbjct: 178 FQPIGEADPEVGSPTQMAVFIHR 200
>4HTF-A nrPDB
Length = 285
Score = 41.0 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/181 (22%), Positives = 70/181 (38%), Gaps = 19/181 (10%)
Query: 8 TRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAW--LLGLLRQHGCQ--RVLD 63
T +L + + D+ D A + + G T+ + + W L +L + G Q RVLD
Sbjct: 15 TENLYFQSNAMQDRNFDDIAEKFSRNIYGTTKGQLRQAILWQDLDRVLAEMGPQKLRVLD 74
Query: 64 VACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDK 123
G G +I + E G V D S +M+ A + + + A +
Sbjct: 75 AGGGEGQTAIKMAERGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQF-IHCAAQDVASHL 133
Query: 124 DVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDHI 183
+ P F AV+ ++ R L+ + S++R GG+L + N +
Sbjct: 134 ETP-VDLILFHAVL-------------EWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGL 179
Query: 184 L 184
L
Sbjct: 180 L 180
>4KRI-A nrPDB
Length = 433
Score = 41.0 bits (94), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 45/121 (37%), Gaps = 22/121 (18%)
Query: 58 CQRVLDVACGTGVDSIMLV-EEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEA 116
QR+LD+ G G + E G V VD S ML AL ER ++ + V +
Sbjct: 223 GQRMLDIGVGIGGGARQAASEFGLQVHGVDLSTNMLAVAL-ERVHKEKDARVTYAVCDAC 281
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAHLP--DCKGDQSEHRLALKNIASMVRAGGLLV 174
+ F+ NSF ++ DC + I ++ GG ++
Sbjct: 282 EYE-------------FEP-----NSFDYVFSRDCIQHIKDTDKLFSRIYRALKPGGKVL 323
Query: 175 I 175
I
Sbjct: 324 I 324
>5BP9-A nrPDB
Length = 281
Score = 40.6 bits (93), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKY-ALKERWNRRHEPAFDKWVIEEANWM 119
+LDV G+G ++ L E G V+++D S ++ L+ + R FD
Sbjct: 105 ILDVGAGSGCHALALQESGKEVSAIDISPLSVEVMKLRGVKDARQVNLFD---------- 154
Query: 120 TLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRN 179
+ FD ++ L N G L + + ++R G +++D +
Sbjct: 155 -------ERFAATFDTILMLMNG----SGIIGRLENMPLFFRKMKQLLRPDGCILMDSSD 203
Query: 180 YDHILST 186
++
Sbjct: 204 LRYLFED 210
>3LCC-A nrPDB
Length = 235
Score = 40.6 bits (93), Expect = 0.001, Method: Composition-based stats.
Identities = 25/152 (16%), Positives = 48/152 (31%), Gaps = 17/152 (11%)
Query: 24 DGEAARVWQLYIGDT-RSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSV 82
+G + W+ I + R L+ R L CG G D + + V
Sbjct: 33 EGGWEKCWEEEITPWDQGRATPLIVHLVDT-SSLPLGRALVPGCGGGHDVVAMASPERFV 91
Query: 83 TSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNS 142
+D S+ L A + + F + W + FD +
Sbjct: 92 VGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTEL---------FDLI------ 136
Query: 143 FAHLPDCKGDQSEHRLALKNIASMVRAGGLLV 174
F ++ C + K++ +++ G L+
Sbjct: 137 FDYVFFCAIEPEMRPAWAKSMYELLKPDGELI 168
>5WP5-A nrPDB
Length = 491
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 43/121 (35%), Gaps = 19/121 (15%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIE 114
Q+VLDV CG G + E V +D S M+ +AL+ V
Sbjct: 281 KPGQKVLDVGCGIGGGDFYMAENFDVHVVGIDLSVNMISFALE------RAIGLKCSVEF 334
Query: 115 EANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLV 174
E T K P FD VI ++ H+ D + ++ GG ++
Sbjct: 335 EVADCT-TKTYPD---NSFD-VIYSRDTILHIQDKPA-------LFRTFFKWLKPGGKVL 382
Query: 175 I 175
I
Sbjct: 383 I 383
>5WP4-A nrPDB
Length = 491
Score = 39.4 bits (90), Expect = 0.002, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 19/121 (15%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIE 114
Q+VLDV CG G + E+ V +D S M+ +AL+ V
Sbjct: 281 KPGQKVLDVGCGIGGGDFYMAEKFDVHVVGIDLSVNMISFALE------RAIGLSCSVEF 334
Query: 115 EANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLV 174
E T K P FD VI ++ H+ D + ++ GG ++
Sbjct: 335 EVADCT-TKHYPD---NSFD-VIYSRDTILHIQDKPA-------LFRTFFKWLKPGGKVL 382
Query: 175 I 175
I
Sbjct: 383 I 383
>3OU6-A nrPDB
Length = 218
Score = 39.0 bits (89), Expect = 0.002, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNR---RHEPAFDKWVIEEAN 117
VL++A GTG + L VT++D S +M+ A + + R + FD + +
Sbjct: 50 VLELASGTGYWTRHLSGLADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWD 109
Query: 118 WMTLDKDVPQSAEGGFDA 135
+ + + F+A
Sbjct: 110 AVFFAHWLAHVPDDRFEA 127
>5Z9O-A nrPDB
Length = 399
Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 17/128 (13%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIMLV-EEGFSVTSVDASDKMLKYALKERWNRRHEPA 107
+L L + +LD+ CG G + E G VT V S++ K K
Sbjct: 157 ILNKLHPEKGKTLLDIGCGWGTLMLTAAKEYGLKVTGVTLSEEQYKLVQK--------KI 208
Query: 108 FDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMV 167
+D+ + + A +D + + +D V +G F H+ + K++A +
Sbjct: 209 YDEGLEDVAEVKL--EDYRELGDQQWDYVTSVG-MFEHVGSENLGE-----YFKDVAKYL 260
Query: 168 RAGGLLVI 175
+ G+ +I
Sbjct: 261 KNDGVALI 268
>4QDJ-A nrPDB
Length = 238
Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 26/96 (27%), Positives = 35/96 (36%), Gaps = 11/96 (11%)
Query: 57 GCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEA 116
V D CG G SI L + G V D S+KM+ A ++ V+
Sbjct: 62 PGLLVCDAGCGVGSLSIPLAQAGALVYGSDISEKMVGEAQQKAQE----------VLAYG 111
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGD 152
N T G +D VICL + H P +
Sbjct: 112 NQPTFMTQDLAQLGGKYDTVICL-DVLIHYPTEEAS 146
>3BKW-A nrPDB
Length = 243
Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 44/135 (32%), Gaps = 22/135 (16%)
Query: 42 TAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFS-VTSVDASDKMLKYALKERW 100
AE+ A L +L + G R++D+ CG G E G S V +D S+KML A
Sbjct: 29 AAEWPA-LRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAG- 86
Query: 101 NRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLAL 160
+ D D + FD A+ +
Sbjct: 87 -----------PDTGITYERADLDKLHLPQDSFD--------LAYSSLALHYVEDVARLF 127
Query: 161 KNIASMVRAGGLLVI 175
+ + + GG V
Sbjct: 128 RTVHQALSPGGHFVF 142
>2I6G-A nrPDB
Length = 199
Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 4/65 (6%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWM 119
R LD+ CG G +S+ L G+ VT+ D + ++ + D + +
Sbjct: 34 RTLDLGCGNGRNSLYLAANGYDVTAWDKNPA----SMANLERIKAAEGLDNLQTDLVDLN 89
Query: 120 TLDKD 124
TL D
Sbjct: 90 TLTFD 94
>5EVJ-A nrPDB
Length = 387
Score = 38.6 bits (88), Expect = 0.003, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 42/118 (35%), Gaps = 12/118 (10%)
Query: 60 RVLDVACGTGVD---SIMLVEEGFSVTSVDASDKMLKYALK-ERWNRRHEPAFDKWVIEE 115
RVLD+ G+G D + LV E SVT VD + L+ A+ R + + K +
Sbjct: 86 RVLDLGAGSGRDAYVAAKLVGEKGSVTGVDMTPAQLEVAISHADAYARDKLGYGKSNMTF 145
Query: 116 ANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLL 173
D + FD VI PD L ++ GG +
Sbjct: 146 IQGEIEYLDRAGLEDSSFDLVISNC-VINLSPDKA-------RVLSEAYRVLAPGGEM 195
>2B3T-A nrPDB
Length = 276
Score = 37.9 bits (86), Expect = 0.005, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 25/181 (13%)
Query: 16 EGLPDQYADGEAARVWQLYIGDTRSRTAEYKAW------LLGLLRQHGCQRVLDVACGTG 69
+G P + G W L + + + L L + C R+LD+ GTG
Sbjct: 64 DGEPIAHLTG-VREFWSLPLFVSPATLIPRPDTECLVEQALARLPEQPC-RILDLGTGTG 121
Query: 70 VDSIMLVEEGFS--VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQ 127
++ L E + +VD + A + A I +++W +
Sbjct: 122 AIALALASERPDCEIIAVDRMPDAVSLAQR----NAQHLAIKNIHILQSDWFSALAGQQF 177
Query: 128 -------SAEGGFDAVICLGNS----FAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
D + G+ L ++ ++ + + +GG L+++
Sbjct: 178 AMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237
Query: 177 H 177
H
Sbjct: 238 H 238
>2P35-A nrPDB
Length = 259
Score = 37.5 bits (85), Expect = 0.008, Method: Composition-based stats.
Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 25 GEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVL---DVACGTGVDSIMLVEE-GF 80
G A Q Y+ RT + LL Q +RVL D+ CG G + +L + G
Sbjct: 2 GHMAWSAQQYLKFEDERTRPARD----LLAQVPLERVLNGYDLGCGPGNSTELLTDRYGV 57
Query: 81 SV-TSVDASDKMLKYALKERWN 101
+V T +D+ D ML+ A N
Sbjct: 58 NVITGIDSDDDMLEKAADRLPN 79
>3HNR-A nrPDB
Length = 220
Score = 37.1 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 68/177 (38%), Gaps = 28/177 (15%)
Query: 11 LGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGV 70
+G GL D++A + V I A Y+ L ++ + VL+ GTG
Sbjct: 1 MGTEFNGLFDEWAHTYDSFVQGEDIQYKEVF-AHYEDILEDVVNKSFGN-VLEFGVGTGN 58
Query: 71 DSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAE 130
+ L+ G +V ++ S +M A E ++ I E ++++ +
Sbjct: 59 LTNKLLLAGRTVYGIEPSREMRMIA--------KEKLPKEFSITEGDFLSFE------VP 104
Query: 131 GGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI------DHRNYD 181
D ++ +F HL D E +A+ + ++ GG +V D YD
Sbjct: 105 TSIDTIVS-TYAFHHLTDD-----EKNVAIAKYSQLLNKGGKIVFADTIFADQDAYD 155
>5MGZ-A nrPDB
Length = 236
Score = 37.1 bits (84), Expect = 0.010, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 18/156 (11%)
Query: 21 QYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF 80
+ G A + R E+ L+G G Q V+D+ CG+G ++L
Sbjct: 4 EAITGSEAEAFHRMGSQASHRYDEFVDLLVGAGIADG-QTVVDLCCGSGELEVILSSRFP 62
Query: 81 S--VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC 138
S + VD S+ M++ A R + ++ +A + +D+ A+ ++
Sbjct: 63 SLNLVGVDLSEDMVRIA---REYAAEQGKALEFRHGDAQLLAGMEDLAGKAD-----LVV 114
Query: 139 LGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLV 174
N+F L A + + + GG ++
Sbjct: 115 SRNAFHRLTRLPA-------AFDTMLRLAKPGGAVL 143
>6DCC-A nrPDB
Length = 309
Score = 36.7 bits (83), Expect = 0.011, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Query: 109 DKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVR 168
+ V N++ D+ ++ +D V+CL + + GD+ + + I +R
Sbjct: 171 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLT-KWVHLNWGDEG-LKRMFRRIYRHLR 228
Query: 169 AGGLLVID 176
GG+LV++
Sbjct: 229 PGGILVLE 236
>2PJD-A nrPDB
Length = 343
Score = 36.7 bits (83), Expect = 0.014, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 42/130 (32%), Gaps = 19/130 (14%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSV--TSVDASDKMLKYALKERWNRRHEP 106
LL L H +VLDV CG GV S+ + T D S ++ + E
Sbjct: 188 LLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEG 247
Query: 107 AFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLAL-KNIAS 165
+V +G FD +I S D + L +
Sbjct: 248 EV------------FASNVFSEVKGRFDMII----SNPPFHDGMQTSLDAAQTLIRGAVR 291
Query: 166 MVRAGGLLVI 175
+ +GG L I
Sbjct: 292 HLNSGGELRI 301
>5E72-A nrPDB
Length = 346
Score = 36.3 bits (82), Expect = 0.015, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 10/119 (8%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
+ +LD G G I G V VD +M++ A + ++ +
Sbjct: 181 REILDPFMGAGGILIEAGLLGLRVYGVDIRPEMVEGA----ETNLKHYGVRDYTLKLGDA 236
Query: 119 MTLDKDVPQSAEGGFDAVIC--LGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI 175
L+ P F+AV + A L K D+ +R AL++I +++ GG L I
Sbjct: 237 TRLEDLFPDK---KFEAVATDPPYGTAATLAGRKRDEL-YRKALRSIYNVLEDGGRLAI 291
>4HGY-A nrPDB
Length = 276
Score = 36.3 bits (82), Expect = 0.015, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 16/123 (13%)
Query: 59 QRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
+ VL++ GTG + L + G V V++S+ ML K R P + V N+
Sbjct: 64 RPVLELGVGTGRVAFPLADLGVEVHGVESSEPMLD---KLREKAAAHPNGNLVVPVLGNF 120
Query: 119 MTLD--KDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
LD + F+ + CL Q E ++ ++ GG V+
Sbjct: 121 AKLDLGEQRYSVVFAAFNTLFCLLG-----------QDEQIDCMRQARELLEPGGTFVVQ 169
Query: 177 HRN 179
N
Sbjct: 170 CLN 172
>5M58-A nrPDB
Length = 230
Score = 36.3 bits (82), Expect = 0.016, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFS--VTSVDASDKMLKYALKERWNRRHEPAF 108
Q V+D+ CG+G I+L S + VD S+ M++ A + E F
Sbjct: 40 GQTVVDLCCGSGELEIILTSRFPSLNLVGVDLSEDMVRIARDYAAEQGKELEF 92
>5I2H-A nrPDB
Length = 364
Score = 36.3 bits (82), Expect = 0.017, Method: Composition-based stats.
Identities = 30/166 (18%), Positives = 59/166 (35%), Gaps = 21/166 (12%)
Query: 27 AARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVD 86
A R W + A +L + +LDVA G+G+ ++ ++++ + +
Sbjct: 166 AGRAWNVAPRFADVLPAGQPGKILKDNSGSSGRVLLDVAGGSGIYTMAVLQKYPTWRGII 225
Query: 87 AS-DKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAH 145
++LK A + + + A M +D P I L N
Sbjct: 226 FDRPEVLKIAAELAE----QTGVRDRLELHAGDMWVD---PFPPADD----ILLSNVL-- 272
Query: 146 LPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTGCAPP 191
D+ + + S + GG L+I +D +L++ P
Sbjct: 273 ---HDWDRPQCARLVAKATSGLPEGGRLLI----HDVLLNSDLTGP 311
>1VBF-A nrPDB
Length = 231
Score = 35.9 bits (81), Expect = 0.019, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 46 KAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALK 97
++L L H Q+VL++ G G + ++ E V SV+ ++KM YA K
Sbjct: 59 GIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVDKVVSVEINEKMYNYASK 110
>4FS8-A nrPDB
Length = 383
Score = 35.6 bits (80), Expect = 0.024, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 14/137 (10%)
Query: 58 CQRVLDVACGTGVD----SIMLVEEGFSVTSVDASDKMLKYALKERWNRRHE--PAFDKW 111
VLD+ CGTG D S ++ E G V VD D L+ A K + + +
Sbjct: 84 GATVLDLGCGTGRDVYLASKLVGEHG-KVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRS 142
Query: 112 VIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLAL-KNIASMVRAG 170
+ + + +V + + +C + S ++LAL K I ++R G
Sbjct: 143 NVRFLKGFIENLATAEPEGVPDSSVDIV------ISNCVCNLSTNKLALFKEIHRVLRDG 196
Query: 171 GLLVIDHRNYDHILSTG 187
G L D LS
Sbjct: 197 GELYFSDVYADRRLSEA 213
>2YR0-A nrPDB
Length = 263
Score = 35.6 bits (80), Expect = 0.025, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 20/114 (17%)
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVI-EEANWMT 120
L++ GTG ++ L+ G+ ++DA ML+ R+ D+ V +A+
Sbjct: 44 LELGVGTGRIALPLIARGYRYIALDADAAMLEV------FRQKIAGVDRKVQVVQADARA 97
Query: 121 LDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLV 174
+P E ++ HL D L +++ GG L+
Sbjct: 98 ----IPLPDESVHGVIVV------HLWHLVPDWP---KVLAEAIRVLKPGGALL 138
>1TPY-A nrPDB
Length = 287
Score = 35.2 bits (79), Expect = 0.035, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 40/130 (30%), Gaps = 24/130 (18%)
Query: 50 LGLLRQHGCQRVLDVACGTGVDSIM-LVEEGFSVTSVDASD---KMLKYALKERWNRRHE 105
LG L +LD+ CG G + + +V + S ++ + E R
Sbjct: 57 LGKLGLQPGMTLLDIGCGWGATMRRAIAQYDVNVVGLTLSKNQAAHVQKSFDEMDTPRDR 116
Query: 106 PAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIAS 165
A W ++ V D ++ +G D D
Sbjct: 117 RVLL------AGWEQFNEPV--------DRIVSIGAFEHFGHDRHADF------FARAHK 156
Query: 166 MVRAGGLLVI 175
++ G+L++
Sbjct: 157 ILPPDGVLLL 166
>3HEM-A nrPDB
Length = 302
Score = 34.8 bits (78), Expect = 0.042, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 45/126 (35%), Gaps = 15/126 (11%)
Query: 53 LRQHGCQRVLDVACGTGVDSIM-LVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKW 111
L +LD+ CG G + E +V + S+ +YA + + K
Sbjct: 68 LNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSEN--QYAHDKAMFDEVDSPRRKE 125
Query: 112 VIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHR--LALKNIASMVRA 169
V + + D P D ++ LG +F H D GD R K ++
Sbjct: 126 VRIQG---WEEFDEP------VDRIVSLG-AFEHFADGAGDAGFERYDTFFKKFYNLTPD 175
Query: 170 GGLLVI 175
G +++
Sbjct: 176 DGRMLL 181
>2VS1-A nrPDB
Length = 425
Score = 34.8 bits (78), Expect = 0.042, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 31/76 (40%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEAN 117
+++LD+ G G I L + GF+V D+++ ++ A + + F+ E +
Sbjct: 291 GEKILDMYSGVGTFGIYLAKRGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREVS 350
Query: 118 WMTLDKDVPQSAEGGF 133
D + G
Sbjct: 351 VKGFDTVIVDPPRAGL 366
>4KIC-A nrPDB
Length = 357
Score = 34.8 bits (78), Expect = 0.043, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 7/111 (6%)
Query: 61 VLDVACGTGVDSIMLVEEGFSV--TSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
V D+ G+G I + V VD +D + A KE + +
Sbjct: 182 VADLGSGSGERLIQIARRFPGVRGLGVDIADGAIAMAEKEVAAKGFGDQISFV---RGDA 238
Query: 119 MTLDKDVPQSAEGGFDAVIC--LGNSFAHLPDCKGDQSEHRLALKNIASMV 167
T+D+ + D + C +G+ F +C + R A N+ +
Sbjct: 239 RTIDQVSARGEFAEVDLLTCFMMGHDFWPRENCVQTLRKLRAAFPNVRRFL 289
>4DZR-A nrPDB
Length = 215
Score = 34.8 bits (78), Expect = 0.044, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 30/74 (40%), Gaps = 6/74 (8%)
Query: 58 CQRVLDVACGTG--VDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEE 115
RV+DV G+G SI L G SVT+VD S L A R N A W +
Sbjct: 31 GTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVA---RRNAERFGAVVDWAAAD 87
Query: 116 A-NWMTLDKDVPQS 128
W+ + +
Sbjct: 88 GIEWLIERAERGRP 101
>1NKV-A nrPDB
Length = 256
Score = 34.8 bits (78), Expect = 0.048, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 18/135 (13%)
Query: 42 TAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLV-EEGFSVTSVDASDKMLKYALKERW 100
T E A L +LR R+LD+ G+G + G + T +D S A +
Sbjct: 21 TEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAE 80
Query: 101 NRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLAL 160
+ A A D C+G + E
Sbjct: 81 ELGVSERVHFIHNDAA---------GYVANEKCDVAACVGA--TWIAGGFAGAEEL---- 125
Query: 161 KNIASMVRAGGLLVI 175
+A ++ GG+++I
Sbjct: 126 --LAQSLKPGGIMLI 138
>1UWV-A nrPDB
Length = 433
Score = 34.8 bits (78), Expect = 0.049, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 9/87 (10%)
Query: 53 LRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWV 112
L RVLD+ CG G ++ L + SV V+ +++ + N R +
Sbjct: 282 LDVQPEDRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQ---NARLNGLQNVTF 338
Query: 113 IEEANWMTLDKDVPQS--AEGGFDAVI 137
E L++DV + A+ GFD V+
Sbjct: 339 YHEN----LEEDVTKQPWAKNGFDKVL 361
>4P7C-A nrPDB
Length = 322
Score = 34.4 bits (77), Expect = 0.057, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 18/120 (15%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFS-VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEA 116
+RVLDV CG G ++ G V VD + + + + +R+ P W + A
Sbjct: 122 GKRVLDVGCGNGYYQWRMLGAGADSVIGVDPN---WLFFCQFQAMQRYLPDLPAWHLPFA 178
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVID 176
+D+P + EG FD V +G + + +H LALK+ + GG LV++
Sbjct: 179 L-----EDLPANLEG-FDTVFSMG-----VLYHRKSPIDHLLALKDC---LVKGGELVME 224
>3MCZ-A nrPDB
Length = 352
Score = 34.4 bits (77), Expect = 0.058, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 54/154 (35%), Gaps = 26/154 (16%)
Query: 34 YIGDTRSRTAEYKAWL------LGLLRQHG----CQRVLDVACGTGVDSIMLVEEGFSVT 83
+ DTR+R A A + + ++ + G + V+D+A G G ++ +T
Sbjct: 146 FAHDTRARDAFNDAMVRLSQPMVDVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLT 205
Query: 84 SV--DASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGN 141
D A K + + + + GG V+ L +
Sbjct: 206 GQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE--------GGAADVVMLND 256
Query: 142 SFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI 175
+ D E R + + A +V+ GG L+I
Sbjct: 257 CLHYF-----DAREAREVIGHAAGLVKPGGALLI 285
>3M70-A nrPDB
Length = 286
Score = 34.4 bits (77), Expect = 0.068, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 60 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERW 100
+VLD+ CG G +S+ L G+ VTS D ++ + + + +
Sbjct: 123 KVLDLGCGQGRNSLYLSLLGYDVTSWDHNENSIAFLNETKE 163
>3G5T-A nrPDB
Length = 299
Score = 34.0 bits (76), Expect = 0.071, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 17/122 (13%)
Query: 59 QRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRH-EPAFDKWVIE 114
+ ++DV CG G ++ + +E + D S M+K A + +
Sbjct: 38 KLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISS 97
Query: 115 EANWMTLDKD-VPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLL 173
++ L D V + AV C AH D + Q ++ + +R G +
Sbjct: 98 SDDFKFLGADSVDKQKIDMITAVEC-----AHWFDFEKFQ-------RSAYANLRKDGTI 145
Query: 174 VI 175
I
Sbjct: 146 AI 147
>4YMH-A nrPDB
Length = 240
Score = 34.0 bits (76), Expect = 0.076, Method: Composition-based stats.
Identities = 14/88 (15%), Positives = 37/88 (42%), Gaps = 5/88 (5%)
Query: 15 AEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIM 74
+ G+PD + + D + + +W++ R +R+L++ C +G ++
Sbjct: 24 SHGIPDALVEHWEWTRTRFPDAD-KMSSRLQGSWMIFTARDRKPKRILEIGCYSGYSALA 82
Query: 75 LVE----EGFSVTSVDASDKMLKYALKE 98
E + +++ S KM+ + +
Sbjct: 83 WYEGTRDTKAEIVTLEYSPKMIAASREA 110
>1WXW-A nrPDB
Length = 382
Score = 34.0 bits (76), Expect = 0.081, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 12/120 (10%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEAN 117
+R LDV G ++ L V +VD+S + AL+ + EAN
Sbjct: 210 GERALDVFSYAGGFALHLALGFREVVAVDSSAE----ALRRAEENARLNGLGNVRVLEAN 265
Query: 118 WMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKN----IASMVRAGGLL 173
L + + + FD V+ +FA K D A K +++ GG+L
Sbjct: 266 AFDLLRRL-EKEGERFDLVVLDPPAFA---KGKKDVERAYRAYKEVNLRAIKLLKEGGIL 321
>3JWI-A nrPDB
Length = 207
Score = 34.0 bits (76), Expect = 0.082, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 9/106 (8%)
Query: 48 WLLGLLRQHGCQRVLDVACGTG-VDSIMLVEEGFS-VTSVDASDKMLKYALKERWNRR-H 104
++ +L+ ++V+D+ CG G + S++L ++ F +T VD S +L+ A R
Sbjct: 18 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLP 77
Query: 105 EPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCK 150
E + + +++ + DK G+DA + HL + +
Sbjct: 78 EMQRKRISLFQSSLVYRDKRF-----SGYDAATVI-EVIEHLDENR 117
>6BQC-A nrPDB
Length = 383
Score = 34.0 bits (76), Expect = 0.083, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 35/183 (19%)
Query: 31 WQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACG-TGVDSIMLVEEGFSVTSVDASD 89
W+ ++ A+ K + L+ RVLD+ CG G+ M SV V S
Sbjct: 143 WKDADNLESAQQAKLK-MICEKLQLKPGMRVLDIGCGWGGLAHYMASNYDVSVVGVTISA 201
Query: 90 KMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDC 149
+ K A + D ++ + ++ L+ FD ++ +G F H+
Sbjct: 202 EQQKMAQERCE------GLDVTILLQ-DYRDLN--------DQFDRIVSVG-MFEHVGPK 245
Query: 150 KGDQSEHRLALKNIASMVRAGGLLVI-------DHRNYD-----HILSTGCAPPGKNIYY 197
D + ++ G+ ++ N D +I GC P + I
Sbjct: 246 NYDT-----YFAVVDRNLKPEGIFLLHTIGSKKTDLNVDPWINKYIFPNGCLPSVRQIAQ 300
Query: 198 KSD 200
S+
Sbjct: 301 SSE 303
>4RYL-A nrPDB
Length = 340
Score = 34.0 bits (76), Expect = 0.083, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
Query: 39 RSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALK 97
+ RT Y+ ++ + VLDV CGTG+ S+ + G V VD S ++L A+
Sbjct: 46 KIRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQS-EILYQAMD 104
Query: 98 ERWNRRHEPAFD 109
+ E
Sbjct: 105 IIRLNKLEDTIT 116
>1N2X-A nrPDB
Length = 301
Score = 34.0 bits (76), Expect = 0.086, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 35/88 (39%), Gaps = 2/88 (2%)
Query: 49 LLGLLRQHGCQRVLDVACGTGVDSIMLVEE--GFSVTSVDASDKMLKYALKERWNRRHEP 106
++ L+ + +LD G G S ++E G + +D ++L+ A ++
Sbjct: 18 VIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRV 77
Query: 107 AFDKWVIEEANWMTLDKDVPQSAEGGFD 134
+ K EA+++ + + D
Sbjct: 78 SLFKVSYREADFLLKTLGIEKVDGILMD 105
>5EGS-A nrPDB
Length = 376
Score = 33.6 bits (75), Expect = 0.091, Method: Composition-based stats.
Identities = 35/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 32 QLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDK 90
+ I D R RT Y+ +L + VLDV GTG+ SI + G V +V+AS
Sbjct: 59 EEMIAD-RVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEAS-- 115
Query: 91 MLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC--LGNSFAHLPD 148
+ R R D+ + ++P+ DA++ +G H
Sbjct: 116 --AIWQQAREVVRFNGLEDR--VHVLPGPVETVELPEQV----DAIVSEWMGYGLLH--- 164
Query: 149 CKGDQSEHRLALKNIASMVRAGGLLV 174
+S L ++ GGLL+
Sbjct: 165 ----ESMLSSVLHARTKWLKEGGLLL 186
>1L3B-A nrPDB
Length = 192
Score = 33.6 bits (75), Expect = 0.10, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 51/135 (37%), Gaps = 20/135 (14%)
Query: 42 TAEYKAWLLGLLRQHGCQRVL-DVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERW 100
TA L+ L + G V DV CGTG ++ L V ++D + + + E
Sbjct: 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPE--AISTTEMN 74
Query: 101 NRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLAL 160
+RH N ++ D P++ D I + G E + L
Sbjct: 75 LQRHGLG--------DNVTLMEGDAPEALCKIPDIDIAVVG---------GSGGELQEIL 117
Query: 161 KNIASMVRAGGLLVI 175
+ I ++ GG +++
Sbjct: 118 RIIKDKLKPGGRIIV 132
>5W7M-A nrPDB
Length = 312
Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 37/171 (21%)
Query: 14 AAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSI 73
A +G+ D Y A ++ + Y D + ++ L L+ +LD+ACGTGV S
Sbjct: 36 AGKGILDTYM--VAEKITRYYTQDLIQLSGLSESSLTPLV-------ILDLACGTGVVSD 86
Query: 74 MLVEE-------GFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVP 126
L + + +T D S ++ + ++ R E + K V + + ++P
Sbjct: 87 ALHDMLNFQPKGNWELTCGDISTELTGHVKQKILERGWENSIAKVVDAQ------NTELP 140
Query: 127 QSAEGGFDAVICLGNSFAHLPDCKG--DQSEHRLALKNIASMVRAGGLLVI 175
+ H+ + A+K + +++ GG L I
Sbjct: 141 -------------TGHYTHVFAALAFTSFPDTYAAMKEVMRILQPGGTLTI 178
>5X7F-A nrPDB
Length = 235
Score = 33.6 bits (75), Expect = 0.11, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 21/175 (12%)
Query: 7 RTRSLGVAAEGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVAC 66
R SL AEG + AR IG + T A L L + G + V +V
Sbjct: 29 RGESLWAHAEGSISEDVILAGARERATDIG-AGAVTPAVGALLCLLAKLSGGKAVAEVGT 87
Query: 67 GTGVDSIMLVEEGFS---VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDK 123
G GV + L+ +T++D + L+ A + P+ + + A +
Sbjct: 88 GAGVSGLWLLSGMRDDGVLTTIDIEPEHLRLARQAFAEAGIGPSRTRLISGRAQEV---- 143
Query: 124 DVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHR 178
+ + A+ +D V D + + ++R+GG++V+ HR
Sbjct: 144 -LTRLADASYDLVFI-----------DADPIDQPDYVAEGVRLLRSGGVIVV-HR 185
>1G6Q-1 nrPDB
Length = 328
Score = 33.2 bits (74), Expect = 0.12, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 32 QLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFS-VTSVDAS 88
+ + DT RT Y+ ++ + VLDV CGTG+ S+ + G V VD S
Sbjct: 14 EEMLQDT-VRTLSYRNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS 70
>6CU3-A nrPDB
Length = 336
Score = 33.2 bits (74), Expect = 0.12, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 48/138 (34%), Gaps = 12/138 (8%)
Query: 41 RTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFS-VTSVDASDKMLKYALKER 99
RT YK +L + VLD+ CGTG+ + + G V +D SD + K
Sbjct: 35 RTNAYKNAILQNKHLFKDKVVLDIGCGTGILCLFAAKAGAKRVIGIDMSDIIDKARQIVS 94
Query: 100 WNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLA 159
N VIE +D+ Q G I + + +S +
Sbjct: 95 DNGYSH------VIELIKGKV--EDIAQLPFGIEKVDIIISEWMGYFLLY---ESMLQTV 143
Query: 160 LKNIASMVRAGGLLVIDH 177
L +R GG L D
Sbjct: 144 LSARDRWLRPGGYLFPDK 161
>1X1B-A nrPDB
Length = 359
Score = 33.2 bits (74), Expect = 0.13, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 53/154 (34%), Gaps = 26/154 (16%)
Query: 50 LGLLRQH----GCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHE 105
+ LL + G ++++DV G G S +++ + S + L A+ E
Sbjct: 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILN---LPGAIDLVNENAAE 235
Query: 106 PAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIAS 165
+ D+ + + DAV L + + + + A +
Sbjct: 236 KGV------ADRMRGIAVDIYKESYPEADAV--LFCRILYSANEQLSTIMCKKAFDAM-- 285
Query: 166 MVRAGGLLVIDHRNYDHILSTGCAPPGKNIYYKS 199
R+GG L+I D ++ P N Y S
Sbjct: 286 --RSGGRLLI----LDMVIDD---PENPNFDYLS 310
>3I9F-A nrPDB
Length = 170
Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 29/146 (19%)
Query: 46 KAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHE 105
+ +L + ++D CG G L+E + +D + ALKE +
Sbjct: 7 EEYLPNIFEGKKG-VIVDYGCGNGFYCKYLLEFATKLYCIDIN----VIALKEV-----K 56
Query: 106 PAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIAS 165
FD + ++ K++P ++ I NSF + D + SE + LK+
Sbjct: 57 EKFDSVIT-----LSDPKEIPDNSVD----FILFANSFHDMDDKQHVISEVKRILKD--- 104
Query: 166 MVRAGGLLVIDHRNYDHILSTGCAPP 191
G +++ID R + TG PP
Sbjct: 105 ---DGRVIIIDWRKEN----TGIGPP 123
>5LV5-A nrPDB
Length = 403
Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 34/146 (23%), Positives = 56/146 (38%), Gaps = 21/146 (14%)
Query: 32 QLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDK 90
+ I D + RT Y+ +L + VLDV GTG+ SI + G V +V+AS
Sbjct: 86 EEMIAD-QVRTEAYRLGILKNWAALRGKTVLDVGAGTGILSIFCAQAGARRVYAVEAS-- 142
Query: 91 MLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC--LGNSFAHLPD 148
+ R R D+ + ++P+ DA++ +G H
Sbjct: 143 --AIWQQAREVVRLNGLEDR--VHVLPGPVETVELPERV----DAIVSEWMGYGLLH--- 191
Query: 149 CKGDQSEHRLALKNIASMVRAGGLLV 174
+S L ++ GGLL+
Sbjct: 192 ----ESMLSSVLHARTKWLKEGGLLL 213
>3BKX-A nrPDB
Length = 275
Score = 33.2 bits (74), Expect = 0.14, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 16/159 (10%)
Query: 16 EGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIML 75
+ + D A G A + T R A +AW + +++L++ CG G S +L
Sbjct: 7 DYITDLMALGPTANARTIQRRQTAHRLAIAEAWQV-----KPGEKILEIGCGQGDLSAVL 61
Query: 76 VEEGFS---VTSVD-ASDKMLK-YALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAE 130
++ S VT +D AS L + WN + N D D+ A+
Sbjct: 62 ADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSD-DLGPIAD 120
Query: 131 GGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRA 169
FD V+ AH + L KN+A++
Sbjct: 121 QHFDRVV-----LAHSLWYFASANALALLFKNMAAVCDH 154
>1KP9-A nrPDB
Length = 287
Score = 32.9 bits (73), Expect = 0.19, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 46/127 (36%), Gaps = 18/127 (14%)
Query: 50 LGLLRQHGCQRVLDVACGTGVDSIMLVEEG-FSVTSVDASDKMLKYALKERWNRRHEPAF 108
LG L +LDV CG G + VE+ +V + S + + N +
Sbjct: 57 LGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSEN---L 113
Query: 109 DKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVR 168
+ A W D+ V D ++ +G +F H + D ++
Sbjct: 114 RSKRVLLAGWEQFDEPV--------DRIVSIG-AFEHFGHERYDA-----FFSLAHRLLP 159
Query: 169 AGGLLVI 175
A G++++
Sbjct: 160 ADGVMLL 166
>1F3L-A nrPDB
Length = 321
Score = 32.9 bits (73), Expect = 0.20, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Query: 39 RSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALK 97
+ RT Y+ ++ + VLDV CGTG+ S+ + G V +VD S ++L A+
Sbjct: 27 KVRTESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVIAVDQS-EILYQAMD 85
Query: 98 ERWNRRHE 105
+ E
Sbjct: 86 IIRLNKLE 93
>5BP7-A nrPDB
Length = 271
Score = 32.5 bits (72), Expect = 0.21, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 18/130 (13%)
Query: 47 AWLLGLLRQHGCQRVLDVACGTGVDSIMLV-EEGFSVTSVDASDKMLKYALKERWNRRHE 105
L LR RVLD+ G+G + G T +D S A
Sbjct: 49 TTLGAALRLEPGTRVLDLGSGSGEMLCTWARDHGIIGTGIDMSQLFTAQAKLRAEELGVA 108
Query: 106 PAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIAS 165
+ + +++ DK A + + E +A
Sbjct: 109 DRVTFIHGDASGYVSDDK-----------AGVAACVGATWIGGGVAGTIEL------LAR 151
Query: 166 MVRAGGLLVI 175
+R GG+++I
Sbjct: 152 SLRPGGIILI 161
>2XVM-A nrPDB
Length = 199
Score = 32.1 bits (71), Expect = 0.27, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 5/57 (8%)
Query: 35 IGDTRSRTAEYKAWLLGLLRQHGCQ-----RVLDVACGTGVDSIMLVEEGFSVTSVD 86
I D T +Y+ + + LD+ CG G +S+ L G+ V + D
Sbjct: 5 IRDENYFTDKYELTRTHSEVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGYDVDAWD 61
>4HG2-A nrPDB
Length = 257
Score = 32.1 bits (71), Expect = 0.28, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 35/103 (33%), Gaps = 17/103 (16%)
Query: 62 LDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
LD CG+G S+ L E V +VD + ++ AL P V +
Sbjct: 44 LDCGCGSGQASLGLAEFFERVHAVDPGEAQIRQAL-------RHPRVTYAVAPAEDTG-- 94
Query: 122 DKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIA 164
+P ++ + + H D +E R + A
Sbjct: 95 ---LPPASVD-----VAIAAQAMHWFDLDRFWAELRRVARPGA 129
>5JMQ-A nrPDB
Length = 446
Score = 32.1 bits (71), Expect = 0.29, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 20 DQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEG 79
++Y D L + + RT +Y + +L + +LDV CGTG+ S+
Sbjct: 113 EEYFDSYGTLKLHLEMLADQPRTTKYHSVILQNKESLKDKVILDVGCGTGIISLFCAHHA 172
Query: 80 --FSVTSVDASD 89
+V +V+ASD
Sbjct: 173 RPKAVYAVEASD 184
>1Q2L-A nrPDB
Length = 939
Score = 32.1 bits (71), Expect = 0.30, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 65/200 (32%), Gaps = 39/200 (19%)
Query: 16 EGLPDQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIML 75
+G+ QY D A + + + +R +Y WL + + + LD
Sbjct: 359 KGIDKQYFDELANVLDIDFRYPSITRDMDYVEWLADTMIRVPVEHTLD------------ 406
Query: 76 VEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDA 135
+V+ +D+ A+K E W K+ DA
Sbjct: 407 --------AVNIADRYDAKAVK-------ERLAMMTPQNARIWYISPKEPHNKTAYFVDA 451
Query: 136 VICLGNSFAHLP-DCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDH---ILSTG---- 187
+ A D + ++ L+L + + L+ + YDH I+
Sbjct: 452 PYQVDKISAQTFADWQKKAADIALSLPELNPYIPDDFSLIKSEKKYDHPELIVDESNLRV 511
Query: 188 -CAPPGKNIYYKSDLTKDVT 206
AP + Y+ S+ DV+
Sbjct: 512 VYAP---SRYFASEPKADVS 528
>3DMF-A nrPDB
Length = 381
Score = 32.1 bits (71), Expect = 0.31, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 25/124 (20%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVD---ASDKMLKYALKERWNRRH--EPAFDKWV 112
++VLD+ G G ++ L G V V+ AS L+ L+ + D+ +
Sbjct: 234 GRQVLDLGAGYGALTLPLARMGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEAL 293
Query: 113 IEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKN-IASMVRAGG 171
EEA + + + P G AVI + A N A+ +R GG
Sbjct: 294 TEEARFDIIVTNPPFHVGG---AVIL----------------DVAQAFVNVAAARLRPGG 334
Query: 172 LLVI 175
+ +
Sbjct: 335 VFFL 338
>3SVZ-A nrPDB
Length = 263
Score = 32.1 bits (71), Expect = 0.33, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Query: 60 RVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKY 94
++ D+ CGTG ++ L + +T +D ++
Sbjct: 55 KIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEI 90
>6GKZ-A nrPDB
Length = 351
Score = 31.7 bits (70), Expect = 0.40, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEAN 117
Q VLD+ CG G ++ + ++ + ++ + + E +RR ++ A+
Sbjct: 124 GQSVLDLGCGQGALTLHVAQKYKNCRVTAVTNSVSQKEYIEEESRRRN--LLNVEVKLAD 181
Query: 118 WMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVIDH 177
T + +D ++ + F H+ + + L L+ I+ + GLL ++H
Sbjct: 182 ITTHEM------AETYDRILVI-ELFEHMKNYE-------LLLRKISEWISKDGLLFLEH 227
>4AZW-A nrPDB
Length = 471
Score = 31.3 bits (69), Expect = 0.48, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMT 120
VLD+ C G S+ L +G ++ +D + + A E
Sbjct: 70 VLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAA-------EFRVGR 122
Query: 121 LDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIA 164
+++ + EG FD + +G S H E + L +A
Sbjct: 123 IEEVIAALEEGEFD--LAIGLSVFHHIVHLHGIDEVKRLLSRLA 164
>4AZV-A nrPDB
Length = 569
Score = 31.3 bits (69), Expect = 0.48, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMT 120
VLD+ C G S+ L +G ++ +D + + A E
Sbjct: 70 VLDLGCAQGFFSLSLASKGATIVGIDFQQENINVCRALAEENPDFAA-------EFRVGR 122
Query: 121 LDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIA 164
+++ + EG FD + +G S H E + L +A
Sbjct: 123 IEEVIAALEEGEFD--LAIGLSVFHHIVHLHGIDEVKRLLSRLA 164
>1P91-A nrPDB
Length = 269
Score = 31.3 bits (69), Expect = 0.52, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 44 EYKAWLLGLLRQH---GCQRVLDVACGTGVDSIMLVEEGFSVT--SVDASDKMLKYALK 97
+ ++ LR+ VLD+ CG G + + +T +D S +K A K
Sbjct: 69 PLRDAIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAK 127
>2HNK-A nrPDB
Length = 239
Score = 30.6 bits (67), Expect = 0.82, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 4/75 (5%)
Query: 38 TRSRTAEYKAWLLGLLRQ-HGCQRVLDVACGTGVDSIMLVEEGFS---VTSVDASDKMLK 93
+ + + L +L + G +R++++ TG S+ + D S++
Sbjct: 40 ANMQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTN 99
Query: 94 YALKERWNRRHEPAF 108
A K E
Sbjct: 100 VARKYWKENGLENKI 114
>4QNV-A nrPDB
Length = 323
Score = 30.6 bits (67), Expect = 0.83, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 37 DTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFS-VTSVDASDKML 92
DT R+ +L L + +LDV CG+G ++ G +D + L
Sbjct: 102 DTEWRSDWKWDRVLPHLSDLTGRTILDVGCGSGYHMWRMIGAGAHLAVGIDPTQLFL 158
>4DCM-A nrPDB
Length = 375
Score = 30.6 bits (67), Expect = 0.84, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 32/80 (40%), Gaps = 9/80 (11%)
Query: 61 VLDVACGTGVDSIMLVEEGFS--VTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANW 118
++D+ CG GV + L+++ V VD S + + E A D+
Sbjct: 226 IVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPE-ALDRC------E 278
Query: 119 MTLDKDVPQSAEGGFDAVIC 138
++ + F+AV+C
Sbjct: 279 FMINNALSGVEPFRFNAVLC 298
>5KPG-A nrPDB
Length = 397
Score = 30.6 bits (67), Expect = 0.86, Method: Composition-based stats.
Identities = 14/71 (19%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 34 YIGDTRSRTAEYKAWLLGLLRQHG----CQRVLDVACGTGVDSIMLVE--EGFSVTSVDA 87
Y D + E + +++ L + Q +LD+ CG G ++ + + G VT +
Sbjct: 141 YFKDESTTLDESEVYMMDLYCERAQIKDGQSILDLGCGHGSLTLHVAQKYRGCKVTGITN 200
Query: 88 SDKMLKYALKE 98
S ++ + +
Sbjct: 201 SVSQKEFIMDQ 211
>3CJR-A nrPDB
Length = 254
Score = 30.6 bits (67), Expect = 0.88, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 20/53 (37%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAF 108
+VLD+ G+GV +I + G VD +L A P F
Sbjct: 119 RPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGVRPRF 171
>3V8V-A nrPDB
Length = 702
Score = 30.2 bits (66), Expect = 1.0, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 11/140 (7%)
Query: 58 CQRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEA 116
+ L++ TG ++ G S T+VD S L++A + + + +
Sbjct: 539 GKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADC 598
Query: 117 NWMTLDKDVPQSAEGGFDAVICLGNSFAH---LPDCKGDQSEHRLALKNIASMVRAGGLL 173
+ A FD + +F++ + D Q +H +K++ ++RAGG +
Sbjct: 599 LAWLRE------ANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTI 652
Query: 174 VIDHRNYDHILS-TGCAPPG 192
+ + + G A G
Sbjct: 653 MFSNNKRGFRMDLDGLAKLG 672
>1VQ1-A nrPDB
Length = 294
Score = 30.2 bits (66), Expect = 1.1, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 9/111 (8%)
Query: 15 AEGLPDQYADGE-----AARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTG 69
A G P Y GE + + + + R T E L L+R++G + V D+ G+G
Sbjct: 86 ASGYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRKYGIKTVADIGTGSG 145
Query: 70 VDSIMLVEEGFSVT-SVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWM 119
+ + + ++ + D S K ++ A K N D++ + + ++
Sbjct: 146 AIGVSVAKFSDAIVFATDVSSKAVEIARK---NAERHGVSDRFFVRKGEFL 193
>1PJZ-A nrPDB
Length = 203
Score = 29.8 bits (65), Expect = 1.5, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%)
Query: 57 GCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRH 104
RVL CG D L +G+ V + S+ ++ ER + H
Sbjct: 22 PGARVLVPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPH 69
>2YXL-A nrPDB
Length = 450
Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 47/142 (33%), Gaps = 26/142 (18%)
Query: 52 LLRQHGCQRVLDVACGTGVDSIMLVE--------EGFSVTSVDASDKMLKYALKERWNRR 103
+L + V+D+A G + L E F V DKM LK+ R
Sbjct: 254 VLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDV------DKMRMKRLKDFVKRM 307
Query: 104 HEPAFDKWVIE-EANWMTLDKDVPQSAEGGFDAVICLGNSFAHLP--------DCKGDQS 154
V + + ++V DA + P D + S
Sbjct: 308 GIKIVKPLVKDARKAPEIIGEEVADKVL--LDAPCTSSGTIGKNPELRWRLREDKINEMS 365
Query: 155 EH-RLALKNIASMVRAGGLLVI 175
+ R L++ A +V+ GG L+
Sbjct: 366 QLQRELLESAARLVKPGGRLLY 387
>5E9J-A nrPDB
Length = 274
Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 19/142 (13%)
Query: 46 KAWLLGLLRQHGCQR------VLDVACGTGVDSIML----VEEGFSVTSVDASDKMLKYA 95
K+ L+G + Q+ VLD+ CG G D + + + D S K +
Sbjct: 14 KSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQR 73
Query: 96 LKERWNRRHEPAF---DKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGD 152
++ NRR + + + + +DK + + FD IC H +
Sbjct: 74 YEDMKNRRDSEYIFSAEFITADSSKELLIDK--FRDPQMCFD--ICSCQFVCHYSFESYE 129
Query: 153 QSEHRLALKNIASMVRAGGLLV 174
Q++ L+N + GG +
Sbjct: 130 QADM--MLRNACERLSPGGYFI 149
>3BGV-A nrPDB
Length = 313
Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 19/142 (13%)
Query: 46 KAWLLGLLRQHGCQR------VLDVACGTGVDSIML----VEEGFSVTSVDASDKMLKYA 95
K+ L+G + Q+ VLD+ CG G D + + + D S K +
Sbjct: 17 KSVLIGEFLEKVRQKKKRDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQR 76
Query: 96 LKERWNRRHEPAF---DKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGD 152
++ NRR + + + + +DK + + FD IC H +
Sbjct: 77 YEDMKNRRDSEYIFSAEFITADSSKELLIDK--FRDPQMCFD--ICSCQFVCHYSFESYE 132
Query: 153 QSEHRLALKNIASMVRAGGLLV 174
Q++ L+N + GG +
Sbjct: 133 QADM--MLRNACERLSPGGYFI 152
>5FUB-A nrPDB
Length = 337
Score = 29.8 bits (65), Expect = 1.7, Method: Composition-based stats.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Query: 20 DQYADGEAARVWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIM--LVE 77
D+Y L + + RT Y+ +L + VLD+ CGTGV S+ L+
Sbjct: 7 DEYFGNYGTLRLHLEMLSDKPRTETYRQVILSNSAALREKVVLDLGCGTGVISLFCALLA 66
Query: 78 EGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMTL 121
+ V +V+AS M ++ + + E A +TL
Sbjct: 67 KPAGVYAVEAS-SMAEHTEELVKQNGCDGVVT-VFQERAENLTL 108
>1NW6-A nrPDB
Length = 319
Score = 29.4 bits (64), Expect = 1.8, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 26/57 (45%)
Query: 54 RQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDK 110
H VLD G+GV + + ++EG + DA+ +Y K+ + + DK
Sbjct: 239 LSHPGSTVLDFFAGSGVTARVAIQEGRNSICTDAAPVFKEYYQKQLTFLQDDGLIDK 295
>5XN8-A nrPDB
Length = 365
Score = 29.4 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 17/139 (12%)
Query: 49 LLGLLRQHGCQ--------RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKER- 99
L+ +L+QHGC+ + LD A G + V ++ S DA L E
Sbjct: 76 LIAILKQHGCRGVVGVGGGKTLDTAKAIGYYQKLPVVVIPTIASTDAPTSALSVIYTEAG 135
Query: 100 --------WNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKG 151
D +I +A L + + F+A C + +
Sbjct: 136 EFEEYLIYPKNPDMVVMDTAIIAKAPVRLLVSGMGDALSTWFEAKACYDARATSMAGGQS 195
Query: 152 DQSEHRLALKNIASMVRAG 170
++ LA +++ G
Sbjct: 196 TEAALSLARLCYDTLLAEG 214
>1DUS-A nrPDB
Length = 194
Score = 29.4 bits (64), Expect = 2.0, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWV 112
+LD+ CG GV I L +E S T D + + +K A + + + V
Sbjct: 56 ILDLGCGYGVIGIALADEVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVV 107
>1DL5-A nrPDB
Length = 317
Score = 29.4 bits (64), Expect = 2.1, Method: Composition-based stats.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
Query: 36 GDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLV----EEGFSVTSVDASDKM 91
T S+ + ++ + G RVL++ GTG ++ ++ E+G V SV+ S K+
Sbjct: 55 YSTSSQPSLMALFMEWVGLDKGM-RVLEIGGGTGYNAAVMSRVVGEKGL-VVSVEYSRKI 112
Query: 92 LKYALKERW 100
+ A +
Sbjct: 113 CEIAKRNVE 121
>3M6U-A nrPDB
Length = 464
Score = 29.4 bits (64), Expect = 2.2, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 20/138 (14%)
Query: 52 LLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKW 111
LL +RVLD+A G + L + +L + + R ++W
Sbjct: 96 LLDPKPGERVLDLAAAPGGKTTHLAAR------MGGKGLLLANEVDGKRVRGLLENVERW 149
Query: 112 VIEEANWMTLDKDVPQSAEGGFDAVI----CLGNSF---------AHLPDCKGDQSEHRL 158
A + + ++ F V+ C G P +E +
Sbjct: 150 GAPLAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQK 209
Query: 159 A-LKNIASMVRAGGLLVI 175
A L + ++ GG+LV
Sbjct: 210 ALLAQASRLLGPGGVLVY 227
>2H1R-A nrPDB
Length = 299
Score = 29.0 bits (63), Expect = 2.4, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALK 97
VL++ CGTG ++ L+ V ++D +M+ K
Sbjct: 46 VLEIGCGTGNLTVKLLPLAKKVITIDIDSRMISEVKK 82
>3NJR-A nrPDB
Length = 204
Score = 29.0 bits (63), Expect = 2.5, Method: Composition-based stats.
Identities = 16/99 (16%), Positives = 34/99 (34%), Gaps = 1/99 (1%)
Query: 34 YIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLK 93
+ D + + +A L L + + D+ G+G S+ G +++ ++
Sbjct: 32 FAHDGQITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAGGRAITIEPRADRIE 91
Query: 94 YALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSAEGG 132
K P + V A D +P++ G
Sbjct: 92 NIQKNIDTYGLSPR-MRAVQGTAPAALADLPLPEAVFIG 129
>2H11-A nrPDB
Length = 232
Score = 29.0 bits (63), Expect = 2.6, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 9/112 (8%)
Query: 53 LRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWV 112
L+ RV CG V+ + G SV V+ S+ ++ E+ E +
Sbjct: 44 LKGKSGLRVFFPLCGKAVEMKWFADRGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIP 103
Query: 113 IEE---------ANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSE 155
+ + + D+P++ G FD + G A P + ++
Sbjct: 104 GTKVFKSSSGNISLYCCSIFDLPRTNIGKFDMIWDRGALVAINPGDRKCYAD 155
>2YVL-A nrPDB
Length = 248
Score = 29.0 bits (63), Expect = 2.7, Method: Composition-based stats.
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 8/87 (9%)
Query: 41 RTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERW 100
+ + Y A L L ++ +RVL+ G+G +L E V + +A ++ K A K
Sbjct: 78 KDSFYIALKLNLNKE---KRVLEFGTGSGALLAVLSEVAGEVWTFEAVEEFYKTAQKNLK 134
Query: 101 NRRHEPAFDKWVIEEANWMTLDKDVPQ 127
+ N D +VP+
Sbjct: 135 KFNLGKNVKFF-----NVDFKDAEVPE 156
>3X0D-A nrPDB
Length = 655
Score = 28.6 bits (62), Expect = 2.9, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 27/78 (34%), Gaps = 6/78 (7%)
Query: 61 VLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEANWMT 120
VLD+ GTG+ S+M EG + L+ RH + W +
Sbjct: 76 VLDIGTGTGLLSLMAAREGADKVTA------LEVFKPMGDCARHITSNSPWSDKITVISE 129
Query: 121 LDKDVPQSAEGGFDAVIC 138
DV Q D ++
Sbjct: 130 RSTDVSQIGGSRADIIVA 147
>1FP2-A nrPDB
Length = 352
Score = 28.6 bits (62), Expect = 3.0, Method: Composition-based stats.
Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 13/116 (11%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEE 115
G + ++DV GTG + ++ E + + + L N + I
Sbjct: 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPN 246
Query: 116 ANWM--------TLDKDVPQSAEGGFDAVICLGN-----SFAHLPDCKGDQSEHRL 158
A+ + DKD + + +AV G + D K D+++
Sbjct: 247 ADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQ 302
>6OGN-A nrPDB
Length = 692
Score = 28.6 bits (62), Expect = 3.3, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 53 LRQHGCQR-VLDVACGTGVDSIMLVEEGFSVT-SVDASDKMLKYALKERWNRRHEPAFDK 110
++ G + VLD+ GTG+ S+M V G +++ M + A+K
Sbjct: 59 VKDRGQKALVLDIGTGTGLLSMMAVTAGADFCYAIEVFKPMAEAAVKIVERNGFSDKIKV 118
Query: 111 WVIEEANWMT-LDKDVP 126
D D+P
Sbjct: 119 INKHSTEVTVGPDGDLP 135
>1WF3-A nrPDB
Length = 301
Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 33 LYIGDTRSRTAEYKAWLLGLLRQHGCQRV 61
Y D + W+ +LR+ +R+
Sbjct: 177 FYPEDYAKSDQTFGEWVAEILREEAMKRL 205
>2PWY-A nrPDB
Length = 258
Score = 28.2 bits (61), Expect = 4.3, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 55/154 (35%), Gaps = 16/154 (10%)
Query: 32 QLYIGDTRSRTAEYK---AWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVD-- 86
+ + RS T Y + ++ LL RVL+ G+G ++ L V+
Sbjct: 68 EYLLHMKRSATPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESY 127
Query: 87 -------ASDKMLKYALKERWNRR-HEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVIC 138
A + A + N R H ++ +EEA + + D+ + + A +
Sbjct: 128 EARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALDLMEPWKVLEKAALA 187
Query: 139 LGNS---FAHLPDCKGDQSEHRLALKNIASMVRA 169
L A+LP+ R A + + R
Sbjct: 188 LKPDRFLVAYLPNITQVLELVRAAEAHPFRLERV 221
>6IWT-A nrPDB
Length = 364
Score = 28.2 bits (61), Expect = 4.6, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 24/65 (36%)
Query: 57 GCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEEA 116
G + V+DV GTG M++ + ++ ++ + H + E
Sbjct: 201 GLKTVVDVGGGTGATLNMIISKYPNIKGINFDLPHVVEDAPSYPGVEHVGGDMFVSVPEG 260
Query: 117 NWMTL 121
+ + +
Sbjct: 261 DAIFM 265
>2QYO-A nrPDB
Length = 357
Score = 28.2 bits (61), Expect = 4.7, Method: Composition-based stats.
Identities = 12/72 (16%), Positives = 25/72 (34%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEE 115
G + ++DV G G ++ E +T V + L N + + +
Sbjct: 192 EGLESIVDVGGGNGTTGKIICETFPKLTCVVFDRPKVVENLCGSNNLTYVGGDMFISVPK 251
Query: 116 ANWMTLDKDVPQ 127
A+ + L +
Sbjct: 252 ADAVLLKAVLHD 263
>3BGI-A nrPDB
Length = 260
Score = 27.9 bits (60), Expect = 5.0, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 47/138 (34%), Gaps = 15/138 (10%)
Query: 53 LRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDAS---------DKMLKYALKERWNRR 103
L+ RV CG ++ + G +V V+ S ++ L Y +
Sbjct: 72 LKGQSGLRVFFPLCGKAIEMKWFADRGHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIA 131
Query: 104 HEPAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNI 163
F + + D+P++ G FD + G A P +H I
Sbjct: 132 GAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINP------GDHDRYADII 185
Query: 164 ASMVRAGGLLVIDHRNYD 181
S++R ++ +YD
Sbjct: 186 LSLLRKEFQYLVAVLSYD 203
>5XOH-A nrPDB
Length = 359
Score = 27.9 bits (60), Expect = 5.1, Method: Composition-based stats.
Identities = 6/31 (19%), Positives = 17/31 (54%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEGFSVTSVD 86
G + ++DV G+G M++ + ++ ++
Sbjct: 194 EGLKSIVDVGGGSGATLNMIISKYPTIKGIN 224
>1KYW-A nrPDB
Length = 365
Score = 27.9 bits (60), Expect = 5.4, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 64/203 (31%), Gaps = 41/203 (20%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRHEPAFDKWVIEE 115
G + ++DV GTG +V + ++ ++ + H I +
Sbjct: 199 EGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYPGVEHVGGDMFVSIPK 258
Query: 116 ANWMTLDKDVPQSAEGGFDAVICLGNSFAHLPDCKGDQSEHRLALKNIASMVRAGGLLVI 175
A+ + + ++ CL LKN + G +++
Sbjct: 259 ADAVFMKWICHDWSDEH-----CL------------------KFLKNCYEALPDNGKVIV 295
Query: 176 DHRNYDHILSTGCAPPGKNIYYKSDLTKDVTTSVLIVNNKAHMVTLDYTVQVPGAGQDGS 235
+ IL P ++ K + DV +++ +N + G
Sbjct: 296 ----AECILP---VAPDSSLATKGVVHIDV---IMLAHNPGGKERTQKEFEDLAKGA--- 342
Query: 236 PGLSKFRLSYYPHCLASFTELLQ 258
G F++ HC A T +++
Sbjct: 343 -GFQGFKV----HCNAFNTYIME 360
>4EVI-A nrPDB
Length = 388
Score = 27.9 bits (60), Expect = 5.9, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 56 HGCQRVLDVACGTGVDSIMLVEEGFSV 82
G ++DV GTG S ++ E ++
Sbjct: 219 EGLSSLVDVGGGTGNTSKVIAETFPNI 245
>2BGN-E nrPDB
Length = 363
Score = 27.5 bits (59), Expect = 6.5, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 132 GFDAVICLGNSFA----HLPDCKGDQSEHRLALKNIASMVRAGGLLVIDHRNYDHILSTG 187
G D + L + A ++P G + + M G++ ++ R H+L+
Sbjct: 51 GMDKPLTLPDFLAKFDYYMPAIAGCRDAIKRIAYEFVEMKAKDGVVYVEVRYSPHLLANS 110
Query: 188 CAPPGKNIYYKSDLTKDVTTSVLIVNNKAH 217
P + DLT D S++ +
Sbjct: 111 KVEPIPWNQAEGDLTPDEVVSLVNQGLQEG 140
>3TTS-A nrPDB
Length = 675
Score = 27.5 bits (59), Expect = 7.5, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Query: 30 VWQLYIGDTRSRTAEYKAWLLGLLRQHGCQRVLDVACGTGVDSIMLVEEGFSVTSVDASD 89
W D S + ++ L + L +A TG + ++ V VD
Sbjct: 46 SWAKIQRDEVSYDFTWLDDIIERLTKENIY--LCLATSTGAHPAWMAKKYPDVLRVDYEG 103
Query: 90 KMLKYALKERWNRRHEPAFDKWVIEEANWMTLDKDVPQSA 129
+ K+ + I KD PQ
Sbjct: 104 RKRKFGGRHNSCPNSPTYRKYAKILAGKLAERYKDHPQIV 143
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.311 0.122 0.318
Lambda K H
0.267 0.0372 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,839,394
Number of Sequences: 36641
Number of extensions: 398142
Number of successful extensions: 1344
Number of sequences better than 10.0: 135
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 1198
Number of HSP's gapped (non-prelim): 190
length of query: 295
length of database: 10,336,785
effective HSP length: 96
effective length of query: 199
effective length of database: 6,819,249
effective search space: 1357030551
effective search space used: 1357030551
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 58 (27.1 bits)