BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q14397 (625 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4PX2-A nrPDB 1288 0.0 4LC9-A nrPDB 1134 0.0 3W0L-B nrPDB 785 0.0 4LZJ-A nrPDB 62 5e-10 4S12-A nrPDB 54 2e-07 3ZSC-A nrPDB 33 0.40 4TWL-A nrPDB 32 0.63 3Q6J-A nrPDB 30 3.0 5OPT-L nrPDB 30 3.5 3FXA-A nrPDB 30 4.0 >4PX2-A nrPDB Length = 638 Score = 1288 bits (3332), Expect = 0.0, Method: Compositional matrix adjust. Identities = 625/625 (100%), Positives = 625/625 (100%) Query: 1 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 60 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI Sbjct: 13 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 72 Query: 61 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 73 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 132 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV Sbjct: 133 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 192 Query: 181 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ Sbjct: 193 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 252 Query: 241 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 300 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE Sbjct: 253 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 312 Query: 301 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 360 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV Sbjct: 313 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 372 Query: 361 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ Sbjct: 373 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 432 Query: 421 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 480 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL Sbjct: 433 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 492 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR Sbjct: 493 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 552 Query: 541 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 600 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA Sbjct: 553 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 612 Query: 601 VRSALAGPGQKRTADPLEILEPDVQ 625 VRSALAGPGQKRTADPLEILEPDVQ Sbjct: 613 VRSALAGPGQKRTADPLEILEPDVQ 637 >4LC9-A nrPDB Length = 636 Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/618 (89%), Positives = 588/618 (95%) Query: 1 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 60 MPGTKR+QHVIETPEPG+WELSGYEAAVPITEKSNPLT++LDKADAE IV+LLGQCDAEI Sbjct: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 Query: 61 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQ + TYQRLYSES+LTTM+QVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASRE TEDSALHGIEELKKVAAGKKRV+VIGISV Sbjct: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 Query: 181 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMD CM+NTAVFLPVLVGFNPVSMARNDPIEDW STFRQVAERMQKMQEKQ Sbjct: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 Query: 241 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 300 +AFVLNPAIGPEGLSGSSRMKGG ATKILLETLLLAAHKTVDQG+ +SQRCLLEILRTFE Sbjct: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 Query: 301 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 360 RAHQVTYSQS KIATLMK V SLEKKG V+LVGWQTLGIIAIMDGVECIHTFGADF+D+ Sbjct: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 Query: 361 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQK ELTNQGPQFTFSQ+DFLTSILPSLTE DTVVFIFTLDDNLTEVQ Sbjct: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 Query: 421 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 480 + E+V+EK +IQAL HSTVGQ+LP PLKKLFPS+ISITWPLLFF+YEG ++QKFQREL Sbjct: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRI+NSKLFWRALAMLQRFSGQSKARCIESLL+ Sbjct: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 Query: 541 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 600 AIHFPQPLSDD+RAAPISCHVQVAHEKE+VIP ALLSLL RCSI+EA+A L+AA SVCE Sbjct: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 Query: 601 VRSALAGPGQKRTADPLE 618 VRSAL+GPGQKR+ LE Sbjct: 601 VRSALSGPGQKRSTQALE 618 >3W0L-B nrPDB Length = 619 Score = 785 bits (2028), Expect = 0.0, Method: Compositional matrix adjust. Identities = 364/618 (58%), Positives = 490/618 (79%), Gaps = 1/618 (0%) Query: 1 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 60 M GT+++QHVIETP+PGKWEL+GYE ++PI+EKSNP+T++LDKAD +V+LL CDAEI Sbjct: 1 MRGTRKYQHVIETPDPGKWELAGYEESLPISEKSNPMTRELDKADPSQLVQLLRDCDAEI 60 Query: 61 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEE + L Y RLYSES+L TM VA +VQEVLK PD LVVLSG GTSGR+A L++ S Sbjct: 61 FQEEDENLIHYHRLYSESVLKTMGDVAKRVQEVLKNPDDSLVVLSGCGTSGRLALLLANS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 180 FN L+KGL + P Y Y+++GGDRS+V S+E +ED+ G +EL+KV GKK V+ IGIS Sbjct: 121 FNGLLKGLHKTPCYCYIMSGGDRSIVTSQESSEDNPQLGAQELEKVCEGKKNVLFIGISC 180 Query: 181 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 240 GLSAPF+AGQ+D CM + V+LPVLVGFNPVSMARN+ IE W S+FRQVAER+Q + + Q Sbjct: 181 GLSAPFIAGQLDFCMRHLDVYLPVLVGFNPVSMARNERIEGWHSSFRQVAERLQTLHDSQ 240 Query: 241 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 300 K F+LNPA+GPEG+SGSSRMKGGSATKILLETLLL AHK + + +++CLLEILRT+E Sbjct: 241 KGFILNPAVGPEGVSGSSRMKGGSATKILLETLLLVAHK-AESNVPVTEKCLLEILRTYE 299 Query: 301 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 360 RAH+VTYSQS KIA LMK +TSL+KKGH+Y++GW TLG++ IMD VEC+ T+ AD+RDV Sbjct: 300 RAHKVTYSQSKKIAALMKQTATSLQKKGHLYILGWGTLGLVGIMDAVECVPTYQADWRDV 359 Query: 361 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 420 RGF+ G + + N++ +L++ GPQF+ S EDF+ ++LPS++E DTV+ IFTLDD+L +++ Sbjct: 360 RGFITGGYHSIENKEGDLSSLGPQFSISHEDFVKNVLPSVSETDTVLLIFTLDDDLNQIE 419 Query: 421 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 480 +V VKEKT++IQ + H+T GQ LP LKK PSII +TWP+LF EYEG FIQKFQREL Sbjct: 420 KLVALVKEKTSNIQVICHATAGQYLPNSLKKTIPSIIGLTWPILFLEYEGAFIQKFQREL 479 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 540 STKW+L+TV++GA+ L GKI +N M+D +I+NSKLF RA ++LQR +GQS+ RC E LL+ Sbjct: 480 STKWILDTVTSGAYTLRGKIFRNFMVDFKINNSKLFHRATSVLQRLTGQSQQRCTEVLLQ 539 Query: 541 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 600 +I+ Q LS+ IR I+ HV+ A +++V+P+A++SLL C+I ++++ + ++ S+ A Sbjct: 540 SIYGEQTLSEQIRNTTIAGHVEAAASQDKVLPVAIVSLLRSCTIQDSRSRINSSLSIRSA 599 Query: 601 VRSALAGPGQKRTADPLE 618 + S++ PG+KR A+ E Sbjct: 600 IESSMNVPGRKRGAEDSE 617 >4LZJ-A nrPDB Length = 303 Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 60/257 (23%) Query: 30 ITEKSNPLTQDLDKADAENIVRLLGQCDAEIFQEEGQALSTYQRLYSESILTTMVQVAGK 89 ITE+ NP + D+D+ IVRL+ + D +L +I + + Q++ Sbjct: 13 ITEQRNPNSVDIDRQSTLEIVRLMNEED---------------KLVPLAIESCLPQISLA 57 Query: 90 VQEVLKE-PDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAG 140 V+++++ GG ++ G GTSGR+ L VS +++KG+ IAG Sbjct: 58 VEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVS-TEMVKGI---------IAG 107 Query: 141 GDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISVGLSAPFVAGQMDCCMNNTAV 200 G+ ++ EG ED+ + +L+ + K V+V GI+ P+V + + A Sbjct: 108 GECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLV-GIAASGRTPYVIAGLQYAKSLGA- 165 Query: 201 FLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQKAFVLNPAIGPEGLSGSSRM 260 L + + NP S ++A+ + +GPE L+GSSR+ Sbjct: 166 -LTISIASNP------------KSEMAEIAD-----------IAIETIVGPEILTGSSRL 201 Query: 261 KGGSATKILLETLLLAA 277 K G+A K++L L A+ Sbjct: 202 KSGTAQKMVLNMLTTAS 218 Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 62/262 (23%), Positives = 112/262 (42%), Gaps = 38/262 (14%) Query: 293 LEILRTFERAHQVT----YSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVE 348 LEI+R ++ S P+I+ ++ + + ++ G + +G T G + ++D E Sbjct: 30 LEIVRLMNEEDKLVPLAIESCLPQISLAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASE 89 Query: 349 CIHTFGADFRDVRGFLIGDHSDMF--------NQKAELTNQGPQFTFSQEDFLTSILPSL 400 C TFG V+G + G + N KA L N FS+ D L I S Sbjct: 90 CPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNTKAVL-NDLQSIHFSKNDVLVGIAAS- 147 Query: 401 TEIDTVVFIFTLDDNLTEVQ-TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISI 459 V+ +L + +I K + I +A T+ + P I++ Sbjct: 148 GRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIETI----------VGPEILTG 197 Query: 460 TWPLLFFEYEGNFIQKFQRELSTKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRA 519 + + + + K VLN ++T + +LLGK +N M+D++ SN KL RA Sbjct: 198 S-------------SRLKSGTAQKMVLNMLTTASMILLGKCYENLMVDVQASNEKLKARA 244 Query: 520 LAMLQRFSGQSKARCIESLLRA 541 + ++ + + +K ++LL A Sbjct: 245 VRIVMQATDCNKTLAEQTLLEA 266 >4S12-A nrPDB Length = 298 Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 68/260 (26%), Positives = 110/260 (42%), Gaps = 74/260 (28%) Query: 30 ITEKSNPLTQDLDK-ADAENIVRLLGQCDAEIFQEEGQALSTYQRLYSESILTTMVQVAG 88 I+E NP T DLD + E + R+ +E + + RL ++ + Q Sbjct: 10 ISESRNPDTMDLDTLSTLEMLTRI---------NDEDRKVPEAIRL----VIPNIAQAVD 56 Query: 89 KVQEVLKEPDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAG 140 + L+ DGG ++ G GTSGR+ L V +++ LIAG Sbjct: 57 LAAKALR--DGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIG----------LIAG 104 Query: 141 GDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISVGLSAPFVAG------QMDCC 194 G +++ + EG ED G +L+ + +V+G++ P+V G Q+ C Sbjct: 105 GPGALLKAVEGAEDDVSLGERDLRDLQLTATD-MVVGLAASGRTPYVIGALRFARQLGC- 162 Query: 195 MNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQKAFV-LNPAIGPEG 253 TA + NP + PI Q+A V ++P +GPE Sbjct: 163 --PTAA-----ISCNP-----DSPI-------------------AQEALVAISPVVGPEA 191 Query: 254 LSGSSRMKGGSATKILLETL 273 L+GS+RMK G+A K++L L Sbjct: 192 LTGSTRMKSGTAQKLVLNML 211 Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 57/226 (25%), Positives = 96/226 (42%), Gaps = 26/226 (11%) Query: 311 PKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDVRGFLIGDHSD 370 P IA + + +L G + +G T G + ++D EC TFG V G + G Sbjct: 49 PNIAQAVDLAAKALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGA 108 Query: 371 MFN--QKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQTI--VEQV 426 + + AE + + D LT D VV + + + Q+ Sbjct: 109 LLKAVEGAE-----DDVSLGERDLRDL---QLTATDMVVGLAASGRTPYVIGALRFARQL 160 Query: 427 KEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFE-YEGNFIQKFQRELSTKWV 485 T I S + Q ++++I+ P++ E G+ + + + K V Sbjct: 161 GCPTAAISCNPDSPIAQE----------ALVAIS-PVVGPEALTGS--TRMKSGTAQKLV 207 Query: 486 LNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSK 531 LN +STGA V LGK+ QN M+D++ +N KL RA ++ +G S+ Sbjct: 208 LNMLSTGAMVKLGKVYQNLMVDVKATNVKLVDRACRIVVEATGASR 253 >3ZSC-A nrPDB Length = 340 Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust. Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Query: 21 LSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEIFQEEGQALS-TYQRLYSESI 79 ++G + AV I + SN +T +K + V L+G D E ++ GQA TY Y +++ Sbjct: 135 VNGNDGAVDIKKYSNYITVSWNKFVDHDKVSLVGSSDKEDPEQAGQAYKVTYHHNYFKNL 194 Query: 80 LTTMVQV 86 + M ++ Sbjct: 195 IQRMPRI 201 >4TWL-A nrPDB Length = 246 Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust. Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 10/89 (11%) Query: 497 LGKILQNHM-LDLRISNSKLFWRALAMLQRFSGQSKARCI---ESLLRAIHFPQPLSDDI 552 LGK+ +N+ +D R+ NS +L F G + + I E L+ IHF P ++ Sbjct: 50 LGKLRRNYRAVDARLRNS-----GHDVLVDFKGNAGSLSINRVEYQLKRIHFHSPSEHEM 104 Query: 553 RAAPISCHVQVAHEKEQVIPIALLSLLFR 581 Q+ HE Q A++S+LFR Sbjct: 105 NGERFDLEAQLVHES-QDQKRAVVSILFR 132 >3Q6J-A nrPDB Length = 523 Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 16/60 (26%) Query: 82 TMVQVAGKVQEVLKEPDGGLVVLS--------------GGGTSGRM--AFLMSVSFNQLM 125 T+ Q A ++ E+L+ PDGG V+ + GGG +GR A+L ++ QL+ Sbjct: 12 TINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLI 71 >5OPT-L nrPDB Length = 273 Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust. Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 10/118 (8%) Query: 7 FQHVIETPEPGK-----WELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEIF 61 F V+E P G +++ G A V + E ++ EN+ G+ + Sbjct: 83 FMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEG----NIKLLKVENVYTSTGRIPVAMT 138 Query: 62 QEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSV 119 + + R + L ++ KV +++K +G +V+++GG GR+ +MS+ Sbjct: 139 HDGHRIRYPDPRTHRGDTLVYNLK-EKKVVDLIKSSNGKVVMVTGGANRGRIGEIMSI 195 >3FXA-A nrPDB Length = 201 Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%) Query: 59 EIFQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMS 118 + +QEE A+S + SE L V+ K+ E G +V++G GTSG A + Sbjct: 13 QTWQEEANAISRLPEVTSEEALVKTVE---KIAECT-----GKIVVAGCGTSGVAAKKLV 64 Query: 119 VSFN 122 SFN Sbjct: 65 HSFN 68 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4PX2-A nrPDB 1025 0.0 4LC9-A nrPDB 973 0.0 3W0L-B nrPDB 950 0.0 4LZJ-A nrPDB 259 2e-69 4S12-A nrPDB 234 1e-61 Sequences not found previously or not previously below threshold: 3TRJ-A nrPDB 39 0.008 1TK9-A nrPDB 34 0.19 3Q6J-A nrPDB 34 0.19 1BW0-A nrPDB 34 0.21 4UM3-P nrPDB 33 0.38 6OIK-A nrPDB 32 0.65 3TKA-A nrPDB 32 0.66 5JWC-A nrPDB 31 2.0 2JSY-A nrPDB 30 2.5 5I2H-A nrPDB 30 3.1 CONVERGED! >4PX2-A nrPDB Length = 638 Score = 1025 bits (2649), Expect = 0.0, Method: Composition-based stats. Identities = 625/625 (100%), Positives = 625/625 (100%) Query: 1 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 60 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI Sbjct: 13 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 72 Query: 61 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 73 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 132 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV Sbjct: 133 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 192 Query: 181 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ Sbjct: 193 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 252 Query: 241 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 300 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE Sbjct: 253 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 312 Query: 301 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 360 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV Sbjct: 313 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 372 Query: 361 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ Sbjct: 373 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 432 Query: 421 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 480 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL Sbjct: 433 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 492 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR Sbjct: 493 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 552 Query: 541 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 600 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA Sbjct: 553 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 612 Query: 601 VRSALAGPGQKRTADPLEILEPDVQ 625 VRSALAGPGQKRTADPLEILEPDVQ Sbjct: 613 VRSALAGPGQKRTADPLEILEPDVQ 637 >4LC9-A nrPDB Length = 636 Score = 973 bits (2516), Expect = 0.0, Method: Composition-based stats. Identities = 553/618 (89%), Positives = 588/618 (95%) Query: 1 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 60 MPGTKR+QHVIETPEPG+WELSGYEAAVPITEKSNPLT++LDKADAE IV+LLGQCDAEI Sbjct: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 Query: 61 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQ + TYQRLYSES+LTTM+QVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASRE TEDSALHGIEELKKVAAGKKRV+VIGISV Sbjct: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 Query: 181 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMD CM+NTAVFLPVLVGFNPVSMARNDPIEDW STFRQVAERMQKMQEKQ Sbjct: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 Query: 241 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 300 +AFVLNPAIGPEGLSGSSRMKGG ATKILLETLLLAAHKTVDQG+ +SQRCLLEILRTFE Sbjct: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 Query: 301 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 360 RAHQVTYSQS KIATLMK V SLEKKG V+LVGWQTLGIIAIMDGVECIHTFGADF+D+ Sbjct: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 Query: 361 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQK ELTNQGPQFTFSQ+DFLTSILPSLTE DTVVFIFTLDDNLTEVQ Sbjct: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 Query: 421 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 480 + E+V+EK +IQAL HSTVGQ+LP PLKKLFPS+ISITWPLLFF+YEG ++QKFQREL Sbjct: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRI+NSKLFWRALAMLQRFSGQSKARCIESLL+ Sbjct: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 Query: 541 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 600 AIHFPQPLSDD+RAAPISCHVQVAHEKE+VIP ALLSLL RCSI+EA+A L+AA SVCE Sbjct: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 Query: 601 VRSALAGPGQKRTADPLE 618 VRSAL+GPGQKR+ LE Sbjct: 601 VRSALSGPGQKRSTQALE 618 >3W0L-B nrPDB Length = 619 Score = 950 bits (2456), Expect = 0.0, Method: Composition-based stats. Identities = 364/618 (58%), Positives = 490/618 (79%), Gaps = 1/618 (0%) Query: 1 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 60 M GT+++QHVIETP+PGKWEL+GYE ++PI+EKSNP+T++LDKAD +V+LL CDAEI Sbjct: 1 MRGTRKYQHVIETPDPGKWELAGYEESLPISEKSNPMTRELDKADPSQLVQLLRDCDAEI 60 Query: 61 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEE + L Y RLYSES+L TM VA +VQEVLK PD LVVLSG GTSGR+A L++ S Sbjct: 61 FQEEDENLIHYHRLYSESVLKTMGDVAKRVQEVLKNPDDSLVVLSGCGTSGRLALLLANS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 180 FN L+KGL + P Y Y+++GGDRS+V S+E +ED+ G +EL+KV GKK V+ IGIS Sbjct: 121 FNGLLKGLHKTPCYCYIMSGGDRSIVTSQESSEDNPQLGAQELEKVCEGKKNVLFIGISC 180 Query: 181 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 240 GLSAPF+AGQ+D CM + V+LPVLVGFNPVSMARN+ IE W S+FRQVAER+Q + + Q Sbjct: 181 GLSAPFIAGQLDFCMRHLDVYLPVLVGFNPVSMARNERIEGWHSSFRQVAERLQTLHDSQ 240 Query: 241 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 300 K F+LNPA+GPEG+SGSSRMKGGSATKILLETLLL AHK + + +++CLLEILRT+E Sbjct: 241 KGFILNPAVGPEGVSGSSRMKGGSATKILLETLLLVAHK-AESNVPVTEKCLLEILRTYE 299 Query: 301 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 360 RAH+VTYSQS KIA LMK +TSL+KKGH+Y++GW TLG++ IMD VEC+ T+ AD+RDV Sbjct: 300 RAHKVTYSQSKKIAALMKQTATSLQKKGHLYILGWGTLGLVGIMDAVECVPTYQADWRDV 359 Query: 361 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 420 RGF+ G + + N++ +L++ GPQF+ S EDF+ ++LPS++E DTV+ IFTLDD+L +++ Sbjct: 360 RGFITGGYHSIENKEGDLSSLGPQFSISHEDFVKNVLPSVSETDTVLLIFTLDDDLNQIE 419 Query: 421 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 480 +V VKEKT++IQ + H+T GQ LP LKK PSII +TWP+LF EYEG FIQKFQREL Sbjct: 420 KLVALVKEKTSNIQVICHATAGQYLPNSLKKTIPSIIGLTWPILFLEYEGAFIQKFQREL 479 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 540 STKW+L+TV++GA+ L GKI +N M+D +I+NSKLF RA ++LQR +GQS+ RC E LL+ Sbjct: 480 STKWILDTVTSGAYTLRGKIFRNFMVDFKINNSKLFHRATSVLQRLTGQSQQRCTEVLLQ 539 Query: 541 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 600 +I+ Q LS+ IR I+ HV+ A +++V+P+A++SLL C+I ++++ + ++ S+ A Sbjct: 540 SIYGEQTLSEQIRNTTIAGHVEAAASQDKVLPVAIVSLLRSCTIQDSRSRINSSLSIRSA 599 Query: 601 VRSALAGPGQKRTADPLE 618 + S++ PG+KR A+ E Sbjct: 600 IESSMNVPGRKRGAEDSE 617 >4LZJ-A nrPDB Length = 303 Score = 259 bits (662), Expect = 2e-69, Method: Composition-based stats. Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 39/288 (13%) Query: 268 ILLETL-LLAAHKTVDQGIAASQRCLLEILRTFERAHQVT----YSQSPKIATLMKSVST 322 I+L++L L + + ++ LEI+R ++ S P+I+ ++ + Sbjct: 4 IILKSLSTLITEQRNPNSVDIDRQSTLEIVRLMNEEDKLVPLAIESCLPQISLAVEQIVQ 63 Query: 323 SLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDVRGFLIGDHSDMF--------NQ 374 + ++ G + +G T G + ++D EC TFG V+G + G + N Sbjct: 64 AFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNT 123 Query: 375 KAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ-TIVEQVKEKTNHI 433 KA L N FS+ D L I S V+ +L + +I K + I Sbjct: 124 KAVL-NDLQSIHFSKNDVLVGIAAS-GRTPYVIAGLQYAKSLGALTISIASNPKSEMAEI 181 Query: 434 QALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQRELSTKWVLNTVSTGA 493 +A T+ + P I++ + + + + K VLN ++T + Sbjct: 182 ADIAIETI----------VGPEILTGS-------------SRLKSGTAQKMVLNMLTTAS 218 Query: 494 HVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLRA 541 +LLGK +N M+D++ SN KL RA+ ++ + + +K ++LL A Sbjct: 219 MILLGKCYENLMVDVQASNEKLKARAVRIVMQATDCNKTLAEQTLLEA 266 Score = 210 bits (533), Expect = 2e-54, Method: Composition-based stats. Identities = 66/257 (25%), Positives = 116/257 (45%), Gaps = 60/257 (23%) Query: 30 ITEKSNPLTQDLDKADAENIVRLLGQCDAEIFQEEGQALSTYQRLYSESILTTMVQVAGK 89 ITE+ NP + D+D+ IVRL+ + D +L +I + + Q++ Sbjct: 13 ITEQRNPNSVDIDRQSTLEIVRLMNEED---------------KLVPLAIESCLPQISLA 57 Query: 90 VQEVLKE-PDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAG 140 V+++++ GG ++ G GTSGR+ L VS +++KG+ IAG Sbjct: 58 VEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVS-TEMVKGI---------IAG 107 Query: 141 GDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISVGLSAPFVAGQMDCCMNNTAV 200 G+ ++ EG ED+ + +L+ + K V+V GI+ P+V + + A Sbjct: 108 GECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLV-GIAASGRTPYVIAGLQYAKSLGA- 165 Query: 201 FLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQKAFVLNPAIGPEGLSGSSRM 260 L + + NP S ++A+ + +GPE L+GSSR+ Sbjct: 166 -LTISIASNP------------KSEMAEIAD-----------IAIETIVGPEILTGSSRL 201 Query: 261 KGGSATKILLETLLLAA 277 K G+A K++L L A+ Sbjct: 202 KSGTAQKMVLNMLTTAS 218 >4S12-A nrPDB Length = 298 Score = 234 bits (596), Expect = 1e-61, Method: Composition-based stats. Identities = 62/264 (23%), Positives = 106/264 (40%), Gaps = 30/264 (11%) Query: 293 LEILRTFERAHQVTYSQS----PKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVE 348 LE+L + P IA + + +L G + +G T G + ++D E Sbjct: 27 LEMLTRINDEDRKVPEAIRLVIPNIAQAVDLAAKALRDGGRLIYLGAGTSGRLGVLDASE 86 Query: 349 CIHTFGADFRDVRGFLIGDHSDMFN--QKAELTNQGPQFTFSQEDFLTSILPSLTEIDTV 406 C TFG V G + G + + AE + + D LT D V Sbjct: 87 CPPTFGVPHGRVIGLIAGGPGALLKAVEGAE-----DDVSLGERDLRDL---QLTATDMV 138 Query: 407 VFIFTLDDNLTEVQTI--VEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLL 464 V + + + Q+ T I S + Q ++++I+ P++ Sbjct: 139 VGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQE----------ALVAIS-PVV 187 Query: 465 FFE-YEGNFIQKFQRELSTKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAML 523 E G+ + + + K VLN +STGA V LGK+ QN M+D++ +N KL RA ++ Sbjct: 188 GPEALTGS--TRMKSGTAQKLVLNMLSTGAMVKLGKVYQNLMVDVKATNVKLVDRACRIV 245 Query: 524 QRFSGQSKARCIESLLRAIHFPQP 547 +G S+ +L + +P Sbjct: 246 VEATGASRVEAENALSQTEFEVKP 269 Score = 191 bits (485), Expect = 7e-49, Method: Composition-based stats. Identities = 65/258 (25%), Positives = 107/258 (41%), Gaps = 62/258 (24%) Query: 30 ITEKSNPLTQDLDK-ADAENIVRLLGQCDAEIFQEEGQALSTYQRLYSESILTTMVQVAG 88 I+E NP T DLD + E + R+ +E + + RL ++ + Q Sbjct: 10 ISESRNPDTMDLDTLSTLEMLTRI---------NDEDRKVPEAIRL----VIPNIAQAVD 56 Query: 89 KVQEVLKEPDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAG 140 + L+ DGG ++ G GTSGR+ L V +++ LIAG Sbjct: 57 LAAKALR--DGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIG----------LIAG 104 Query: 141 GDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISVGLSAPFVAGQMDCCMNNTAV 200 G +++ + EG ED G +L+ + +V+G++ P+V G + Sbjct: 105 GPGALLKAVEGAEDDVSLGERDLRDLQLTATD-MVVGLAASGRTPYVIGALRFARQLGCP 163 Query: 201 FLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQKAFV-LNPAIGPEGLSGSSR 259 + NP + PI Q+A V ++P +GPE L+GS+R Sbjct: 164 --TAAISCNP-----DSPI-------------------AQEALVAISPVVGPEALTGSTR 197 Query: 260 MKGGSATKILLETLLLAA 277 MK G+A K++L L A Sbjct: 198 MKSGTAQKLVLNMLSTGA 215 >3TRJ-A nrPDB Length = 201 Score = 38.6 bits (88), Expect = 0.008, Method: Composition-based stats. Identities = 27/124 (21%), Positives = 48/124 (38%), Gaps = 7/124 (5%) Query: 311 PKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDVRGFLIGDHSD 370 P IA K++ + LE G V + G + G+IA + ++ F + + Sbjct: 30 PAIAQAAKAMVSCLENGGKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAI------A 83 Query: 371 MFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQTIVEQVKEKT 430 + A +T G + FSQ F + E D ++ I T D+ + + E + Sbjct: 84 LTGDVATITAVGNHYGFSQI-FAKQVAALGNEDDILLVITTSGDSENILSAVEEAHDLEM 142 Query: 431 NHIQ 434 I Sbjct: 143 KVIA 146 >1TK9-A nrPDB Length = 188 Score = 34.0 bits (76), Expect = 0.19, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 57/162 (35%), Gaps = 14/162 (8%) Query: 292 LLEILRTFERAHQVTYSQSP----KIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGV 347 L+ ++ + HQ S +IA + + + L+K G + + G A Sbjct: 3 LINLVEKEWQEHQKIVQASEILKGQIAKVGELLCECLKKGGKILICGNGGSAADAQHFAA 62 Query: 348 ECIHTFGADFRDVRGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVV 407 E + + + + G + + L+ G + F + F + E D ++ Sbjct: 63 ELSGRYKKERKALAGI------ALTTDTSALSAIGNDYGF-EFVFSRQVEALGNEKDVLI 115 Query: 408 FIFTLDDNLTEVQTIVEQVKEKTNHIQALAHSTVGQTLPIPL 449 I T + ++ + K K ++ L S G + L Sbjct: 116 GISTSGKSPNVLEALK---KAKELNMLCLGLSGKGGGMMNKL 154 >3Q6J-A nrPDB Length = 523 Score = 34.0 bits (76), Expect = 0.19, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 19/76 (25%) Query: 82 TMVQVAGKVQEVLKEPDGGLVVL--------------SGGGTSGRMAFLMSVSFNQLMKG 127 T+ Q A ++ E+L+ PDGG V+ GGG +GR ++ + M G Sbjct: 12 TINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGR----FGSAYLRAMGG 67 Query: 128 LGQKPLYTYLIAGGDR 143 Q + + GG Sbjct: 68 -RQLIVDRWPFLGGSC 82 >1BW0-A nrPDB Length = 416 Score = 34.0 bits (76), Expect = 0.21, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 4/122 (3%) Query: 30 ITEKSNPLTQDLDKADAENIVRLLGQCDAEIFQEEGQALSTYQRLYSESILTTMVQVAGK 89 +T SNP + + E+IVRL + +F +E A ++ + T++ Sbjct: 183 VTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETT 242 Query: 90 VQEVLKEPDGGLVVLSGGGTSGRMAFLMSVSFNQLMKGLGQKPLYTYLIAGGDRSVVASR 149 V V+ +V+ G R+ +L+ V + + ++ G +VV + Sbjct: 243 VPRVILGGTAKNLVVPGW----RLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAA 298 Query: 150 EG 151 G Sbjct: 299 LG 300 >4UM3-P nrPDB Length = 228 Score = 33.2 bits (74), Expect = 0.38, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 38/83 (45%), Gaps = 2/83 (2%) Query: 248 AIGPEGLSGSS-RMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFERAHQVT 306 G + SG++ R+K GS T E + + D SQ EIL ++ + VT Sbjct: 143 VSGVDTESGATCRIKIGSWTHHSREISVDPTTENSDDSEYFSQYSRFEILDVTQKKNSVT 202 Query: 307 YSQSPKIATLMKSVSTSLEKKGH 329 YS P+ ++ VS + KKG Sbjct: 203 YSCCPEAYEDVE-VSLNFRKKGR 224 >6OIK-A nrPDB Length = 354 Score = 32.5 bits (72), Expect = 0.65, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 24/64 (37%) Query: 298 TFERAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADF 357 T + +S I +K S K + L+G G I+ ++ IH G Sbjct: 4 TLSAEDKAAVERSKMIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSG 63 Query: 358 RDVR 361 DV+ Sbjct: 64 EDVK 67 >3TKA-A nrPDB Length = 347 Score = 32.1 bits (71), Expect = 0.66, Method: Composition-based stats. Identities = 55/262 (20%), Positives = 96/262 (36%), Gaps = 36/262 (13%) Query: 104 LSGGGTSGRMAFLM---SVSFNQLMKGLGQKPLYTYLIA----GGDRSVVASREGTEDSA 156 ++GG GRM +V ++ + GL +P Y+ GG ++ S+ G E Sbjct: 26 MTGGQQMGRMMENYKHTTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRL 85 Query: 157 LHGIEELKKVAAGKK----RVIVIGISVGLSAPFV-----AGQMDCCMNNTAVFLPVLV- 206 L + + +A K R +I +V G++D + + V P L Sbjct: 86 LAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDD 145 Query: 207 GFNPVSMARNDPIEDWSSTFR--QVAERMQKMQEKQKAFVLNPAIGPE--------GLSG 256 S R+ P++ R AE +Q +E A+VL G E + Sbjct: 146 AERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKT-YGEERFAKRIARAIVE 204 Query: 257 SSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFERAHQVTYSQSPKIATL 316 +R + + TK L E + A + RTF+ S+ +I Sbjct: 205 RNREQPMTRTKELAEVVAAAT--------PVKDKFKHPATRTFQAVRIWVNSELEEIEQA 256 Query: 317 MKSVSTSLEKKGHVYLVGWQTL 338 +KS L G + ++ + +L Sbjct: 257 LKSSLNVLAPGGRLSIISFHSL 278 >5JWC-A nrPDB Length = 521 Score = 30.6 bits (67), Expect = 2.0, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 46/112 (41%), Gaps = 4/112 (3%) Query: 329 HVYLVGWQTLGIIAIMDGVECIHTFGADF-RDVRGFLIGDH---SDMFNQKAELTNQGPQ 384 + ++G + I AI D + + ++ L G+ + +++ELT PQ Sbjct: 326 KLRVIGIPSNNIYAIGDCKKIQPKLLHEHTNEIIKILTGNKLTSEALKLKQSELTKTFPQ 385 Query: 385 FTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQTIVEQVKEKTNHIQAL 436 + S+ D+ + +T ++F +D N + K++ ++ + Sbjct: 386 LSISKWDYEKNKKGEMTPQQFHDYLFEIDKNYKSPTPTAQNAKQEAYYLSNV 437 >2JSY-A nrPDB Length = 167 Score = 30.2 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 27/81 (33%), Gaps = 1/81 (1%) Query: 366 GDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQTIVEQ 425 G + Q+ ++ +Q P FT L + T++ + D + Sbjct: 8 GGPVTLVGQEVKVGDQAPDFTVLTNSLEEKSLADMKGKVTIISVIPSIDT-GVCDAQTRR 66 Query: 426 VKEKTNHIQALAHSTVGQTLP 446 E+ + + T+ LP Sbjct: 67 FNEEAAKLGDVNVYTISADLP 87 >5I2H-A nrPDB Length = 364 Score = 30.2 bits (66), Expect = 3.1, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 8/100 (8%) Query: 73 RLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVSFNQ---LMKGLG 129 R + S+ VA + +VL G ++ G+SGR L+ V+ M L Sbjct: 159 RFLTLSLAGRAWNVAPRFADVLPAGQPGKILKDNSGSSGR--VLLDVAGGSGIYTMAVLQ 216 Query: 130 QKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAG 169 + P + +I + + E E G+ + ++ AG Sbjct: 217 KYPTWRGIIFDRPEVLKIAAELAE---QTGVRDRLELHAG 253 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.307 0.122 0.300 Lambda K H 0.267 0.0368 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 18,865,241 Number of Sequences: 36641 Number of extensions: 648801 Number of successful extensions: 1945 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1901 Number of HSP's gapped (non-prelim): 34 length of query: 625 length of database: 10,336,785 effective HSP length: 103 effective length of query: 522 effective length of database: 6,562,762 effective search space: 3425761764 effective search space used: 3425761764 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.6 bits)