BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q14019 (142 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1T3Y-A nrPDB 290 2e-79 4LIZ-A nrPDB 47 2e-06 1X67-A nrPDB 38 0.002 6NIQ-A nrPDB 33 0.053 5Y1Z-A nrPDB 32 0.11 2KVK-A nrPDB 31 0.16 2LJ8-A nrPDB 31 0.17 4PXO-A nrPDB 29 0.87 6N2B-A nrPDB 28 1.2 5E43-A nrPDB 28 1.2 3BYD-A nrPDB 28 1.4 1HZO-A nrPDB 28 1.4 4C6Y-A nrPDB 27 2.9 5FQM-A nrPDB 27 3.7 6NJ1-A nrPDB 27 4.2 3BFD-A nrPDB 27 4.5 4WUA-A nrPDB 27 4.5 4FR4-A nrPDB 26 5.3 6B1P-A nrPDB 26 5.6 5KSC-A nrPDB 26 5.6 5C2I-A nrPDB 26 7.4 >1T3Y-A nrPDB Length = 141 Score = 290 bits (741), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 141/141 (100%), Positives = 141/141 (100%) Query: 2 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 61 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF Sbjct: 1 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 60 Query: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE 121 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE Sbjct: 61 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE 120 Query: 122 EDFIKSELKKAGGANYDAQTE 142 EDFIKSELKKAGGANYDAQTE Sbjct: 121 EDFIKSELKKAGGANYDAQTE 141 >4LIZ-A nrPDB Length = 142 Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%) Query: 52 CTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQ-RAKTGTDKTLVKEVVQNFAK 110 +D FA+ R +GD SKR KF I+W GE + + RA K VK V+ NF Sbjct: 55 LKEDALQFAYYRTISGDEESKRVKFVFISWAGEGIKKPKLRAVMSILKGDVKNVINNFHI 114 Query: 111 EFVISDRKELEEDFIKSELKKAGGANY 137 E + +L ED I +++K A++ Sbjct: 115 ELHATSLDDLVEDEIAAKIKLEHHAHH 141 >1X67-A nrPDB Length = 146 Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust. Identities = 26/97 (26%), Positives = 43/97 (44%), Gaps = 7/97 (7%) Query: 1 MATKIDK--EACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDD 55 MA + + A + AY V + S W F Y+G++ V G + +++ Sbjct: 8 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSG 67 Query: 56 VRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRA 92 ++AF R D S KF LI W GE V+ +++ Sbjct: 68 KVMYAFCRVK--DPNSGLPKFVLINWTGEGVNDVRKG 102 >6NIQ-A nrPDB Length = 267 Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 19/32 (59%) Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95 T GDA+S S+ LITW+ N +G R + G Sbjct: 170 LTLGDALSPASRAQLITWLKANTTGGTRLRAG 201 >5Y1Z-A nrPDB Length = 137 Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust. Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 13/102 (12%) Query: 12 AAYNLVRDDGSAVIWVTFKY-DGS----TIVPGEQGAE--YQHFIQQCTDDVRLFAFVRF 64 AAY V + SA W + Y DGS GE G + HF Q ++ F Sbjct: 17 AAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKV----MYGFC-- 70 Query: 65 TTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQ 106 + D+ + K+ LI W+GE+V ++ + V E Q Sbjct: 71 SVKDSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQ 112 >2KVK-A nrPDB Length = 144 Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust. Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 3/105 (2%) Query: 7 KEACRAAYNLVRDDGSAVIWVTFKYDGSTIVP---GEQGAEYQHFIQQCTDDVRLFAFVR 63 +E+ R A + +R S + + DG I GE+ Y ++ + + + Sbjct: 9 EESVRGAIDDLRMKKSRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFD 68 Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNF 108 F DA SKR K LI WI + ++ + + V + + Sbjct: 69 FEYNDAGSKREKLILIQWIPDTARPREKMMYSASRDALSSVSEGY 113 >2LJ8-A nrPDB Length = 144 Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 6/57 (10%) Query: 39 GEQGAEYQHFIQQCTDDVRLFAFVRF--TTGDAMSKRSKFALITWIGENVSGLQRAK 93 GE+GA + FI+ +V +A F TT D R K LI+W + SG R K Sbjct: 51 GERGANFDQFIEAIDKNVPCYAAFDFEYTTNDG--PRDKLILISWNPD--SGAPRTK 103 >4PXO-A nrPDB Length = 238 Score = 28.9 bits (63), Expect = 0.87, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 22/43 (51%) Query: 63 RFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVV 105 RF GDA+S + W+G + G+ A T K + +EV+ Sbjct: 177 RFCQGDAVSHADLCLISLWVGTGIFGIDTAAYPTVKRISEEVL 219 >6N2B-A nrPDB Length = 577 Score = 28.5 bits (62), Expect = 1.2, Method: Composition-based stats. Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 7/88 (7%) Query: 34 STIVPGEQGAE-YQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRA 92 ST GE E Y ++ Q +D R A+ + G K T+IG VS Sbjct: 4 STTYGGESLTEAYLYYFNQICEDAREAAYSYYFDGSGNFKS------TYIGGKVSPQNEP 57 Query: 93 KTGTDKTLVKEVVQNFAKEFVISDRKEL 120 K D + Q+ AK+ ++S +E+ Sbjct: 58 KRIWDDLTAGHITQDEAKDRILSGMREI 85 >5E43-A nrPDB Length = 297 Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust. Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKT 99 TTGDA+ R + L W+ N +G R + G KT Sbjct: 197 VTTGDALDARDRERLNAWLTANKTGDARIRAGLPKT 232 >3BYD-A nrPDB Length = 267 Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust. Identities = 10/33 (30%), Positives = 20/33 (60%) Query: 63 RFTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95 + T G+A+ ++ + L+TW+ N +G Q + G Sbjct: 171 KLTLGNALGEQQRAQLVTWLKGNTTGGQSIRAG 203 >1HZO-A nrPDB Length = 271 Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust. Identities = 12/35 (34%), Positives = 18/35 (51%) Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDK 98 T GDA+ + + L+TW+ N +G K G K Sbjct: 169 LTLGDALGQSQRQQLVTWLKGNTTGDNSIKAGLPK 203 >4C6Y-A nrPDB Length = 262 Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust. Identities = 11/33 (33%), Positives = 19/33 (57%) Query: 63 RFTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95 + GDA+S S+ L+ W+ N +G +R + G Sbjct: 166 KLLLGDALSPASREQLVDWLLANKTGDKRLRAG 198 >5FQM-A nrPDB Length = 269 Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust. Identities = 11/32 (34%), Positives = 18/32 (56%) Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95 GDA+S S+ L+ W+ N +G +R + G Sbjct: 168 LLLGDALSPASRQQLVDWLVANKTGDKRLRAG 199 >6NJ1-A nrPDB Length = 282 Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust. Identities = 11/38 (28%), Positives = 21/38 (55%) Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLV 101 +TTG+ +++ K LI W+ N +G + G K+ + Sbjct: 180 YTTGNILTEDKKKILIDWMAGNTTGNTLIRAGAPKSWI 217 >3BFD-A nrPDB Length = 263 Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust. Identities = 10/33 (30%), Positives = 18/33 (54%) Query: 63 RFTTGDAMSKRSKFALITWIGENVSGLQRAKTG 95 + T GDA++ + L+ W+ N +G Q + G Sbjct: 167 KLTLGDALAGPQRAQLVDWLKGNTTGGQSIRAG 199 >4WUA-A nrPDB Length = 401 Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 9/104 (8%) Query: 14 YNLVRDDGS---AVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAM 70 Y+++R G + +W+++ G V + +H+ + D++RL VR + + Sbjct: 43 YHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDP 102 Query: 71 SKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVI 114 ++ L+ +SG+ GT +V EV+ + +++I Sbjct: 103 NREMVVQLLD--DFKISGV----NGTHICMVFEVLGHHLLKWII 140 >4FR4-A nrPDB Length = 384 Score = 26.2 bits (56), Expect = 5.3, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 24/43 (55%) Query: 100 LVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGANYDAQTE 142 L++E + + KEF+I +R+++ DF K + A D Q E Sbjct: 341 LLQEHLDSVQKEFIIFNREKVNRDFNKRQPNLALEQTKDPQGE 383 >6B1P-A nrPDB Length = 471 Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 3 TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTD-DVRLFAF 61 T + + + AA ++ A WV +YDG + ++ Y+ +IQ+ D D + + Sbjct: 53 TDLSRNSIEAANAIIE----AFKWVGLEYDGEILYQSKRFEIYKEYIQKLLDEDKAYYCY 108 Query: 62 VRFTTGDAMSKRSK 75 + DA+ + K Sbjct: 109 MSKDELDALREEQK 122 >5KSC-A nrPDB Length = 261 Score = 26.2 bits (56), Expect = 5.6, Method: Compositional matrix adjust. Identities = 11/38 (28%), Positives = 20/38 (52%) Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLV 101 T G A+++ + L+TW+ N +G + G K+ V Sbjct: 166 LTLGKALAETQRAQLVTWLKGNTTGSASIRAGLPKSWV 203 >5C2I-A nrPDB Length = 468 Score = 25.8 bits (55), Expect = 7.4, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 19/25 (76%) Query: 100 LVKEVVQNFAKEFVISDRKELEEDF 124 +VK+ +Q+FA+ ++ S +K+ +E F Sbjct: 57 VVKQWIQSFAQTYITSAKKQADEAF 81 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1T3Y-A nrPDB 219 3e-58 1X67-A nrPDB 140 2e-34 4LIZ-A nrPDB 137 2e-33 Sequences not found previously or not previously below threshold: 5Y1Z-A nrPDB 75 1e-14 1QPV-A nrPDB 37 0.003 2KVK-A nrPDB 36 0.004 1CNU-A nrPDB 36 0.009 2LJ8-A nrPDB 33 0.042 5L6W-C nrPDB 32 0.11 1F7S-A nrPDB 31 0.13 1AK7-A nrPDB 30 0.23 2LXX-A nrPDB 30 0.24 5YU8-H nrPDB 30 0.31 2MV2-A nrPDB 29 0.68 2I2Q-A nrPDB 29 0.94 1ZOR-A nrPDB 29 1.1 2R5U-A nrPDB 28 1.3 6EM4-u nrPDB 27 2.5 6B1P-A nrPDB 27 3.9 4KRT-A nrPDB 27 4.2 2CXI-A nrPDB 26 4.8 5IY7-W nrPDB 26 5.5 1IJ5-A nrPDB 25 8.2 >1T3Y-A nrPDB Length = 141 Score = 219 bits (558), Expect = 3e-58, Method: Composition-based stats. Identities = 141/141 (100%), Positives = 141/141 (100%) Query: 2 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 61 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF Sbjct: 1 ATKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 60 Query: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE 121 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE Sbjct: 61 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE 120 Query: 122 EDFIKSELKKAGGANYDAQTE 142 EDFIKSELKKAGGANYDAQTE Sbjct: 121 EDFIKSELKKAGGANYDAQTE 141 >1X67-A nrPDB Length = 146 Score = 140 bits (353), Expect = 2e-34, Method: Composition-based stats. Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 7/134 (5%) Query: 1 MATKIDK--EACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDD 55 MA + + A + AY V + S W F Y+G++ V G + +++ Sbjct: 8 MAANLSRNGPALQEAYVRVVTEKSPTDWALFTYEGNSNDIRVAGTGEGGLEEMVEELNSG 67 Query: 56 VRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVIS 115 ++AF R D S KF LI W GE V+ +++ + + + ++ Sbjct: 68 KVMYAFCRVK--DPNSGLPKFVLINWTGEGVNDVRKGACASHVSTMASFLKGAHVTINAR 125 Query: 116 DRKELEEDFIKSEL 129 +++E + I ++ Sbjct: 126 AEEDVEPECIMEKV 139 >4LIZ-A nrPDB Length = 142 Score = 137 bits (344), Expect = 2e-33, Method: Composition-based stats. Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 5/126 (3%) Query: 17 VRDDGSA-VIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSK 72 V DD + V +V F V + + +D FA+ R +GD SK Sbjct: 16 VIDDKNEEVEFVVFGVQTQPNKLVVDAKGKGGLEEVKAALKEDALQFAYYRTISGDEESK 75 Query: 73 RSKFALITWIGENVSGLQ-RAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKK 131 R KF I+W GE + + RA K VK V+ NF E + +L ED I +++K Sbjct: 76 RVKFVFISWAGEGIKKPKLRAVMSILKGDVKNVINNFHIELHATSLDDLVEDEIAAKIKL 135 Query: 132 AGGANY 137 A++ Sbjct: 136 EHHAHH 141 >5Y1Z-A nrPDB Length = 137 Score = 74.8 bits (182), Expect = 1e-14, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 5/126 (3%) Query: 7 KEACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQQCTDDVRLFAFVR 63 + AAY V + SA W + Y+ + + Q + ++ F Sbjct: 12 RLELLAAYEEVIREESAADWALYTYEDGSDDLKLAASGEGGLQELSGHFENQKVMYGFCS 71 Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEED 123 D+ + K+ LI W+GE+V ++ + V E Q S ++++ Sbjct: 72 VK--DSQAALPKYVLINWVGEDVPDARKCACASHVAKVAEFFQGVDVIVNASSVEDIDAG 129 Query: 124 FIKSEL 129 I L Sbjct: 130 AIGQRL 135 >1QPV-A nrPDB Length = 143 Score = 36.7 bits (83), Expect = 0.003, Method: Composition-based stats. Identities = 16/94 (17%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Query: 45 YQHFIQQCTDDVRLFAFVRFT--TGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVK 102 Y F+++ ++ L+A F KRSK TW + + + K ++ Sbjct: 50 YDAFLEKLPENDCLYAIYDFEYEINGNEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALR 109 Query: 103 EVVQNFAKEFVISDRKELEEDFIKSELKKAGGAN 136 + + + +D E+ D + + + G++ Sbjct: 110 RALNGVSTDVQGTDFSEVSYDSVLERVSRGAGSH 143 >2KVK-A nrPDB Length = 144 Score = 36.3 bits (82), Expect = 0.004, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 4/128 (3%) Query: 7 KEACRAAYNLVRDDGSAVIWVTFKYDGSTIVP---GEQGAEYQHFIQQCTDDVRLFAFVR 63 +E+ R A + +R S + + DG I GE+ Y ++ + + + Sbjct: 9 EESVRGAIDDLRMKKSRYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFSTEKPCYVAFD 68 Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEED 123 F DA SKR K LI WI + + + + V +D L+ + Sbjct: 69 FEYNDAGSKREKLILIQWIPD-TARPREKMMYSASRDALSSVSEGYLPIQANDESGLDAE 127 Query: 124 FIKSELKK 131 I +++ Sbjct: 128 EIIRKVRL 135 >1CNU-A nrPDB Length = 137 Score = 35.5 bits (80), Expect = 0.009, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 5/112 (4%) Query: 26 WVTFKYDG-STIVPGEQGAE----YQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALIT 80 +VTFK + +T V E Y+ F Q + +A + +R+K I Sbjct: 24 YVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPERDCRYAIFDYEFQVDGGQRNKITFIL 83 Query: 81 WIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKA 132 W ++ + + K +K+ + E +D E+ ED + KK Sbjct: 84 WAPDSAPIKSKMMYTSTKDSIKKKLVGIQVEVQATDAAEISEDAVSERAKKD 135 >2LJ8-A nrPDB Length = 144 Score = 33.2 bits (74), Expect = 0.042, Method: Composition-based stats. Identities = 20/92 (21%), Positives = 40/92 (43%), Gaps = 1/92 (1%) Query: 39 GEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDK 98 GE+GA + FI+ +V +A F R K LI+W ++ + + + + Sbjct: 51 GERGANFDQFIEAIDKNVPCYAAFDFEYTTNDGPRDKLILISWNPDSGAPRTKMLYSSSR 110 Query: 99 TLVKEVVQNFAKEFVISDRKELEEDFIKSELK 130 + + Q F + +D L+ + I ++K Sbjct: 111 DALVPLTQGF-QGIQANDASGLDFEEISRKVK 141 >5L6W-C nrPDB Length = 167 Score = 31.7 bits (70), Expect = 0.11, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 41/108 (37%), Gaps = 5/108 (4%) Query: 32 DGSTIVPGEQGAE----YQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVS 87 +G I+ G+ G Y F++ D +A T SK+ I W E+ Sbjct: 52 EGKEILVGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKESKKEDLVFIFWAPESAP 111 Query: 88 GLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSELKKAGGA 135 + + K +K+ + E + +E+++ +E K G A Sbjct: 112 LKSKMIYASSKDAIKKKLTGIKHELQANCYEEVKDRCTLAE-KLGGSA 158 >1F7S-A nrPDB Length = 139 Score = 31.3 bits (69), Expect = 0.13, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 28/85 (32%), Gaps = 1/85 (1%) Query: 45 YQHFIQQCTDDVRLFAFVRFT-TGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKE 103 Y+ F D +A F ++SK I W + + + K K Sbjct: 53 YEEFAACLPADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKR 112 Query: 104 VVQNFAKEFVISDRKELEEDFIKSE 128 + E +D E++ D +S Sbjct: 113 ELDGIQVELQATDPTEMDLDVFRSR 137 >1AK7-A nrPDB Length = 174 Score = 30.5 bits (67), Expect = 0.23, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 37/102 (36%), Gaps = 4/102 (3%) Query: 32 DGSTIVPGEQGAE----YQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVS 87 +G I+ G+ G ++HF+ + +A + S++ + W E Sbjct: 60 EGKEILVGDVGVTITDPFKHFVGMLPEKDCRYALYDASFETKESRKEELMFFLWAPELAP 119 Query: 88 GLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEEDFIKSEL 129 + + K +K+ Q E + ++L I +L Sbjct: 120 LKSKMIYASSKDAIKKKFQGIKHECQANGPEDLNRACIAEKL 161 >2LXX-A nrPDB Length = 152 Score = 30.5 bits (67), Expect = 0.24, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 18/139 (12%) Query: 8 EACRAAYNLVRDDGSAVIWVTFKYDGSTIV-----PGEQGAEYQHFIQQCTDDVRLFAFV 62 +C+ AY+L+ + ++ FK D + GE+ A Y F+++ V Sbjct: 9 PSCKNAYDLLHN-KHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKEC 67 Query: 63 RFTTGDAM-----------SKRSKFALITWIGENVSGLQRAK-TGTDKTLVKEVVQNFAK 110 R+ D S +K + + +N +R + + L + Sbjct: 68 RYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLF 127 Query: 111 EFVISDRKELEEDFIKSEL 129 + S+ +L+E +KS+L Sbjct: 128 QVQASEMSDLDEKSVKSDL 146 >5YU8-H nrPDB Length = 166 Score = 30.1 bits (66), Expect = 0.31, Method: Composition-based stats. Identities = 12/86 (13%), Positives = 30/86 (34%) Query: 37 VPGEQGAEYQHFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGT 96 + Y F++ + +A T SK+ I W E+ + + Sbjct: 60 IGDTVEDPYTAFVKLLPLNDCRYALYDATYETKESKKEDLVFIFWAPESAPLKSKMIYAS 119 Query: 97 DKTLVKEVVQNFAKEFVISDRKELEE 122 K +K+ E+ ++ ++++ Sbjct: 120 SKDAIKKKFTGIKHEWQVNGLDDIKD 145 >2MV2-A nrPDB Length = 148 Score = 29.0 bits (63), Expect = 0.68, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 56/143 (39%), Gaps = 13/143 (9%) Query: 1 MATKID-KEACRAAYNLVRDDGSAVIWVTFKYDGSTI---VPGEQGAEYQHFIQ------ 50 MA+ + + C+ Y ++ D + + D I ++ AEY F++ Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYIRDEKQIDVETVADRNAEYDQFLEDIQKCG 60 Query: 51 --QCTDDVRLFAFVRFTTG-DAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQN 107 +C + F ++ G SK+ K L++W + ++ + +K+ + Sbjct: 61 PGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 120 Query: 108 FAKEFVISDRKELEEDFIKSELK 130 K +D E + ++ +L+ Sbjct: 121 VQKYIQATDLSEASREAVEEKLR 143 >2I2Q-A nrPDB Length = 137 Score = 28.6 bits (62), Expect = 0.94, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 47/129 (36%), Gaps = 5/129 (3%) Query: 8 EACRAAYNLVRDDGSAVIWVTFKY-DGSTIVPGEQGA---EYQHFIQQCTDDVRLFAFVR 63 C A+ ++ S + +V FK D T + E+ + ++ F+ + +A Sbjct: 10 PECLEAFQELKLGKS-LRYVVFKMNDTKTEIVVEKKSTDKDFDTFLGDLPEKDCRYAIYD 68 Query: 64 FTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELEED 123 F R+K I+W + + + K ++ + +D E+ + Sbjct: 69 FEFNLGEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFTGIGTDIQATDFSEVAYE 128 Query: 124 FIKSELKKA 132 + ++ + Sbjct: 129 TVLEKVTRK 137 >1ZOR-A nrPDB Length = 399 Score = 28.6 bits (62), Expect = 1.1, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 39/138 (28%), Gaps = 18/138 (13%) Query: 12 AAYNLVRDDGSAVIWVTFKYDGS----TIVPGEQGAEYQHFIQQCTDDVRLFA------- 60 AA ++R +G ++W Y+G I G + D V F Sbjct: 249 AAAQILRSEGG-MLWACMNYEGDIMSDMIASGFGSLGLMTSVLVSPDGVYEFEAAHGTVR 307 Query: 61 --FVRFTTGDAMSKRSKFALITWIG----ENVSGLQRAKTGTDKTLVKEVVQNFAKEFVI 114 + R+ G+ S ++ W G L K V+ + Sbjct: 308 RHYYRYLKGEKTSTNPTASIFAWTGAIRKRGELDGTPEVCEFADKLEKAVINTIESGVIT 367 Query: 115 SDRKELEEDFIKSELKKA 132 D + E I + Sbjct: 368 KDLQPFTEPPIDKYVTLE 385 >2R5U-A nrPDB Length = 200 Score = 28.2 bits (61), Expect = 1.3, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 40/127 (31%), Gaps = 11/127 (8%) Query: 7 KEACRAAYNLVRD---DGSAVIWVTF--KYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAF 61 + A + Y+ + D G VT + D ++ GA Y H + + Sbjct: 62 RPAHQNVYDAILDLYGRGEPADAVTVAAELDRRGLLRRIGGAPYLHTLISTVPTAANAGY 121 Query: 62 VRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKEFVISDRKELE 121 + K L + +Q G + V EVV E + L Sbjct: 122 YASIVAE------KALLRRLVEAGTRVVQYGYAGAEGADVAEVVDRAQAEIYDVADRRLS 175 Query: 122 EDFIKSE 128 EDF+ E Sbjct: 176 EDFVALE 182 >6EM4-u nrPDB Length = 199 Score = 27.4 bits (59), Expect = 2.5, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 6/95 (6%) Query: 47 HFIQQCTDDVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLV----K 102 H I +D + F F R A +R + W + + D TL + Sbjct: 17 HGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWT-KAFRKAAGKELAVDSTLTFAQRR 75 Query: 103 EVVQNFAKEFVISDRKELEE-DFIKSELKKAGGAN 136 V + +E V + K + + I+ + ++A N Sbjct: 76 NVPVRYNRELVATTLKAMARIEEIRQKRERAFYKN 110 >6B1P-A nrPDB Length = 471 Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Query: 3 TKIDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQ-CTDDVRLFAF 61 T + + + AA ++ A WV +YDG + ++ Y+ +IQ+ +D + + Sbjct: 53 TDLSRNSIEAANAII----EAFKWVGLEYDGEILYQSKRFEIYKEYIQKLLDEDKAYYCY 108 Query: 62 VRFTTGDAMSKRSK 75 + DA+ + K Sbjct: 109 MSKDELDALREEQK 122 >4KRT-A nrPDB Length = 353 Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 20/49 (40%), Gaps = 1/49 (2%) Query: 26 WVTFKYDGSTIVPGEQGA-EYQHFIQQCTDDVRLFAFVRFTTGDAMSKR 73 WV F+Y + V G G + F ++ D F TT + +K Sbjct: 184 WVGFQYSENGSVAGVNGGCDMNEFTEEIFIDSSNFNLDNATTKNVSTKL 232 >2CXI-A nrPDB Length = 348 Score = 26.3 bits (56), Expect = 4.8, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 8/57 (14%) Query: 54 DDVRLFAFVRFTTGDAMSKRSKFALIT--------WIGENVSGLQRAKTGTDKTLVK 102 +D+ L+A + + F L + W E V+ + G +K L K Sbjct: 25 EDLVLYAKCELDDVWEENGKVYFKLDSKDTNRPDLWSAEGVARQIKWALGIEKGLPK 81 >5IY7-W nrPDB Length = 760 Score = 26.3 bits (56), Expect = 5.5, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 23/57 (40%) Query: 55 DVRLFAFVRFTTGDAMSKRSKFALITWIGENVSGLQRAKTGTDKTLVKEVVQNFAKE 111 + +FA RF GD K ++ N++ K ++++ Q F +E Sbjct: 675 GLMVFADKRFARGDKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHRE 731 >1IJ5-A nrPDB Length = 323 Score = 25.5 bits (54), Expect = 8.2, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 24/68 (35%) Query: 5 IDKEACRAAYNLVRDDGSAVIWVTFKYDGSTIVPGEQGAEYQHFIQQCTDDVRLFAFVRF 64 + ++ R + + D +V F+Y +EY H L+AF F Sbjct: 205 LSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADF 264 Query: 65 TTGDAMSK 72 +SK Sbjct: 265 DKSGQLSK 272 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.127 0.325 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,972,416 Number of Sequences: 36641 Number of extensions: 178578 Number of successful extensions: 546 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 502 Number of HSP's gapped (non-prelim): 58 length of query: 142 length of database: 10,336,785 effective HSP length: 87 effective length of query: 55 effective length of database: 7,149,018 effective search space: 393195990 effective search space used: 393195990 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 54 (25.5 bits)