BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q13889
(308 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
5IY9-3 nrPDB 638 0.0
6GYM-4 nrPDB 137 8e-33
5OQM-4 nrPDB 122 2e-28
5NUS-A nrPDB 100 7e-22
5OQJ-6 nrPDB 33 0.13
3R7L-A nrPDB 28 3.8
3O07-A nrPDB 28 6.4
>5IY9-3 nrPDB
Length = 308
Score = 638 bits (1646), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60
MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI
Sbjct: 1 MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60
Query: 61 ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120
ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT
Sbjct: 61 ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120
Query: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180
KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV
Sbjct: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180
Query: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240
IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ
Sbjct: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240
Query: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300
LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK
Sbjct: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300
Query: 301 KKKLKVSA 308
KKKLKVSA
Sbjct: 301 KKKLKVSA 308
>6GYM-4 nrPDB
Length = 338
Score = 137 bits (344), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 23/321 (7%)
Query: 5 EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
E+ +LL ++++ P +W + ++ K ++A++V N+HL N +NK+AVIA++
Sbjct: 20 EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79
Query: 64 IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
Q ++LYP Y + +E +VEEI L + K
Sbjct: 80 SQGIKYLYPXXXXXXXXXXXXXXX--XXXXXXXXXXXYRRFRNVDETLVEEIYKLFELEK 137
Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
I+ + LAG+++ L Y++R++KE +KSR+LV+ +++D QY+
Sbjct: 138 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 196
Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
MN IF+A K ID + +S LQQ D T G+YL V L+QYL D
Sbjct: 197 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 256
Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
R ++ P VD+R +C+ ++ +G++CSVCL + P C C++ F
Sbjct: 257 SLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 316
Query: 290 --KISLPPV---LKAKKKKLK 305
K+ PV LKAKKK K
Sbjct: 317 IAKLKRKPVVPRLKAKKKVTK 337
>5OQM-4 nrPDB
Length = 333
Score = 122 bits (306), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 28/321 (8%)
Query: 5 EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
E+ +LL ++++ P +W + ++ K ++A++V N+HL N +NK+AVIA++
Sbjct: 20 EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79
Query: 64 IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
Q ++LYP Y + +E +VEEI L + K
Sbjct: 80 SQGIKYLYPXXXXXXXXXXXX-------XXXXXXXXXYRRFRNVDETLVEEIYKLFELEK 132
Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
I+ + LAG+++ L Y++R++KE +KSR+LV+ +++D QY+
Sbjct: 133 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 191
Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
MN IF+A K ID + +S LQQ D T G+YL V L+QYL D
Sbjct: 192 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 251
Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
+C+ ++ +G++CSVCL + P C C++ F
Sbjct: 252 XXXXXXXXXXXXXXXXXTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 311
Query: 290 --KISLPPV---LKAKKKKLK 305
K+ PV LKAKKK K
Sbjct: 312 IAKLKRKPVVPRLKAKKKVTK 332
>5NUS-A nrPDB
Length = 303
Score = 100 bits (249), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 67/275 (24%)
Query: 5 EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHI 64
+D +L I++D NP W A LSK I +++ N+HL + SN++A+IASH
Sbjct: 45 DDIPSLRTIIIDTNPRAWAALA---DVLPLSKAIANILIFVNAHLAFSNSNQVAIIASHT 101
Query: 65 QESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKD-----------GKYELLTSANEVIVE 113
+ +LYP PPE PSGS GKY + ++
Sbjct: 102 NRAVWLYP--------------QPPEPLPSGSSSHDAAARKSATIGKYPQFAQIEKSLLS 147
Query: 114 EIKDLM---TKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQE-------------- 156
I+ LM T SD+ T T ++G+L AL +I++ + +
Sbjct: 148 SIRALMDDTTPSDLDT--TTTQISGALTLALAHINKTALSLTASNTAAAAVATGHSLTAG 205
Query: 157 --------------------MKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVL 196
+ +RIL+I ++ SA QY+ MN +FAA I ID L
Sbjct: 206 SAASVAAKAASTSTSAGLAGLHARILIISVSDSSAAQYIPTMNAVFAAAHARIAIDTLAL 265
Query: 197 DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVF 231
+ L+QA IT G +++ + LLQYL++ F
Sbjct: 266 RGSATFLEQASFITRGTFIRAAEPRGLLQYLMFGF 300
>5OQJ-6 nrPDB
Length = 461
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 244 PPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCE 286
P + D C CH L+ GY C C S C+ +C C+
Sbjct: 325 PTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCD 367
>3R7L-A nrPDB
Length = 304
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 104 LTSANEVIVEEIKDLM-TKSDIKGQHTETLLAGSLAKALCY 143
LT+ +E+ EEIKDL+ T ++K T+ L G A L +
Sbjct: 4 LTTMSELSTEEIKDLLQTAQELKSGKTDNQLTGKFAANLFF 44
>3O07-A nrPDB
Length = 291
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 135 GSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQ--NILID 192
G +++A+ +I R+ +E+K Q++KS + K AE+ + +V+ + N
Sbjct: 148 GDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAG 207
Query: 193 ACVLDSDSGLLQQ-ACD 208
+D+ LL Q CD
Sbjct: 208 GVATPADAALLMQLGCD 224
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
5IY9-3 nrPDB 475 e-135
6GYM-4 nrPDB 353 8e-98
5OQM-4 nrPDB 318 2e-87
5NUS-A nrPDB 237 6e-63
Sequences not found previously or not previously below threshold:
5OQJ-6 nrPDB 40 0.002
4LAT-A nrPDB 28 6.0
2LCQ-A nrPDB 28 6.8
>5IY9-3 nrPDB
Length = 308
Score = 475 bits (1223), Expect = e-135, Method: Composition-based stats.
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60
MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI
Sbjct: 1 MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60
Query: 61 ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120
ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT
Sbjct: 61 ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120
Query: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180
KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV
Sbjct: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180
Query: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240
IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ
Sbjct: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240
Query: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300
LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK
Sbjct: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300
Query: 301 KKKLKVSA 308
KKKLKVSA
Sbjct: 301 KKKLKVSA 308
>6GYM-4 nrPDB
Length = 338
Score = 353 bits (905), Expect = 8e-98, Method: Composition-based stats.
Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 23/321 (7%)
Query: 5 EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
E+ +LL ++++ P +W + ++ K ++A++V N+HL N +NK+AVIA++
Sbjct: 20 EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79
Query: 64 IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
Q ++LYP Y + +E +VEEI L + K
Sbjct: 80 SQGIKYLYPXXXXXXXXXXXXXXXXXXXXXXXXX--XYRRFRNVDETLVEEIYKLFELEK 137
Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
I+ + LAG+++ L Y++R++KE +KSR+LV+ +++D QY+
Sbjct: 138 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 196
Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
MN IF+A K ID + +S LQQ D T G+YL V L+QYL D
Sbjct: 197 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 256
Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
R ++ P VD+R +C+ ++ +G++CSVCL + P C C++ F
Sbjct: 257 SLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 316
Query: 290 --KISLPPV---LKAKKKKLK 305
K+ PV LKAKKK K
Sbjct: 317 IAKLKRKPVVPRLKAKKKVTK 337
>5OQM-4 nrPDB
Length = 333
Score = 318 bits (815), Expect = 2e-87, Method: Composition-based stats.
Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 28/321 (8%)
Query: 5 EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
E+ +LL ++++ P +W + ++ K ++A++V N+HL N +NK+AVIA++
Sbjct: 20 EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79
Query: 64 IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
Q ++LYP Y + +E +VEEI L + K
Sbjct: 80 SQGIKYLYPXXXXXXXXXXXXXXXX-------XXXXXYRRFRNVDETLVEEIYKLFELEK 132
Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
I+ + LAG+++ L Y++R++KE +KSR+LV+ +++D QY+
Sbjct: 133 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 191
Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
MN IF+A K ID + +S LQQ D T G+YL V L+QYL D
Sbjct: 192 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 251
Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
+C+ ++ +G++CSVCL + P C C++ F
Sbjct: 252 XXXXXXXXXXXXXXXXXTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 311
Query: 290 --KISLPPV---LKAKKKKLK 305
K+ PV LKAKKK K
Sbjct: 312 IAKLKRKPVVPRLKAKKKVTK 332
>5NUS-A nrPDB
Length = 303
Score = 237 bits (604), Expect = 6e-63, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 67/275 (24%)
Query: 5 EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHI 64
+D +L I++D NP W A LSK I +++ N+HL + SN++A+IASH
Sbjct: 45 DDIPSLRTIIIDTNPRAWAALA---DVLPLSKAIANILIFVNAHLAFSNSNQVAIIASHT 101
Query: 65 QESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKD-----------GKYELLTSANEVIVE 113
+ +LYP PPE PSGS GKY + ++
Sbjct: 102 NRAVWLYP--------------QPPEPLPSGSSSHDAAARKSATIGKYPQFAQIEKSLLS 147
Query: 114 EIKDLM---TKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQE-------------- 156
I+ LM T SD+ T T ++G+L AL +I++ + +
Sbjct: 148 SIRALMDDTTPSDLDT--TTTQISGALTLALAHINKTALSLTASNTAAAAVATGHSLTAG 205
Query: 157 --------------------MKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVL 196
+ +RIL+I ++ SA QY+ MN +FAA I ID L
Sbjct: 206 SAASVAAKAASTSTSAGLAGLHARILIISVSDSSAAQYIPTMNAVFAAAHARIAIDTLAL 265
Query: 197 DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVF 231
+ L+QA IT G +++ + LLQYL++ F
Sbjct: 266 RGSATFLEQASFITRGTFIRAAEPRGLLQYLMFGF 300
>5OQJ-6 nrPDB
Length = 461
Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 244 PPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCE 286
P + D C CH L+ GY C C S C+ +C C+
Sbjct: 325 PTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCD 367
>4LAT-A nrPDB
Length = 265
Score = 27.7 bits (60), Expect = 6.0, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 20/52 (38%)
Query: 183 AAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPD 234
A D +++ S + Q D G + V + P + YL ++ D
Sbjct: 129 AGSGSRATFDTVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDD 180
>2LCQ-A nrPDB
Length = 165
Score = 27.7 bits (60), Expect = 6.8, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 251 YRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAFKI 291
+R + +I+ YVC C F P +C C + K+
Sbjct: 118 FRTLKRGIKKVIKWRYVCIGCGRKFSTLPPGGVCPDCGSKVKL 160
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.322 0.131 0.347
Lambda K H
0.267 0.0397 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,946,116
Number of Sequences: 36641
Number of extensions: 417388
Number of successful extensions: 1103
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1058
Number of HSP's gapped (non-prelim): 31
length of query: 308
length of database: 10,336,785
effective HSP length: 97
effective length of query: 211
effective length of database: 6,782,608
effective search space: 1431130288
effective search space used: 1431130288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.4 bits)