BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q13889
         (308 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5IY9-3 nrPDB                                                          638   0.0  
6GYM-4 nrPDB                                                          137   8e-33
5OQM-4 nrPDB                                                          122   2e-28
5NUS-A nrPDB                                                          100   7e-22
5OQJ-6 nrPDB                                                           33   0.13 
3R7L-A nrPDB                                                           28   3.8  
3O07-A nrPDB                                                           28   6.4  

>5IY9-3 nrPDB
          Length = 308

 Score =  638 bits (1646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 308/308 (100%), Positives = 308/308 (100%)

Query: 1   MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60
           MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI
Sbjct: 1   MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60

Query: 61  ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120
           ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT
Sbjct: 61  ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120

Query: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180
           KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV
Sbjct: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180

Query: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240
           IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ
Sbjct: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240

Query: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300
           LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK
Sbjct: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300

Query: 301 KKKLKVSA 308
           KKKLKVSA
Sbjct: 301 KKKLKVSA 308


>6GYM-4 nrPDB
          Length = 338

 Score =  137 bits (344), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 23/321 (7%)

Query: 5   EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
           E+  +LL ++++  P +W         + ++ K ++A++V  N+HL  N +NK+AVIA++
Sbjct: 20  EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79

Query: 64  IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
            Q  ++LYP                            Y    + +E +VEEI  L  + K
Sbjct: 80  SQGIKYLYPXXXXXXXXXXXXXXX--XXXXXXXXXXXYRRFRNVDETLVEEIYKLFELEK 137

Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
             I+     + LAG+++  L Y++R++KE      +KSR+LV+     +++D   QY+  
Sbjct: 138 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 196

Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
           MN IF+A K    ID   +    +S  LQQ  D T G+YL V     L+QYL      D 
Sbjct: 197 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 256

Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
             R  ++ P    VD+R +C+    ++ +G++CSVCL +     P   C  C++ F    
Sbjct: 257 SLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 316

Query: 290 --KISLPPV---LKAKKKKLK 305
             K+   PV   LKAKKK  K
Sbjct: 317 IAKLKRKPVVPRLKAKKKVTK 337


>5OQM-4 nrPDB
          Length = 333

 Score =  122 bits (306), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 28/321 (8%)

Query: 5   EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
           E+  +LL ++++  P +W         + ++ K ++A++V  N+HL  N +NK+AVIA++
Sbjct: 20  EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79

Query: 64  IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
            Q  ++LYP                            Y    + +E +VEEI  L  + K
Sbjct: 80  SQGIKYLYPXXXXXXXXXXXX-------XXXXXXXXXYRRFRNVDETLVEEIYKLFELEK 132

Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
             I+     + LAG+++  L Y++R++KE      +KSR+LV+     +++D   QY+  
Sbjct: 133 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 191

Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
           MN IF+A K    ID   +    +S  LQQ  D T G+YL V     L+QYL      D 
Sbjct: 192 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 251

Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
                             +C+    ++ +G++CSVCL +     P   C  C++ F    
Sbjct: 252 XXXXXXXXXXXXXXXXXTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 311

Query: 290 --KISLPPV---LKAKKKKLK 305
             K+   PV   LKAKKK  K
Sbjct: 312 IAKLKRKPVVPRLKAKKKVTK 332


>5NUS-A nrPDB
          Length = 303

 Score =  100 bits (249), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 67/275 (24%)

Query: 5   EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHI 64
           +D  +L  I++D NP  W   A       LSK I  +++  N+HL  + SN++A+IASH 
Sbjct: 45  DDIPSLRTIIIDTNPRAWAALA---DVLPLSKAIANILIFVNAHLAFSNSNQVAIIASHT 101

Query: 65  QESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKD-----------GKYELLTSANEVIVE 113
             + +LYP               PPE  PSGS             GKY       + ++ 
Sbjct: 102 NRAVWLYP--------------QPPEPLPSGSSSHDAAARKSATIGKYPQFAQIEKSLLS 147

Query: 114 EIKDLM---TKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQE-------------- 156
            I+ LM   T SD+    T T ++G+L  AL +I++    +  +                
Sbjct: 148 SIRALMDDTTPSDLDT--TTTQISGALTLALAHINKTALSLTASNTAAAAVATGHSLTAG 205

Query: 157 --------------------MKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVL 196
                               + +RIL+I  ++ SA QY+  MN +FAA    I ID   L
Sbjct: 206 SAASVAAKAASTSTSAGLAGLHARILIISVSDSSAAQYIPTMNAVFAAAHARIAIDTLAL 265

Query: 197 DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVF 231
              +  L+QA  IT G +++  +   LLQYL++ F
Sbjct: 266 RGSATFLEQASFITRGTFIRAAEPRGLLQYLMFGF 300


>5OQJ-6 nrPDB
          Length = 461

 Score = 33.5 bits (75), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 244 PPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCE 286
           P  +  D    C CH  L+  GY C  C S  C+   +C  C+
Sbjct: 325 PTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCD 367


>3R7L-A nrPDB
          Length = 304

 Score = 28.5 bits (62), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)

Query: 104 LTSANEVIVEEIKDLM-TKSDIKGQHTETLLAGSLAKALCY 143
           LT+ +E+  EEIKDL+ T  ++K   T+  L G  A  L +
Sbjct: 4   LTTMSELSTEEIKDLLQTAQELKSGKTDNQLTGKFAANLFF 44


>3O07-A nrPDB
          Length = 291

 Score = 27.7 bits (60), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 3/77 (3%)

Query: 135 GSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNVIFAAQKQ--NILID 192
           G +++A+ +I R+ +E+K  Q++KS   + K AE+  +      +V+   +    N    
Sbjct: 148 GDVSEAVKHIRRITEEIKACQQLKSEDDIAKVAEEMRVPVSLLKDVLEKGKLPVVNFAAG 207

Query: 193 ACVLDSDSGLLQQ-ACD 208
                +D+ LL Q  CD
Sbjct: 208 GVATPADAALLMQLGCD 224


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5IY9-3 nrPDB                                                          475   e-135
6GYM-4 nrPDB                                                          353   8e-98
5OQM-4 nrPDB                                                          318   2e-87
5NUS-A nrPDB                                                          237   6e-63

Sequences not found previously or not previously below threshold:

5OQJ-6 nrPDB                                                           40   0.002
4LAT-A nrPDB                                                           28   6.0  
2LCQ-A nrPDB                                                           28   6.8  

>5IY9-3 nrPDB
          Length = 308

 Score =  475 bits (1223), Expect = e-135,   Method: Composition-based stats.
 Identities = 308/308 (100%), Positives = 308/308 (100%)

Query: 1   MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60
           MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI
Sbjct: 1   MVSDEDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVI 60

Query: 61  ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120
           ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT
Sbjct: 61  ASHIQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDLMT 120

Query: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180
           KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV
Sbjct: 121 KSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIKAAEDSALQYMNFMNV 180

Query: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240
           IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ
Sbjct: 181 IFAAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQDQRSQ 240

Query: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300
           LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK
Sbjct: 241 LILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKISLPPVLKAK 300

Query: 301 KKKLKVSA 308
           KKKLKVSA
Sbjct: 301 KKKLKVSA 308


>6GYM-4 nrPDB
          Length = 338

 Score =  353 bits (905), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 156/321 (48%), Gaps = 23/321 (7%)

Query: 5   EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
           E+  +LL ++++  P +W         + ++ K ++A++V  N+HL  N +NK+AVIA++
Sbjct: 20  EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79

Query: 64  IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
            Q  ++LYP                            Y    + +E +VEEI  L  + K
Sbjct: 80  SQGIKYLYPXXXXXXXXXXXXXXXXXXXXXXXXX--XYRRFRNVDETLVEEIYKLFELEK 137

Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
             I+     + LAG+++  L Y++R++KE      +KSR+LV+     +++D   QY+  
Sbjct: 138 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 196

Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
           MN IF+A K    ID   +    +S  LQQ  D T G+YL V     L+QYL      D 
Sbjct: 197 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 256

Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
             R  ++ P    VD+R +C+    ++ +G++CSVCL +     P   C  C++ F    
Sbjct: 257 SLRPIIVKPNHGSVDFRTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 316

Query: 290 --KISLPPV---LKAKKKKLK 305
             K+   PV   LKAKKK  K
Sbjct: 317 IAKLKRKPVVPRLKAKKKVTK 337


>5OQM-4 nrPDB
          Length = 333

 Score =  318 bits (815), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 91/321 (28%), Positives = 148/321 (46%), Gaps = 28/321 (8%)

Query: 5   EDELNLLVIVVDANP-IWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASH 63
           E+  +LL ++++  P +W         + ++ K ++A++V  N+HL  N +NK+AVIA++
Sbjct: 20  EESPSLLTVIIEIAPKLWTTFDEEGNEKGSIIKVLEALIVFLNAHLAFNSANKVAVIAAY 79

Query: 64  IQESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKDGKYELLTSANEVIVEEIKDL--MTK 121
            Q  ++LYP                            Y    + +E +VEEI  L  + K
Sbjct: 80  SQGIKYLYPXXXXXXXXXXXXXXXX-------XXXXXYRRFRNVDETLVEEIYKLFELEK 132

Query: 122 SDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQEMKSRILVIK----AAEDSALQYMNF 177
             I+     + LAG+++  L Y++R++KE      +KSR+LV+     +++D   QY+  
Sbjct: 133 KQIEQNSQRSTLAGAMSAGLTYVNRISKE-SVTTSLKSRLLVLTCGSGSSKDEIFQYIPI 191

Query: 178 MNVIFAAQKQNILIDACVL--DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPDQ 235
           MN IF+A K    ID   +    +S  LQQ  D T G+YL V     L+QYL      D 
Sbjct: 192 MNCIFSATKMKCPIDVVKIGGSKESTFLQQTTDATNGVYLHVESTEGLIQYLATAMFIDP 251

Query: 236 DQRSQLILPPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAF---- 289
                             +C+    ++ +G++CSVCL +     P   C  C++ F    
Sbjct: 252 XXXXXXXXXXXXXXXXXTSCYLTGRVVAVGFICSVCLCVLSIIPPGNKCPACDSQFDEHV 311

Query: 290 --KISLPPV---LKAKKKKLK 305
             K+   PV   LKAKKK  K
Sbjct: 312 IAKLKRKPVVPRLKAKKKVTK 332


>5NUS-A nrPDB
          Length = 303

 Score =  237 bits (604), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 77/275 (28%), Positives = 119/275 (43%), Gaps = 67/275 (24%)

Query: 5   EDELNLLVIVVDANPIWWGKQALKESQFTLSKCIDAVMVLGNSHLFMNRSNKLAVIASHI 64
           +D  +L  I++D NP  W   A       LSK I  +++  N+HL  + SN++A+IASH 
Sbjct: 45  DDIPSLRTIIIDTNPRAWAALA---DVLPLSKAIANILIFVNAHLAFSNSNQVAIIASHT 101

Query: 65  QESRFLYPGKNGRLGDFFGDPGNPPEFNPSGSKD-----------GKYELLTSANEVIVE 113
             + +LYP               PPE  PSGS             GKY       + ++ 
Sbjct: 102 NRAVWLYP--------------QPPEPLPSGSSSHDAAARKSATIGKYPQFAQIEKSLLS 147

Query: 114 EIKDLM---TKSDIKGQHTETLLAGSLAKALCYIHRMNKEVKDNQE-------------- 156
            I+ LM   T SD+    T T ++G+L  AL +I++    +  +                
Sbjct: 148 SIRALMDDTTPSDLDT--TTTQISGALTLALAHINKTALSLTASNTAAAAVATGHSLTAG 205

Query: 157 --------------------MKSRILVIKAAEDSALQYMNFMNVIFAAQKQNILIDACVL 196
                               + +RIL+I  ++ SA QY+  MN +FAA    I ID   L
Sbjct: 206 SAASVAAKAASTSTSAGLAGLHARILIISVSDSSAAQYIPTMNAVFAAAHARIAIDTLAL 265

Query: 197 DSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVF 231
              +  L+QA  IT G +++  +   LLQYL++ F
Sbjct: 266 RGSATFLEQASFITRGTFIRAAEPRGLLQYLMFGF 300


>5OQJ-6 nrPDB
          Length = 461

 Score = 39.7 bits (91), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 244 PPPVHVDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCE 286
           P  +  D    C CH  L+  GY C  C S  C+   +C  C+
Sbjct: 325 PTRIFEDTPTFCSCHSKLVYGGYFCPNCHSKVCSLPTVCPCCD 367


>4LAT-A nrPDB
          Length = 265

 Score = 27.7 bits (60), Expect = 6.0,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 183 AAQKQNILIDACVLDSDSGLLQQACDITGGLYLKVPQMPSLLQYLLWVFLPD 234
           A        D  +++  S +  Q  D  G +   V + P  + YL   ++ D
Sbjct: 129 AGSGSRATFDTVIMEGQSAMQSQEQDSNGAVKSIVSKSPGAISYLSLTYIDD 180


>2LCQ-A nrPDB
          Length = 165

 Score = 27.7 bits (60), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 251 YRAACFCHRNLIEIGYVCSVCLSIFCNFSP--ICTTCETAFKI 291
           +R      + +I+  YVC  C   F    P  +C  C +  K+
Sbjct: 118 FRTLKRGIKKVIKWRYVCIGCGRKFSTLPPGGVCPDCGSKVKL 160


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.322    0.131    0.347 

Lambda     K      H
   0.267   0.0397    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,946,116
Number of Sequences: 36641
Number of extensions: 417388
Number of successful extensions: 1103
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1058
Number of HSP's gapped (non-prelim): 31
length of query: 308
length of database: 10,336,785
effective HSP length: 97
effective length of query: 211
effective length of database: 6,782,608
effective search space: 1431130288
effective search space used: 1431130288
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.4 bits)