BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q13888 (395 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5OF4-E nrPDB 821 0.0 6NMI-E nrPDB 610 e-175 5OQJ-6 nrPDB 244 3e-65 5NUS-B nrPDB 71 8e-13 5OBZ-B nrPDB 46 4e-05 2X5N-A nrPDB 42 6e-04 5A5B-W nrPDB 39 0.003 6FVX-W nrPDB 39 0.003 6MSK-b nrPDB 37 0.012 5AY7-A nrPDB 33 0.27 6N8N-Y nrPDB 31 0.96 5FMF-R nrPDB 31 1.1 1UQW-A nrPDB 30 1.2 6GYM-W nrPDB 30 1.8 5OQJ-W nrPDB 30 1.8 5OQM-W nrPDB 30 1.9 5FZ5-W nrPDB 30 1.9 4CFG-A nrPDB 30 2.4 4ZQU-A nrPDB 28 7.1 3BPQ-B nrPDB 28 9.5 >5OF4-E nrPDB Length = 395 Score = 821 bits (2121), Expect = 0.0, Method: Compositional matrix adjust. Identities = 395/395 (100%), Positives = 395/395 (100%) Query: 1 MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH 60 MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH Sbjct: 1 MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH 60 Query: 61 LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL 120 LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL Sbjct: 61 LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL 120 Query: 121 SGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS 180 SGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS Sbjct: 121 SGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS 180 Query: 181 NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP 240 NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP Sbjct: 181 NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP 240 Query: 241 ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE 300 ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE Sbjct: 241 ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE 300 Query: 301 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC 360 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC Sbjct: 301 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC 360 Query: 361 AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV 395 AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV Sbjct: 361 AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV 395 >6NMI-E nrPDB Length = 366 Score = 610 bits (1572), Expect = e-175, Method: Compositional matrix adjust. Identities = 310/337 (91%), Positives = 310/337 (91%), Gaps = 6/337 (1%) Query: 51 GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK 110 GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK Sbjct: 36 GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK 95 Query: 111 SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLII 170 SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLII Sbjct: 96 SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLII 155 Query: 171 FSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKE 230 FSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKE Sbjct: 156 FSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKE 215 Query: 231 LLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYF 290 LLTHHVSPPPASSSSECSLIRMGFPQHTI GGYF Sbjct: 216 LLTHHVSPPPASSSSECSLIRMGFPQHTIXXXXXXXXXXXXXXX------XXXXXXGGYF 269 Query: 291 CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQG 350 CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQG Sbjct: 270 CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQG 329 Query: 351 ELKDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIH 387 ELKDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIH Sbjct: 330 ELKDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIH 366 >5OQJ-6 nrPDB Length = 461 Score = 244 bits (624), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 136/393 (34%), Positives = 199/393 (50%), Gaps = 26/393 (6%) Query: 11 WEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRT 70 WE +R+W+++K D+ G + + + I+ K++ ++ + G++R L + +D S Sbjct: 76 WEDEIKRSWDLVKVDDEGDMASLVASIVEARKKRTAKKNITPYQRGIIRSLILTLDCSEA 135 Query: 71 MEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITS 130 M ++DL+PNR ++ FV E+FDQNPISQ+GII+ ++ A+ ++++SGNP+ HI + Sbjct: 136 MLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQLVSQVSGNPQDHIDA 195 Query: 131 LKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLK 190 LK G PSL N+L +A L +P H +REVLI+F SL+T DP +I+ I +L Sbjct: 196 LKSIRKQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLV 255 Query: 191 AAKIRVSVIGLSAEVRVCTVLARETG----GTYHVILDESHYKELLTHHVSPPPASSSSE 246 + KIRV V+GLSA+V +C L + T Y ++LDE+H KEL V+P Sbjct: 256 SEKIRVKVLGLSAQVAICKELCKATNYGDESFYKILLDETHLKELFNEAVTPXXXXXXXX 315 Query: 247 CSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECK 306 I + P+F H L GGYFCP C +K C LP C Sbjct: 316 XXXXXXXXXPTRIF-----EDTPTFCSCH------SKLVYGGYFCPNCHSKVCSLPTVCP 364 Query: 307 ICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHV--------- 357 C L L+ F E+P E C+ CQ Sbjct: 365 CCDLMLILXXXXXXXXXXXXXXKTFAEVPTTEKFRSEDCFSCQSRFPXXXXXXXXXXXXX 424 Query: 358 --YVCAVCQNVFCVDCDVFVHDSLHCCPGCIHK 388 Y C C+ FCVDCDVF+H+ LH CPGC K Sbjct: 425 SRYRCEDCKQEFCVDCDVFIHEILHNCPGCESK 457 >5NUS-B nrPDB Length = 113 Score = 71.2 bits (173), Expect = 8e-13, Method: Composition-based stats. Identities = 33/79 (41%), Positives = 42/79 (53%), Gaps = 8/79 (10%) Query: 315 APHLARSYHHLFPLDAFQEIPLEEYNGER--FCYGC------QGELKDQHVYVCAVCQNV 366 + HLARSYHHLFPL + E+ E + C+ C G + Y C C Sbjct: 2 STHLARSYHHLFPLKGWVEVSWAEARKSKQVGCFACLAPFPSNGNGSESGRYKCPTCGKH 61 Query: 367 FCVDCDVFVHDSLHCCPGC 385 FC+DCDVF H+ +H CPGC Sbjct: 62 FCIDCDVFAHEVIHNCPGC 80 >5OBZ-B nrPDB Length = 167 Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 16/28 (57%), Positives = 19/28 (67%) Query: 358 YVCAVCQNVFCVDCDVFVHDSLHCCPGC 385 Y C C FC+DCDVF H+ +H CPGC Sbjct: 107 YKCPTCGKHFCIDCDVFAHEVIHNCPGC 134 Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust. Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 317 HLARSYHHLFPLDAFQEIPLEEYNGER--FCYGC 348 HLARSYHHLFPL + E+ E + C+ C Sbjct: 4 HLARSYHHLFPLKGWVEVSWAEARKSKQVGCFAC 37 >2X5N-A nrPDB Length = 192 Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 28/138 (20%), Positives = 57/138 (41%), Gaps = 4/138 (2%) Query: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122 +++D S M + D P R + + + NP + G++ + L+ L+ Sbjct: 7 ILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQVLSTLTR 66 Query: 123 NPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLTTCDPSN 181 + K ++++ D+ G + + IA LKH R+ ++ F S D N Sbjct: 67 DYGKFLSAMH---DLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPIVEDEKN 123 Query: 182 IYDLIKTLKAAKIRVSVI 199 + L K +K + + +I Sbjct: 124 LIRLAKRMKKNNVAIDII 141 >5A5B-W nrPDB Length = 268 Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 17/183 (9%) Query: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122 +V+D S + D R + +E+ + + NP + +G+I L+ + Sbjct: 8 LVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTA 67 Query: 123 NPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDP--- 179 K + L D G+ + +L IA TLKH + ++ F C P Sbjct: 68 EFGKILAGLH---DTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAF----VCSPISD 120 Query: 180 --SNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVS 237 + L KTLK + V +I E+ T L E + +E+ + LLT V+ Sbjct: 121 SRDELIRLAKTLKKNNVAVDIINF-GEIEQNTELLDEFIAAVNNPQEETSH--LLT--VT 175 Query: 238 PPP 240 P P Sbjct: 176 PGP 178 >6FVX-W nrPDB Length = 197 Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust. Identities = 32/144 (22%), Positives = 55/144 (38%), Gaps = 12/144 (8%) Query: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122 +V+D S + D R + +E+ + + NP + +G+I L+ + Sbjct: 8 LVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRVLSTFTA 67 Query: 123 NPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDP--- 179 K + L D G+ + +L IA TLKH + ++ F C P Sbjct: 68 EFGKILAGLH---DTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAF----VCSPISD 120 Query: 180 --SNIYDLIKTLKAAKIRVSVIGL 201 + L KTLK + V +I Sbjct: 121 SRDELIRLAKTLKKNNVAVDIINF 144 >6MSK-b nrPDB Length = 377 Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust. Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Query: 57 MMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEK 116 ++ V VD S M + D P RL + NP + +G+I T + E Sbjct: 2 VLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLI-TLANDCEV 60 Query: 117 LTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLT 175 LT L+ + + ++ L + G+ + + +A LKH G + +I F S Sbjct: 61 LTTLTPDTGRILSKLHT---VQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPV 117 Query: 176 TCDPSNIYDLIKTLKAAKIRVSVIGLSAE 204 + ++ L K LK K+ V +I E Sbjct: 118 EDNEKDLVKLAKRLKKEKVNVDIINFGEE 146 >5AY7-A nrPDB Length = 355 Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust. Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 30/160 (18%) Query: 102 SQIGIIVTKSKRAEKLT--ELSGNPRKHITSL---------------KKAVDMTCH-GEP 143 SQIG + + ++ L+ E N + HI ++ + D + G P Sbjct: 100 SQIGSWMYQDEKGNLLSKEEFYANMKHHIQAIVNRYKDVVYCWDVVNEAVADSPVYPGRP 159 Query: 144 SLYNS--LSIAMQTLKHMPGHTSREV----LIIFSSLTTCDPSN---IYDLIKTLKAAKI 194 L NS IA + + + E L+ ++ +P+ IY+L+K +K A + Sbjct: 160 ELRNSPMYQIAGEEFIYKAFEYAHEADPDALLFYNDYNDAEPAKSQRIYNLVKRMKDAGV 219 Query: 195 RVSVIGLSAEVRVCTVLARETGGT---YHVILDESHYKEL 231 + IG+ A V +E Y ++D H EL Sbjct: 220 PIDGIGMQAHYNVYGPTMKEVDDAIKLYSTVVDHIHLTEL 259 >6N8N-Y nrPDB Length = 364 Score = 30.8 bits (68), Expect = 0.96, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 39/103 (37%), Gaps = 15/103 (14%) Query: 239 PPASSSSECSLIRMGFPQHTIASLSDQDAKPS--------FSMAHLDGNTEPGLTLGGYF 290 PP+ SSE I+ H I + + A S + L G E G + Sbjct: 250 PPSKESSEGHFIKRAANSHRIIDIQESQANCSHFFIEPLKWMQPELQGKQE---LEGKFS 306 Query: 291 CPQCRAK---YCELPVECKICGLTLVSAPHLARSYHHLFPLDA 330 CP C +K Y C CG ++ A HL S FPL + Sbjct: 307 CPGCSSKVGGYNWKGSRCS-CGKWVIPAIHLQTSKVDQFPLQS 348 >5FMF-R nrPDB Length = 160 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 6/64 (9%) Query: 239 PPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAH-LDGNTEPGLTLGGYFCPQCRAK 297 PP S S E + +P H I ++ + + + LD N+EP GY CP C K Sbjct: 76 PPNSKSVERVYYYVKYP-HAIDAIKWKVHQVVQRLKDDLDKNSEPN----GYMCPICLTK 130 Query: 298 YCEL 301 Y +L Sbjct: 131 YTQL 134 >1UQW-A nrPDB Length = 509 Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 167 VLIIFSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLAR-----ETGGTYHV 221 V+ + S+ TT DP + D + A + GL E+++ VLA + G TY V Sbjct: 28 VVAVGSNFTTLDPYDANDTLSQAVAKSFYQGLFGLDKEMKLKNVLAESYTVSDDGITYTV 87 Query: 222 ILDE 225 L E Sbjct: 88 KLRE 91 >6GYM-W nrPDB Length = 332 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Query: 276 LDGNTEPGLTLGGYFCPQCRAKYCEL 301 LD N+EP GY CP C KY +L Sbjct: 113 LDKNSEPN----GYMCPICLTKYTQL 134 >5OQJ-W nrPDB Length = 586 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Query: 276 LDGNTEPGLTLGGYFCPQCRAKYCEL 301 LD N+EP GY CP C KY +L Sbjct: 113 LDKNSEPN----GYMCPICLTKYTQL 134 >5OQM-W nrPDB Length = 541 Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Query: 276 LDGNTEPGLTLGGYFCPQCRAKYCEL 301 LD N+EP GY CP C KY +L Sbjct: 113 LDKNSEPN----GYMCPICLTKYTQL 134 >5FZ5-W nrPDB Length = 482 Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 4/26 (15%) Query: 276 LDGNTEPGLTLGGYFCPQCRAKYCEL 301 LD N+EP GY CP C KY +L Sbjct: 113 LDKNSEPN----GYMCPICLTKYTQL 134 >4CFG-A nrPDB Length = 630 Score = 29.6 bits (65), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/80 (30%), Positives = 26/80 (32%) Query: 289 YFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGC 348 Y CPQCRA Y P K L V L P D + C Sbjct: 48 YLCPQCRAVYQARPQLHKNTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQVAC 107 Query: 349 QGELKDQHVYVCAVCQNVFC 368 LK+ V C VC FC Sbjct: 108 DHCLKEAAVKTCLVCMASFC 127 >4ZQU-A nrPDB Length = 124 Score = 28.1 bits (61), Expect = 7.1, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 11/106 (10%) Query: 94 EYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAM 153 +YFD+ + ++ KS + + +LS NP + +S+KK +D+T E + + +++ Sbjct: 25 DYFDR---ATGAVVSAKSLDTQTMAKLS-NPNQVYSSIKKNIDVTAKFEKASLSGVTVNS 80 Query: 154 QTLKHMPGHTSREV-LIIFSSLTTCDPSNIYDLIKTLKAAKIRVSV 198 + TS+EV L + + T + I I+ K ++V+V Sbjct: 81 SMI------TSKEVRLAVPVNTTKAQWTEINRAIEYGKNQGVKVTV 120 >3BPQ-B nrPDB Length = 88 Score = 27.7 bits (60), Expect = 9.5, Method: Composition-based stats. Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 153 MQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDL-IKTLKA----AKIRVSVIGLSAEVRV 207 ++ LKH+PGH + + +I + N L IK +K +IRV + EV Sbjct: 10 VKDLKHVPGHIRKRIKLIIEECQNSNSLNDLKLDIKKIKGYHNYYRIRVGNYSIGIEVNG 69 Query: 208 CTVLAR 213 T++ R Sbjct: 70 DTIIFR 75 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5OF4-E nrPDB 639 0.0 6NMI-E nrPDB 478 e-135 5OQJ-6 nrPDB 475 e-134 2X5N-A nrPDB 186 2e-47 5NUS-B nrPDB 117 8e-27 5OBZ-B nrPDB 70 2e-12 Sequences not found previously or not previously below threshold: 6FVX-W nrPDB 107 7e-24 5A5B-W nrPDB 107 7e-24 6MSK-b nrPDB 107 1e-23 4CFG-A nrPDB 34 0.16 5AY7-A nrPDB 31 1.1 3LNP-A nrPDB 30 1.6 5F1Q-A nrPDB 30 2.6 4CRM-X nrPDB 28 6.7 3E20-C nrPDB 28 7.4 4PZ0-A nrPDB 28 8.6 5VEU-A nrPDB 28 8.9 1JSW-A nrPDB 28 9.5 4KBL-A nrPDB 28 9.7 >5OF4-E nrPDB Length = 395 Score = 639 bits (1647), Expect = 0.0, Method: Composition-based stats. Identities = 395/395 (100%), Positives = 395/395 (100%) Query: 1 MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH 60 MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH Sbjct: 1 MDEEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRH 60 Query: 61 LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL 120 LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL Sbjct: 61 LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL 120 Query: 121 SGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS 180 SGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS Sbjct: 121 SGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS 180 Query: 181 NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP 240 NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP Sbjct: 181 NIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLTHHVSPPP 240 Query: 241 ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE 300 ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE Sbjct: 241 ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCE 300 Query: 301 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC 360 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC Sbjct: 301 LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELKDQHVYVC 360 Query: 361 AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV 395 AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV Sbjct: 361 AVCQNVFCVDCDVFVHDSLHCCPGCIHKIPAPSGV 395 >6NMI-E nrPDB Length = 366 Score = 478 bits (1230), Expect = e-135, Method: Composition-based stats. Identities = 310/337 (91%), Positives = 310/337 (91%), Gaps = 6/337 (1%) Query: 51 GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK 110 GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK Sbjct: 36 GQVRLGMMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTK 95 Query: 111 SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLII 170 SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLII Sbjct: 96 SKRAEKLTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLII 155 Query: 171 FSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKE 230 FSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKE Sbjct: 156 FSSLTTCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKE 215 Query: 231 LLTHHVSPPPASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYF 290 LLTHHVSPPPASSSSECSLIRMGFPQHTI GGYF Sbjct: 216 LLTHHVSPPPASSSSECSLIRMGFPQHTIXXXXXX------XXXXXXXXXXXXXXXGGYF 269 Query: 291 CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQG 350 CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQG Sbjct: 270 CPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQG 329 Query: 351 ELKDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIH 387 ELKDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIH Sbjct: 330 ELKDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIH 366 >5OQJ-6 nrPDB Length = 461 Score = 475 bits (1222), Expect = e-134, Method: Composition-based stats. Identities = 136/393 (34%), Positives = 199/393 (50%), Gaps = 26/393 (6%) Query: 11 WEGGYERTWEILKEDESGSLKATIEDILFKAKRKRVFEHHGQVRLGMMRHLYVVVDGSRT 70 WE +R+W+++K D+ G + + + I+ K++ ++ + G++R L + +D S Sbjct: 76 WEDEIKRSWDLVKVDDEGDMASLVASIVEARKKRTAKKNITPYQRGIIRSLILTLDCSEA 135 Query: 71 MEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITS 130 M ++DL+PNR ++ FV E+FDQNPISQ+GII+ ++ A+ ++++SGNP+ HI + Sbjct: 136 MLEKDLRPNRHAMIIQYAIDFVHEFFDQNPISQMGIIIMRNGLAQLVSQVSGNPQDHIDA 195 Query: 131 LKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDLIKTLK 190 LK G PSL N+L +A L +P H +REVLI+F SL+T DP +I+ I +L Sbjct: 196 LKSIRKQEPKGNPSLQNALEMARGLLLPVPAHCTREVLIVFGSLSTTDPGDIHQTIDSLV 255 Query: 191 AAKIRVSVIGLSAEVRVCTVLARETG----GTYHVILDESHYKELLTHHVSPPPASSSSE 246 + KIRV V+GLSA+V +C L + T Y ++LDE+H KEL V+P Sbjct: 256 SEKIRVKVLGLSAQVAICKELCKATNYGDESFYKILLDETHLKELFNEAVTPXXXXXXXX 315 Query: 247 CSLIRMGFPQHTIASLSDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVECK 306 I + P+F H L GGYFCP C +K C LP C Sbjct: 316 XXXXXXXXXPTRIF-----EDTPTFCSCH------SKLVYGGYFCPNCHSKVCSLPTVCP 364 Query: 307 ICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGCQGELK-----------DQ 355 C L L+ F E+P E C+ CQ Sbjct: 365 CCDLMLILXXXXXXXXXXXXXXKTFAEVPTTEKFRSEDCFSCQSRFPXXXXXXXXXXXXX 424 Query: 356 HVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIHK 388 Y C C+ FCVDCDVF+H+ LH CPGC K Sbjct: 425 SRYRCEDCKQEFCVDCDVFIHEILHNCPGCESK 457 >2X5N-A nrPDB Length = 192 Score = 186 bits (472), Expect = 2e-47, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 59/144 (40%), Gaps = 4/144 (2%) Query: 57 MMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEK 116 ++ +++D S M + D P R + + + NP + G++ + Sbjct: 1 VLEATMILIDNSEWMINGDYIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSPQV 60 Query: 117 LTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLT 175 L+ L+ + K ++++ D+ G + + IA LKH R+ ++ F S Sbjct: 61 LSTLTRDYGKFLSAMH---DLPVRGNAKFGDGIQIAQLALKHRENKIQRQRIVAFVGSPI 117 Query: 176 TCDPSNIYDLIKTLKAAKIRVSVI 199 D N+ L K +K + + +I Sbjct: 118 VEDEKNLIRLAKRMKKNNVAIDII 141 >5NUS-B nrPDB Length = 113 Score = 117 bits (293), Expect = 8e-27, Method: Composition-based stats. Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 8/84 (9%) Query: 314 SAPHLARSYHHLFPLDAFQEIPLEEYNGER--FCYGC------QGELKDQHVYVCAVCQN 365 + HLARSYHHLFPL + E+ E + C+ C G + Y C C Sbjct: 1 LSTHLARSYHHLFPLKGWVEVSWAEARKSKQVGCFACLAPFPSNGNGSESGRYKCPTCGK 60 Query: 366 VFCVDCDVFVHDSLHCCPGCIHKI 389 FC+DCDVF H+ +H CPGC + Sbjct: 61 HFCIDCDVFAHEVIHNCPGCQADM 84 >6FVX-W nrPDB Length = 197 Score = 107 bits (268), Expect = 7e-24, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 5/159 (3%) Query: 57 MMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEK 116 ++ +V+D S + D R + +E+ + + NP + +G+I Sbjct: 2 VLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRV 61 Query: 117 LTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLT 175 L+ + K + L D G+ + +L IA TLKH + ++ F S Sbjct: 62 LSTFTAEFGKILAGLH---DTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPI 118 Query: 176 TCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARE 214 + + L KTLK + V +I E+ T L E Sbjct: 119 SDSRDELIRLAKTLKKNNVAVDIINF-GEIEQNTELLDE 156 >5A5B-W nrPDB Length = 268 Score = 107 bits (268), Expect = 7e-24, Method: Composition-based stats. Identities = 35/159 (22%), Positives = 62/159 (38%), Gaps = 5/159 (3%) Query: 57 MMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEK 116 ++ +V+D S + D R + +E+ + + NP + +G+I Sbjct: 2 VLEATVLVIDNSEYSRNGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANPRV 61 Query: 117 LTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLT 175 L+ + K + L D G+ + +L IA TLKH + ++ F S Sbjct: 62 LSTFTAEFGKILAGLH---DTQIEGKLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPI 118 Query: 176 TCDPSNIYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARE 214 + + L KTLK + V +I E+ T L E Sbjct: 119 SDSRDELIRLAKTLKKNNVAVDIINF-GEIEQNTELLDE 156 >6MSK-b nrPDB Length = 377 Score = 107 bits (266), Expect = 1e-23, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 5/149 (3%) Query: 57 MMRHLYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEK 116 ++ V VD S M + D P RL + NP + +G+I + E Sbjct: 2 VLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLAND-CEV 60 Query: 117 LTELSGNPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLT 175 LT L+ + + ++ L G+ + + +A LKH G + +I F S Sbjct: 61 LTTLTPDTGRILSKLHTV---QPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPV 117 Query: 176 TCDPSNIYDLIKTLKAAKIRVSVIGLSAE 204 + ++ L K LK K+ V +I E Sbjct: 118 EDNEKDLVKLAKRLKKEKVNVDIINFGEE 146 >5OBZ-B nrPDB Length = 167 Score = 70.1 bits (170), Expect = 2e-12, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%) Query: 353 KDQHVYVCAVCQNVFCVDCDVFVHDSLHCCPGCIHKI 389 + Y C C FC+DCDVF H+ +H CPGC + Sbjct: 102 SESGRYKCPTCGKHFCIDCDVFAHEVIHNCPGCQADM 138 Score = 54.7 bits (130), Expect = 7e-08, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%) Query: 314 SAPHLARSYHHLFPLDAFQEIPLEEYNGER--FCYGC 348 + HLARSYHHLFPL + E+ E + C+ C Sbjct: 1 LSTHLARSYHHLFPLKGWVEVSWAEARKSKQVGCFAC 37 >4CFG-A nrPDB Length = 630 Score = 33.5 bits (75), Expect = 0.16, Method: Composition-based stats. Identities = 24/80 (30%), Positives = 26/80 (32%) Query: 289 YFCPQCRAKYCELPVECKICGLTLVSAPHLARSYHHLFPLDAFQEIPLEEYNGERFCYGC 348 Y CPQCRA Y P K L V L P D + C Sbjct: 48 YLCPQCRAVYQARPQLHKNTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQVAC 107 Query: 349 QGELKDQHVYVCAVCQNVFC 368 LK+ V C VC FC Sbjct: 108 DHCLKEAAVKTCLVCMASFC 127 >5AY7-A nrPDB Length = 355 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 3/53 (5%) Query: 182 IYDLIKTLKAAKIRVSVIGLSAEVRVCTVLARETGG---TYHVILDESHYKEL 231 IY+L+K +K A + + IG+ A V +E Y ++D H EL Sbjct: 207 IYNLVKRMKDAGVPIDGIGMQAHYNVYGPTMKEVDDAIKLYSTVVDHIHLTEL 259 >3LNP-A nrPDB Length = 468 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 11/48 (22%), Positives = 21/48 (43%), Gaps = 1/48 (2%) Query: 93 EEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCH 140 + F+ +P+++ G++ +S P K IT L +DM Sbjct: 198 NDRFNNHPMNEQGLVQIGFG-PHAPYTVSDEPLKEITMLSDQLDMPVQ 244 >5F1Q-A nrPDB Length = 543 Score = 29.7 bits (65), Expect = 2.6, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 18/34 (52%) Query: 67 GSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNP 100 G + +++D KP R ++ F+ + D+NP Sbjct: 98 GVKWQDNKDFKPTRDFNADDVIYSFMRQKDDKNP 131 >4CRM-X nrPDB Length = 282 Score = 28.1 bits (61), Expect = 6.7, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 8/117 (6%) Query: 80 RLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG----NPRKHITSLKKAV 135 R K+ E V+ + + ++ G+I+ S A+ T+L+ +PR + V Sbjct: 56 RHNYVRKVAEVAVQNFITNDKVNVKGLILAGS--ADFKTDLAKSELFDPRLACKVI-SIV 112 Query: 136 DMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNI-YDLIKTLKA 191 D++ GE ++ ++ + L ++ +++L + + D Y + TLKA Sbjct: 113 DVSYGGENGFNQAIELSAEALANVKYVQEKKLLEAYFDEISQDTGKFCYGIDDTLKA 169 >3E20-C nrPDB Length = 441 Score = 28.1 bits (61), Expect = 7.4, Method: Composition-based stats. Identities = 20/104 (19%), Positives = 46/104 (44%), Gaps = 5/104 (4%) Query: 80 RLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSGN---PRKHITSLKKAVD 136 R K+ E V+ + + + GI++ S A+ TEL + ++ + + K VD Sbjct: 203 RHNYVRKVAEGAVQHFITDDKPNVAGIVLAGS--ADFKTELGQSDLFDQRLQSRIIKTVD 260 Query: 137 MTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPS 180 ++ G+ ++ +A TL ++ ++++ F + D Sbjct: 261 VSYGGDAGFNQAIELAADTLSNVKYVQEKKLIQRFFDEISLDSG 304 >4PZ0-A nrPDB Length = 324 Score = 27.7 bits (60), Expect = 8.6, Method: Composition-based stats. Identities = 16/108 (14%), Positives = 35/108 (32%), Gaps = 8/108 (7%) Query: 91 FVEEYFDQNPISQIGIIVTKSKRAEKLTELSGNPRKHITSLKKAVDMTCHGEP---SLYN 147 ++ + +QN + + + ++ L +K +T L D+ S Sbjct: 59 YINNFINQNYDALMVSSTSVDGLSQ---SLQRAKKKGMTVLTWDSDVNPKDRSFYISQGT 115 Query: 148 SLSIAMQTLKHMPGHTSREVLIIF--SSLTTCDPSNIYDLIKTLKAAK 193 +A ++ + + F SS T D + K + K Sbjct: 116 PDQLANLLIEMTSKQIGDKGKVAFFYSSPTVTDQNQWVTKAKEIIKEK 163 >5VEU-A nrPDB Length = 480 Score = 27.7 bits (60), Expect = 8.9, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 4/65 (6%) Query: 66 DGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIG----IIVTKSKRAEKLTELS 121 D E ++ +P R + ++ ++ F P + IG ++ K L S Sbjct: 383 DPKYWTEPEEFRPERFSKKKDSIDPYIYTPFGTGPRNCIGMRFALMNMKLALIRVLQNFS 442 Query: 122 GNPRK 126 P K Sbjct: 443 FKPCK 447 >1JSW-A nrPDB Length = 478 Score = 27.7 bits (60), Expect = 9.5, Method: Composition-based stats. Identities = 12/75 (16%), Positives = 25/75 (33%) Query: 126 KHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIFSSLTTCDPSNIYDL 185 K + ++ + + + L + L+ T + FS L + NI Sbjct: 162 KLVDAINQLREGFERKAVEFQDILKMGRTQLQDAVPMTLGQEFRAFSILLKEEVKNIQRT 221 Query: 186 IKTLKAAKIRVSVIG 200 + L + + IG Sbjct: 222 AELLLEVNLGATAIG 236 >4KBL-A nrPDB Length = 559 Score = 27.7 bits (60), Expect = 9.7, Method: Composition-based stats. Identities = 30/140 (21%), Positives = 48/140 (34%), Gaps = 23/140 (16%) Query: 263 SDQDAKPSFSMAHLDGNTEPGLTLGGYFCPQCRAKYCELPVE---------CKI--CGLT 311 S QD + + GL G FC QC ++Y + C C + Sbjct: 182 SAQDMPCQICYLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDIL 241 Query: 312 --------LVSAPHLARSYHHLFPLDAFQEIP-LEEYNGERFCYGC-QGELKDQHVYVCA 361 L++ + Y HL ++F E L ++ C+ + + D C Sbjct: 242 VDDNTVMRLITDSKVKLKYQHLIT-NSFVECNRLLKWCPAPDCHHVVKVQYPDAKPVRCK 300 Query: 362 VCQNVFCVDCDVFVHDSLHC 381 C FC +C HD + C Sbjct: 301 -CGRQFCFNCGENWHDPVKC 319 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.324 0.132 0.386 Lambda K H 0.267 0.0396 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,148,032 Number of Sequences: 36641 Number of extensions: 626054 Number of successful extensions: 1878 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 47 Number of HSP's that attempted gapping in prelim test: 1818 Number of HSP's gapped (non-prelim): 82 length of query: 395 length of database: 10,336,785 effective HSP length: 99 effective length of query: 296 effective length of database: 6,709,326 effective search space: 1985960496 effective search space used: 1985960496 T: 11 A: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.1 bits) S2: 60 (27.8 bits)