BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q13637 (225 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4CZ2-A nrPDB 421 e-118 6FF8-A nrPDB 370 e-103 5SZJ-A nrPDB 137 5e-33 5LPN-A nrPDB 133 5e-32 4LHX-A nrPDB 121 3e-28 5SZI-A nrPDB 121 3e-28 5LDD-C nrPDB 120 4e-28 2HUP-A nrPDB 120 4e-28 2IL1-A nrPDB 117 3e-27 5FBL-B nrPDB 115 2e-26 3RAB-A nrPDB 114 3e-26 6IF2-B nrPDB 114 4e-26 2F9L-A nrPDB 114 5e-26 1Z0F-A nrPDB 113 6e-26 2A5J-A nrPDB 113 6e-26 2RHD-A nrPDB 113 6e-26 3L0I-B nrPDB 113 6e-26 1ZBD-A nrPDB 112 9e-26 1Z0A-A nrPDB 112 1e-25 3BFK-A nrPDB 112 1e-25 2BMD-A nrPDB 112 1e-25 4PHF-A nrPDB 112 1e-25 3DZ8-A nrPDB 112 2e-25 5XR6-A nrPDB 111 2e-25 1YZN-A nrPDB 111 2e-25 3CUE-F nrPDB 110 4e-25 4UJ4-A nrPDB 110 6e-25 5SZH-B nrPDB 110 6e-25 2O52-A nrPDB 110 6e-25 4RKE-A nrPDB 110 6e-25 2GF9-A nrPDB 110 7e-25 2FFQ-A nrPDB 110 7e-25 6IYB-A nrPDB 109 1e-24 2WWX-A nrPDB 109 1e-24 4RKF-A nrPDB 109 1e-24 2GIL-A nrPDB 108 1e-24 2IEZ-A nrPDB 107 5e-24 5LEF-A nrPDB 106 6e-24 3TSO-A nrPDB 106 7e-24 6HUF-A nrPDB 105 2e-23 4QXA-A nrPDB 105 2e-23 3CPJ-B nrPDB 105 2e-23 5UB8-A nrPDB 105 2e-23 1Z22-A nrPDB 104 2e-23 1WMS-A nrPDB 103 4e-23 2F7S-A nrPDB 103 5e-23 2EW1-A nrPDB 103 7e-23 2OCB-A nrPDB 103 8e-23 2IEY-A nrPDB 102 2e-22 3CPH-A nrPDB 101 3e-22 2G77-B nrPDB 100 3e-22 3RWM-B nrPDB 100 5e-22 1X3S-A nrPDB 100 6e-22 1D5C-A nrPDB 100 6e-22 2OCY-C nrPDB 99 2e-21 2G6B-A nrPDB 98 3e-21 1Z06-A nrPDB 97 4e-21 1YZU-A nrPDB 97 5e-21 3BC1-A nrPDB 96 2e-20 5XC3-A nrPDB 95 2e-20 5YOZ-A nrPDB 95 3e-20 6O62-A nrPDB 94 3e-20 4FMC-F nrPDB 94 4e-20 2P5S-A nrPDB 94 4e-20 2FG5-A nrPDB 94 5e-20 4G01-B nrPDB 92 2e-19 2N1B-A nrPDB 90 6e-19 5UWI-A nrPDB 90 7e-19 5CLL-A nrPDB 89 1e-18 1EK0-A nrPDB 89 1e-18 1YVD-A nrPDB 89 2e-18 3E5H-A nrPDB 87 8e-18 4KYI-B nrPDB 87 8e-18 1TU4-A nrPDB 86 9e-18 2HEI-A nrPDB 86 2e-17 4DJT-A nrPDB 85 3e-17 3WYF-A nrPDB 84 5e-17 5XOJ-A nrPDB 84 6e-17 4M8N-E nrPDB 77 5e-15 4DXA-A nrPDB 77 7e-15 3CLV-A nrPDB 77 7e-15 5CM8-B nrPDB 72 2e-13 4KU4-A nrPDB 72 2e-13 2ERX-A nrPDB 66 1e-11 1GWN-A nrPDB 63 1e-10 1M7B-A nrPDB 62 2e-10 2FN4-A nrPDB 62 2e-10 2J0V-A nrPDB 60 1e-09 2ERY-A nrPDB 59 1e-09 5WDQ-A nrPDB 59 2e-09 3REG-A nrPDB 58 3e-09 2REX-B nrPDB 57 7e-09 2J1L-A nrPDB 57 8e-09 5WDR-A nrPDB 56 9e-09 2Q3H-A nrPDB 56 1e-08 2WBL-C nrPDB 56 1e-08 1ZC4-A nrPDB 56 1e-08 2YC4-C nrPDB 55 2e-08 2W2X-A nrPDB 55 2e-08 3TH5-A nrPDB 55 3e-08 2KE5-A nrPDB 55 3e-08 2ATX-A nrPDB 54 4e-08 3CON-A nrPDB 54 4e-08 5UHV-A nrPDB 54 5e-08 2NTY-C nrPDB 53 9e-08 3BWD-D nrPDB 53 9e-08 4MIT-A nrPDB 53 1e-07 2WKQ-A nrPDB 53 1e-07 5VCU-A nrPDB 52 1e-07 3RYT-C nrPDB 52 2e-07 3A58-B nrPDB 52 2e-07 4WA7-A nrPDB 51 4e-07 1RYH-A nrPDB 51 4e-07 5ZHX-e nrPDB 50 5e-07 3OES-A nrPDB 50 6e-07 3PIR-A nrPDB 50 6e-07 5C2K-A nrPDB 50 8e-07 3RAP-R nrPDB 50 8e-07 2ATV-A nrPDB 50 9e-07 5ZVP-A nrPDB 49 1e-06 2GF0-A nrPDB 49 2e-06 4U5X-A nrPDB 49 2e-06 3VHL-B nrPDB 49 2e-06 3T5G-A nrPDB 48 4e-06 2FV8-A nrPDB 48 4e-06 5JCP-B nrPDB 47 5e-06 4WNR-A nrPDB 45 2e-05 2H57-A nrPDB 44 5e-05 3D6T-B nrPDB 43 9e-05 2AL7-A nrPDB 43 1e-04 4ILE-A nrPDB 42 3e-04 5C1S-A nrPDB 41 4e-04 4BAS-A nrPDB 40 0.001 2H16-A nrPDB 39 0.001 3DPU-A nrPDB 39 0.002 2G3Y-A nrPDB 38 0.003 5EE5-B nrPDB 38 0.004 1MOZ-A nrPDB 37 0.006 2CJW-A nrPDB 37 0.006 5HZH-A nrPDB 37 0.007 6HLU-A nrPDB 37 0.008 3LVQ-E nrPDB 37 0.010 5NZV-F nrPDB 36 0.012 4ZI3-A nrPDB 35 0.027 1KSG-A nrPDB 35 0.037 4C0K-A nrPDB 34 0.040 5DE3-A nrPDB 34 0.045 2A5F-A nrPDB 33 0.091 2NZJ-A nrPDB 33 0.10 6CY1-A nrPDB 33 0.11 4V0N-A nrPDB 33 0.12 3CBQ-A nrPDB 32 0.15 6BBQ-A nrPDB 32 0.29 3IHW-A nrPDB 31 0.36 3Q85-A nrPDB 31 0.41 5UF8-A nrPDB 31 0.48 3O47-A nrPDB 30 0.57 3BH6-A nrPDB 30 0.58 6BPM-C nrPDB 30 0.60 6D4G-A nrPDB 30 0.76 1YZG-A nrPDB 30 0.77 4YLG-A nrPDB 30 0.89 6FAE-B nrPDB 30 0.92 1YE8-A nrPDB 30 1.0 3LRP-A nrPDB 30 1.1 3C5H-A nrPDB 30 1.2 2BDW-A nrPDB 29 1.2 3AQ4-A nrPDB 29 1.2 5FG8-A nrPDB 29 1.6 3KK8-A nrPDB 29 1.7 2R5V-A nrPDB 29 1.7 4KV9-A nrPDB 29 1.9 2B6H-A nrPDB 28 2.2 5KZQ-A nrPDB 28 2.2 1Z6X-A nrPDB 28 2.3 4CMR-A nrPDB 28 3.2 5KSO-A nrPDB 28 3.3 5KU1-A nrPDB 28 3.7 1M2O-B nrPDB 28 3.8 6GNI-B nrPDB 28 3.9 6FOC-A nrPDB 28 3.9 6FHW-A nrPDB 27 4.9 4R0L-C nrPDB 27 5.7 4DKN-A nrPDB 27 6.2 6DFF-C nrPDB 27 6.7 6FA9-A nrPDB 27 6.8 6CES-A nrPDB 27 7.4 2WAN-A nrPDB 27 8.1 1J2J-A nrPDB 27 8.1 5IRR-A nrPDB 27 8.4 >4CZ2-A nrPDB Length = 230 Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust. Identities = 201/206 (97%), Positives = 204/206 (99%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WDIAG ERFGNMTRVYYKEA+GAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSF 199 LLANKCDQNKDSS SPSQ+DQFCKEHGFAGWFETSAKDNINIEEAARFLVEK+LVNHQSF Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSF 204 Query: 200 PNEENDVDKIKLDQETLRAENKSQCC 225 PNEENDVDKIKLDQETLRAENKSQCC Sbjct: 205 PNEENDVDKIKLDQETLRAENKSQCC 230 >6FF8-A nrPDB Length = 181 Score = 370 bits (949), Expect = e-103, Method: Compositional matrix adjust. Identities = 178/179 (99%), Positives = 178/179 (99%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL Sbjct: 3 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 62 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WDIAG ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV Sbjct: 63 WDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 122 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS Sbjct: 123 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 181 >5SZJ-A nrPDB Length = 202 Score = 137 bits (344), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 76/208 (36%), Positives = 120/208 (57%), Gaps = 9/208 (4%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 A +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++L Sbjct: 4 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKL 62 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 Q+WD AGQERF +T YY+ A+G +V+DI+ +FE + KW ++D + + Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVE 118 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 +LL NKCD + + +Q +EHG +FETSAK NINIE+A L E IL + Sbjct: 119 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL---R 174 Query: 198 SFPNEENDVDKIKLDQETLRAENKSQCC 225 P +E + + + + KS+CC Sbjct: 175 KTPVKEPNSENVDISSGGGVTGWKSKCC 202 >5LPN-A nrPDB Length = 177 Score = 133 bits (335), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 70/176 (39%), Positives = 107/176 (60%), Gaps = 6/176 (3%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 A +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++L Sbjct: 4 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKL 62 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 Q+WD AGQERF +T YY+ A+G +V+DI+ +FE + KW ++D + + Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHAN----EDVE 118 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +LL NKCD + + +Q +EHG +FETSAK NINIE+A L E IL Sbjct: 119 RMLLGNKCDMDDKRVVPKGKGEQIAREHGIR-FFETSAKANINIEKAFLTLAEDIL 173 >4LHX-A nrPDB Length = 186 Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 101/166 (60%), Gaps = 6/166 (3%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 +T ++LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF ++ + D + ++LQ Sbjct: 4 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKR-IKLQ 62 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF +T YY+ A+G +V+DI+ +F+ + W +++ + + Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA----SADVEK 118 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 ++L NKCD N S + ++ ++G + ETSAK NIN+E A Sbjct: 119 MILGNKCDVNDKRQVSKERGEKLALDYGIK-FMETSAKANINVENA 163 >5SZI-A nrPDB Length = 209 Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust. Identities = 58/166 (34%), Positives = 101/166 (60%), Gaps = 6/166 (3%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 +T ++LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF ++ + D + ++LQ Sbjct: 4 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKR-IKLQ 62 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF +T YY+ A+G +V+DI+ +F+ + W +++ + + Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA----SADVEK 118 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 ++L NKCD N S + ++ ++G + ETSAK NIN+E A Sbjct: 119 MILGNKCDVNDKRQVSKERGEKLALDYGIK-FMETSAKANINVENA 163 >5LDD-C nrPDB Length = 207 Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 68/196 (34%), Positives = 112/196 (57%), Gaps = 4/196 (2%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF + + D R V +QLWD Sbjct: 7 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQ-VTMQLWD 65 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQERF ++ +Y+ A +VFD++ + +F+A+ W+ + + + P V+L Sbjct: 66 TAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVL 125 Query: 142 ANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS-- 198 K D + S + FC+ G +FETSAK+ IN+EEA + + L+ +S Sbjct: 126 GIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEESEE 185 Query: 199 FPNEENDVDKIKLDQE 214 F + D I ++ E Sbjct: 186 FSGDFQDPINIHIENE 201 >2HUP-A nrPDB Length = 201 Score = 120 bits (301), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 68/192 (35%), Positives = 109/192 (56%), Gaps = 14/192 (7%) Query: 5 GAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL 64 G+GDP E + LFK++++G+ VGKT +++R+ FS+ +TIGVDF + Sbjct: 18 GSGDP---------DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTM 68 Query: 65 KVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDL 124 K L + V+LQ+WD AGQERF +T+ YY+ A GA + +DI++ S+F +V W D Sbjct: 69 KTLEIQGKR-VKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIED- 126 Query: 125 DSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 V GS I +L+ NK D ++ S ++ + + ETSAKD+ N+EEA Sbjct: 127 ---VRKYAGSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEA 183 Query: 185 ARFLVEKILVNH 196 + ++++ H Sbjct: 184 FLRVATELIMRH 195 >2IL1-A nrPDB Length = 192 Score = 117 bits (294), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 7/184 (3%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 GL +P P + +V++IG GVGKTS+++R+ F + ++T+GVDF +K + Sbjct: 13 GLVPRGSPRPA--DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVEL 70 Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 + +RLQ+WD AGQERF ++T YY+ A G +V+DI++ TF+ + KW +D Sbjct: 71 RGKK-IRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYAS 129 Query: 130 LPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLV 189 +L+ NK D D + Q ++F ++ + E SAKDN N++E LV Sbjct: 130 ----EDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLV 185 Query: 190 EKIL 193 + IL Sbjct: 186 DDIL 189 >5FBL-B nrPDB Length = 221 Score = 115 bits (288), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 64/187 (34%), Positives = 111/187 (59%), Gaps = 9/187 (4%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFKV++IG+ GVGK++++ R+ F+ ++TIGV+FA + + D +T ++ Q+WD Sbjct: 14 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDT 72 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ AVGA +V+DI++ T+E V +W +L S I +L+ Sbjct: 73 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVG 128 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFL---VEKILVNHQSF 199 NK D + + F +++G + + ETSA D+ N+E A + + + +I+ Q Sbjct: 129 NKSDLRHLRAVPTDEARAFAEKNGLS-FIETSALDSTNVEAAFQTILTEIYRIVSQKQMS 187 Query: 200 PNEENDV 206 END+ Sbjct: 188 DRRENDM 194 >3RAB-A nrPDB Length = 169 Score = 114 bits (286), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 102/170 (60%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + + ++LQ+WD Sbjct: 3 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKR-IKLQIWDT 61 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ A+G +++DI+ +F AV W + + K + + + + +L+ Sbjct: 62 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 117 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NKCD + S + Q GF +FE SAKDNIN+++ LV+ I Sbjct: 118 NKCDMEDERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVI 166 >6IF2-B nrPDB Length = 186 Score = 114 bits (285), Expect = 4e-26, Method: Compositional matrix adjust. Identities = 61/171 (35%), Positives = 97/171 (56%), Gaps = 7/171 (4%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 +HLFK+L+IG+ GVGK+S++ R+ FS Y TIGVDF ++ + + V+LQ+WD Sbjct: 12 DHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEK-VKLQIWDT 70 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG ERF +T YY+ G VV+D++ + +F V +W +++ N + +L+ Sbjct: 71 AGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ-----NCDDVCRILVG 125 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 NK D + +F + G FETSAK+N+N+EE + E +L Sbjct: 126 NKNDDPERKVVETEDAYKFAGQMGIQ-LFETSAKENVNVEEMFNCITELVL 175 >2F9L-A nrPDB Length = 199 Score = 114 bits (284), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 105/170 (61%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFKV++IG+ GVGK++++ R+ F+ ++TIGV+FA + + D +T ++ Q+WD Sbjct: 3 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDT 61 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ AVGA +V+DI++ T+E V +W +L S I +L+ Sbjct: 62 AGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHA----DSNIVIMLVG 117 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NK D + + F +++ + + ETSA D+ N+EEA + ++ +I Sbjct: 118 NKSDLRHLRAVPTDEARAFAEKNNLS-FIETSALDSTNVEEAFKNILTEI 166 >1Z0F-A nrPDB Length = 179 Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 62/182 (34%), Positives = 104/182 (57%), Gaps = 6/182 (3%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 +A AP ++FK ++IG++GVGK+ ++ ++ + F TIGV+F +++ + Sbjct: 4 GSATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 63 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 ++LQ+WD AGQERF +TR YY+ A GA +V+DI+R ST+ + W +D +L N Sbjct: 64 -IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDAR---NLTNP 119 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 + + +L+ NK D + + QF +E+G + E SAK N+E+A +KI Sbjct: 120 NTV-IILIGNKADLEAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKIY 177 Query: 194 VN 195 N Sbjct: 178 QN 179 >2A5J-A nrPDB Length = 191 Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 60/161 (37%), Positives = 97/161 (60%), Gaps = 6/161 (3%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 +LFK ++IG+ GVGK+ ++ ++ + F + TIGV+F +++N D + ++LQ+WD A Sbjct: 20 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQ-IKLQIWDTA 78 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 GQE F ++TR YY+ A GA +V+DI+R TF + W D++ H + S + +L+ N Sbjct: 79 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLE--DARQH--SSSNMVIMLIGN 134 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 K D + + F +EHG + ETSAK N+EEA Sbjct: 135 KSDLESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEA 174 >2RHD-A nrPDB Length = 175 Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/166 (35%), Positives = 103/166 (62%), Gaps = 7/166 (4%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 PE ++LFK+L+IG+ GVGK+ ++ R+ ++ Y +TIGVDF ++ ++ +++T V+LQ Sbjct: 4 PEY-DYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKT-VKLQ 61 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF +T YY+ A G +V+D++ +F+ V +W ++D + + N + Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEID-RYAMEN---VNK 117 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 +L+ NKCD + + + HG + ETSAK+ N+E+A Sbjct: 118 LLVGNKCDLVSKRVVTSDEGRELADSHGIK-FIETSAKNAYNVEQA 162 >3L0I-B nrPDB Length = 199 Score = 113 bits (283), Expect = 6e-26, Method: Compositional matrix adjust. Identities = 59/174 (33%), Positives = 100/174 (57%), Gaps = 7/174 (4%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 PE ++LFK+L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ Sbjct: 28 PE-YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQ 85 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF +T YY+ A G VV+D++ +F V +W ++D + Sbjct: 86 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNK 141 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NKCD + +F G + ETSAK+ N+E++ + +I Sbjct: 142 LLVGNKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 194 >1ZBD-A nrPDB Length = 203 Score = 112 bits (281), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 101/170 (59%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + + ++LQ+WD Sbjct: 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKR-IKLQIWDT 64 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG ER+ +T YY+ A+G +++DI+ +F AV W + + K + + + + +L+ Sbjct: 65 AGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI--KTYSWDNAQV--LLVG 120 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NKCD + S + Q GF +FE SAKDNIN+++ LV+ I Sbjct: 121 NKCDMEDERVVSSERGRQLADHLGFE-FFEASAKDNINVKQTFERLVDVI 169 >1Z0A-A nrPDB Length = 174 Score = 112 bits (281), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 6/169 (3%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 P +LFK ++IG+ GVGK+ ++ ++ + F + TIGV+F +++ D + + Sbjct: 1 GPLGSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQ-I 59 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 +LQ+WD AGQE F ++TR YY+ A GA +V+DI+R TF + W D++ H + S Sbjct: 60 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLE--DARQH--SNSN 115 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 + +L+ NK D + + F +EHG + ETSAK N+EEA Sbjct: 116 MVIMLIGNKSDLESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEA 163 >3BFK-A nrPDB Length = 181 Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 102/170 (60%), Gaps = 5/170 (2%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA K + + +++ Q+WD Sbjct: 5 DYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWDT 64 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ AVGA +V+DI++ ++FE + KW +L S I +L+ Sbjct: 65 AGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNAD----SNIVILLVG 120 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NK D + + Q+ K+ A + ETSA + N+E A L+ +I Sbjct: 121 NKSDLKHLRVINDNDATQYAKKEKLA-FIETSALEATNVELAFHQLLNEI 169 >2BMD-A nrPDB Length = 186 Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 6/175 (3%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 ET + LFK LVIG G GK+ ++ +++ + F TIGV+F K++N + V+LQ Sbjct: 4 SETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK-YVKLQ 62 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF ++TR YY+ A GA +V+DI+ T+ A+ W +D + I Sbjct: 63 IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD----ARMLASQNIVI 118 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +L NK D + D + + +F +E+ + ETSA N+EEA KIL Sbjct: 119 ILCGNKKDLDADREVTFLEASRFAQENELM-FLETSALTGENVEEAFVQCARKIL 172 >4PHF-A nrPDB Length = 184 Score = 112 bits (280), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 1/178 (0%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++++ KV+++G+ GVGKTS++ RYV+ +S Y+ATIG DF K + D + +Q+WD Sbjct: 7 KKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVATMQVWD 66 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQERF ++ +Y+ A +V+D++ +S+FE + W+ + ++ + P V+L Sbjct: 67 TAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVIL 126 Query: 142 ANKCDQNKDSS-QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 NK D + S + K G F TSAK+ IN++ A + L +Q+ Sbjct: 127 GNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA 184 >3DZ8-A nrPDB Length = 191 Score = 112 bits (279), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 102/170 (60%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + V+LQ+WD Sbjct: 21 DYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQIWDT 79 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ A+G +++DI+ +F AV W + + K + + + + +L+ Sbjct: 80 AGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI--KTYSWDNAQV--ILVG 135 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NKCD ++ P++ Q E +FE SAK+NI++ +A LV+ I Sbjct: 136 NKCDMEEERV-VPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAI 184 >5XR6-A nrPDB Length = 194 Score = 111 bits (278), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/162 (35%), Positives = 96/162 (59%), Gaps = 6/162 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA K + + +V+ Q+WD Sbjct: 23 DYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK-VVKAQIWDT 81 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ AVGA +++D++R +TFE +W +L PN I +L+ Sbjct: 82 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTD-PN---IVVMLIG 137 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 NKCD + + F + + ETSA D N+E A Sbjct: 138 NKCDLRHLVAVKTEEAKAFAERESLY-FMETSALDATNVENA 178 >1YZN-A nrPDB Length = 185 Score = 111 bits (277), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 61/180 (33%), Positives = 99/180 (55%), Gaps = 6/180 (3%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 + P ++LFK+L+IG GVGK+ ++ R+ ++ Y +TIGVDF +K + D + Sbjct: 9 GSLVPRGSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK 68 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 T V+LQ+WD AGQERF +T YY+ + G +V+D++ +F V W ++D Sbjct: 69 T-VKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT--- 124 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 S + +L+ NKCD KD V + + + ETSA D+ N+E+A + +I Sbjct: 125 -STVLKLLVGNKCDL-KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 182 >3CUE-F nrPDB Length = 206 Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust. Identities = 60/170 (35%), Positives = 97/170 (57%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFK+L+IG GVGK+ ++ R+ ++ Y +TIGVDF +K + D +T V+LQ+WD Sbjct: 6 DYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKT-VKLQIWDT 64 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF +T YY+ + G +V+D++ +F V W ++D S + +L+ Sbjct: 65 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT----STVLKLLVG 120 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NKCD KD V + + + ETSA D+ N+E+A + +I Sbjct: 121 NKCDL-KDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169 >4UJ4-A nrPDB Length = 185 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 59/170 (34%), Positives = 104/170 (61%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFKV++IG+ GVGK++++ R+ F+ ++TIGV+FA + + D +T ++ Q+WD Sbjct: 8 DYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWDT 66 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG ER+ +T YY+ AVGA +V+DI++ T+E V +W +L S I +L+ Sbjct: 67 AGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVG 122 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NK D + + F +++G + + ETSA D+ N+E A + ++ +I Sbjct: 123 NKSDLRHLRAVPTDEARAFAEKNGLS-FIETSALDSTNVEAAFQTILTEI 171 >5SZH-B nrPDB Length = 203 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 56/170 (32%), Positives = 97/170 (57%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFK+L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ+WD Sbjct: 8 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQIWDT 66 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF +T YY+ A G VV+D++ ++ V +W ++D + +L+ Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVG 122 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NK D + +F G + ETSAK+ N+E+A + +I Sbjct: 123 NKSDLTTKKVVDNTTAKEFADSLGIP-FLETSAKNATNVEQAFMTMAAEI 171 >2O52-A nrPDB Length = 200 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 65/174 (37%), Positives = 102/174 (58%), Gaps = 10/174 (5%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + LFK LVIG G GK+ ++ +++ F Q TIGV+F +V+N +T V+LQ+WD Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKT-VKLQIWDT 81 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF ++TR YY+ A GA +V+DI+ T+ ++ W +D + + PN I +L Sbjct: 82 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDART-LASPN---IVVILCG 137 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA----ARFLVEKI 192 NK D + + + + +F +E+ + ETSA N+EEA AR ++ KI Sbjct: 138 NKKDLDPEREVTFLEASRFAQENELM-FLETSALTGENVEEAFLKCARTILNKI 190 >4RKE-A nrPDB Length = 176 Score = 110 bits (274), Expect = 6e-25, Method: Compositional matrix adjust. Identities = 61/173 (35%), Positives = 102/173 (58%), Gaps = 10/173 (5%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 +LFK ++IG+ GVGK+ ++ ++ + F + TIGV+F +++ D + ++LQ+WD A Sbjct: 9 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQ-IKLQIWDTA 67 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 G E F ++TR YY+ A GA +V+DI+R TF + W D++ H + S + +L+ N Sbjct: 68 GLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLE--DARQH--SNSNMVIMLIGN 123 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA----ARFLVEKI 192 K D + + + F +EHG + ETSA+ N+EEA A+ + EKI Sbjct: 124 KSDLDSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTAKEIYEKI 175 >2GF9-A nrPDB Length = 189 Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 61/176 (34%), Positives = 102/176 (57%), Gaps = 8/176 (4%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALK-VLNWDSRTLVR 76 P +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K V D R ++ Sbjct: 15 VPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR--IK 72 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 LQ+WD AGQER+ +T YY+ A+G +++DI+ +F AV W + + K + + + + Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI--KTYSWDNAQV 130 Query: 137 PAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NKCD + + + GF +FE SAK+NIN+++ LV+ I Sbjct: 131 --ILVGNKCDLEDERVVPAEDGRRLADDLGFE-FFEASAKENINVKQVFERLVDVI 183 >2FFQ-A nrPDB Length = 171 Score = 110 bits (274), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 63/168 (37%), Positives = 96/168 (57%), Gaps = 6/168 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++ +GE VGKTS+I R+++ F Y+ATIG+DF K + + RT VRLQLWD AGQ Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQ 61 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ ++F+ KW D V GS + +L+ NK Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDD----VRTERGSDVIIMLVGNKT 117 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D + + +Q KE + ETSAK N+++ R + +L Sbjct: 118 DLADKRQITIEEGEQRAKELSVM-FIETSAKTGYNVKQLFRRVASALL 164 >6IYB-A nrPDB Length = 199 Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/201 (33%), Positives = 111/201 (55%), Gaps = 5/201 (2%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 +A + ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + D R Sbjct: 2 SAMGSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR- 60 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 LV +Q+WD AG ERF + +Y+ A +VFD++ +TF+ + W+ + + + Sbjct: 61 LVTMQIWDTAGLERFQSGV-AFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 119 Query: 134 SPIPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 P V+L NK D +N+ + +Q +C +FETSAK+ IN+E+A + + Sbjct: 120 ENFPFVVLGNKIDLENRQVATKRAQA--WCYSKNNIPYFETSAKEAINVEQAFQTIARNA 177 Query: 193 LVNHQSFPNEENDVDKIKLDQ 213 L + IKLD+ Sbjct: 178 LKQETEVELYNEFPEPIKLDK 198 >2WWX-A nrPDB Length = 175 Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 99/174 (56%), Gaps = 7/174 (4%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 PE ++LFK+L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ Sbjct: 3 PE-YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQ 60 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF +T YY+ A G VV+D++ +F V +W ++D + Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA----SENVNK 116 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ KCD + +F G + ETSAK+ N+E++ + +I Sbjct: 117 LLVGIKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 169 >4RKF-A nrPDB Length = 190 Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 12/193 (6%) Query: 1 MAGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV 60 MA GG DP AA + +++FK+L+IG VGKTS + RY F+ + +T+G+ Sbjct: 3 MASGG--DPKWQKDAAD--QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGI 58 Query: 61 DFALK-VLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLK 119 DF +K V D R V+LQ+WD AG ER+ +T YY+ A+G +++D++ +F +V Sbjct: 59 DFKVKTVFRHDKR--VKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQD 116 Query: 120 WKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI 179 W + + K + + + + +L+ NKCD S + Q + G +FETSAK+N+ Sbjct: 117 WVTQI--KTYSWDNAQV--ILVGNKCDMEDQRVISFERGRQLADQLG-VEFFETSAKENV 171 Query: 180 NIEEAARFLVEKI 192 N++ LV+ I Sbjct: 172 NVKAVFERLVDII 184 >2GIL-A nrPDB Length = 162 Score = 108 bits (271), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 62/161 (38%), Positives = 93/161 (57%), Gaps = 6/161 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++ +GE VGKTS+I R+++ F Y+ATIG+DF K + + RT VRLQLWD AGQ Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQ 60 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ ++F+ KW D V GS + +L+ NK Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDD----VRTERGSDVIIMLVGNKT 116 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAAR 186 D S + ++ KE + ETSAK N+++ R Sbjct: 117 DLADKRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFR 156 >2IEZ-A nrPDB Length = 220 Score = 107 bits (266), Expect = 5e-24, Method: Compositional matrix adjust. Identities = 67/217 (30%), Positives = 111/217 (51%), Gaps = 20/217 (9%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL-------- 74 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + +D++ Sbjct: 9 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAF 68 Query: 75 -VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 V LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 69 KVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 128 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 VL+ NK D + Q + +++G +FETSA N+E++ L++ I+ Sbjct: 129 D---IVLIGNKADLPDQREVNERQARELAEKYGIP-YFETSAATGQNVEKSVETLLDLIM 184 Query: 194 ------VNHQSFPNEENDVDKIKLDQETLRAENKSQC 224 V P+ N + KLD E AE K C Sbjct: 185 KRMEKCVEKTQVPDTVNGGNSGKLDGEK-PAEKKCAC 220 >5LEF-A nrPDB Length = 191 Score = 106 bits (265), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 6/188 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++ +GE VGKTS+I R+++ F Y+ATIG+DF K + + RT VRLQLWD AG Sbjct: 10 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGL 68 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ ++F+ KW D V GS + +L+ NK Sbjct: 69 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDD----VRTERGSDVIIMLVGNKT 124 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNEEND 205 D S + ++ KE + ETSAK N+++ R + + + D Sbjct: 125 DLADKRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAALPGMESTQDRSRED 183 Query: 206 VDKIKLDQ 213 + IKL++ Sbjct: 184 MIDIKLEK 191 >3TSO-A nrPDB Length = 178 Score = 106 bits (265), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 97/169 (57%), Gaps = 6/169 (3%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 +FKV++IGE GVGKT+++ R+ FS R TIGV+F+ + + + V+ Q+WD AG Sbjct: 10 VFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVMLGTAA-VKAQIWDTAG 68 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 ER+ +T YY+ AVGA +VFD+++ T+ V +W +L + I +L+ NK Sbjct: 69 LERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAE----ATIVVMLVGNK 124 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D ++ + F + +G + ETSA D+ N+E A ++++I Sbjct: 125 SDLSQAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIF 172 >6HUF-A nrPDB Length = 182 Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/171 (33%), Positives = 99/171 (57%), Gaps = 5/171 (2%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++L K L +G+ GVGKTS++ +Y F+ + T+G+DF K + + + ++LQLWD Sbjct: 7 DYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKR-IKLQLWDT 65 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG ERF ++T ++++A+G ++FD++ +F V W S L K H + +P VL Sbjct: 66 AGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQL--KTHAYSENP-DIVLCG 122 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 NK D + + ++ Q + +G +FETSA + NI +A L++ I+ Sbjct: 123 NKSDLEDERVVAAAEARQLAEHYGIP-YFETSAANGTNISQAIEMLLDLIM 172 >4QXA-A nrPDB Length = 208 Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/172 (34%), Positives = 93/172 (54%), Gaps = 2/172 (1%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 + LFK++++G+ GVGK+S++ RYV F TIGV+F K L D V +Q+WD Sbjct: 5 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGH-FVTMQIWD 63 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AG ERF ++ +Y+ + + F + S +F+ + WK + + P V+L Sbjct: 64 TAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVIL 123 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 NK D K+ S + +CK++G +FETSAKD+ N+ A V +IL Sbjct: 124 GNKTDI-KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRIL 174 >3CPJ-B nrPDB Length = 223 Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 57/168 (33%), Positives = 98/168 (58%), Gaps = 6/168 (3%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA + L + + ++ Q+WD AG Sbjct: 13 LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKR-IKAQIWDTAG 71 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 QER+ +T YY+ AVGA +V+DIS+SS++E W S+L + L+ NK Sbjct: 72 QERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD----DNVAVGLIGNK 127 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + + F +E+ + ETSA ++ N+++A L+ I Sbjct: 128 SDLAHLRAVPTEESKTFAQENQLL-FTETSALNSENVDKAFEELINTI 174 >5UB8-A nrPDB Length = 222 Score = 105 bits (261), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 58/170 (34%), Positives = 102/170 (60%), Gaps = 6/170 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 E+L+K+++IG+ GVGK++++ R+ F+ R+TIGV+FA + L D + V+ Q+WD Sbjct: 13 EYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKR-VKAQIWDT 71 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQER+ +T YY+ AVGA +V+DI+++ ++E+V +W +L K H + I L+ Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKEL--KEHAD--ANIIIELVG 127 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NK D + + + F E+ + E SA + N++ + L++ I Sbjct: 128 NKSDLDHLRAVPTEEAKNFAMENNLL-FTEASALSSDNVDLSFHQLLKNI 176 >1Z22-A nrPDB Length = 168 Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 59/171 (34%), Positives = 94/171 (54%), Gaps = 7/171 (4%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 E K++V+G VGK+S+I+RY +F++ Y+ TIGVDF + + + VRL LWD Sbjct: 3 EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED-VRLMLWDT 61 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQE F +T+ YY+ A +VF + +FEA+ W+ + ++V IP L+ Sbjct: 62 AGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV-----GDIPTALVQ 116 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 NK D DS + + K ++ TS K+++N+ E ++L EK L Sbjct: 117 NKIDLLDDSCIKNEEAEGLAKRLKLR-FYRTSVKEDLNVSEVFKYLAEKHL 166 >1WMS-A nrPDB Length = 177 Score = 103 bits (258), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 2/172 (1%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 + LFKV+++G+ GVGK+S++ RYV F TIGV+F K L D V +Q+WD Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGH-FVTMQIWD 62 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQERF ++ +Y+ + + F + S +F+ + WK + + P V+L Sbjct: 63 TAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVIL 122 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 NK D + + S + +C+++G +FETSAKD N+ A V ++L Sbjct: 123 GNKIDIS-ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVL 173 >2F7S-A nrPDB Length = 217 Score = 103 bits (258), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 13/180 (7%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT--------- 73 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + ++++ Sbjct: 23 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAF 82 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 V LQLWD AGQERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 83 KVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 142 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 VL+ NK D + Q + ++G +FETSA N+E+A L++ I+ Sbjct: 143 D---IVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEKAVETLLDLIM 198 >2EW1-A nrPDB Length = 201 Score = 103 bits (257), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 14/195 (7%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G + E + LFK+++IG GVGKT +++R+ LF ATIGVDF +K + + Sbjct: 13 GLVPRGSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEING 72 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 V+LQ+WD AGQERF ++T+ YY+ A + +DI+ +F + +W +++ Sbjct: 73 EK-VKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS-- 129 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE-----AAR 186 + + VL+ NK D + S + ++F + + ETSAK++ N+E+ A R Sbjct: 130 --NKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMY-YLETSAKESDNVEKLFLDLACR 186 Query: 187 FLVE---KILVNHQS 198 + E LVN+ S Sbjct: 187 LISEARQNTLVNNVS 201 >2OCB-A nrPDB Length = 180 Score = 103 bits (256), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 2/169 (1%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 L KV+++G+ GVGK+S++ RYV F TIGV+F + L D R V LQ+WD AG Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGR-FVTLQIWDTAG 65 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 QERF ++ +Y+ A + F + +FE + W+ + + + P V+L NK Sbjct: 66 QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNK 125 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D+ +D + + +C E+G + ETSAKD+ N+ A V ++L Sbjct: 126 VDK-EDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVL 173 >2IEY-A nrPDB Length = 195 Score = 102 bits (253), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 56/180 (31%), Positives = 98/180 (54%), Gaps = 13/180 (7%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL-------- 74 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + +D++ Sbjct: 9 DYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKAF 68 Query: 75 -VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 V LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 69 KVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENP 128 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 VL+ NK D + Q + +++G +FETSA N+E++ L++ I+ Sbjct: 129 D---IVLIGNKADLPDQREVNERQARELAEKYGIP-YFETSAATGQNVEKSVETLLDLIM 184 >3CPH-A nrPDB Length = 213 Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 58/184 (31%), Positives = 105/184 (57%), Gaps = 11/184 (5%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 +A++ ++ + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + Sbjct: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 V+LQLWD AGQERF +T YY+ A+G +V+D++ TF + +W ++ + Sbjct: 68 K-VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHAN--- 123 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA----ARFL 188 +L+ NK D + + Q + KE G + E+SAK++ N+ E A+ + Sbjct: 124 -DEAQLLLVGNKSDM-ETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLI 180 Query: 189 VEKI 192 EKI Sbjct: 181 QEKI 184 >2G77-B nrPDB Length = 198 Score = 100 bits (250), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 65/188 (34%), Positives = 100/188 (53%), Gaps = 11/188 (5%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 + A+ P R +FK++VIG+ VGKT + R+ F ATIGVDF + ++ Sbjct: 14 AVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDI 73 Query: 70 DSRTLVRLQLWDIAGQERF-GNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKV 128 D +++QLWD AGQERF +M + YY+ V+D++ ++F ++ W + K Sbjct: 74 DGER-IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIE--ECKQ 130 Query: 129 HLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQ-FCKEHGFAGWFETSAK---DNINIEEA 184 HL + IP +L+ NKCD + + Q P+ + Q F H FETSAK DN ++E Sbjct: 131 HLL-ANDIPRILVGNKCDL-RSAIQVPTDLAQKFADTHSMP-LFETSAKNPNDNDHVEAI 187 Query: 185 ARFLVEKI 192 L K+ Sbjct: 188 FMTLAHKL 195 >3RWM-B nrPDB Length = 185 Score = 100 bits (249), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 55/171 (32%), Positives = 100/171 (58%), Gaps = 6/171 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 ++LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA + + +++ ++ Q+WD Sbjct: 8 DYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKK-IKAQIWDT 66 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG ER+ +T YY+ AVGA +V+DIS+SS++E W ++L + L+ Sbjct: 67 AGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENAD----DNVAVGLIG 122 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 NK D + + F E+ + ETSA ++ N+++A R L+ I Sbjct: 123 NKSDLAHLRAVPTDEAKNFAMENQML-FTETSALNSDNVDKAFRELIVAIF 172 >1X3S-A nrPDB Length = 195 Score = 100 bits (249), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 60/169 (35%), Positives = 97/169 (57%), Gaps = 8/169 (4%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K+L+IGE GVGK+S++ R+ F ATIGVDF +K ++ D +L +WD AGQ Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNK-AKLAIWDTAGQ 74 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF +T YY+ A G +V+D++R TF + W ++L++ + I +L+ NK Sbjct: 75 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRND---IVNMLVGNKI 131 Query: 146 D-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D +N++ ++ +F ++H + E SAK ++ A LVEKI+ Sbjct: 132 DKENREVDRNEGL--KFARKHSML-FIEASAKTCDGVQCAFEELVEKII 177 >1D5C-A nrPDB Length = 162 Score = 100 bits (248), Expect = 6e-22, Method: Compositional matrix adjust. Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 6/157 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 +K++ +GE VGKTSII R+++ F +Y++TIG+DF K L D VRLQLWD AGQ Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLDEGP-VRLQLWDTAGQ 60 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ +FE KW D+ ++ G + L+ NK Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILNE----RGKDVIIALVGNKT 116 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 D + + Q +E+ + ETSAK NI+ Sbjct: 117 DLGDLRKVTYEEGMQKAQEYN-TMFHETSAKAGHNIK 152 >2OCY-C nrPDB Length = 170 Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 58/174 (33%), Positives = 102/174 (58%), Gaps = 11/174 (6%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + V+LQLWD Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK-VKLQLWDT 59 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF +T YY+ A+G +V+D++ TF + +W ++ H + + + +L+ Sbjct: 60 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQL--LLVG 115 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA----ARFLVEKI 192 NK D + + Q + KE G + E+SAK++ N+ E A+ + EKI Sbjct: 116 NKSDM-ETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLIQEKI 167 >2G6B-A nrPDB Length = 180 Score = 98.2 bits (243), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 53/160 (33%), Positives = 94/160 (58%), Gaps = 7/160 (4%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLF-SQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 FKV+++G+ GVGKT ++ R+ F + + +T+G+DF KVL+ D V+LQ+WD AG Sbjct: 11 FKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDG-VKVKLQMWDTAG 69 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 QERF ++T YY++A +++D++ ++F+ + W ++ +H + +LL NK Sbjct: 70 QERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTE----IHEYAQHDVALMLLGNK 125 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 D + ++ KE+G + ETSAK +N++ A Sbjct: 126 VDSAHERVVKREDGEKLAKEYGLP-FMETSAKTGLNVDLA 164 >1Z06-A nrPDB Length = 189 Score = 97.4 bits (241), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 63/177 (35%), Positives = 97/177 (54%), Gaps = 11/177 (6%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 +R +FK++VIG+ VGKT + R+ F ATIGVDF + ++ D +++QLW Sbjct: 16 SRSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGER-IKIQLW 74 Query: 81 DIAGQERF-GNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 D AGQERF +M + YY+ V+D++ ++F ++ W + K HL + IP + Sbjct: 75 DTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIE--ECKQHLL-ANDIPRI 131 Query: 140 LLANKCDQNKDSSQSPSQVDQ-FCKEHGFAGWFETSAK---DNINIEEAARFLVEKI 192 L+ NKCD + + Q P+ + Q F H FETSAK DN ++E L K+ Sbjct: 132 LVGNKCDL-RSAIQVPTDLAQKFADTHSMP-LFETSAKNPNDNDHVEAIFMTLAHKL 186 >1YZU-A nrPDB Length = 170 Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust. Identities = 58/173 (33%), Positives = 95/173 (54%), Gaps = 6/173 (3%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 +R + FKV+++GE VGKTS++ RY F+ + T+ F K LN + V L +W Sbjct: 2 SRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKR-VNLAIW 60 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQERF + +YY+++ GA +V+DI+ +F+ V W +L + G+ I + Sbjct: 61 DTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKML----GNEICLCI 116 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 + NK D K+ S + + + + G A + TSAK N IEE L ++++ Sbjct: 117 VGNKIDLEKERHVSIQEAESYAESVG-AKHYHTSAKQNKGIEELFLDLCKRMI 168 >3BC1-A nrPDB Length = 195 Score = 95.5 bits (236), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 55/180 (30%), Positives = 97/180 (53%), Gaps = 13/180 (7%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR---------T 73 ++L K L +G+ GVGKTS++ +Y F+ + T+G+DF K + + + Sbjct: 9 DYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRGQ 68 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 + LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L ++H + Sbjct: 69 RIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQL--QMHAYSE 126 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +P VL NK D + + + +++G +FETSA + NI A L++ I+ Sbjct: 127 NP-DIVLCGNKSDLEDQRAVKEEEARELAEKYGIP-YFETSAANGTNISHAIEMLLDLIM 184 >5XC3-A nrPDB Length = 176 Score = 95.1 bits (235), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/160 (33%), Positives = 98/160 (61%), Gaps = 11/160 (6%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALK-VLNWDSRTLVRLQLWDIAG 84 +K+++IG GVGK+SI+ +++ + TIG FA K V+ + +TL +L +WD AG Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTL-KLNIWDTAG 64 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 QERF ++T++YY ++G VVFD++ +F+ V W +DL H + +++ANK Sbjct: 65 QERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCH----TTYYILVVANK 120 Query: 145 CDQNKDSSQ-SPSQVDQFCKEHG----FAGWFETSAKDNI 179 D +K++ + S +++ +FC+++ FA FE+ +N+ Sbjct: 121 IDIDKNNWRVSENEIKKFCRDNDCDYVFASSFESDTVNNL 160 >5YOZ-A nrPDB Length = 177 Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/158 (34%), Positives = 83/158 (52%), Gaps = 7/158 (4%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++GE G GK+SI R+ F + TIG F K + D R L + ++WD AG E Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRAL-KYEIWDTAGLE 75 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP-IPAVLLANKC 145 RF ++ +YY+ A GA VV+DI+ S + + W +L + N P + VL+ NK Sbjct: 76 RFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRA-----NADPSLIIVLVGNKK 130 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 D S + E A ++E SAKDN N+E+ Sbjct: 131 DLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQ 168 >6O62-A nrPDB Length = 184 Score = 94.4 bits (233), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 55/173 (31%), Positives = 94/173 (54%), Gaps = 10/173 (5%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + + K+L++G+ GVGK+ ++ R+V F+ + TIG+DF ++ + + ++LQ+WD Sbjct: 12 DMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKR-IKLQVWDT 70 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF +T YY+ A+G +++D++ S +FE V W + H + I L+ Sbjct: 71 AGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQ--HANEDAQI--FLVG 126 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIE----EAARFLVEK 191 NKCD + S Q + + + E SAK N N++ E A + EK Sbjct: 127 NKCDDEVNRQVSKEQGQELAAKLNVP-FLEASAKSNENVDSIFYELASIIQEK 178 >4FMC-F nrPDB Length = 117 Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 44/119 (36%), Positives = 74/119 (62%), Gaps = 5/119 (4%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 +L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ+WD AGQER Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQIWDTAGQER 59 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 F +T YY+ A G VV+D++ +F V +W ++D + +L+ NKCD Sbjct: 60 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA----SENVNKLLVGNKCD 114 >2P5S-A nrPDB Length = 199 Score = 94.4 bits (233), Expect = 4e-20, Method: Compositional matrix adjust. Identities = 56/174 (32%), Positives = 96/174 (55%), Gaps = 14/174 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 +K+++ G+ VGK+S + R F ++ AT+GVDF +K L D V LQLWD AGQ Sbjct: 29 YKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIVDGERTV-LQLWDTAGQ 87 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ + Y+++A G +++D++ +F + +W ++ H +P +L+ NK Sbjct: 88 ERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAH----ETVPIMLVGNKA 143 Query: 146 DQNKDSSQSPSQV-------DQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D +D++ + Q ++ +G A + ETSAKD NI EA L ++ Sbjct: 144 DI-RDTAATEGQKCVPGHFGEKLAMTYG-ALFCETSAKDGSNIVEAVLHLAREV 195 >2FG5-A nrPDB Length = 192 Score = 93.6 bits (231), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 58/158 (36%), Positives = 87/158 (55%), Gaps = 6/158 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 KV ++G+ GVGK+SI+ R+V F + TIG F K + + L + +WD AGQ Sbjct: 24 LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNE-LHKFLIWDTAGQ 82 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ +YY+ + A +V+DI++ +F + KW +L K H P I + NKC Sbjct: 83 ERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKEL--KEHGPEN--IVMAIAGNKC 138 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 D + D + P + + E A ETSAK+ INIEE Sbjct: 139 DLS-DIREVPLKDAKEYAESIGAIVVETSAKNAINIEE 175 >4G01-B nrPDB Length = 181 Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 8/158 (5%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G++G GK+S++ R+V F + +TIG F + L + T V+ ++WD AGQE Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT-VKFEIWDTAGQE 72 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NKC 145 R+ ++ +YY+ A A +VFD++ ++FE KW +L ++ G+P + LA NK Sbjct: 73 RYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ-----GNPNMVMALAGNKS 127 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 D + + +E+G + ETSAK N++E Sbjct: 128 DLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKE 164 >2N1B-A nrPDB Length = 261 Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 9/168 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++G+ G GKT+ +KR++ F + Y AT+GV+ V + +R ++ +WD AGQ Sbjct: 52 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFH-TNRGPIKFNVWDTAGQ 110 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 E+FG + YY +A A ++FD++ T++ V W DL IP VL NK Sbjct: 111 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVLCGNKV 165 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D ++ S V F ++ +++ SAK N N E+ +L K++ Sbjct: 166 DIKDRKVKAKSIV--FHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLI 210 >5UWI-A nrPDB Length = 237 Score = 90.1 bits (222), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 9/168 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++G+ G GKT+ +KR++ F + Y AT+GV+ V + +R ++ +WD AGQ Sbjct: 32 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFH-TNRGPIKFNVWDTAGQ 90 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 E+FG + YY +A A ++FD++ T++ V W DL IP VL NK Sbjct: 91 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVLCGNKV 145 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D ++ S V F ++ +++ SAK N N E+ +L K++ Sbjct: 146 DIKDRKVKAKSIV--FHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLI 190 >5CLL-A nrPDB Length = 191 Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 54/168 (32%), Positives = 91/168 (54%), Gaps = 9/168 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++G+ G GKT+ +KR++ F + Y AT+GV+ V + +R ++ +WD AGQ Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFH-TNRGPIKFNVWDTAGQ 69 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 E+FG + YY +A A ++FD++ T++ V W DL IP VL NK Sbjct: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVLCGNKV 124 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D ++ S V F ++ +++ SAK N N E+ +L K++ Sbjct: 125 DIKDRKVKAKSIV--FHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLI 169 >1EK0-A nrPDB Length = 170 Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 53/170 (31%), Positives = 92/170 (54%), Gaps = 9/170 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K++++GE VGK+SI+ R+V F+++ TIG F + + + T V+ ++WD AGQ Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHT-VKFEIWDTAGQ 62 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ +YY+ A A VV+D+++ +F W +L H I L+ NK Sbjct: 63 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKEL----HEQASKDIIIALVGNKI 118 Query: 146 DQNKDSSQ---SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D ++ + + + ++ +E G +FETSAK N+ + + EKI Sbjct: 119 DMLQEGGERKVAREEGEKLAEEKGLL-FFETSAKTGENVNDVFLGIGEKI 167 >1YVD-A nrPDB Length = 169 Score = 88.6 bits (218), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 12/161 (7%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 KV ++G+ GVGK+SI+ R+V F + TIG F K + + + L + +WD AGQ Sbjct: 6 LKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNE-LHKFLIWDTAGQ 64 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA--- 142 ERF + +YY+ + A +V+DI++ TF + W +L + H P P++++A Sbjct: 65 ERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVREL--RQHGP-----PSIVVAIAG 117 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 NKCD D + + + + A + ETSAK+ INI E Sbjct: 118 NKCDLT-DVREVMERDAKDYADSIHAIFVETSAKNAININE 157 >3E5H-A nrPDB Length = 178 Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 50/151 (33%), Positives = 78/151 (51%), Gaps = 2/151 (1%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K++V+G+ GKTS+ + + F + Y+ TIG+DF L+ + V LQ+WDI GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 G M Y A G +V+DI+ +FE + W + + P+ A L+ NK Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVA-LVGNKI 125 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176 D + P + +FC+E+GF+ F SAK Sbjct: 126 DLEHMRTIKPEKHLRFCQENGFSSHF-VSAK 155 >4KYI-B nrPDB Length = 170 Score = 86.7 bits (213), Expect = 8e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 6/167 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++GE VGK+S++ R+V F ++ +TIG F + + D T V+ ++WD AG Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTT-VKFEIWDTAGL 68 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ER+ ++ +YY+ A A VV+DI+ + TF W +L + PN I L NK Sbjct: 69 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQAS-PN---IVIALAGNKA 124 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + + + ++ + ETSAK +N+ E + +K+ Sbjct: 125 DLASKRAVEFQEAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKL 170 >1TU4-A nrPDB Length = 171 Score = 86.3 bits (212), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 51/167 (30%), Positives = 88/167 (52%), Gaps = 6/167 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++GE VGK+S++ R+V F + +TIG F + + D T V+ ++WD AGQ Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTT-VKFEIWDTAGQ 66 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ER+ ++ +YY+ A A VV+DI+ +F W +L + PN I L NK Sbjct: 67 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQAS-PN---IVIALSGNKA 122 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + + + ++ + ETSAK ++N+ E + +K+ Sbjct: 123 DLANKRAVDFQEAQSYADDNSLL-FMETSAKTSMNVNEIFMAIAKKL 168 >2HEI-A nrPDB Length = 179 Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 50/159 (31%), Positives = 84/159 (52%), Gaps = 8/159 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++GE VGK+S++ R+V F ++ +TIG F + + D T V+ ++WD AGQ Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTT-VKFEIWDTAGQ 67 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NK 144 ER+ ++ +YY+ A A VV+DI+ TF W +L + SP + LA NK Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQ-----ASPSIVIALAGNK 122 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 D + + ++ + ETSAK +N+ + Sbjct: 123 ADLANKRMVEYEEAQAYADDNSLL-FMETSAKTAMNVND 160 >4DJT-A nrPDB Length = 218 Score = 84.7 bits (208), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/158 (33%), Positives = 84/158 (53%), Gaps = 7/158 (4%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIG-VDFALKVLNWDSRTLVRLQ 78 E RE +K+ +IG+ GVGKT+ I R + F ++Y AT+G V+ + L+ D +++ Sbjct: 6 ERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLD-DQGNVIKFN 64 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQE+ + VYY A GA + FD++ T + + +W + + V G+ P Sbjct: 65 VWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVV----GNEAPI 120 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176 V+ ANK D S V + K + +FE SAK Sbjct: 121 VVCANKIDIKNRQKISKKLVMEVLKGKNYE-YFEISAK 157 >3WYF-A nrPDB Length = 219 Score = 84.0 bits (206), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 93/183 (50%), Gaps = 9/183 (4%) Query: 15 AAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL 74 +APA FK++++G+ G GKT+ +KR++ F + Y ATIGV+ + + + Sbjct: 2 SAPAANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVH-PLSFYTNFGE 60 Query: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 ++ +WD AG E+FG + YY A A ++FD++ T++ V W DL Sbjct: 61 IKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVCE----- 115 Query: 135 PIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 IP VL NK D + + ++ F ++ +++ SAK N N E+ +L K+ Sbjct: 116 NIPIVLCGNKVDVKERKVK--AKTITFHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLAG 172 Query: 195 NHQ 197 N Q Sbjct: 173 NPQ 175 >5XOJ-A nrPDB Length = 182 Score = 83.6 bits (205), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 9/183 (4%) Query: 15 AAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL 74 +APA FK++++G+ G GKT+ +KR++ F + Y ATIGV+ + + + Sbjct: 2 SAPAANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVE-VHPLSFYTNFGE 60 Query: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 ++ +WD AG E+FG + YY A A ++FD++ T++ V W DL + Sbjct: 61 IKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL-----VRVCE 115 Query: 135 PIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 IP VL NK D + + ++ F ++ +++ SAK N N E+ +L K+ Sbjct: 116 NIPIVLCGNKVDVKERKVK--AKTITFHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLAG 172 Query: 195 NHQ 197 N Q Sbjct: 173 NPQ 175 >4M8N-E nrPDB Length = 199 Score = 77.4 bits (189), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 7/175 (4%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 P RE +K++V+G GVGK+++ ++V +F + Y TI D K + D++ + L Sbjct: 1 GPHMRE--YKLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDAQQCM-L 56 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 ++ D AG E+F M +Y K G +V+ I+ STF + + + + + + +P Sbjct: 57 EILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQI---LRVKDTDDVP 113 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NKCD + Q ++ + E+SAK IN+ E LV +I Sbjct: 114 MILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >4DXA-A nrPDB Length = 169 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 86/167 (51%), Gaps = 5/167 (2%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 +K++V+G +GVGK+++ ++V +F + Y TI D K + D++ + L++ D AG Sbjct: 6 YKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIE-DSYRKQVEVDAQQCM-LEILDTAGT 63 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 E+F M +Y K G +V+ I+ STF + + + + + + +P +L+ NKC Sbjct: 64 EQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQI---LRVKDTDDVPMILVGNKC 120 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + Q ++ + E+SAK IN+ E LV +I Sbjct: 121 DLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >3CLV-A nrPDB Length = 208 Score = 76.6 bits (187), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 44/206 (21%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL----------- 74 +K +++GE VGK+SI+ R F ++ TIG F V+N + + Sbjct: 8 YKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNEKNNN 67 Query: 75 -------------------------VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDIS 109 ++ +WD AGQER+ ++ +YY+ A A VVFDIS Sbjct: 68 INSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVVFDIS 127 Query: 110 RSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAG 169 S+T + W + L S +L+ANK D+NK +V ++ +++ Sbjct: 128 NSNTLDRAKTWVN------QLKISSNYIIILVANKIDKNK-FQVDILEVQKYAQDNNLL- 179 Query: 170 WFETSAKDNINIEEAARFLVEKILVN 195 + +TSAK NI+ L E+I N Sbjct: 180 FIQTSAKTGTNIKNIFYMLAEEIYKN 205 >5CM8-B nrPDB Length = 203 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 48/180 (26%), Positives = 89/180 (49%), Gaps = 6/180 (3%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 + + P L KV+++G GVGK+++ ++++ F + Y T + KV+ D Sbjct: 1 GSMSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGE 59 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 V++ + D AGQE + + Y++ G VF I+ +F+A +++ + + + N Sbjct: 60 E-VQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQI---LRVKN 115 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 IP +L+ NKCD N D + P Q + + ETSAK N+++ L+ +I Sbjct: 116 DESIPFLLVGNKCDLN-DKRKVPLSECQLRAQQWAVPYVETSAKTRENVDKVFFDLMREI 174 >4KU4-A nrPDB Length = 206 Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 55/188 (29%), Positives = 89/188 (47%), Gaps = 18/188 (9%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G+ A +P + K+ ++GE GVGKTS+ +FS+ Y T+ + + + Sbjct: 1 GSHMALSPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCVIDGI 60 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEA-------VLKWKSDL 124 + L++ D AGQE +G + + ++ +VFD++R S+FEA V++ K L Sbjct: 61 PS--HLEILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKL 118 Query: 125 DSKVHLPNG--------SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176 D P +P VL+ NKCD + + K+ G G+ ETSAK Sbjct: 119 DETRRHPGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLG-CGFVETSAK 177 Query: 177 DNINIEEA 184 N+EEA Sbjct: 178 LGTNVEEA 185 >2ERX-A nrPDB Length = 172 Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 19/165 (11%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++V V G GVGK+S++ R+V F + Y T+ D +V++ D +++ LQ+ D G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVE-DTYRQVISCD-KSICTLQITDTTGS 61 Query: 86 ERFGNMTRVYYKEAVGAFVVFDI-SRSS------TFEAVLKWKSDLDSKVHLPNGSPIPA 138 +F M R+ + +V+ I SR S +E + + K D++S IP Sbjct: 62 HQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEIKGDVES---------IPI 112 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 +L+ NKCD++ S+ + + A + ETSAK N N++E Sbjct: 113 MLVGNKCDESPSREVQSSEAEALARTWKCA-FMETSAKLNHNVKE 156 >1GWN-A nrPDB Length = 205 Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 20/162 (12%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++V+G+ GKT+++ + F ++Y T+ ++ D++ + L LWD +G Sbjct: 30 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTAS-FEIDTQR-IELSLWDTSGSP 87 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + N+ + Y ++ + FDISR T ++VL KWK ++ PN +L+ K Sbjct: 88 YYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQE--FCPNTK---MLLVGCKS 142 Query: 146 DQNKDSS---------QSPSQVDQ---FCKEHGFAGWFETSA 175 D D S Q+P DQ K+ G A + E SA Sbjct: 143 DLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 184 >1M7B-A nrPDB Length = 184 Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 20/162 (12%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++V+G+ GKT+++ + F ++Y T+ ++ D++ + L LWD +G Sbjct: 9 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTAS-FEIDTQR-IELSLWDTSGSP 66 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + N+ + Y ++ + FDISR T ++VL KWK ++ PN +L+ K Sbjct: 67 YYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQE--FCPNTK---MLLVGCKS 121 Query: 146 DQNKDSS---------QSPSQVDQ---FCKEHGFAGWFETSA 175 D D S Q+P DQ K+ G A + E SA Sbjct: 122 DLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSA 163 >2FN4-A nrPDB Length = 181 Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 46/155 (29%), Positives = 71/155 (45%), Gaps = 6/155 (3%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ +++ F Y TI D K+ + D RL + D AGQE FG M Y + Sbjct: 22 KSALTIQFIQSYFVSDYDPTIE-DSYTKICSVDG-IPARLDILDTAGQEEFGAMREQYMR 79 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G +VF I+ +F V K + + + + + P VL+ NK D S+ Sbjct: 80 AGHGFLLVFAINDRQSFNEVGKLFTQI---LRVKDRDDFPVVLVGNKADLESQRQVPRSE 136 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 F H A +FE SAK +N++EA LV + Sbjct: 137 ASAFGASHHVA-YFEASAKLRLNVDEAFEQLVRAV 170 >2J0V-A nrPDB Length = 212 Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 47/167 (28%), Positives = 79/167 (47%), Gaps = 16/167 (9%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 K + +G+ VGKT ++ Y F Y T+ +F+ V D + +V L LWD AG Sbjct: 9 FIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANVA-VDGQ-IVNLGLWDTAG 66 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLAN 143 QE + + + Y+ A + F + +++E VL KW +L + PN +P VL+ Sbjct: 67 QEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPEL--RRFAPN---VPIVLVGT 121 Query: 144 KCDQNKDSSQ--------SPSQVDQFCKEHGFAGWFETSAKDNINIE 182 K D D + +Q ++ K+ G A + E S+K N++ Sbjct: 122 KLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVK 168 >2ERY-A nrPDB Length = 172 Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 6/155 (3%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ +++ F Y TI D K D R RL + D AGQE FG M Y + Sbjct: 18 KSALTIQFIQSYFVTDYDPTIE-DSYTKQCVIDDRA-ARLDILDTAGQEEFGAMREQYMR 75 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G +VF ++ +FE + K++ + + + + P +L+ NK D + + + Sbjct: 76 TGEGFLLVFSVTDRGSFEEIYKFQRQI---LRVKDRDEFPMILIGNKADLDHQRQVTQEE 132 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 Q ++ + E SAK +N+++A LV I Sbjct: 133 GQQLARQLK-VTYMEASAKIRMNVDQAFHELVRVI 166 >5WDQ-A nrPDB Length = 170 Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 74/155 (47%), Gaps = 7/155 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AGQE + M Y + Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 77 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ + +FE + +++ + + + +P VL+ NKCD + +S Q Sbjct: 78 TGEGFLCVFAINNTKSFEDIHQYREQIK---RVKDSDDVPMVLVGNKCDAAARTVES-RQ 133 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + +G + ETSAK +E+A LV +I Sbjct: 134 AQDLARSYGIP-YIETSAKTRQGVEDAFYTLVREI 167 >3REG-A nrPDB Length = 194 Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust. Identities = 42/179 (23%), Positives = 82/179 (45%), Gaps = 10/179 (5%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 E + K++V+G+ VGKT ++ + Y T+ +F+ V+ + + + L L Sbjct: 18 ENGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFS-HVMKYKNEEFI-LHL 75 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPA 138 WD AGQE + + + Y ++ + F ++ ++F+ + KW+ ++ + Sbjct: 76 WDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDTAK-----T 130 Query: 139 VLLANKCDQNKDSSQ--SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 VL+ K D KD S + + D C++ G + E S+ I + E V+ I N Sbjct: 131 VLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKSVDCIFSN 189 >2REX-B nrPDB Length = 197 Score = 56.6 bits (135), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 44/172 (25%), Positives = 82/172 (47%), Gaps = 22/172 (12%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 AP+ K++++G++ GKT++++ + + Y T+ ++ + + R V L Sbjct: 3 APQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQR--VEL 60 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSD-LDSKVHLPNGSP 135 LWD +G + N+ + Y ++ + FDISR T ++ L KW+++ LD + P+ Sbjct: 61 SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILD---YCPSTR- 116 Query: 136 IPAVLLANKCDQNKDSS---------QSPSQVDQFC---KEHGFAGWFETSA 175 +L+ K D D S Q+P +Q C K+ G + E SA Sbjct: 117 --VLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSA 166 >2J1L-A nrPDB Length = 214 Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust. Identities = 34/128 (26%), Positives = 67/128 (52%), Gaps = 10/128 (7%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR-TLVRLQLWDIAGQ 85 KV+++G+ G GKTS++ + F + Y T+ F ++N + V L +WD AGQ Sbjct: 36 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTV---FERYMVNLQVKGKPVHLHIWDTAGQ 92 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 144 + + + ++Y +A + FD++ ++F+ + +W +++ H PI +++ K Sbjct: 93 DDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVN---HFCKKVPI--IVVGCK 147 Query: 145 CDQNKDSS 152 D KD S Sbjct: 148 TDLRKDKS 155 >5WDR-A nrPDB Length = 171 Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust. Identities = 41/155 (26%), Positives = 68/155 (43%), Gaps = 6/155 (3%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + Q F Y TI + V D L L + D AGQE + M Y + Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYRKHVSIDDEACL--LDILDTAGQEDYSAMRDQYMR 77 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G V+ I + + + ++ + + + + +P +L+ NKCD + S Sbjct: 78 TGEGFLCVYSIDSQQSLDEIHSFREQI---LRVKDQDEVPMILVGNKCDLEEHREVSTEA 134 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 K + + ETSAK IN+EEA LV +I Sbjct: 135 GQAVAKSYSIP-FMETSAKKRINVEEAFYQLVREI 168 >2Q3H-A nrPDB Length = 201 Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 23/167 (13%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K +++G+ VGKTS++ Y + Y T +F+ V++ D R VRLQL D AGQ+ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFS-AVVSVDGRP-VRLQLCDTAGQD 79 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 F + + Y + F + S+F+ V KW ++ + H P P +L+ + Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEI--RCHCPKA---PIILVGTQS 134 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D +D + ++D+ CKE EEAA+ L E+I Sbjct: 135 DLRED-VKVLIELDK-CKEKPVP-------------EEAAKLLAEEI 166 >2WBL-C nrPDB Length = 180 Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 48/167 (28%), Positives = 75/167 (44%), Gaps = 17/167 (10%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 K + +G+ VGKT ++ Y F Y T+ +F+ V+ D T V L LWD A Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVV-VDGST-VNLGLWDTA 62 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLA 142 GQE + + + Y+ A + F + +++E + KW +L H G IP VL+ Sbjct: 63 GQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELK---HYAPG--IPIVLVG 117 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI-NIEEAARFL 188 K D D QF K+H A T+ + + + A R+L Sbjct: 118 TKLDLRDDK--------QFLKDHPGAASITTAQGEELRKMIGAVRYL 156 >1ZC4-A nrPDB Length = 175 Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 81/168 (48%), Gaps = 6/168 (3%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 L KV+++G GVGK+++ ++++ F + Y T + KV+ D V++ + D AG Sbjct: 6 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEE-VQIDILDTAG 63 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + Y++ G VF I+ +F A ++ + + + +P +L+ NK Sbjct: 64 LEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQI---LRVKEDENVPFLLVGNK 120 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D +D Q + + E + ETSAK N+++ L+ +I Sbjct: 121 SDL-EDKRQVSVEEAKNRAEQWNVNYVETSAKTRANVDKVFFDLMREI 167 >2YC4-C nrPDB Length = 208 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 40/123 (32%), Positives = 60/123 (48%), Gaps = 4/123 (3%) Query: 27 KVLVIGELGVGKTSIIKRYVHQ--LFSQHYRATIGVDFALKVLNW-DSRTLVRLQLWDIA 83 KV V+GE VGK+++I + + F + Y T GV+ + + D+ V L L D A Sbjct: 22 KVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDTA 81 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 G + + Y+ A +VFD+S +FE+ W L S P+ AVL+AN Sbjct: 82 GSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWFELLKS-ARPDRERPLRAVLVAN 140 Query: 144 KCD 146 K D Sbjct: 141 KTD 143 >2W2X-A nrPDB Length = 185 Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 36/126 (28%), Positives = 63/126 (50%), Gaps = 8/126 (6%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G++ VGKT ++ Y F Y T+ +++ V+ DS+ V L LWD AGQ Sbjct: 10 IKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDSKP-VNLGLWDTAGQ 67 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + + F + +++E V KW ++ + H P+ P +L+ K Sbjct: 68 EDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEV--RHHCPS---TPIILVGTK 122 Query: 145 CDQNKD 150 D D Sbjct: 123 LDLRDD 128 >3TH5-A nrPDB Length = 204 Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 46/163 (28%), Positives = 75/163 (46%), Gaps = 20/163 (12%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L LWD AGQ Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKP-VNLGLWDTAGQ 88 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + + F + ++FE V KW ++ + H PN P +L+ K Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEV--RHHCPN---TPIILVGTK 143 Query: 145 CD--QNKDSSQ-------SPSQVDQ---FCKEHGFAGWFETSA 175 D +KD+ + +P Q KE G + E SA Sbjct: 144 LDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 186 >2KE5-A nrPDB Length = 174 Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 5/174 (2%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 L KV+++G GVGK+++ ++++ F + Y T + KV+ D V++ + D AG Sbjct: 3 LHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEE-VQIDILDTAG 60 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + Y++ G +VF I+ +F A +++ + +V IP +++ NK Sbjct: 61 LEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQI-LRVKAEE-DKIPLLVVGNK 118 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 D ++ Q P + + E + ETSAK N+++ L+ +I S Sbjct: 119 SDL-EERRQVPVEEARSKAEEWGVQYVETSAKTRANVDKVFFDLMREIRTKKMS 171 >2ATX-A nrPDB Length = 194 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 23/183 (12%) Query: 7 GDPGLG-AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALK 65 G PG G ++ A P + K +V+G+ VGKT ++ Y + F + Y T+ +A+ Sbjct: 1 GSPGAGRSSMAHGPGAL--MLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS 58 Query: 66 VLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDL 124 V + L L L+D AGQE + + + Y + F + ++F+ V +W +L Sbjct: 59 VTVGGKQYL--LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL 116 Query: 125 DSKVHLPNGSPIPAVLLANKCDQNKDS---------SQSPSQVDQ---FCKEHGFAGWFE 172 K + PN +P +L+ + D D + P V+Q KE G + E Sbjct: 117 --KEYAPN---VPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVE 171 Query: 173 TSA 175 SA Sbjct: 172 CSA 174 >3CON-A nrPDB Length = 190 Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AGQE + M Y + Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 91 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ S +F + ++ + + + +P VL+ NKCD + + Q Sbjct: 92 TGEGFLCVFAINNSKSFADINLYREQIK---RVKDSDDVPMVLVGNKCDLPTRTVDT-KQ 147 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + K +G + ETSAK +E+A LV +I Sbjct: 148 AHELAKSYGIP-FIETSAKTRQGVEDAFYTLVREI 181 >5UHV-A nrPDB Length = 166 Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 7/155 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AGQE + M Y + Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 73 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ S +F + ++ + + + +P VL+ NKCD + + Q Sbjct: 74 TGEGFLCVFAINNSKSFADINLYREQIK---RVKDSDDVPMVLVGNKCDLPTRTVDT-KQ 129 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + K +G + ETSAK +E+A LV +I Sbjct: 130 AHELAKSYGIP-FIETSAKTRQGVEDAFYTLVREI 163 >2NTY-C nrPDB Length = 180 Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 8/129 (6%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 K + +G+ VGKT ++ Y F Y T+ +F+ V+ D T V L LWD Sbjct: 4 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNT-VNLGLWDT 61 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLL 141 AGQE + + + Y+ A + F + +++E V KW +L H G PI +L+ Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELR---HYAPGVPI--ILV 116 Query: 142 ANKCDQNKD 150 K D D Sbjct: 117 GTKLDLRDD 125 >3BWD-D nrPDB Length = 182 Score = 53.1 bits (126), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 18/171 (10%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 K + +G+ VGKT ++ Y F Y T+ +F+ V+ + V L LWD Sbjct: 6 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGATVNLGLWDT 63 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLL 141 AGQE + + + Y+ A + F + +++E V KW +L H G PI VL+ Sbjct: 64 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELK---HYAPGVPI--VLV 118 Query: 142 ANKCDQNKDS----------SQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 K D D + Q ++ K G + E S+K N++ Sbjct: 119 GTKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVK 169 >4MIT-A nrPDB Length = 186 Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 8/126 (6%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K++V+G+ VGKT ++ Y + F + Y T+ ++ + L +R ++L LWD AG Sbjct: 11 IKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVS-LTAGTRQ-IQLALWDTAGL 68 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y A + F ++ S +++ V+ KW ++ +H +P +L+ K Sbjct: 69 EEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEV---IHF--APKVPIILVGTK 123 Query: 145 CDQNKD 150 D D Sbjct: 124 LDTRND 129 >2WKQ-A nrPDB Length = 332 Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 46/169 (27%), Positives = 76/169 (44%), Gaps = 20/169 (11%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 E + L K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L L Sbjct: 150 EAAKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKP-VNLGL 207 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPA 138 WD AG E + + + Y + + F + ++F V KW ++ + H PN P Sbjct: 208 WDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEV--RHHCPN---TPI 262 Query: 139 VLLANKCD--QNKDSSQ-------SPSQVDQ---FCKEHGFAGWFETSA 175 +L+ K D +KD+ + +P Q KE G + E SA Sbjct: 263 ILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 311 >5VCU-A nrPDB Length = 208 Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 20/178 (11%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT+++ Y F + Y T+ ++ + D +V + L+D AGQ Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDG--IVSIALYDTAGQ 69 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + V F + ++ E KW +L K + P+ P VL+ K Sbjct: 70 EDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEEL--KHYNPD---TPIVLVGTK 124 Query: 145 CDQNKDSSQ----SPSQVDQFCKEHG--------FAGWFETSAKDNINIEEAARFLVE 190 D KD ++ E G G+ E SAK N+ EA ++ Sbjct: 125 LDLKKDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAID 182 >3RYT-C nrPDB Length = 180 Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 20/163 (12%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L LWD AG Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKP-VNLGLWDTAGL 64 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + + F + ++FE V KW ++ + H PN P +L+ K Sbjct: 65 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEV--RHHCPN---TPIILVGTK 119 Query: 145 CD--QNKDSSQ-------SPSQVDQ---FCKEHGFAGWFETSA 175 D +KD+ + +P Q KE G + E SA Sbjct: 120 LDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 162 >3A58-B nrPDB Length = 188 Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 28/175 (16%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ F + Y T+ ++ V D R V L LWD AGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVADV-EVDGRR-VELALWDTAGQE 69 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y ++ + F I + E V KW +++ +H G PI +L+ K Sbjct: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEV---LHFCQGVPI--ILVGCKV 124 Query: 146 DQNKDSSQSPSQVDQFCKEH----------------GFAGWFETSAKDNINIEEA 184 D D P ++Q +E G G++E SAK + E Sbjct: 125 DLRND----PQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREV 175 >4WA7-A nrPDB Length = 170 Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 7/155 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AG E + M Y + Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGLEEYSAMRDQYMR 74 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ + +FE + ++ + + + +P VL+ NKCD + + Q Sbjct: 75 TGEGFLCVFAINNTKSFEDIHHYREQIK---RVKDSEDVPMVLVGNKCDLPSRTVDT-KQ 130 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + +G + ETSAK +++A LV +I Sbjct: 131 AQDLARSYGIP-FIETSAKTRQGVDDAFYTLVREI 164 >1RYH-A nrPDB Length = 203 Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 39/182 (21%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L LWD AGQ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGKP-VNLGLWDTAGQ 63 Query: 86 ERFGNMTRVYYKEAVGA-------------------FVVFDISRSSTFEAV-LKWKSDLD 125 E + + + Y + VG + F + ++FE V KW ++ Sbjct: 64 EDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV- 122 Query: 126 SKVHLPNGSPIPAVLLANKCD--QNKDSSQ-------SPSQVDQ---FCKEHGFAGWFET 173 + H PN P +L+ K D +KD+ + +P Q KE G + E Sbjct: 123 -RHHCPN---TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 178 Query: 174 SA 175 SA Sbjct: 179 SA 180 >5ZHX-e nrPDB Length = 198 Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 20/170 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ + F + Y T+ ++ + D + V L LWD AGQE Sbjct: 12 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 69 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 70 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNKK 124 Query: 146 DQNKDS---------SQSPSQVDQ---FCKEHGFAGWFETSAKDNINIEE 183 D D Q P + ++ G G+ E SAK + E Sbjct: 125 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 174 >3OES-A nrPDB Length = 201 Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 40/154 (25%), Positives = 76/154 (49%), Gaps = 10/154 (6%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFA-LKVLNWDSRTLVRLQLWDIAGQ 85 KV+++G VGKTS+ ++V FS+ Y T+ ++ + L D L L D AGQ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVENTYSKIVTLGKDE---FHLHLVDTAGQ 82 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG-SPIPAVLLANK 144 + + + + G +V+ ++ +F+ + L K+H +G + +P VL+ NK Sbjct: 83 DEYSILPYSFIIGVHGYVLVYSVTSLHSFQVI----ESLYQKLHEGHGKTRVPVVLVGNK 138 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDN 178 D + + + + + G A + E+SA++N Sbjct: 139 ADLSPEREVQAVEGKKLAESWG-ATFMESSAREN 171 >3PIR-A nrPDB Length = 183 Score = 50.4 bits (119), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 51/184 (27%), Positives = 92/184 (50%), Gaps = 8/184 (4%) Query: 11 LGAAAAPA-PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 LG+ A A P +K++V+G+ GVGK+++ ++ ++F Y TI D LK Sbjct: 3 LGSMATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIE-DSYLKHTEI 61 Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 D++ + L + D AGQE F M Y + G +V+ ++ ++FE V ++ + + Sbjct: 62 DNQWAI-LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLI---LR 117 Query: 130 LPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKD-NINIEEAARFL 188 + + P +L+ANK D + Q + ++ + ETSAKD +N+++ L Sbjct: 118 VKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIP-YIETSAKDPPLNVDKTFHDL 176 Query: 189 VEKI 192 V I Sbjct: 177 VRVI 180 >5C2K-A nrPDB Length = 415 Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 20/171 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ + F + Y T+ ++ + D + V L LWD AGQE Sbjct: 14 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 71 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 72 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNKK 126 Query: 146 DQNKDS---------SQSPSQVDQ---FCKEHGFAGWFETSAKDNINIEEA 184 D D Q P + ++ G G+ E SAK + E Sbjct: 127 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVREV 177 >3RAP-R nrPDB Length = 167 Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 6/146 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ ++V F + Y TI DF K + DS V L++ D AG E+F +M +Y K Sbjct: 16 KSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSV-LEILDTAGTEQFASMRDLYIK 73 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G +V+ + +F+ + K D + + +P +L+ NK D + S S+ Sbjct: 74 NGQGFILVYSLVNQQSFQDI---KPMRDQIIRVKRYEKVPVILVGNKVDLESEREVSSSE 130 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEE 183 +E G + ETSAK ++E Sbjct: 131 GRALAEEWG-CPFMETSAKSKTMVDE 155 >2ATV-A nrPDB Length = 196 Score = 49.7 bits (117), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 15/153 (9%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K+ + G GVGK++++ R++ + F Y T+ + + D +V +++ D AGQE Sbjct: 30 KLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDE--VVSMEILDTAGQE 87 Query: 87 ----RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 R G+M + G +V+DI+ +FE VL K+ LD + + +L+ Sbjct: 88 DTIQREGHM-----RWGEGFVLVYDITDRGSFEEVLPLKNILD---EIKKPKNVTLILVG 139 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSA 175 NK D + S + ++ E A ++E SA Sbjct: 140 NKADLDHSRQVSTEEGEKLATELACA-FYECSA 171 >5ZVP-A nrPDB Length = 181 Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 20/171 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ F + Y T+ ++ V D + V L LWD AGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVADV-EVDGKH-VELALWDTAGQE 64 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y ++ + F I + + V KW S++ +H G PI +L+ K Sbjct: 65 DYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEV---LHFCQGLPI--ILVGCKK 119 Query: 146 DQNKD---------SSQ---SPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 D D +SQ +P Q ++ K+ G + E SA+ N + E Sbjct: 120 DLRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREV 170 >2GF0-A nrPDB Length = 199 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 12/149 (8%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+S++ R+V F Y TI D +V++ D +++ LQ+ D G +F M R+ Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIE-DTYRQVISCD-KSVCTLQITDTTGSHQFPAMQRLSIS 78 Query: 98 EAVGAFVVFDISRSSTFE---AVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQS 154 + +VF ++ + E + K + V IP +L+ NKCD+ + + Sbjct: 79 KGHAFILVFSVTSKQSLEELGPIYKLIVQIKGSVE-----DIPVMLVGNKCDETQ--REV 131 Query: 155 PSQVDQFCKEHGFAGWFETSAKDNINIEE 183 ++ Q + + ETSAK N N++E Sbjct: 132 DTREAQAVAQEWKCAFMETSAKMNYNVKE 160 >4U5X-A nrPDB Length = 178 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 18/170 (10%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 K + +G+ VGKT ++ Y F Y T+ +F+ V + D ++V L LWD A Sbjct: 4 RFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSANV-SVDG-SVVNLGLWDTA 61 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLA 142 G E + + + Y+ A + F + +++E V KW +L + P +P VL+ Sbjct: 62 GLEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPEL--RRFAPG---VPVVLVG 116 Query: 143 NKCDQNKD----------SSQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 K D +D S + Q ++ K G + E S+K NI+ Sbjct: 117 TKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIK 166 >3VHL-B nrPDB Length = 195 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 37/139 (26%), Positives = 62/139 (44%), Gaps = 12/139 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGK ++ Y F Y T+ ++A+ V+ L L+D AGQ Sbjct: 11 IKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEP--YTLGLFDTAGQ 68 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + V F + S+FE V KW ++ H P P +L+ + Sbjct: 69 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITH--HCPK---TPFLLVGTQ 123 Query: 145 CDQNKDSSQSPSQVDQFCK 163 D D PS +++ K Sbjct: 124 IDLRDD----PSTIEKLAK 138 >3T5G-A nrPDB Length = 181 Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 8/160 (5%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 P+++ K+ ++G VGK+S+ ++V F Y TI F K++ + + LQ Sbjct: 2 PQSKSR--KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTFT-KLITVNGQEY-HLQ 57 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 L D AGQ+ + + Y + G +V+ ++ +FE + L + + IP Sbjct: 58 LVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKL---LDMVGKVQIPI 114 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDN 178 +L+ NK D + + S + + E A + E+SAK+N Sbjct: 115 MLVGNKKDLHMERVISYEE-GKALAESWNAAFLESSAKEN 153 >2FV8-A nrPDB Length = 207 Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 8/125 (6%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++V+G+ GKT ++ + F + Y T+ ++ + D + V L LWD AGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 84 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y + + F + + E + KW ++ K PN +P +L+ANK Sbjct: 85 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEV--KHFCPN---VPIILVANKK 139 Query: 146 DQNKD 150 D D Sbjct: 140 DLRSD 144 >5JCP-B nrPDB Length = 419 Score = 47.4 bits (111), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 42/170 (24%), Positives = 72/170 (42%), Gaps = 20/170 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ F + Y T+ ++ + D + V L LWD AGQE Sbjct: 245 KLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVADI-EVDGKQ-VELALWDTAGQE 302 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y + + F I + E + KW ++ K PN +P +L+ NK Sbjct: 303 DYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV--KHFCPN---VPIILVGNKK 357 Query: 146 DQNKDS---------SQSPSQVDQ---FCKEHGFAGWFETSAKDNINIEE 183 D D Q P + ++ G G+ E SAK + E Sbjct: 358 DLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVRE 407 >4WNR-A nrPDB Length = 349 Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 49/212 (23%), Positives = 87/212 (41%), Gaps = 35/212 (16%) Query: 2 AGGGAGDPGLGAAAAPAPETREHLF----------------KVLVIGELGVGKTSIIKRY 45 A GG+G+P + RE + KVL++G+ GKTS++KR Sbjct: 2 AMGGSGNPLEKPPIEIVKQGREAVINYFKSLEGEKKPLNEVKVLLVGDGEAGKTSLLKRL 61 Query: 46 VHQLFSQHYRATIGVDFALKVLNW---DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGA 102 + + F + T G++ + W D +++ WD GQE + + + Sbjct: 62 LGEGFDGNEHQTQGIN----IKKWGFKDKDKEIKVNFWDFGGQEIMHATHQFFLSKRSLY 117 Query: 103 FVVFDISRSSTFEAVLKWKSDLDSKVHLPN-GSPIPAVLLANKCDQNKDSSQSPSQVDQF 161 +V D R E LK H+ + G P ++ NK D+N + + + Sbjct: 118 ILVLDSRRDEKAEYWLK---------HIRSFGGDSPVLVALNKIDENPSFELNRKFLQE- 167 Query: 162 CKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 K G+F S K++ IE ++ L +++L Sbjct: 168 -KYPSIKGFFRISCKEDRGIEGFSQKLKKELL 198 >2H57-A nrPDB Length = 190 Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 15/171 (8%) Query: 28 VLVIGELGVGKTSIIKRY-VHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 VL +G GKT+II + SQ+ TIG F+++ S + ++D++GQ Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIG--FSIEKFKSSS---LSFTVFDMSGQG 78 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN--GSPIPAVLLANK 144 R+ N+ YYKE G ++F I S V+ K +LD+ ++ P+ IP + ANK Sbjct: 79 RYRNLWEHYYKE--GQAIIFVIDSSDRLRMVVA-KEELDTLLNHPDIKHRRIPILFFANK 135 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN---IEEAARFLVEKI 192 D +D+ S C E+ + A D I ++E +L ++I Sbjct: 136 MDL-RDAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQI 185 >3D6T-B nrPDB Length = 171 Score = 43.1 bits (100), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 13/145 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQ--HYRATIGVD---FALKVLNWDSRTLVRLQLW 80 K++++G G GKT+++++ + S AT+G+D + +++ + R LV L +W Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLV-LNVW 59 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISR-SSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 D AG+E F + + + V+D+S+ + +A+ W ++ ++ S P + Sbjct: 60 DFAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKAR-----ASSSPVI 114 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKE 164 L+ D + D Q + + + KE Sbjct: 115 LVGTHLDVS-DEKQRKACMSKITKE 138 >2AL7-A nrPDB Length = 186 Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 10/175 (5%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 P + ++ ++G GKT+ + FS+ T+G + KV ++ V + Sbjct: 15 VPRGSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMR-KV----TKGNVTI 69 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 ++WDI GQ RF +M Y + + D + EA +++L + + P IP Sbjct: 70 KIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEAS---RNELHNLLDKPQLQGIP 126 Query: 138 AVLLANKCD--QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 ++L NK D D Q +++ + + S K+ NI+ ++L++ Sbjct: 127 VLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQ 181 >4ILE-A nrPDB Length = 184 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 8/121 (6%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++ ++G GKT+ + F++ T+G F ++ + ++ V ++LWDI GQ Sbjct: 23 MELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVG--FNMRKI---TKGNVTIKLWDIGGQ 77 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 RF +M Y + + D + EA K++L + + P IP ++L NK Sbjct: 78 PRFRSMWERYCRGVSAIVYMVDAADQEKIEAS---KNELHNLLDKPQLQGIPVLVLGNKR 134 Query: 146 D 146 D Sbjct: 135 D 135 >5C1S-A nrPDB Length = 391 Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 28/193 (14%) Query: 1 MAGGGAGDPGLGAAAAPAP---------ETREHLF-----KVLVIGELGVGKTSIIKRYV 46 M GG G A PA TR + ++LV+G GVGKT++ + Sbjct: 24 MTGGQQMGRGSMAMIRPAHMIRPAHKSLRTRSQIIGKKEIRLLVVGSSGVGKTTLCDCFF 83 Query: 47 HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVF 106 SQ G + K + D+ +R+ + DIAGQ+ F Y V++ Sbjct: 84 ESHQSQ------GEETREKHVQIDN-DFIRISISDIAGQQSFYACDNP-YDGYDAILVMY 135 Query: 107 DISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 DI+ +F + W D + L +++ NK DQ D + + +QF ++ Sbjct: 136 DITELKSFTDLKTMWLPD----IFLYCNIDTQIIIIGNKKDQEIDRIITRKEAEQFAQDR 191 Query: 166 GFAGWFETSAKDN 178 ++E S KD+ Sbjct: 192 -LCQFYEISTKDD 203 Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust. Identities = 29/132 (21%), Positives = 59/132 (44%), Gaps = 28/132 (21%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQH-YRATIGVDFALKVLNWD-------------- 70 ++L++G+ VGKT+ I+++ Q + H + I F ++ + ++ Sbjct: 223 IRMLMVGDQNVGKTTFIRKFALQDPTGHDFMNAITTRFEMEKIKYEIIMIDWGFYNKLLQ 282 Query: 71 -----SRTL-VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDL 124 SRT+ L ++DI +E F N+ R YY F S ++ +K+DL Sbjct: 283 TNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKF-------SDVAGVIVGYKTDL 335 Query: 125 DSKVHLPNGSPI 136 +++ + G + Sbjct: 336 EAQRKITMGDAL 347 >4BAS-A nrPDB Length = 199 Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust. Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 16/129 (12%) Query: 26 FKVLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 +V++ G GKT+II + Q S+H AT+G + + + V ++D+ G Sbjct: 18 LQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYN-----VETFEKGRVAFTVFDMGG 72 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISR-------SSTFEAVLKWKSDLDSKVHLPNGSPIP 137 ++F + YY V D S S +A+LK + D + LP G +P Sbjct: 73 AKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHE---DIRRELPGGGRVP 129 Query: 138 AVLLANKCD 146 + ANK D Sbjct: 130 FLFFANKMD 138 >2H16-A nrPDB Length = 183 Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust. Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 13/148 (8%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 P +EH KV+++G GKT+I+ ++ H TIG + V+N Sbjct: 15 VPRGSHQEH--KVIIVGLDNAGKTTILYQFSMNEVV-HTSPTIGSNVEEIVIN-----NT 66 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R +WDI GQE + YY VV D S+ E + + +L + + Sbjct: 67 RFLMWDIGGQESLRSSWNTYYTNTEFVIVVVD---STDRERISVTREELYKMLAHEDLRK 123 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCK 163 ++ ANK Q+ + +++ QF K Sbjct: 124 AGLLIFANK--QDVKECMTVAEISQFLK 149 >3DPU-A nrPDB Length = 535 Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 23/134 (17%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALK-------VLNWDSRTLVRLQ 78 KV +IG+ GKTS++K+ + + F T G++ K + N D Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 101 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN----GS 134 WD GQ E + A F ++RSS + +L ++D + L + G Sbjct: 102 FWDFGGQ------------EIMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGG 149 Query: 135 PIPAVLLANKCDQN 148 P +++ NK D+N Sbjct: 150 KSPVIVVMNKIDEN 163 >2G3Y-A nrPDB Length = 211 Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust. Identities = 43/192 (22%), Positives = 86/192 (44%), Gaps = 11/192 (5%) Query: 11 LGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRY--VHQLFSQHYRATIGVDFALKVLN 68 + + + E+ ++V++IGE GVGK+++ + VH +G D + L Sbjct: 23 MSTDSVISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEV-LGEDTYERTLM 81 Query: 69 WD--SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDS 126 D S T++ L +W+ G+ + + + +A +V+ I+ ++FE + + L Sbjct: 82 VDGESATIILLDMWENKGENEWLHDHCMQVGDAY--LIVYSITDRASFEKASELRIQLRR 139 Query: 127 KVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAAR 186 + IP +L+ NK D + S S+ + C + ETSA N++E Sbjct: 140 ARQTED---IPIILVGNKSDLVRCREVSVSE-GRACAVVFDCKFIETSAAVQHNVKELFE 195 Query: 187 FLVEKILVNHQS 198 +V ++ + S Sbjct: 196 GIVRQVRLRRDS 207 >5EE5-B nrPDB Length = 171 Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 79/175 (45%), Gaps = 15/175 (8%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRY-VHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 TRE ++L++G G GKT+I+ R V ++ + TIG F ++ + + + ++ Q+ Sbjct: 5 TRE--MRILILGLDGAGKTTILYRLQVGEVVTTI--PTIG--FNVETVTYKN---LKFQV 55 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD+ G R YY V D S + + KS+L + + V Sbjct: 56 WDLGGLTSIRPYWRCYYSNTDAVIYVVD---SCDRDRIGISKSELVAMLEEEELRKAILV 112 Query: 140 LLANKCD--QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + ANK D Q SS+ + + + F+TSA ++EA +LVE + Sbjct: 113 VFANKQDMEQAMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVETL 167 >1MOZ-A nrPDB Length = 183 Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust. Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRY-VHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G G GKT+I+ R + ++ + + TIG F ++ L++ + ++L +WD+ G Sbjct: 19 LRILILGLDGAGKTTILYRLQIGEVVTT--KPTIG--FNVETLSYKN---LKLNVWDLGG 71 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q R YY + V D Sbjct: 72 QTSIRPYWRCYYADTAAVIFVVD 94 >2CJW-A nrPDB Length = 192 Score = 37.0 bits (84), Expect = 0.006, Method: Compositional matrix adjust. Identities = 43/182 (23%), Positives = 82/182 (45%), Gaps = 11/182 (6%) Query: 26 FKVLVIGELGVGKTSIIKRY--VHQLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWD 81 ++V++IGE GVGK+++ + VH +G D + L D S T++ L +W+ Sbjct: 7 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDC-EVLGEDTYERTLMVDGESATIILLDMWE 65 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 G+ + + + +A +V+ I+ ++FE + + L + IP +L+ Sbjct: 66 NKGENEWLHDHCMQVGDAY--LIVYSITDRASFEKASELRIQLRRARQTED---IPIILV 120 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPN 201 NK D + S S+ + C + ETSA N++E +V ++ + S Sbjct: 121 GNKSDLVRCREVSVSE-GRACAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEK 179 Query: 202 EE 203 E Sbjct: 180 NE 181 >5HZH-A nrPDB Length = 332 Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust. Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 18/114 (15%) Query: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNG 133 V L LWD AG E + + + Y + + F + ++FE V KW ++ + H PN Sbjct: 203 VNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEV--RHHCPN- 259 Query: 134 SPIPAVLLANKCD--QNKDSSQ-------SPSQVDQ---FCKEHGFAGWFETSA 175 P +L+ K D +KD+ + +P Q KE G + E SA Sbjct: 260 --TPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSA 311 Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust. Identities = 12/42 (28%), Positives = 22/42 (52%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVL 67 K +V+G+ VGKT ++ Y F Y T+ +++ V+ Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM 48 >6HLU-A nrPDB Length = 974 Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust. Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 23/134 (17%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALK-------VLNWDSRTLVRLQ 78 KV +IG+ GKTS++K+ + + F T G++ K + N D Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 540 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN----GS 134 WD GQ E + A F ++RSS + +L ++D + L + G Sbjct: 541 FWDFGGQ------------EIMHASHQFFMTRSSVYMLLLDSRTDSNKHYWLRHIEKYGG 588 Query: 135 PIPAVLLANKCDQN 148 P +++ NK D+N Sbjct: 589 KSPVIVVMNKIDEN 602 >3LVQ-E nrPDB Length = 497 Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 6/84 (7%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + Q V F ++ + + + V+ +WD+ GQ Sbjct: 323 MRILMLGLDAAGKTTILYKLK---LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGGQ 376 Query: 86 ERFGNMTRVYYKEAVGAFVVFDIS 109 ++ + R YY G V D + Sbjct: 377 DKIRPLWRHYYTGTQGLIFVVDCA 400 >5NZV-F nrPDB Length = 181 Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G G GKT+++ ++L TI + F ++ + + + + +WD+ G Sbjct: 18 MRILMVGLDGAGKTTVL----YKLKLGEVITTIPTIGFNVETVQYKN---ISFTVWDVGG 70 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q+R ++ R YY+ G V D Sbjct: 71 QDRIRSLWRHYYRNTEGVIFVVD 93 >4ZI3-A nrPDB Length = 190 Score = 35.0 bits (79), Expect = 0.027, Method: Compositional matrix adjust. Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 14/132 (10%) Query: 15 AAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL 74 +AP E R +L++G GKT+++K+ + S H T G F +K + Sbjct: 12 SAPDQEVR-----ILLLGLDNAGKTTLLKQLASEDIS-HITPTQG--FNIKSVQSQG--- 60 Query: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 +L +WDI GQ + R Y++ V D + FE +L + S Sbjct: 61 FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEET---GQELTELLEEEKLS 117 Query: 135 PIPAVLLANKCD 146 +P ++ ANK D Sbjct: 118 CVPVLIFANKQD 129 >1KSG-A nrPDB Length = 186 Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 14/90 (15%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL----VRL 77 +E ++L++G GKT+I+K++ + VD L ++ +TL +L Sbjct: 15 KERELRLLMLGLDNAGKTTILKKFNGE----------DVDTISPTLGFNIKTLEHRGFKL 64 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFD 107 +WD+ GQ+ + R Y++ G V D Sbjct: 65 NIWDVGGQKSLRSYWRNYFESTDGLIWVVD 94 >4C0K-A nrPDB Length = 423 Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust. Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 28/170 (16%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ++ ++K VIG G GKT + + ++ + IG +F V+N + Sbjct: 241 QSSRSVYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCINSV------ 290 Query: 80 WDIAGQERFGNMTRVYYKEAVG-----------AFVVFDISRSSTFEAVLKWKSDLDSKV 128 + GQE+ + + + A+ A +V+D S +FE V + ++ Sbjct: 291 -QVYGQEKHLILRDIDVRHALDPLQPQEVNCDVACLVYDSSNPRSFEYVARIYIKYYAE- 348 Query: 129 HLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDN 178 S IP +++ KCD ++ Q +FC ++ S K N Sbjct: 349 -----SKIPVMIVGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLFSLKTN 393 >5DE3-A nrPDB Length = 169 Score = 34.3 bits (77), Expect = 0.045, Method: Compositional matrix adjust. Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 ++LV+G GKT+I+K + + T F +K L SR L++WDI GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEEDITT---ITPTQGFNIKSL---SRDGFNLKIWDIGGQK 55 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 R Y+ + V D + S + +L + + +P ++ ANK D Sbjct: 56 SIRPYWRNYFDQTDALIYVIDSADSKRLSES---EFELTELLQEEKMTGVPLLVFANKQD 112 >2A5F-A nrPDB Length = 175 Score = 33.1 bits (74), Expect = 0.091, Method: Compositional matrix adjust. Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 6/82 (7%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + Q V F ++ + + + V+ +WD+ GQ Sbjct: 14 MRILMLGLDAAGKTTILYKLK---LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGGQ 67 Query: 86 ERFGNMTRVYYKEAVGAFVVFD 107 ++ + R YY G V D Sbjct: 68 DKIRPLWRHYYTGTQGLIFVVD 89 >2NZJ-A nrPDB Length = 175 Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 19/130 (14%) Query: 25 LFKVLVIGELGVGKTSII-------KRYVH-QLFSQHYRATIGVDFALKVLNWDSRTLVR 76 L++V+++G+ GVGKTS+ +R +H QL Y T+ VD + TLV Sbjct: 4 LYRVVLLGDPGVGKTSLASLFAGKQERDLHEQLGEDVYERTLTVD-------GEDTTLVV 56 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 + W+ ++ + + +V+ I+ +FE+ + + L + H + Sbjct: 57 VDTWEAEKLDKSWSQESC-LQGGSAYVIVYSIADRGSFESASELRIQL-RRTH--QADHV 112 Query: 137 PAVLLANKCD 146 P +L+ NK D Sbjct: 113 PIILVGNKAD 122 >6CY1-A nrPDB Length = 329 Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust. Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 19/114 (16%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 + ++V+G GVGKT+ I + HQ S+ + +G + D +L +W Sbjct: 124 YVIMVVGVNGVGKTTTIGKLAHQFKSEGLKVVLGAADTFRAAAVD-----QLVIW----S 174 Query: 86 ERFGNMTRVYYKEAVG---AFVVFDISRSSTFE----AVLKWKSDLDSKVHLPN 132 ER G K+A+G A V FD +S+ + ++ L +KV+L N Sbjct: 175 ERVG---VPIVKQAMGSDPASVAFDTVQSAVSQDADVVIIDTAGRLHNKVNLMN 225 >4V0N-A nrPDB Length = 169 Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust. Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 7/119 (5%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 VLV+G GKT+II+R + Q V F + + T ++D++G R Sbjct: 9 VLVVGLDNSGKTTIIER-LKPRPRQAAEVAPTVGFTVDEVEKGPLTFT---VFDMSGAGR 64 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + YY+EA VVF + + V+ + +++ + N +P + ANK D Sbjct: 65 YRTLWEQYYREADA--VVFVVDSADKLRMVVA-RDEMEHMLKHSNMRKVPILYFANKKD 120 >3CBQ-A nrPDB Length = 195 Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust. Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 29/135 (21%) Query: 25 LFKVLVIGELGVGKTSIIKRYVH-QLFSQH--------YRATIGVDFALKVLNWDSRTLV 75 +FKV+++GE GVGK+++ + Q S H Y I VD + V Sbjct: 23 IFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVD----------KEEV 72 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAF-VVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 L ++DI Q G R + + AF +VF ++ +F V ++ + L G Sbjct: 73 TLVVYDIWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKV------PETLLRLRAGR 126 Query: 135 P---IPAVLLANKCD 146 P +P +L+ NK D Sbjct: 127 PHHDLPVILVGNKSD 141 >6BBQ-A nrPDB Length = 520 Score = 31.6 bits (70), Expect = 0.29, Method: Compositional matrix adjust. Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 6/84 (7%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + Q V F ++ + + + V+ +WD+ G Sbjct: 360 MRILMLGLDAAGKTTILYKLK---LGQSVTTIPTVGFNVETVTYKN---VKFNVWDVGGL 413 Query: 86 ERFGNMTRVYYKEAVGAFVVFDIS 109 ++ + R YY G V D + Sbjct: 414 DKIRPLWRHYYTGTQGLIFVVDCA 437 >3IHW-A nrPDB Length = 184 Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust. Identities = 43/191 (22%), Positives = 81/191 (42%), Gaps = 41/191 (21%) Query: 22 REHLF------KVLVIGELGVGKTSIIKRYVHQLFSQ-------HYRATIGVDFALKVLN 68 RE+L+ KV ++G L GK++++ RY+ + Q ++ I VD +L Sbjct: 11 RENLYFQGPELKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGRFKKEIVVDGQSYLL- 69 Query: 69 WDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFV-VFDISRSSTFEAVLKWKSDLDSK 127 L+R + G + + V A V VF + +F+ V + L S Sbjct: 70 -----LIRDE----------GGPPELQFAAWVDAVVFVFSLEDEISFQTVYNYFLRLCS- 113 Query: 128 VHLPNGSPIPAVLLANKCDQNKDSSQSPSQVD-----QFCKEHGFAGWFETSAKDNINIE 182 N S +P VL+ Q+ S+ +P +D + + ++ET A +N+E Sbjct: 114 --FRNASEVPMVLVGT---QDAISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVE 168 Query: 183 EAARFLVEKIL 193 + + +K++ Sbjct: 169 RVFQDVAQKVV 179 >3Q85-A nrPDB Length = 169 Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust. Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 29/135 (21%) Query: 25 LFKVLVIGELGVGKTSIIKRY-------VHQLFSQH--YRATIGVDFALKVLNWDSRTLV 75 +FKV+++GE GVGK+++ + H++ + Y I VD + V Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVD----------KEEV 51 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAF-VVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 L ++DI Q G + + + AF +VF ++ +F V ++ + L G Sbjct: 52 TLIVYDIWEQGDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKV------PETLLRLRAGR 105 Query: 135 P---IPAVLLANKCD 146 P +P +L+ NK D Sbjct: 106 PHHDLPVILVGNKSD 120 >5UF8-A nrPDB Length = 181 Score = 30.8 bits (68), Expect = 0.48, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 18 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 70 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q++ + R Y++ G V D Sbjct: 71 QDKIRPLWRYYFQNTQGIIFVVD 93 >3O47-A nrPDB Length = 329 Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 166 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 218 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q++ + R Y++ G V D Sbjct: 219 QDKIRPLWRHYFQNTQGLIFVVD 241 >3BH6-A nrPDB Length = 164 Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust. Identities = 30/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 ++L++G GKT+++K+ + S H T G F +K + +L +WDI G Sbjct: 6 RILLLGLDNAGKTTLLKQLASEDIS-HITPTQG--FNIKSVQSQG---FKLNVWDIGGLR 59 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + R Y++ V D + FE +L + S +P ++ ANK D Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEET---GQELTELLEEEKLSCVPVLIFANKQD 116 >6BPM-C nrPDB Length = 727 Score = 30.4 bits (67), Expect = 0.60, Method: Composition-based stats. Identities = 13/40 (32%), Positives = 21/40 (52%) Query: 149 KDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFL 188 KD +Q S + EH F W + A D+I++ AR++ Sbjct: 612 KDVAQDGSSSLPYTPEHAFTLWSQYQATDDISVGAGARYI 651 >6D4G-A nrPDB Length = 271 Score = 30.0 bits (66), Expect = 0.76, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 21/101 (20%) Query: 101 GAFVVFDISR--SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQV 158 G + D+SR + F+ LK+ S+L +++ + P V++ KCD+ V Sbjct: 164 GFLLGIDVSRGMNRNFDDQLKFVSNLYNQLA---KTKKPIVIVLTKCDEG---------V 211 Query: 159 DQFCKE-HGFA------GWFETSAKDNINIEEAARFLVEKI 192 +++ ++ H FA ETSA+ N+N++ A LV+ I Sbjct: 212 ERYIRDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 252 >1YZG-A nrPDB Length = 179 Score = 30.0 bits (66), Expect = 0.77, Method: Compositional matrix adjust. Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 8/86 (9%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 +EH KV+++G GKT+I+ +++ H TIG + V+ ++ L +WD Sbjct: 15 QEH--KVIIVGLDNAGKTTILYQFLMNEVV-HTSPTIGSNVEEIVVK-NTHFL----MWD 66 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFD 107 I GQE + YY +V D Sbjct: 67 IGGQESLRSSWNTYYSNTEFIILVVD 92 >4YLG-A nrPDB Length = 173 Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust. Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKTSI+ ++L TI + F ++ + + + + +WD+ G Sbjct: 14 MRILMVGLDAAGKTSIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 66 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q++ + R YY+ V D Sbjct: 67 QDKIRPLWRHYYQNTQAIIFVVD 89 >6FAE-B nrPDB Length = 213 Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 50 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 102 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q++ + R Y++ G V D Sbjct: 103 QDKIRPLWRHYFQNTQGLIFVVD 125 >1YE8-A nrPDB Length = 178 Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 19/24 (79%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQL 49 K+++ GE GVGKT+++K+ V +L Sbjct: 1 MKIIITGEPGVGKTTLVKKIVERL 24 >3LRP-A nrPDB Length = 181 Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 16/86 (18%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIG-VDFALKVLNWDSRTL----VRLQLWD 81 ++L++G GKT+I+ Y+ +G V + + ++ T+ + +WD Sbjct: 19 RILMVGLDAAGKTTIL-----------YKVKLGEVVTTIPTIGFNVETVEFRNISFTVWD 67 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFD 107 + GQ++ + R YY G V D Sbjct: 68 VGGQDKIRPLWRHYYSNTDGLIFVVD 93 >3C5H-A nrPDB Length = 255 Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust. Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 21/101 (20%) Query: 101 GAFVVFDISR--SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQV 158 G + D+SR + F+ LK+ S+L +++ + P V++ KCD+ V Sbjct: 165 GFLLGIDVSRGMNRNFDDQLKFVSNLYNQLA---KTKKPIVVVLTKCDEG---------V 212 Query: 159 DQFCKE-HGFA------GWFETSAKDNINIEEAARFLVEKI 192 +++ ++ H FA ETSA+ N+N++ A LV+ I Sbjct: 213 ERYIRDAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 >2BDW-A nrPDB Length = 362 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 14/82 (17%) Query: 33 ELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD----IAGQERF 88 ELG G S+++R VH+ T G++FA K++N + Q + I + + Sbjct: 36 ELGKGAFSVVRRCVHK--------TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 87 Query: 89 GNMTRVY--YKEAVGAFVVFDI 108 N+ R++ +E ++VFD+ Sbjct: 88 PNIVRLHDSIQEESFHYLVFDL 109 >3AQ4-A nrPDB Length = 184 Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust. Identities = 26/122 (21%), Positives = 58/122 (47%), Gaps = 11/122 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 21 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 73 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 Q++ + R Y++ G V D S+ + V++ + +L ++ ++ ANK Sbjct: 74 QDKIRPLWRHYFQNTQGLIFVVD---SNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 130 Query: 145 CD 146 D Sbjct: 131 QD 132 >5FG8-A nrPDB Length = 285 Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 15/103 (14%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 GA AAPA TR + ELG G SI+KR V + + G +FA K++N Sbjct: 1 GAMAAPAACTR-FSDNYDIKEELGKGAFSIVKRCVQK--------STGFEFAAKIINTKK 51 Query: 72 RTLVRLQLWD----IAGQERFGNMTRVY--YKEAVGAFVVFDI 108 T Q + I + N+ R++ +E ++VFD+ Sbjct: 52 LTARDFQKLEREARICRKLHHPNIVRLHDSIQEENYHYLVFDL 94 >3KK8-A nrPDB Length = 284 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 14/82 (17%) Query: 33 ELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD----IAGQERF 88 ELG G S+++R VH+ T G++FA K++N + Q + I + + Sbjct: 13 ELGKGAFSVVRRCVHK--------TTGLEFAAKIINTKKLSARDFQKLEREARICRKLQH 64 Query: 89 GNMTRVY--YKEAVGAFVVFDI 108 N+ R++ +E ++VFD+ Sbjct: 65 PNIVRLHDSIQEESFHYLVFDL 86 >2R5V-A nrPDB Length = 357 Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust. Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 13/75 (17%) Query: 95 YYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQS 154 YY+ A+G +FD E ++ ++S V + L+ + D+N D Sbjct: 177 YYERALGFRQIFD-------EHIVVGAQAMNSTVVQSASGAVTLTLI--EPDRNAD---- 223 Query: 155 PSQVDQFCKEHGFAG 169 P Q+D+F K+H AG Sbjct: 224 PGQIDEFLKDHQGAG 238 >4KV9-A nrPDB Length = 412 Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust. Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 16/138 (11%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL-VRLQLWDIA 83 +F +L +GE G+GK+++++ +Q F D LK + +D + V+L+L + Sbjct: 41 VFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLTDPKLKAVTYDLKEANVKLKLTVV- 99 Query: 84 GQERFGNMTRVYYKEAVGAFVVF-DISRSSTFEAVLKWKSDL----DSKVHL------PN 132 E G ++ + + V + D + + LK K + D++VH+ P Sbjct: 100 --ETCGYGDQINKENNIKPVVDYIDNQFENYLQEELKMKRSMQAFHDTRVHVCLYFIAPT 157 Query: 133 GSPIPAV-LLANKCDQNK 149 G + ++ L+A K +NK Sbjct: 158 GHSLKSIDLVAMKKLENK 175 >2B6H-A nrPDB Length = 192 Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust. Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 30 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ICFTVWDVGG 82 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 Q++ + R Y++ G V D Sbjct: 83 QDKIRPLWRHYFQNTQGLIFVVD 105 >5KZQ-A nrPDB Length = 570 Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust. Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 9/72 (12%) Query: 96 YKEAVGAFVVFDISRSST----FEAVLKWKSDLDSKVHL-----PNGSPIPAVLLANKCD 146 + + +G + +F R+ + ++ V W L L P+ P+PA + C Sbjct: 446 FGDGIGRYNIFTYLRAGSGRYRYQKVGYWAEGLTLDTSLIPWASPSAGPLPASRCSEPCL 505 Query: 147 QNKDSSQSPSQV 158 QN+ S P +V Sbjct: 506 QNEVKSVQPGEV 517 >1Z6X-A nrPDB Length = 180 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 11/122 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 18 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ICFTVWDVGG 70 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 Q+R + + Y++ G V D S+ E + + +L + + +L ANK Sbjct: 71 QDRIRPLWKHYFQNTQGLIFVVD---SNDRERIQEVADELQKMLLVDELRDAVLLLFANK 127 Query: 145 CD 146 D Sbjct: 128 QD 129 >4CMR-A nrPDB Length = 597 Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 6/49 (12%) Query: 154 SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNE 202 +P Q+D+F GW + K I I A F+ +K+ ++S P E Sbjct: 260 NPKQLDRFL------GWIDGLKKRGIEIINVAEFIRKKVSNEYKSLPGE 302 >5KSO-A nrPDB Length = 190 Score = 28.1 bits (61), Expect = 3.3, Method: Compositional matrix adjust. Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 27/155 (17%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL-KVLNWDSRTLVRLQ 78 +T+ ++F+ VIG GK+ +++ A +G + K + D ++ + Sbjct: 3 QTQRNVFRCNVIGVKNCGKSGVLQ------------ALLGRNLMRQKKIREDHKSYYAIN 50 Query: 79 LWDIAGQERFGNMTRVYYKEAVG--------AFVVFDISRSSTFEAVLKWKSDLDSKVHL 130 + GQE++ + + E + +V+D+S +FE + K H Sbjct: 51 TVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARI-----FKQHF 105 Query: 131 PNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 + S IP +++A K D ++ + FC++H Sbjct: 106 MD-SRIPCLIVAAKSDLHEVKQEYSISPTDFCRKH 139 >5KU1-A nrPDB Length = 424 Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust. Identities = 31/155 (20%), Positives = 66/155 (42%), Gaps = 27/155 (17%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL-KVLNWDSRTLVRLQ 78 +T+ ++F+ VIG GK+ +++ A +G + K + D ++ + Sbjct: 237 QTQRNVFRCNVIGVKNCGKSGVLQ------------ALLGRNLMRQKKIREDHKSYYAIN 284 Query: 79 LWDIAGQERFGNMTRVYYKEAVG--------AFVVFDISRSSTFEAVLKWKSDLDSKVHL 130 + GQE++ + + E + +V+D+S +FE + K H Sbjct: 285 TVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARI-----FKQHF 339 Query: 131 PNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 + S IP +++A K D ++ + FC++H Sbjct: 340 MD-SRIPCLIVAAKSDLHEVKQEYSISPTDFCRKH 373 >1M2O-B nrPDB Length = 190 Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust. Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 ++ +D+ G + + + Y+ E G + D + F+ + +LD+ ++ Sbjct: 67 IKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEA---RVELDALFNIAELK 123 Query: 135 PIPAVLLANKCDQNKDSSQS 154 +P V+L NK D S++ Sbjct: 124 DVPFVILGNKIDAPNAVSEA 143 >6GNI-B nrPDB Length = 167 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 75 VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 ++ +D+ G + + + Y+ E G + D + F+ + +LD+ ++ Sbjct: 45 IKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEA---RVELDALFNIAELK 101 Query: 135 PIPAVLLANKCDQNKDSSQS 154 +P V+L NK D S++ Sbjct: 102 DVPFVILGNKIDAPNAVSEA 121 >6FOC-A nrPDB Length = 548 Score = 27.7 bits (60), Expect = 3.9, Method: Compositional matrix adjust. Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 18/116 (15%) Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLD--SKVHLPNGSPIPAVLLANK 144 R G ++ + V + D+S+ EA + SDLD SK L G+ + +L Sbjct: 376 RVGGAAQIKAMKEVAGSLRLDLSQYRELEAFAAFASDLDAASKAQLDRGARLVELL---- 431 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK-DNINIEEAARF---LVEKILVNH 196 K SP V+ E A + T D++ +E+ RF L+E + +H Sbjct: 432 ----KQPQYSPLAVE----EQVVAIFLGTQGHLDSVPVEDVQRFESELLEHVKASH 479 >6FHW-A nrPDB Length = 616 Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/41 (36%), Positives = 19/41 (46%) Query: 156 SQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNH 196 S V Q+ + GF W ET A I+ R LVE + H Sbjct: 193 SYVGQYWNQSGFDLWEETYASSFFTIQNQHRALVEGAQLAH 233 >4R0L-C nrPDB Length = 129 Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 5/58 (8%) Query: 44 RYVHQLFSQHYRATI--GVDFALKVLNWDSRTLVRLQLWDIAGQE---RFGNMTRVYY 96 +Y + LFS+ +RA++ GVD A++V + + Q + G + + GN T +Y Sbjct: 24 KYTYNLFSKEFRASLYKGVDSAVEVCVVNGNYSHQPQFYSSTGFDCDGKLGNETVTFY 81 >4DKN-A nrPDB Length = 223 Score = 26.9 bits (58), Expect = 6.2, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%) Query: 1 MAGGGAGDPGLGAAAAPAPETREHL--FKVLVIGELGVG 37 M GGG GDP G+ A T+ L L+I LG G Sbjct: 26 MVGGGKGDPNAGSLVTTAKSTKGALKFSPYLMIPHLGYG 64 >6DFF-C nrPDB Length = 193 Score = 26.9 bits (58), Expect = 6.7, Method: Compositional matrix adjust. Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 30 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 82 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 ++ + R Y++ G V D Sbjct: 83 LDKIRPLWRHYFQNTQGLIFVVD 105 >6FA9-A nrPDB Length = 655 Score = 26.9 bits (58), Expect = 6.8, Method: Compositional matrix adjust. Identities = 11/24 (45%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Query: 26 FKVLV-IGELGVGKTSIIKRYVHQ 48 ++VL+ +GE G GKT+ I +Y+H+ Sbjct: 47 YQVLILVGETGSGKTTQIPQYLHE 70 >6CES-A nrPDB Length = 313 Score = 26.9 bits (58), Expect = 7.4, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYR---ATIGVDFA-LKVLNWDSRTLVRLQLWDI 82 KVL++G+ G GKTS+ ++ R ATI V+ + ++ L LV L LWD Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLG----NLV-LNLWDC 63 Query: 83 AGQERF 88 GQ+ F Sbjct: 64 GGQDTF 69 >2WAN-A nrPDB Length = 921 Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 3/56 (5%) Query: 106 FDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQF 161 FD SR + F+ V + S S +HL N P + A++ QN +SP+ F Sbjct: 802 FDWSRKAQFKDVFDYFS---SMIHLRNQHPAFRMTTADQIKQNLTFLESPTNTVAF 854 >1J2J-A nrPDB Length = 166 Score = 26.6 bits (57), Expect = 8.1, Method: Compositional matrix adjust. Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 8/83 (9%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSRTLVRLQLWDIAG 84 ++L++G GKT+I+ ++L TI + F ++ + + + + +WD+ G Sbjct: 3 MRILMVGLDAAGKTTIL----YKLKLGEIVTTIPTIGFNVETVEYKN---ISFTVWDVGG 55 Query: 85 QERFGNMTRVYYKEAVGAFVVFD 107 ++ + R Y++ G V D Sbjct: 56 LDKIRPLWRHYFQNTQGLIFVVD 78 >5IRR-A nrPDB Length = 308 Score = 26.6 bits (57), Expect = 8.4, Method: Compositional matrix adjust. Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%) Query: 7 GDPGLGAAAAPAPET--REHLFKVLVIGELGVGKTSIIKRYV 46 G L P P ++ K++V+G+ G+GKT++IK + Sbjct: 6 GKDALLGPRRPRPHKIWKKKYIKLIVVGDSGLGKTTLIKSLI 47 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4CZ2-A nrPDB 296 4e-81 5SZJ-A nrPDB 265 9e-72 6FF8-A nrPDB 254 2e-68 5FBL-B nrPDB 245 1e-65 2IEZ-A nrPDB 239 6e-64 5LPN-A nrPDB 238 1e-63 5SZI-A nrPDB 237 3e-63 3L0I-B nrPDB 237 4e-63 2RHD-A nrPDB 236 6e-63 5SZH-B nrPDB 236 7e-63 4LHX-A nrPDB 234 2e-62 6IYB-A nrPDB 234 3e-62 5LDD-C nrPDB 234 3e-62 1YZN-A nrPDB 233 4e-62 1Z0A-A nrPDB 233 6e-62 2A5J-A nrPDB 231 2e-61 3CUE-F nrPDB 230 3e-61 2F9L-A nrPDB 230 5e-61 1Z0F-A nrPDB 229 7e-61 2WWX-A nrPDB 229 8e-61 4UJ4-A nrPDB 228 1e-60 2HUP-A nrPDB 227 4e-60 4RKE-A nrPDB 225 1e-59 3BFK-A nrPDB 225 1e-59 2GF9-A nrPDB 225 2e-59 2OCB-A nrPDB 225 2e-59 2BMD-A nrPDB 224 2e-59 2F7S-A nrPDB 224 2e-59 4RKF-A nrPDB 224 2e-59 4QXA-A nrPDB 223 3e-59 1WMS-A nrPDB 223 3e-59 2G6B-A nrPDB 223 4e-59 3CPH-A nrPDB 223 5e-59 1ZBD-A nrPDB 222 8e-59 5XR6-A nrPDB 222 1e-58 5LEF-A nrPDB 222 1e-58 6O62-A nrPDB 222 1e-58 5UB8-A nrPDB 222 1e-58 3RAB-A nrPDB 221 2e-58 4PHF-A nrPDB 221 2e-58 2O52-A nrPDB 221 2e-58 6IF2-B nrPDB 221 2e-58 3DZ8-A nrPDB 221 2e-58 2IL1-A nrPDB 219 9e-58 2EW1-A nrPDB 218 1e-57 3CPJ-B nrPDB 218 2e-57 2OCY-C nrPDB 217 3e-57 2IEY-A nrPDB 217 3e-57 2G77-B nrPDB 216 6e-57 6HUF-A nrPDB 216 7e-57 3TSO-A nrPDB 213 4e-56 3RWM-B nrPDB 212 8e-56 1X3S-A nrPDB 212 1e-55 1TU4-A nrPDB 212 1e-55 4G01-B nrPDB 212 2e-55 1Z06-A nrPDB 211 2e-55 2HEI-A nrPDB 210 6e-55 3BC1-A nrPDB 209 6e-55 4KYI-B nrPDB 209 9e-55 2FFQ-A nrPDB 208 2e-54 5YOZ-A nrPDB 208 2e-54 2GIL-A nrPDB 205 1e-53 2FG5-A nrPDB 205 1e-53 4M8N-E nrPDB 204 2e-53 5CM8-B nrPDB 204 2e-53 1D5C-A nrPDB 204 3e-53 1YZU-A nrPDB 203 3e-53 1EK0-A nrPDB 203 4e-53 2J0V-A nrPDB 202 8e-53 4DXA-A nrPDB 200 5e-52 1YVD-A nrPDB 198 2e-51 5C2K-A nrPDB 198 2e-51 3BWD-D nrPDB 197 3e-51 3WYF-A nrPDB 197 3e-51 2N1B-A nrPDB 197 4e-51 2P5S-A nrPDB 196 6e-51 5XOJ-A nrPDB 196 7e-51 2NTY-C nrPDB 195 9e-51 4U5X-A nrPDB 195 2e-50 2WBL-C nrPDB 195 2e-50 5ZHX-e nrPDB 194 2e-50 1Z22-A nrPDB 194 3e-50 5JCP-B nrPDB 192 7e-50 1ZC4-A nrPDB 192 1e-49 5UWI-A nrPDB 192 1e-49 2KE5-A nrPDB 191 2e-49 4KU4-A nrPDB 190 3e-49 3TH5-A nrPDB 190 4e-49 5CLL-A nrPDB 190 5e-49 3RYT-C nrPDB 187 3e-48 2WKQ-A nrPDB 186 6e-48 2FV8-A nrPDB 186 6e-48 2ATX-A nrPDB 185 9e-48 2W2X-A nrPDB 185 1e-47 2J1L-A nrPDB 185 1e-47 5ZVP-A nrPDB 184 3e-47 3A58-B nrPDB 183 5e-47 5WDR-A nrPDB 182 1e-46 4FMC-F nrPDB 181 2e-46 5VCU-A nrPDB 181 2e-46 3E5H-A nrPDB 180 5e-46 1RYH-A nrPDB 180 6e-46 2ERY-A nrPDB 178 1e-45 3REG-A nrPDB 177 2e-45 4WA7-A nrPDB 177 3e-45 3VHL-B nrPDB 177 4e-45 3PIR-A nrPDB 176 6e-45 3CON-A nrPDB 176 7e-45 4MIT-A nrPDB 176 8e-45 2ERX-A nrPDB 176 9e-45 2FN4-A nrPDB 176 9e-45 5UHV-A nrPDB 175 1e-44 5WDQ-A nrPDB 175 1e-44 2Q3H-A nrPDB 173 4e-44 3CLV-A nrPDB 173 5e-44 4DJT-A nrPDB 171 2e-43 2ATV-A nrPDB 166 6e-42 5XC3-A nrPDB 166 9e-42 3OES-A nrPDB 164 4e-41 1GWN-A nrPDB 163 6e-41 3RAP-R nrPDB 161 2e-40 3T5G-A nrPDB 160 4e-40 1M7B-A nrPDB 160 7e-40 2GF0-A nrPDB 151 3e-37 2AL7-A nrPDB 150 4e-37 5C1S-A nrPDB 146 6e-36 4ILE-A nrPDB 144 3e-35 2REX-B nrPDB 142 9e-35 4WNR-A nrPDB 134 4e-32 2YC4-C nrPDB 128 2e-30 2H16-A nrPDB 120 4e-28 2H57-A nrPDB 116 8e-27 3D6T-B nrPDB 106 6e-24 4BAS-A nrPDB 91 3e-19 Sequences not found previously or not previously below threshold: 4KLZ-A nrPDB 183 5e-47 5HZH-A nrPDB 125 1e-29 2G3Y-A nrPDB 123 8e-29 2CJW-A nrPDB 123 8e-29 3CBQ-A nrPDB 118 2e-27 2NZJ-A nrPDB 115 1e-26 3Q85-A nrPDB 112 1e-25 1YZG-A nrPDB 111 3e-25 3Q72-A nrPDB 107 3e-24 3C5C-A nrPDB 103 6e-23 4YLG-A nrPDB 103 9e-23 3LRP-A nrPDB 99 7e-22 1Z6X-A nrPDB 99 7e-22 5NZV-F nrPDB 100 1e-21 5EE5-B nrPDB 100 1e-21 6HLU-A nrPDB 98 3e-21 3O47-A nrPDB 98 3e-21 3DPU-A nrPDB 98 4e-21 3LVQ-E nrPDB 97 4e-21 3AQ4-A nrPDB 97 5e-21 2A5F-A nrPDB 97 7e-21 6FAE-B nrPDB 96 1e-20 5UF8-A nrPDB 96 2e-20 6BBQ-A nrPDB 94 4e-20 2B6H-A nrPDB 94 5e-20 6DFF-C nrPDB 93 8e-20 1J2J-A nrPDB 93 8e-20 4V0N-A nrPDB 91 5e-19 1MOZ-A nrPDB 90 7e-19 4ZI3-A nrPDB 90 8e-19 1KSG-A nrPDB 89 1e-18 3IHW-A nrPDB 89 1e-18 5DE3-A nrPDB 86 8e-18 3BH6-A nrPDB 84 6e-17 2IWR-A nrPDB 83 1e-16 2X77-A nrPDB 79 2e-15 4C0K-A nrPDB 79 2e-15 1M2O-B nrPDB 73 8e-14 6GNI-B nrPDB 72 2e-13 1F6B-A nrPDB 71 5e-13 2GAO-A nrPDB 70 9e-13 5DI3-B nrPDB 69 1e-12 4M9Q-A nrPDB 69 1e-12 6CES-A nrPDB 58 2e-09 6D4G-A nrPDB 56 1e-08 3C5H-A nrPDB 56 1e-08 6IAE-A nrPDB 56 1e-08 5YMX-A nrPDB 56 1e-08 3IEU-A nrPDB 56 2e-08 6GDG-D nrPDB 55 2e-08 2E87-A nrPDB 54 4e-08 2GJ9-A nrPDB 53 8e-08 5KU1-A nrPDB 53 9e-08 5KSO-A nrPDB 53 9e-08 2LKD-A nrPDB 53 9e-08 5KUT-A nrPDB 52 2e-07 1MKY-A nrPDB 52 2e-07 3T1O-A nrPDB 52 3e-07 6G79-A nrPDB 51 3e-07 2CXX-A nrPDB 51 4e-07 4ARZ-A nrPDB 50 8e-07 5YT0-A nrPDB 49 1e-06 5FG3-A nrPDB 49 1e-06 5LAD-A nrPDB 49 1e-06 2Q3F-A nrPDB 49 2e-06 3J8G-X nrPDB 48 2e-06 3CB4-D nrPDB 48 3e-06 3R9W-A nrPDB 47 5e-06 3GEH-A nrPDB 47 6e-06 4NCL-A nrPDB 47 7e-06 4N3G-A nrPDB 47 7e-06 4TN1-B nrPDB 47 8e-06 2DYK-A nrPDB 47 8e-06 5ZZM-A nrPDB 47 8e-06 3PR1-A nrPDB 47 8e-06 1WF3-A nrPDB 47 8e-06 3K53-A nrPDB 46 1e-05 1XZP-A nrPDB 46 1e-05 2GTP-A nrPDB 46 1e-05 1LNZ-A nrPDB 46 2e-05 4V7F-o nrPDB 46 2e-05 3LLU-A nrPDB 45 2e-05 6GB2-BC nrPDB 45 2e-05 4UJC-AB nrPDB 45 3e-05 2QTH-A nrPDB 44 3e-05 6CES-C nrPDB 44 5e-05 3T5D-A nrPDB 43 1e-04 4B44-A nrPDB 43 1e-04 4KJZ-A nrPDB 43 1e-04 2ODE-A nrPDB 43 1e-04 3J4J-A nrPDB 42 2e-04 4CSU-9 nrPDB 42 3e-04 2QAG-C nrPDB 41 3e-04 3FTQ-A nrPDB 41 3e-04 5J8B-z nrPDB 41 4e-04 5IMR-C nrPDB 41 4e-04 2YWH-A nrPDB 41 5e-04 2QAG-A nrPDB 41 6e-04 3IZY-P nrPDB 41 6e-04 5IRR-A nrPDB 40 8e-04 1G7S-A nrPDB 40 9e-04 3V00-C nrPDB 40 0.001 6D9H-A nrPDB 39 0.001 1U0L-A nrPDB 39 0.002 1SHZ-A nrPDB 39 0.002 5DN8-A nrPDB 39 0.002 6OIK-A nrPDB 38 0.002 5KH0-A nrPDB 38 0.003 5M04-A nrPDB 38 0.003 3A1W-A nrPDB 38 0.003 3A1U-A nrPDB 38 0.004 4WQY-BZ nrPDB 38 0.005 1ZCB-A nrPDB 37 0.007 4DCU-A nrPDB 37 0.008 1TAG-A nrPDB 37 0.009 6O81-S nrPDB 36 0.010 6FEC-S nrPDB 36 0.010 1ZO1-I nrPDB 36 0.010 3JCN-b nrPDB 36 0.010 5VAI-A nrPDB 36 0.013 5X4B-A nrPDB 36 0.017 1HEY-A nrPDB 36 0.018 4QJ3-A nrPDB 35 0.020 3EC1-A nrPDB 35 0.021 2BCJ-Q nrPDB 35 0.021 4KV9-A nrPDB 35 0.023 1ZCA-A nrPDB 35 0.026 1ZUN-B nrPDB 35 0.027 5H7K-A nrPDB 35 0.030 5H7J-A nrPDB 35 0.030 4FID-A nrPDB 34 0.042 5NON-A nrPDB 34 0.046 2VNE-A nrPDB 34 0.046 2P8Y-T nrPDB 34 0.048 2XTZ-A nrPDB 34 0.050 5TY0-A nrPDB 34 0.055 1PUJ-A nrPDB 34 0.055 6OIJ-A nrPDB 34 0.056 5CYO-A nrPDB 34 0.060 6F1T-i nrPDB 34 0.072 6F1Y-j nrPDB 34 0.073 5AR1-A nrPDB 34 0.073 3R7W-B nrPDB 33 0.10 4Z54-A nrPDB 33 0.11 5OCH-A nrPDB 33 0.11 1UDX-A nrPDB 33 0.11 3P27-A nrPDB 33 0.15 4U00-A nrPDB 33 0.16 3GEE-A nrPDB 33 0.16 3IZQ-1 nrPDB 32 0.18 4AC9-A nrPDB 32 0.19 5EE0-A nrPDB 32 0.19 1YE8-A nrPDB 32 0.21 6NOT-A nrPDB 32 0.22 6HZK-A nrPDB 32 0.24 5I8Q-A nrPDB 32 0.24 6I3O-A nrPDB 32 0.27 1WXQ-A nrPDB 32 0.27 6CS8-A nrPDB 32 0.28 5A9Z-CA nrPDB 31 0.29 4YMS-J nrPDB 31 0.29 4TLD-A nrPDB 31 0.30 2P5T-B nrPDB 31 0.33 1S0U-A nrPDB 31 0.36 2NQL-A nrPDB 31 0.37 5GAD-l nrPDB 31 0.39 3S1A-A nrPDB 31 0.39 2QU8-A nrPDB 31 0.44 1YR7-A nrPDB 31 0.44 4V89-AW nrPDB 31 0.46 3H2Y-A nrPDB 31 0.47 1SUL-A nrPDB 31 0.53 2YYZ-A nrPDB 31 0.58 6F8Z-A nrPDB 31 0.61 2YV5-A nrPDB 30 0.65 3B5X-A nrPDB 30 0.66 1H65-A nrPDB 30 0.67 5B3F-A nrPDB 30 0.68 5C78-A nrPDB 30 0.70 6H7G-A nrPDB 30 0.74 4N1A-A nrPDB 30 0.74 5IDV-A nrPDB 30 0.76 2GZA-A nrPDB 30 0.80 2OUK-A nrPDB 30 0.83 5GM6-Y nrPDB 30 0.85 5Z1X-A nrPDB 30 0.91 1JAL-A nrPDB 30 0.93 2QAG-B nrPDB 30 0.95 3FVQ-A nrPDB 30 0.98 3J81-k nrPDB 30 0.99 2IYT-A nrPDB 30 1.0 3WBG-A nrPDB 30 1.1 6QUZ-B nrPDB 29 1.1 4A9A-A nrPDB 29 1.1 6C2V-A nrPDB 29 1.2 6G12-A nrPDB 29 1.2 6AQ1-A nrPDB 29 1.2 3DEF-A nrPDB 29 1.2 3LLM-A nrPDB 29 1.3 2PJZ-A nrPDB 29 1.3 1Z6G-A nrPDB 29 1.4 5JSZ-B nrPDB 29 1.4 2OHF-A nrPDB 29 1.4 6HA8-V nrPDB 29 1.5 3V9H-A nrPDB 29 1.5 2ZBL-A nrPDB 29 1.6 1R6B-X nrPDB 29 1.6 5ZLU-EE nrPDB 29 1.6 6N0I-A nrPDB 29 1.7 2WJG-A nrPDB 29 1.7 4Q7L-A nrPDB 29 1.7 2KHQ-A nrPDB 29 1.7 6GUA-A nrPDB 29 1.8 5OWV-A nrPDB 29 1.9 3ZJC-A nrPDB 29 1.9 4MYH-A nrPDB 29 2.0 6FA9-A nrPDB 29 2.0 5MKK-A nrPDB 29 2.0 1K1G-A nrPDB 29 2.2 5VHD-D nrPDB 29 2.3 4RY2-A nrPDB 28 2.4 5TV2-A nrPDB 28 2.5 6HCM-k1 nrPDB 28 2.5 5MRE-WW nrPDB 28 2.5 5K1B-B nrPDB 28 2.6 4QIW-C nrPDB 28 2.6 5LKM-A nrPDB 28 2.6 2RGK-A nrPDB 28 2.6 5D0U-A nrPDB 28 2.7 6G2G-A nrPDB 28 2.7 4V7D-BZ nrPDB 28 2.8 6BK7-A nrPDB 28 2.8 5D4W-A nrPDB 28 2.8 2WJI-A nrPDB 28 2.8 3VX4-A nrPDB 28 3.1 3PV0-A nrPDB 28 3.4 2P65-A nrPDB 28 3.6 5CA8-A nrPDB 28 3.9 5KST-A nrPDB 28 4.3 4MJX-A nrPDB 28 4.3 4IXM-A nrPDB 28 4.5 6B9O-A nrPDB 27 5.4 2XUA-A nrPDB 27 5.5 2WIC-A nrPDB 27 7.9 >4CZ2-A nrPDB Length = 230 Score = 296 bits (759), Expect = 4e-81, Method: Composition-based stats. Identities = 201/206 (97%), Positives = 204/206 (99%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL Sbjct: 25 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 84 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WDIAG ERFGNMTRVYYKEA+GAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV Sbjct: 85 WDIAGLERFGNMTRVYYKEAMGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSF 199 LLANKCDQNKDSS SPSQ+DQFCKEHGFAGWFETSAKDNINIEEAARFLVEK+LVNHQSF Sbjct: 145 LLANKCDQNKDSSMSPSQMDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKMLVNHQSF 204 Query: 200 PNEENDVDKIKLDQETLRAENKSQCC 225 PNEENDVDKIKLDQETLRAENKSQCC Sbjct: 205 PNEENDVDKIKLDQETLRAENKSQCC 230 >5SZJ-A nrPDB Length = 202 Score = 265 bits (679), Expect = 9e-72, Method: Composition-based stats. Identities = 76/208 (36%), Positives = 119/208 (57%), Gaps = 9/208 (4%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 A +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++L Sbjct: 4 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKL 62 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 Q+WD AGQERF +T YY+ A+G +V+DI+ +FE + KW ++D + Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA----NEDVE 118 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 +LL NKCD + + +Q +EHG +FETSAK NINIE+A L E IL + Sbjct: 119 RMLLGNKCDMDDKRVVPKGKGEQIAREHGI-RFFETSAKANINIEKAFLTLAEDIL---R 174 Query: 198 SFPNEENDVDKIKLDQETLRAENKSQCC 225 P +E + + + + KS+CC Sbjct: 175 KTPVKEPNSENVDISSGGGVTGWKSKCC 202 >6FF8-A nrPDB Length = 181 Score = 254 bits (650), Expect = 2e-68, Method: Composition-based stats. Identities = 178/181 (98%), Positives = 179/181 (98%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 + ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL Sbjct: 1 SMETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 60 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 QLWDIAG ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP Sbjct: 61 QLWDIAGLERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 120 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ Sbjct: 121 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 180 Query: 198 S 198 S Sbjct: 181 S 181 >5FBL-B nrPDB Length = 221 Score = 245 bits (626), Expect = 1e-65, Method: Composition-based stats. Identities = 71/225 (31%), Positives = 120/225 (53%), Gaps = 16/225 (7%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 G + + ++LFKV++IG+ GVGK++++ R+ F+ ++TIGV+FA + + Sbjct: 1 GAMGSMGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQV 60 Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 D +T ++ Q+WD AGQER+ +T YY+ AVGA +V+DI++ T+E V +W +L Sbjct: 61 DGKT-IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD 119 Query: 130 LPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLV 189 S I +L+ NK D + + F +++G + ETSA D+ N+E A + ++ Sbjct: 120 ----SNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGL-SFIETSALDSTNVEAAFQTIL 174 Query: 190 EKIL---VNHQSFPNEENDV------DKIKLDQETLRAENKSQCC 225 +I Q END+ I + T + K QCC Sbjct: 175 TEIYRIVSQKQMSDRRENDMSPSNNVVPIHVP-PTTENKPKVQCC 218 >2IEZ-A nrPDB Length = 220 Score = 239 bits (611), Expect = 6e-64, Method: Composition-based stats. Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 20/218 (9%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT-------- 73 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + +D++ Sbjct: 8 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKA 67 Query: 74 -LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 V LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 68 FKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 127 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 VL+ NK D + Q + +++G +FETSA N+E++ L++ I Sbjct: 128 PD---IVLIGNKADLPDQREVNERQARELAEKYGIP-YFETSAATGQNVEKSVETLLDLI 183 Query: 193 L------VNHQSFPNEENDVDKIKLDQETLRAENKSQC 224 + V P+ N + KLD E AE K C Sbjct: 184 MKRMEKCVEKTQVPDTVNGGNSGKLDGEK-PAEKKCAC 220 >5LPN-A nrPDB Length = 177 Score = 238 bits (608), Expect = 1e-63, Method: Composition-based stats. Identities = 70/178 (39%), Positives = 106/178 (59%), Gaps = 6/178 (3%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 A +T + LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF +K + + ++L Sbjct: 4 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKK-IKL 62 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 Q+WD AGQERF +T YY+ A+G +V+DI+ +FE + KW ++D + Sbjct: 63 QIWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHA----NEDVE 118 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 +LL NKCD + + +Q +EHG +FETSAK NINIE+A L E IL Sbjct: 119 RMLLGNKCDMDDKRVVPKGKGEQIAREHGI-RFFETSAKANINIEKAFLTLAEDILRK 175 >5SZI-A nrPDB Length = 209 Score = 237 bits (605), Expect = 3e-63, Method: Composition-based stats. Identities = 66/212 (31%), Positives = 113/212 (53%), Gaps = 11/212 (5%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 +T ++LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF ++ + D + + Sbjct: 1 GHMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKR-I 59 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 +LQ+WD AGQERF +T YY+ A+G +V+DI+ +F+ + W +++ + Sbjct: 60 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA----SAD 115 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 + ++L NKCD N S + ++ ++G + ETSAK NIN+E A L I Sbjct: 116 VEKMILGNKCDVNDKRQVSKERGEKLALDYGI-KFMETSAKANINVENAFFTLARDIKAK 174 Query: 196 -----HQSFPNEENDVDKIKLDQETLRAENKS 222 + P N KI DQ+ + + Sbjct: 175 MDKKLEGNSPQGSNQGVKITPDQQKRSSFFRC 206 >3L0I-B nrPDB Length = 199 Score = 237 bits (604), Expect = 4e-63, Method: Composition-based stats. Identities = 58/181 (32%), Positives = 100/181 (55%), Gaps = 6/181 (3%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G + ++LFK+L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D Sbjct: 20 GRPMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 79 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 +T ++LQ+WD AGQERF +T YY+ A G VV+D++ +F V +W ++D Sbjct: 80 KT-IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA--- 135 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 + +L+ NKCD + +F G + ETSAK+ N+E++ + + Sbjct: 136 -SENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAE 193 Query: 192 I 192 I Sbjct: 194 I 194 >2RHD-A nrPDB Length = 175 Score = 236 bits (603), Expect = 6e-63, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 102/176 (57%), Gaps = 6/176 (3%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFK+L+IG+ GVGK+ ++ R+ ++ Y +TIGVDF ++ ++ +++T V+LQ+WD Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKT-VKLQIWD 64 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQERF +T YY+ A G +V+D++ +F+ V +W ++D + +L+ Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYA----MENVNKLLV 120 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 NKCD + + + HG + ETSAK+ N+E+A + +I Q Sbjct: 121 GNKCDLVSKRVVTSDEGRELADSHGI-KFIETSAKNAYNVEQAFHTMAGEIKKRVQ 175 >5SZH-B nrPDB Length = 203 Score = 236 bits (602), Expect = 7e-63, Method: Composition-based stats. Identities = 62/206 (30%), Positives = 108/206 (52%), Gaps = 11/206 (5%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFK+L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ+WD Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQIWD 65 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQERF +T YY+ A G VV+D++ ++ V +W ++D + +L+ Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYA----SENVNKLLV 121 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPN 201 NK D + +F G + ETSAK+ N+E+A + +I + P Sbjct: 122 GNKSDLTTKKVVDNTTAKEFADSLGIP-FLETSAKNATNVEQAFMTMAAEI--KKRMGPG 178 Query: 202 EENDVD--KIKLDQETLRAENKSQCC 225 + + +K+D T CC Sbjct: 179 AASGGERPNLKIDS-TPVKPAGGGCC 203 >4LHX-A nrPDB Length = 186 Score = 234 bits (598), Expect = 2e-62, Method: Composition-based stats. Identities = 60/177 (33%), Positives = 103/177 (58%), Gaps = 6/177 (3%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 +T ++LFK+L+IG+ GVGKT ++ R+ F+ + +TIG+DF ++ + D + + Sbjct: 1 GHMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKR-I 59 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 +LQ+WD AGQERF +T YY+ A+G +V+DI+ +F+ + W +++ + Sbjct: 60 KLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHA----SAD 115 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + ++L NKCD N S + ++ ++G + ETSAK NIN+E A L I Sbjct: 116 VEKMILGNKCDVNDKRQVSKERGEKLALDYGI-KFMETSAKANINVENAFFTLARDI 171 >6IYB-A nrPDB Length = 199 Score = 234 bits (597), Expect = 3e-62, Method: Composition-based stats. Identities = 65/201 (32%), Positives = 107/201 (53%), Gaps = 3/201 (1%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 +A + ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF K + D R Sbjct: 1 GSAMGSTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR 60 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 LV +Q+WD AG ERF + +Y+ A +VFD++ +TF+ + W+ + + + Sbjct: 61 -LVTMQIWDTAGLERFQS-GVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRD 118 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 P V+L NK D + + +C +FETSAK+ IN+E+A + + Sbjct: 119 PENFPFVVLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNA 177 Query: 193 LVNHQSFPNEENDVDKIKLDQ 213 L + IKLD+ Sbjct: 178 LKQETEVELYNEFPEPIKLDK 198 >5LDD-C nrPDB Length = 207 Score = 234 bits (596), Expect = 3e-62, Method: Composition-based stats. Identities = 69/208 (33%), Positives = 114/208 (54%), Gaps = 8/208 (3%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ++ L KV+++G+ GVGKTS++ +YV++ FS Y+ATIG DF + + D R V +QL Sbjct: 5 SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQ-VTMQL 63 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD AGQERF ++ +Y+ A +VFD++ + +F+A+ W+ + + + P V Sbjct: 64 WDTAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFV 123 Query: 140 LLANKCDQNK-DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 +L K D + S + FC+ G +FETSAK+ IN+EEA + + L+ +S Sbjct: 124 VLGIKIDVEESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEES 183 Query: 199 --FPNEENDVDKIKLDQETLRAENKSQC 224 F + D I ++ E + C Sbjct: 184 EEFSGDFQDPINIHIENER----DGCAC 207 >1YZN-A nrPDB Length = 185 Score = 233 bits (595), Expect = 4e-62, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 97/180 (53%), Gaps = 6/180 (3%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 + P ++LFK+L+IG GVGK+ ++ R+ ++ Y +TIGVDF +K + D + Sbjct: 9 GSLVPRGSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGK 68 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 T V+LQ+WD AGQERF +T YY+ + G +V+D++ +F V W ++D Sbjct: 69 T-VKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA---- 123 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 S + +L+ NKCD +F + + ETSA D+ N+E+A + +I Sbjct: 124 TSTVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMP-FLETSALDSTNVEDAFLTMARQI 182 >1Z0A-A nrPDB Length = 174 Score = 233 bits (594), Expect = 6e-62, Method: Composition-based stats. Identities = 60/180 (33%), Positives = 97/180 (53%), Gaps = 6/180 (3%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 P +LFK ++IG+ GVGK+ ++ ++ + F + TIGV+F +++ D + + Sbjct: 1 GPLGSAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQ-I 59 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 +LQ+WD AGQE F ++TR YY+ A GA +V+DI+R TF + W D + S Sbjct: 60 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQH----SNSN 115 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 + +L+ NK D + + F +EHG + ETSAK N+EEA ++I Sbjct: 116 MVIMLIGNKSDLESRREVKKEEGEAFAREHGLI-FMETSAKTASNVEEAFINTAKEIYEK 174 >2A5J-A nrPDB Length = 191 Score = 231 bits (589), Expect = 2e-61, Method: Composition-based stats. Identities = 61/178 (34%), Positives = 98/178 (55%), Gaps = 6/178 (3%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 +LFK ++IG+ GVGK+ ++ ++ + F + TIGV+F +++N D + ++LQ+W Sbjct: 17 RGSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQ-IKLQIW 75 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQE F ++TR YY+ A GA +V+DI+R TF + W D + S + +L Sbjct: 76 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQH----SSSNMVIML 131 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 + NK D + + F +EHG + ETSAK N+EEA ++I Q Sbjct: 132 IGNKSDLESRRDVKREEGEAFAREHGLI-FMETSAKTACNVEEAFINTAKEIYRKIQQ 188 >3CUE-F nrPDB Length = 206 Score = 230 bits (587), Expect = 3e-61, Method: Composition-based stats. Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 12/211 (5%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ++LFK+L+IG GVGK+ ++ R+ ++ Y +TIGVDF +K + D +T V+LQ+ Sbjct: 3 SEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKT-VKLQI 61 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD AGQERF +T YY+ + G +V+D++ +F V W ++D S + + Sbjct: 62 WDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA----TSTVLKL 117 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI-----LV 194 L+ NKCD +F + + ETSA D+ N+E+A + +I Sbjct: 118 LVGNKCDLKDKRVVEYDVAKEFADANKMP-FLETSALDSTNVEDAFLTMARQIKESMSQQ 176 Query: 195 NHQSFPNEENDVDKIKLDQETLRAENKSQCC 225 N ++ D + L ++L CC Sbjct: 177 NLNETTQKKEDKGNVNLKGQSL-TNTGGGCC 206 >2F9L-A nrPDB Length = 199 Score = 230 bits (586), Expect = 5e-61, Method: Composition-based stats. Identities = 62/192 (32%), Positives = 107/192 (55%), Gaps = 9/192 (4%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFKV++IG+ GVGK++++ R+ F+ ++TIGV+FA + + D +T ++ Q+WD Sbjct: 2 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 60 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQER+ +T YY+ AVGA +V+DI++ T+E V +W +L S I +L+ Sbjct: 61 TAGQERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLV 116 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL---VNHQS 198 NK D + + F +++ + ETSA D+ N+EEA + ++ +I Q Sbjct: 117 GNKSDLRHLRAVPTDEARAFAEKNNL-SFIETSALDSTNVEEAFKNILTEIYRIVSQKQI 175 Query: 199 FPNEENDVDKIK 210 +D Sbjct: 176 ADRAAHDESPGN 187 >1Z0F-A nrPDB Length = 179 Score = 229 bits (585), Expect = 7e-61, Method: Composition-based stats. Identities = 60/182 (32%), Positives = 101/182 (55%), Gaps = 6/182 (3%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 +A AP ++FK ++IG++GVGK+ ++ ++ + F TIGV+F +++ + Sbjct: 4 GSATAPYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 63 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 ++LQ+WD AGQERF +TR YY+ A GA +V+DI+R ST+ + W +D + + Sbjct: 64 -IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNP--- 119 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +L+ NK D + + QF +E+G + E SAK N+E+A +KI Sbjct: 120 -NTVIILIGNKADLEAQRDVTYEEAKQFAEENGLL-FLEASAKTGENVEDAFLEAAKKIY 177 Query: 194 VN 195 N Sbjct: 178 QN 179 >2WWX-A nrPDB Length = 175 Score = 229 bits (584), Expect = 8e-61, Method: Composition-based stats. Identities = 56/171 (32%), Positives = 97/171 (56%), Gaps = 6/171 (3%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFK+L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ+WD Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQIWD 63 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQERF +T YY+ A G VV+D++ +F V +W ++D + +L+ Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA----SENVNKLLV 119 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 KCD + +F G + ETSAK+ N+E++ + +I Sbjct: 120 GIKCDLTTKKVVDYTTAKEFADSLGIP-FLETSAKNATNVEQSFMTMAAEI 169 >4UJ4-A nrPDB Length = 185 Score = 228 bits (583), Expect = 1e-60, Method: Composition-based stats. Identities = 61/185 (32%), Positives = 105/185 (56%), Gaps = 9/185 (4%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFKV++IG+ GVGK++++ R+ F+ ++TIGV+FA + + D +T ++ Q+WD Sbjct: 7 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKT-IKAQIWD 65 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AG ER+ +T YY+ AVGA +V+DI++ T+E V +W +L S I +L+ Sbjct: 66 TAGLERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLV 121 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL---VNHQS 198 NK D + + F +++G + ETSA D+ N+E A + ++ +I Q Sbjct: 122 GNKSDLRHLRAVPTDEARAFAEKNGL-SFIETSALDSTNVEAAFQTILTEIYRIVSQKQM 180 Query: 199 FPNEE 203 E Sbjct: 181 SDRRE 185 >2HUP-A nrPDB Length = 201 Score = 227 bits (578), Expect = 4e-60, Method: Composition-based stats. Identities = 67/192 (34%), Positives = 109/192 (56%), Gaps = 14/192 (7%) Query: 5 GAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL 64 G+GDP E + LFK++++G+ VGKT +++R+ FS+ +TIGVDF + Sbjct: 18 GSGDP---------DEQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTM 68 Query: 65 KVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDL 124 K L + V+LQ+WD AGQERF +T+ YY+ A GA + +DI++ S+F +V W D+ Sbjct: 69 KTLEIQGKR-VKLQIWDTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDV 127 Query: 125 DSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 GS I +L+ NK D ++ S ++ + + ETSAKD+ N+EEA Sbjct: 128 RKYA----GSNIVQLLIGNKSDLSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEA 183 Query: 185 ARFLVEKILVNH 196 + ++++ H Sbjct: 184 FLRVATELIMRH 195 >4RKE-A nrPDB Length = 176 Score = 225 bits (574), Expect = 1e-59, Method: Composition-based stats. Identities = 58/177 (32%), Positives = 98/177 (55%), Gaps = 6/177 (3%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 + +LFK ++IG+ GVGK+ ++ ++ + F + TIGV+F +++ D + ++LQ+W Sbjct: 6 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQ-IKLQIW 64 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AG E F ++TR YY+ A GA +V+DI+R TF + W D + S + +L Sbjct: 65 DTAGLEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQH----SNSNMVIML 120 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 + NK D + + + F +EHG + ETSA+ N+EEA ++I Q Sbjct: 121 IGNKSDLDSRREVKKEEGEAFAREHGLV-FMETSARTAANVEEAFINTAKEIYEKIQ 176 >3BFK-A nrPDB Length = 181 Score = 225 bits (573), Expect = 1e-59, Method: Composition-based stats. Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 5/183 (2%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA K + + +++ Q+WD Sbjct: 4 YDYLFKIVLIGDSGVGKSNLLSRFTRDEFNLESKSTIGVEFATKSIQLKNNKIIKAQIWD 63 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQER+ +T YY+ AVGA +V+DI++ ++FE + KW +L S I +L+ Sbjct: 64 TAGQERYRAITSAYYRGAVGALLVYDITKKNSFENIEKWLKELRDNAD----SNIVILLV 119 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPN 201 NK D + + Q+ K+ A + ETSA + N+E A L+ +I Q Sbjct: 120 GNKSDLKHLRVINDNDATQYAKKEKLA-FIETSALEATNVELAFHQLLNEIYNVRQKKQA 178 Query: 202 EEN 204 +N Sbjct: 179 TKN 181 >2GF9-A nrPDB Length = 189 Score = 225 bits (573), Expect = 2e-59, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 98/175 (56%), Gaps = 6/175 (3%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 P +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + ++L Sbjct: 15 VPRGSDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKR-IKL 73 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 Q+WD AGQER+ +T YY+ A+G +++DI+ +F AV W + + + + Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTY----SWDNAQ 129 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NKCD + + + GF +FE SAK+NIN+++ LV+ I Sbjct: 130 VILVGNKCDLEDERVVPAEDGRRLADDLGF-EFFEASAKENINVKQVFERLVDVI 183 >2OCB-A nrPDB Length = 180 Score = 225 bits (573), Expect = 2e-59, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 2/182 (1%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 + L KV+++G+ GVGK+S++ RYV F TIGV+F + L D R V LQ Sbjct: 1 GSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGR-FVTLQ 59 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD AGQERF ++ +Y+ A + F + +FE + W+ + + + P Sbjct: 60 IWDTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPF 119 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 V+L NK D +D + + +C E+G + ETSAKD+ N+ A V ++L + Sbjct: 120 VVLGNKVD-KEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQ 178 Query: 199 FP 200 Sbjct: 179 LE 180 >2BMD-A nrPDB Length = 186 Score = 224 bits (572), Expect = 2e-59, Method: Composition-based stats. Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 6/191 (3%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 ET + LFK LVIG G GK+ ++ +++ + F TIGV+F K++N + V Sbjct: 1 GHMSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGK-YV 59 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 +LQ+WD AGQERF ++TR YY+ A GA +V+DI+ T+ A+ W +D + Sbjct: 60 KLQIWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD----ARMLASQN 115 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 I +L NK D + D + + +F +E+ + ETSA N+EEA KIL Sbjct: 116 IVIILCGNKKDLDADREVTFLEASRFAQENELM-FLETSALTGENVEEAFVQCARKILNK 174 Query: 196 HQSFPNEENDV 206 +S + + Sbjct: 175 IESGELDPERM 185 >2F7S-A nrPDB Length = 217 Score = 224 bits (572), Expect = 2e-59, Method: Composition-based stats. Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 20/209 (9%) Query: 14 AAAPAPET-REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 P ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + ++++ Sbjct: 13 GLVPRGSGDYDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQ 72 Query: 73 TL---------VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSD 123 V LQLWD AGQERF ++T ++++A+G ++FD++ +F V W S Sbjct: 73 GPNGSSGKAFKVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQ 132 Query: 124 LDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 L + + N VL+ NK D + Q + ++G +FETSA N+E+ Sbjct: 133 LQANAYCENPD---IVLIGNKADLPDQREVNERQARELADKYGIP-YFETSAATGQNVEK 188 Query: 184 AARFLVEKIL------VNHQSFPNEENDV 206 A L++ I+ V P+ N Sbjct: 189 AVETLLDLIMKRMEQCVEKTQIPDTVNGG 217 >4RKF-A nrPDB Length = 190 Score = 224 bits (571), Expect = 2e-59, Method: Composition-based stats. Identities = 61/191 (31%), Positives = 103/191 (53%), Gaps = 8/191 (4%) Query: 2 AGGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVD 61 A GDP AA + +++FK+L+IG VGKTS + RY F+ + +T+G+D Sbjct: 2 AMASGGDPKWQKDAAD--QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGID 59 Query: 62 FALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWK 121 F +K + + V+LQ+WD AG ER+ +T YY+ A+G +++D++ +F +V W Sbjct: 60 FKVKTVFRHDKR-VKLQIWDTAGLERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWV 118 Query: 122 SDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINI 181 + + + + +L+ NKCD S + Q + G +FETSAK+N+N+ Sbjct: 119 TQIKTY----SWDNAQVILVGNKCDMEDQRVISFERGRQLADQLGV-EFFETSAKENVNV 173 Query: 182 EEAARFLVEKI 192 + LV+ I Sbjct: 174 KAVFERLVDII 184 >4QXA-A nrPDB Length = 208 Score = 223 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 59/180 (32%), Positives = 93/180 (51%), Gaps = 2/180 (1%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 + LFK++++G+ GVGK+S++ RYV F TIGV+F K L D V +Q+W Sbjct: 4 GKSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGH-FVTMQIW 62 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AG ERF ++ +Y+ + + F + S +F+ + WK + + P V+ Sbjct: 63 DTAGLERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVI 122 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFP 200 L NK D K+ S + +CK++G +FETSAKD+ N+ A V +IL Sbjct: 123 LGNKTDI-KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSE 181 >1WMS-A nrPDB Length = 177 Score = 223 bits (570), Expect = 3e-59, Method: Composition-based stats. Identities = 58/176 (32%), Positives = 93/176 (52%), Gaps = 2/176 (1%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 + LFKV+++G+ GVGK+S++ RYV F TIGV+F K L D V +Q+W Sbjct: 3 GKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGH-FVTMQIW 61 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQERF ++ +Y+ + + F + S +F+ + WK + + P V+ Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVI 121 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNH 196 L NK D + + S + +C+++G +FETSAKD N+ A V ++L Sbjct: 122 LGNKIDIS-ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176 >2G6B-A nrPDB Length = 180 Score = 223 bits (570), Expect = 4e-59, Method: Composition-based stats. Identities = 54/180 (30%), Positives = 100/180 (55%), Gaps = 7/180 (3%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLF-SQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 + FKV+++G+ GVGKT ++ R+ F + + +T+G+DF KVL+ D V+LQ+W Sbjct: 7 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVK-VKLQMW 65 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQERF ++T YY++A +++D++ ++F+ + W +++ H + +L Sbjct: 66 DTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEI----HEYAQHDVALML 121 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFP 200 L NK D + ++ KE+G + ETSAK +N++ A + +++ P Sbjct: 122 LGNKVDSAHERVVKREDGEKLAKEYGLP-FMETSAKTGLNVDLAFTAIAKELKRRSMKAP 180 >3CPH-A nrPDB Length = 213 Score = 223 bits (569), Expect = 5e-59, Method: Composition-based stats. Identities = 56/180 (31%), Positives = 100/180 (55%), Gaps = 7/180 (3%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 +A++ ++ + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + Sbjct: 8 SASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGK 67 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 V+LQLWD AGQERF +T YY+ A+G +V+D++ TF + +W ++ Sbjct: 68 K-VKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA---- 122 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NK D + Q + KE G + E+SAK++ N+ E L + I Sbjct: 123 NDEAQLLLVGNKSDMET-RVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLI 180 >1ZBD-A nrPDB Length = 203 Score = 222 bits (567), Expect = 8e-59, Method: Composition-based stats. Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 7/184 (3%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + + ++LQ+WD Sbjct: 6 DYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKR-IKLQIWDT 64 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG ER+ +T YY+ A+G +++DI+ +F AV W + + + + +L+ Sbjct: 65 AGLERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY----SWDNAQVLLVG 120 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNE 202 NKCD + S + Q GF +FE SAKDNIN+++ LV+ I S + Sbjct: 121 NKCDMEDERVVSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVDVI-CEKMSESLD 178 Query: 203 ENDV 206 D Sbjct: 179 TADP 182 >5XR6-A nrPDB Length = 194 Score = 222 bits (565), Expect = 1e-58, Method: Composition-based stats. Identities = 57/175 (32%), Positives = 98/175 (56%), Gaps = 6/175 (3%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 ++LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA K + + +V+ Sbjct: 18 GSHMYDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGK-VVKA 76 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 Q+WD AGQER+ +T YY+ AVGA +++D++R +TFE +W +L I Sbjct: 77 QIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDP----NIV 132 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NKCD + + F + + ETSA D N+E A ++ +I Sbjct: 133 VMLIGNKCDLRHLVAVKTEEAKAFAERESLY-FMETSALDATNVENAFTEVLTQI 186 >5LEF-A nrPDB Length = 191 Score = 222 bits (565), Expect = 1e-58, Method: Composition-based stats. Identities = 64/188 (34%), Positives = 102/188 (54%), Gaps = 6/188 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++ +GE VGKTS+I R+++ F Y+ATIG+DF K + + RT VRLQLWD AG Sbjct: 10 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGL 68 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ ++F+ KW D+ GS + +L+ NK Sbjct: 69 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDV----RTERGSDVIIMLVGNKT 124 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNEEND 205 D S + ++ KE + ETSAK N+++ R + + + D Sbjct: 125 DLADKRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAALPGMESTQDRSRED 183 Query: 206 VDKIKLDQ 213 + IKL++ Sbjct: 184 MIDIKLEK 191 >6O62-A nrPDB Length = 184 Score = 222 bits (565), Expect = 1e-58, Method: Composition-based stats. Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 6/187 (3%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 + + + + K+L++G+ GVGK+ ++ R+V F+ + TIG+DF ++ + Sbjct: 1 MSGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKG 60 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 + ++LQ+WD AGQERF +T YY+ A+G +++D++ S +FE V W + Sbjct: 61 KR-IKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHA--- 116 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 L+ NKCD + S Q + + + E SAK N N++ L Sbjct: 117 -NEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVP-FLEASAKSNENVDSIFYELASI 174 Query: 192 ILVNHQS 198 I H Sbjct: 175 IQEKHVE 181 >5UB8-A nrPDB Length = 222 Score = 222 bits (565), Expect = 1e-58, Method: Composition-based stats. Identities = 59/193 (30%), Positives = 104/193 (53%), Gaps = 6/193 (3%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 E+L+K+++IG+ GVGK++++ R+ F+ R+TIGV+FA + L D + V+ Q+WD Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKR-VKAQIWD 70 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AGQER+ +T YY+ AVGA +V+DI+++ ++E+V +W +L + I L+ Sbjct: 71 TAGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHAD----ANIIIELV 126 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPN 201 NK D + + + F E+ + E SA + N++ + L++ I Sbjct: 127 GNKSDLDHLRAVPTEEAKNFAMENNLL-FTEASALSSDNVDLSFHQLLKNIYEMISKHQL 185 Query: 202 EENDVDKIKLDQE 214 E ND + Sbjct: 186 ENNDSKQTNTAGG 198 >3RAB-A nrPDB Length = 169 Score = 221 bits (564), Expect = 2e-58, Method: Composition-based stats. Identities = 59/172 (34%), Positives = 99/172 (57%), Gaps = 6/172 (3%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + + ++LQ+W Sbjct: 1 NFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKR-IKLQIW 59 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQER+ +T YY+ A+G +++DI+ +F AV W + + + + +L Sbjct: 60 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTY----SWDNAQVLL 115 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + NKCD + S + Q GF +FE SAKDNIN+++ LV+ I Sbjct: 116 VGNKCDMEDERVVSSERGRQLADHLGF-EFFEASAKDNINVKQTFERLVDVI 166 >4PHF-A nrPDB Length = 184 Score = 221 bits (564), Expect = 2e-58, Method: Composition-based stats. Identities = 58/184 (31%), Positives = 100/184 (54%), Gaps = 1/184 (0%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 ++++ KV+++G+ GVGKTS++ RYV+ +S Y+ATIG DF K + D + Sbjct: 1 GHMSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSCQYKATIGADFLTKEVTVDGDKVA 60 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 +Q+WD AGQERF ++ +Y+ A +V+D++ +S+FE + W+ + ++ + Sbjct: 61 TMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPET 120 Query: 136 IPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 P V+L NK D + S + K G F TSAK+ IN++ A + L Sbjct: 121 FPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 180 Query: 195 NHQS 198 +Q+ Sbjct: 181 QNQA 184 >2O52-A nrPDB Length = 200 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 66/194 (34%), Positives = 103/194 (53%), Gaps = 16/194 (8%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + LFK LVIG G GK+ ++ +++ F Q TIGV+F +V+N +T V+LQ+WD Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKT-VKLQIWDT 81 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF ++TR YY+ A GA +V+DI+ T+ ++ W +D + I +L Sbjct: 82 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASP----NIVVILCG 137 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNE 202 NK D + + + + +F +E+ + ETSA N+EEA IL Sbjct: 138 NKKDLDPEREVTFLEASRFAQENELM-FLETSALTGENVEEAFLKCARTIL--------- 187 Query: 203 ENDVDKIKLDQETL 216 N +D +LD E + Sbjct: 188 -NKIDSGELDPERM 200 >6IF2-B nrPDB Length = 186 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 7/186 (3%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G + +HLFK+L+IG+ GVGK+S++ R+ FS Y TIGVDF ++ + + Sbjct: 1 GPGSEFMARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEING 60 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 V+LQ+WD AG ERF +T YY+ G VV+D++ + +F V +W +++ Sbjct: 61 EK-VKLQIWDTAGLERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-- 117 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 + +L+ NK D + +F + G + ETSAK+N+N+EE + E Sbjct: 118 ---DVCRILVGNKNDDPERKVVETEDAYKFAGQMGIQLF-ETSAKENVNVEEMFNCITEL 173 Query: 192 ILVNHQ 197 +L + Sbjct: 174 VLRAKK 179 >3DZ8-A nrPDB Length = 191 Score = 221 bits (563), Expect = 2e-58, Method: Composition-based stats. Identities = 57/173 (32%), Positives = 99/173 (57%), Gaps = 6/173 (3%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 +++FK+L+IG VGKTS + RY F+ + +T+G+DF +K + + V+LQ+ Sbjct: 18 GNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTV-YRHEKRVKLQI 76 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD AGQER+ +T YY+ A+G +++DI+ +F AV W + + + + + Sbjct: 77 WDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTY----SWDNAQVI 132 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 L+ NKCD ++ + ++ GF +FE SAK+NI++ +A LV+ I Sbjct: 133 LVGNKCDMEEERVVPTEKGQLLAEQLGF-DFFEASAKENISVRQAFERLVDAI 184 >2IL1-A nrPDB Length = 192 Score = 219 bits (558), Expect = 9e-58, Method: Composition-based stats. Identities = 62/184 (33%), Positives = 101/184 (54%), Gaps = 5/184 (2%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G +P + +V++IG GVGKTS+++R+ F + ++T+GVDF +K + Sbjct: 13 GLVPRGSPRPADFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG 72 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 + +RLQ+WD AGQERF ++T YY+ A G +V+DI++ TF+ + KW +D Sbjct: 73 KK-IRLQIWDTAGQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYA--- 128 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 +L+ NK D D + Q ++F ++ + E SAKDN N++E LV+ Sbjct: 129 -SEDAELLLVGNKLDCETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDD 187 Query: 192 ILVN 195 IL Sbjct: 188 ILKK 191 >2EW1-A nrPDB Length = 201 Score = 218 bits (557), Expect = 1e-57, Method: Composition-based stats. Identities = 58/193 (30%), Positives = 102/193 (52%), Gaps = 6/193 (3%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G + E + LFK+++IG GVGKT +++R+ LF ATIGVDF +K + + Sbjct: 13 GLVPRGSMEDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEING 72 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 V+LQ+WD AGQERF ++T+ YY+ A + +DI+ +F + +W +++ Sbjct: 73 EK-VKLQIWDTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYA--- 128 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 + + VL+ NK D + S + ++F + + ETSAK++ N+E+ L + Sbjct: 129 -SNKVITVLVGNKIDLAERREVSQQRAEEFSEAQDMY-YLETSAKESDNVEKLFLDLACR 186 Query: 192 ILVNHQSFPNEEN 204 ++ + N Sbjct: 187 LISEARQNTLVNN 199 >3CPJ-B nrPDB Length = 223 Score = 218 bits (556), Expect = 2e-57, Method: Composition-based stats. Identities = 57/182 (31%), Positives = 101/182 (55%), Gaps = 6/182 (3%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 ++ + LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA + L + + Sbjct: 2 SSEDYGYDYDLLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIEGKR 61 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 ++ Q+WD AGQER+ +T YY+ AVGA +V+DIS+SS++E W S+L Sbjct: 62 -IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENAD---- 116 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 + L+ NK D + + F +E+ + ETSA ++ N+++A L+ I Sbjct: 117 DNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLL-FTETSALNSENVDKAFEELINTIY 175 Query: 194 VN 195 Sbjct: 176 QK 177 >2OCY-C nrPDB Length = 170 Score = 217 bits (553), Expect = 3e-57, Method: Composition-based stats. Identities = 55/170 (32%), Positives = 94/170 (55%), Gaps = 7/170 (4%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + + K+L+IG+ GVGK+ ++ R+V F+ + TIG+DF +K ++ + + V+LQLWD Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKK-VKLQLWDT 59 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AGQERF +T YY+ A+G +V+D++ TF + +W ++ +L+ Sbjct: 60 AGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHA----NDEAQLLLVG 115 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 NK D + Q + KE G + E+SAK++ N+ E L + I Sbjct: 116 NKSDMET-RVVTADQGEALAKELGIP-FIESSAKNDDNVNEIFFTLAKLI 163 >2IEY-A nrPDB Length = 195 Score = 217 bits (553), Expect = 3e-57, Method: Composition-based stats. Identities = 56/183 (30%), Positives = 98/183 (53%), Gaps = 13/183 (7%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT-------- 73 ++L K+L +G+ GVGKT+ + RY F+ + T+G+DF K + +D++ Sbjct: 8 YDYLIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYDTQGADGASGKA 67 Query: 74 -LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 V LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 68 FKVHLQLWDTAGLERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCEN 127 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 VL+ NK D + Q + +++G +FETSA N+E++ L++ I Sbjct: 128 PD---IVLIGNKADLPDQREVNERQARELAEKYGIP-YFETSAATGQNVEKSVETLLDLI 183 Query: 193 LVN 195 + Sbjct: 184 MKR 186 >2G77-B nrPDB Length = 198 Score = 216 bits (550), Expect = 6e-57, Method: Composition-based stats. Identities = 58/187 (31%), Positives = 92/187 (49%), Gaps = 9/187 (4%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 + A+ P R +FK++VIG+ VGKT + R+ F ATIGVDF + ++ Sbjct: 14 AVSGASGCLPPARSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDI 73 Query: 70 DSRTLVRLQLWDIAGQERFG-NMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKV 128 D +++QLWD AGQERF +M + YY+ V+D++ ++F ++ W + + Sbjct: 74 DGER-IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHL 132 Query: 129 HLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK---DNINIEEAA 185 + IP +L+ NKCD +F H + ETSAK DN ++E Sbjct: 133 ---LANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLF-ETSAKNPNDNDHVEAIF 188 Query: 186 RFLVEKI 192 L K+ Sbjct: 189 MTLAHKL 195 >6HUF-A nrPDB Length = 182 Score = 216 bits (550), Expect = 7e-57, Method: Composition-based stats. Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 6/187 (3%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 + ++L K L +G+ GVGKTS++ +Y F+ + T+G+DF K + + + ++ Sbjct: 1 GSDGDYDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKTIYRNDKR-IK 59 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + + N Sbjct: 60 LQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEESFLNVRNWISQLKTHAYSENPD-- 117 Query: 137 PAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN- 195 VL NK D + + ++ Q + +G +FETSA + NI +A L++ I+ Sbjct: 118 -IVLCGNKSDLEDERVVAAAEARQLAEHYGIP-YFETSAANGTNISQAIEMLLDLIMKRM 175 Query: 196 HQSFPNE 202 +S Sbjct: 176 ERSVDKS 182 >3TSO-A nrPDB Length = 178 Score = 213 bits (543), Expect = 4e-56, Method: Composition-based stats. Identities = 59/176 (33%), Positives = 97/176 (55%), Gaps = 6/176 (3%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 E +FKV++IGE GVGKT+++ R+ FS R TIGV+F+ + + V+ Q+ Sbjct: 5 EDYNFVFKVVLIGESGVGKTNLLSRFTRNEFSHDSRTTIGVEFSTRTVML-GTAAVKAQI 63 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD AG ER+ +T YY+ AVGA +VFD+++ T+ V +W +L + I + Sbjct: 64 WDTAGLERYRAITSAYYRGAVGALLVFDLTKHQTYAVVERWLKELYDHAE----ATIVVM 119 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 L+ NK D ++ + F + +G + ETSA D+ N+E A ++++I Sbjct: 120 LVGNKSDLSQAREVPTEEARMFAENNGLL-FLETSALDSTNVELAFETVLKEIFAK 174 >3RWM-B nrPDB Length = 185 Score = 212 bits (541), Expect = 8e-56, Method: Composition-based stats. Identities = 55/174 (31%), Positives = 100/174 (57%), Gaps = 6/174 (3%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 ++LFK+++IG+ GVGK++++ R+ F+ ++TIGV+FA + + +++ ++ Q+WD Sbjct: 7 YDYLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKK-IKAQIWD 65 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 AG ER+ +T YY+ AVGA +V+DIS+SS++E W ++L + L+ Sbjct: 66 TAGLERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENAD----DNVAVGLI 121 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 NK D + + F E+ + ETSA ++ N+++A R L+ I Sbjct: 122 GNKSDLAHLRAVPTDEAKNFAMENQML-FTETSALNSDNVDKAFRELIVAIFQM 174 >1X3S-A nrPDB Length = 195 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 61/197 (30%), Positives = 103/197 (52%), Gaps = 6/197 (3%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 + ++ E K+L+IGE GVGK+S++ R+ F ATIGVDF +K ++ D Sbjct: 2 SSGSSGMDEDVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDG 61 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 +L +WD AGQERF +T YY+ A G +V+D++R TF + W ++L++ Sbjct: 62 NKA-KLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYC--- 117 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 + I +L+ NK D ++ ++ +F ++H + E SAK ++ A LVEK Sbjct: 118 TRNDIVNMLVGNKID-KENREVDRNEGLKFARKHSML-FIEASAKTCDGVQCAFEELVEK 175 Query: 192 ILVNHQSFPNEENDVDK 208 I+ + +E + Sbjct: 176 IIQTPGLWESENQNSGP 192 >1TU4-A nrPDB Length = 171 Score = 212 bits (539), Expect = 1e-55, Method: Composition-based stats. Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 6/170 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++GE VGK+S++ R+V F + +TIG F + + D T V+ ++WD AGQ Sbjct: 8 FKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGQ 66 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ER+ ++ +YY+ A A VV+DI+ +F W +L + I L NK Sbjct: 67 ERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIALSGNKA 122 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 D + + + ++ + ETSAK ++N+ E + +K+ N Sbjct: 123 DLANKRAVDFQEAQSYADDNSLL-FMETSAKTSMNVNEIFMAIAKKLPKN 171 >4G01-B nrPDB Length = 181 Score = 212 bits (539), Expect = 2e-55, Method: Composition-based stats. Identities = 49/179 (27%), Positives = 92/179 (51%), Gaps = 6/179 (3%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 + A + K++++G++G GK+S++ R+V F + +TIG F + L + T Sbjct: 1 GSMAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDAT 60 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 V+ ++WD AGQER+ ++ +YY+ A A +VFD++ ++FE KW +L ++ Sbjct: 61 -VKFEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQAQ----GN 115 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + L NK D + + +E+G + ETSAK N++E + ++ Sbjct: 116 PNMVMALAGNKSDLLDARKVTAEDAQTYAQENGLF-FMETSAKTATNVKEIFYEIARRL 173 >1Z06-A nrPDB Length = 189 Score = 211 bits (537), Expect = 2e-55, Method: Composition-based stats. Identities = 57/184 (30%), Positives = 90/184 (48%), Gaps = 10/184 (5%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 + P R +FK++VIG+ VGKT + R+ F ATIGVDF + ++ D Sbjct: 9 GSLVPRGS-RSRIFKIIVIGDSNVGKTCLTYRFCAGRFPDRTEATIGVDFRERAVDIDGE 67 Query: 73 TLVRLQLWDIAGQERFG-NMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 +++QLWD AGQERF +M + YY+ V+D++ ++F ++ W + + Sbjct: 68 R-IKIQLWDTAGQERFRKSMVQHYYRNVHAVVFVYDMTNMASFHSLPAWIEECKQHL--- 123 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK---DNINIEEAARFL 188 + IP +L+ NKCD +F H + ETSAK DN ++E L Sbjct: 124 LANDIPRILVGNKCDLRSAIQVPTDLAQKFADTHSMPLF-ETSAKNPNDNDHVEAIFMTL 182 Query: 189 VEKI 192 K+ Sbjct: 183 AHKL 186 >2HEI-A nrPDB Length = 179 Score = 210 bits (534), Expect = 6e-55, Method: Composition-based stats. Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 6/171 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++GE VGK+S++ R+V F ++ +TIG F + + D T V+ ++WD AGQ Sbjct: 9 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDD-TTVKFEIWDTAGQ 67 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ER+ ++ +YY+ A A VV+DI+ TF W +L + I L NK Sbjct: 68 ERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKA 123 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNH 196 D + + ++ + ETSAK +N+ + + +K+ + Sbjct: 124 DLANKRMVEYEEAQAYADDNSLL-FMETSAKTAMNVNDLFLAIAKKLPKSE 173 >3BC1-A nrPDB Length = 195 Score = 209 bits (533), Expect = 6e-55, Method: Composition-based stats. Identities = 55/191 (28%), Positives = 95/191 (49%), Gaps = 14/191 (7%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL------- 74 ++L K L +G+ GVGKTS++ +Y F+ + T+G+DF K + + + Sbjct: 8 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAVGRG 67 Query: 75 --VRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 + LQLWD AG ERF ++T ++++A+G ++FD++ +F V W S L + N Sbjct: 68 QRIHLQLWDTAGLERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYSEN 127 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 VL NK D + + + +++G +FETSA + NI A L++ I Sbjct: 128 PD---IVLCGNKSDLEDQRAVKEEEARELAEKYGIP-YFETSAANGTNISHAIEMLLDLI 183 Query: 193 LVN-HQSFPNE 202 + +S Sbjct: 184 MKRMERSVDKS 194 >4KYI-B nrPDB Length = 170 Score = 209 bits (532), Expect = 9e-55, Method: Composition-based stats. Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 6/167 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++GE VGK+S++ R+V F ++ +TIG F + + D T V+ ++WD AG Sbjct: 10 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDD-TTVKFEIWDTAGL 68 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ER+ ++ +YY+ A A VV+DI+ + TF W +L + I L NK Sbjct: 69 ERYHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP----NIVIALAGNKA 124 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + + + ++ + ETSAK +N+ E + +K+ Sbjct: 125 DLASKRAVEFQEAQAYADDNSLL-FMETSAKTAMNVNEIFMAIAKKL 170 >2FFQ-A nrPDB Length = 171 Score = 208 bits (530), Expect = 2e-54, Method: Composition-based stats. Identities = 62/168 (36%), Positives = 96/168 (57%), Gaps = 6/168 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++ +GE VGKTS+I R+++ F Y+ATIG+DF K + + RT VRLQLWD AGQ Sbjct: 3 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQ 61 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ ++F+ KW D+ GS + +L+ NK Sbjct: 62 ERFRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDV----RTERGSDVIIMLVGNKT 117 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D + + +Q KE + ETSAK N+++ R + +L Sbjct: 118 DLADKRQITIEEGEQRAKELSVM-FIETSAKTGYNVKQLFRRVASALL 164 >5YOZ-A nrPDB Length = 177 Score = 208 bits (529), Expect = 2e-54, Method: Composition-based stats. Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 6/182 (3%) Query: 12 GAAAAPAPETREHL-FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD 70 G+ P+ E K++++GE G GK+SI R+ F + TIG F K + D Sbjct: 1 GSMNTHPPQLMEATSAKIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMID 60 Query: 71 SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHL 130 R L + ++WD AG ERF ++ +YY+ A GA VV+DI+ S + + W +L + Sbjct: 61 GRAL-KYEIWDTAGLERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRANADP 119 Query: 131 PNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 + VL+ NK D S + E A ++E SAKDN N+E+ L Sbjct: 120 ----SLIIVLVGNKKDLGSLRQVSFEDGQRLAAEEQLAAFYEASAKDNNNVEQVFLDLAA 175 Query: 191 KI 192 K+ Sbjct: 176 KL 177 >2GIL-A nrPDB Length = 162 Score = 205 bits (521), Expect = 1e-53, Method: Composition-based stats. Identities = 61/167 (36%), Positives = 95/167 (56%), Gaps = 6/167 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++ +GE VGKTS+I R+++ F Y+ATIG+DF K + + RT VRLQLWD AGQ Sbjct: 2 FKLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRT-VRLQLWDTAGQ 60 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ ++F+ KW D+ GS + +L+ NK Sbjct: 61 ERFRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDV----RTERGSDVIIMLVGNKT 116 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D S + ++ KE + ETSAK N+++ R + + Sbjct: 117 DLADKRQVSIEEGERKAKELNVM-FIETSAKAGYNVKQLFRRVAAAL 162 >2FG5-A nrPDB Length = 192 Score = 205 bits (521), Expect = 1e-53, Method: Composition-based stats. Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 6/169 (3%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 KV ++G+ GVGK+SI+ R+V F + TIG F K + L + +WD A Sbjct: 22 RELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPC-GNELHKFLIWDTA 80 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 GQERF ++ +YY+ + A +V+DI++ +F + KW +L I + N Sbjct: 81 GQERFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKELKEH----GPENIVMAIAGN 136 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 KCD + ++ + G ETSAK+ INIEE + + +I Sbjct: 137 KCDLSDIREVPLKDAKEYAESIGAIV-VETSAKNAINIEELFQGISRQI 184 >4M8N-E nrPDB Length = 199 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 49/175 (28%), Positives = 88/175 (50%), Gaps = 7/175 (4%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 P RE+ K++V+G GVGK+++ ++V +F + Y TI + K + D++ + L Sbjct: 1 GPHMREY--KLVVLGSGGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCM-L 56 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 ++ D AG E+F M +Y K G +V+ I+ STF + + + + + + +P Sbjct: 57 EILDTAGTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQI---LRVKDTDDVP 113 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NKCD + Q ++ + E+SAK IN+ E LV +I Sbjct: 114 MILVGNKCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 168 >5CM8-B nrPDB Length = 203 Score = 204 bits (520), Expect = 2e-53, Method: Composition-based stats. Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 6/186 (3%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 + + P L KV+++G GVGK+++ ++++ F + Y T + KV+ D Sbjct: 1 GSMSKKPTAGPALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGE 59 Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 V++ + D AGQE + + Y++ G VF I+ +F+A +++ + + + N Sbjct: 60 E-VQIDILDTAGQEDYAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQI---LRVKN 115 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 IP +L+ NKCD N S+ Q + + ETSAK N+++ L+ +I Sbjct: 116 DESIPFLLVGNKCDLNDKRKVPLSE-CQLRAQQWAVPYVETSAKTRENVDKVFFDLMREI 174 Query: 193 LVNHQS 198 Sbjct: 175 RSRKTE 180 >1D5C-A nrPDB Length = 162 Score = 204 bits (519), Expect = 3e-53, Method: Composition-based stats. Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 6/167 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 +K++ +GE VGKTSII R+++ F +Y++TIG+DF K L D VRLQLWD AGQ Sbjct: 2 YKLVFLGEQAVGKTSIITRFMYDTFDNNYQSTIGIDFLSKTLYLD-EGPVRLQLWDTAGQ 60 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ Y +++ A VV+DI+ +FE KW D+ + G + L+ NK Sbjct: 61 ERFRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDILN----ERGKDVIIALVGNKT 116 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + + Q +E+ + ETSAK NI+ + K+ Sbjct: 117 DLGDLRKVTYEEGMQKAQEYNTM-FHETSAKAGHNIKVLFKKTASKL 162 >1YZU-A nrPDB Length = 170 Score = 203 bits (518), Expect = 3e-53, Method: Composition-based stats. Identities = 58/174 (33%), Positives = 95/174 (54%), Gaps = 6/174 (3%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 +R + FKV+++GE VGKTS++ RY F+ + T+ F K LN + V L + Sbjct: 1 GSRAYSFKVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGGKR-VNLAI 59 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD AGQERF + +YY+++ GA +V+DI+ +F+ V W +L + G+ I Sbjct: 60 WDTAGQERFHALGPIYYRDSNGAILVYDITDEDSFQKVKNWVKELRKML----GNEICLC 115 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 ++ NK D K+ S + + + + G A + TSAK N IEE L ++++ Sbjct: 116 IVGNKIDLEKERHVSIQEAESYAESVG-AKHYHTSAKQNKGIEELFLDLCKRMI 168 >1EK0-A nrPDB Length = 170 Score = 203 bits (517), Expect = 4e-53, Method: Composition-based stats. Identities = 53/170 (31%), Positives = 91/170 (53%), Gaps = 9/170 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K++++GE VGK+SI+ R+V F+++ TIG F + + + T V+ ++WD AGQ Sbjct: 4 IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHT-VKFEIWDTAGQ 62 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++ +YY+ A A VV+D+++ +F W +L H I L+ NK Sbjct: 63 ERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKEL----HEQASKDIIIALVGNKI 118 Query: 146 DQNK---DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + + + + ++ +E G +FETSAK N+ + + EKI Sbjct: 119 DMLQEGGERKVAREEGEKLAEEKGLL-FFETSAKTGENVNDVFLGIGEKI 167 >2J0V-A nrPDB Length = 212 Score = 202 bits (515), Expect = 8e-53, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 84/200 (42%), Gaps = 18/200 (9%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 + + K + +G+ VGKT ++ Y F Y T+ +F+ + D + +V Sbjct: 1 GSHMSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VAVDGQ-IVN 58 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSP 135 L LWD AGQE + + + Y+ A + F + +++E V KW +L Sbjct: 59 LGLWDTAGQEDYSRLRPLSYRGADIFVLAFSLISKASYENVLKKWMPELRRFA-----PN 113 Query: 136 IPAVLLANKCDQNKDS--------SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARF 187 +P VL+ K D D + +Q ++ K+ G A + E S+K N++ Sbjct: 114 VPIVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSSKTQQNVKAVFDT 173 Query: 188 LVEKILVNHQ--SFPNEEND 205 ++ +L + P + Sbjct: 174 AIKVVLQPPRRKEVPRRRKN 193 >4DXA-A nrPDB Length = 169 Score = 200 bits (508), Expect = 5e-52, Method: Composition-based stats. Identities = 46/169 (27%), Positives = 86/169 (50%), Gaps = 5/169 (2%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 +K++V+G +GVGK+++ ++V +F + Y TI + K + D++ + L++ D A Sbjct: 4 REYKLVVLGSVGVGKSALTVQFVQGIFVEKYDPTIEDSYR-KQVEVDAQQCM-LEILDTA 61 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 G E+F M +Y K G +V+ I+ STF + + + + + + +P +L+ N Sbjct: 62 GTEQFTAMRDLYMKNGQGFALVYSITAQSTFNDLQDLREQI---LRVKDTDDVPMILVGN 118 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 KCD + Q ++ + E+SAK IN+ E LV +I Sbjct: 119 KCDLEDERVVGKEQGQNLARQWNNCAFLESSAKSKINVNEIFYDLVRQI 167 >1YVD-A nrPDB Length = 169 Score = 198 bits (504), Expect = 2e-51, Method: Composition-based stats. Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 6/169 (3%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 KV ++G+ GVGK+SI+ R+V F + TIG F K + + + L + +WD A Sbjct: 4 RELKVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNE-LHKFLIWDTA 62 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 GQERF + +YY+ + A +V+DI++ TF + W +L I + N Sbjct: 63 GQERFRALAPMYYRGSAAAIIVYDITKEETFSTLKNWVRELRQH----GPPSIVVAIAGN 118 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 KCD + A + ETSAK+ INI E + +I Sbjct: 119 KCDLTDVREVMERDAKDYADSI-HAIFVETSAKNAININELFIEISRRI 166 >5C2K-A nrPDB Length = 415 Score = 198 bits (503), Expect = 2e-51, Method: Composition-based stats. Identities = 43/201 (21%), Positives = 72/201 (35%), Gaps = 27/201 (13%) Query: 7 GDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 66 G G AA K++++G+ GKT ++ + F + Y T+ ++ Sbjct: 1 GSSGSSGMAAIRK-------KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD- 52 Query: 67 LNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLD 125 + D + V L LWD AGQE + + + Y + + F I + E + KW ++ Sbjct: 53 IEVDGKQ-VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK 111 Query: 126 SKVHLPNGSPIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFET 173 +P +L+ NK D D P + G G+ E Sbjct: 112 HFC-----PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMEC 166 Query: 174 SAKDNINIEEAARFLVEKILV 194 SAK + E L Sbjct: 167 SAKTKDGVREVFEMATRAALQ 187 >3BWD-D nrPDB Length = 182 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 18/183 (9%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 K + +G+ VGKT ++ Y F Y T+ +F+ V+ + V L LWD Sbjct: 6 SRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVVV--NGATVNLGLWDT 63 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLL 141 AGQE + + + Y+ A + F + +++E V KW +L +P VL+ Sbjct: 64 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVSKKWIPELKHYA-----PGVPIVLV 118 Query: 142 ANKCDQNKDSS----------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 K D D + Q ++ K G + E S+K N++ + Sbjct: 119 GTKLDLRDDKQFFIDHPGAVPITTVQGEELKKLIGAPAYIECSSKSQENVKGVFDAAIRV 178 Query: 192 ILV 194 +L Sbjct: 179 VLQ 181 >3WYF-A nrPDB Length = 219 Score = 197 bits (501), Expect = 3e-51, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 9/184 (4%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 +APA FK++++G+ G GKT+ +KR++ F + Y ATIGV+ + + + Sbjct: 1 MSAPAANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEV-HPLSFYTNFG 59 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 ++ +WD AG E+FG + YY A A ++FD++ T++ V W DL Sbjct: 60 EIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC----- 114 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 IP VL NK D + ++ F ++ +++ SAK N N E+ +L K+ Sbjct: 115 ENIPIVLCGNKVDVKERKV--KAKTITFHRKKNL-QYYDISAKSNYNFEKPFLWLARKLA 171 Query: 194 VNHQ 197 N Q Sbjct: 172 GNPQ 175 >2N1B-A nrPDB Length = 261 Score = 197 bits (500), Expect = 4e-51, Method: Composition-based stats. Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 21/208 (10%) Query: 1 MAGGGAGDPGLGAAAAPAPETREHL------------FKVLVIGELGVGKTSIIKRYVHQ 48 M GG L P +R FK++++G+ G GKT+ +KR++ Sbjct: 15 MTGGQQMGRDLYDDDDKDPSSRSAAGTMAAQGEPQVQFKLVLVGDGGTGKTTFVKRHLTG 74 Query: 49 LFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDI 108 F + Y AT+GV+ ++ +R ++ +WD AGQE+FG + YY +A A ++FD+ Sbjct: 75 EFEKKYVATLGVEV-HPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDV 133 Query: 109 SRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFA 168 + T++ V W DL IP VL NK D ++ S V F ++ Sbjct: 134 TSRVTYKNVPNWHRDLVRVC-----ENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNL- 185 Query: 169 GWFETSAKDNINIEEAARFLVEKILVNH 196 +++ SAK N N E+ +L K++ + Sbjct: 186 QYYDISAKSNYNFEKPFLWLARKLIGDP 213 >2P5S-A nrPDB Length = 199 Score = 196 bits (499), Expect = 6e-51, Method: Composition-based stats. Identities = 56/189 (29%), Positives = 95/189 (50%), Gaps = 12/189 (6%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 GL + + + +K+++ G+ VGK+S + R F ++ AT+GVDF +K L Sbjct: 13 GLVPRGSAKSFSSQKAYKIVLAGDAAVGKSSFLMRLCKNEFRENISATLGVDFQMKTLIV 72 Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 D V LQLWD AGQERF ++ + Y+++A G +++D++ +F + +W ++ H Sbjct: 73 DGERTV-LQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCEKSFLNIREWVDMIEDAAH 131 Query: 130 LPNGSPIPAVLLANKCDQNK------DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 +P +L+ NK D ++ +G A + ETSAKD NI E Sbjct: 132 ----ETVPIMLVGNKADIRDTAATEGQKCVPGHFGEKLAMTYG-ALFCETSAKDGSNIVE 186 Query: 184 AARFLVEKI 192 A L ++ Sbjct: 187 AVLHLAREV 195 >5XOJ-A nrPDB Length = 182 Score = 196 bits (498), Expect = 7e-51, Method: Composition-based stats. Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 9/184 (4%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 +APA FK++++G+ G GKT+ +KR++ F + Y ATIGV+ + + + Sbjct: 1 MSAPAANGEVPTFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEV-HPLSFYTNFG 59 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 ++ +WD AG E+FG + YY A A ++FD++ T++ V W DL Sbjct: 60 EIKFDVWDTAGLEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC----- 114 Query: 134 SPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 IP VL NK D + ++ F ++ +++ SAK N N E+ +L K+ Sbjct: 115 ENIPIVLCGNKVDVKERKV--KAKTITFHRKKNL-QYYDISAKSNYNFEKPFLWLARKLA 171 Query: 194 VNHQ 197 N Q Sbjct: 172 GNPQ 175 >2NTY-C nrPDB Length = 180 Score = 195 bits (497), Expect = 9e-51, Method: Composition-based stats. Identities = 44/183 (24%), Positives = 77/183 (42%), Gaps = 18/183 (9%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 K + +G+ VGKT ++ Y F Y T+ +F+ V+ D T V L LWD Sbjct: 4 SRFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVV-VDGNT-VNLGLWDT 61 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLL 141 AGQE + + + Y+ A + F + +++E V KW +L +P +L+ Sbjct: 62 AGQEDYNRLRPLSYRGADVFILAFSLISKASYENVAKKWIPELRHYA-----PGVPIILV 116 Query: 142 ANKCDQNKDSS----------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 K D D + +Q ++ K G + E S+K N++ ++ Sbjct: 117 GTKLDLRDDKQFFIDHPGAVPITTNQGEELKKLIGSPIYIECSSKTQQNVKAVFDAAIKV 176 Query: 192 ILV 194 +L Sbjct: 177 VLQ 179 >4U5X-A nrPDB Length = 178 Score = 195 bits (495), Expect = 2e-50, Method: Composition-based stats. Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 18/185 (9%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 K + +G+ VGKT ++ Y F Y T+ +F+ ++ D ++V L LW Sbjct: 1 GSTRFIKCVTVGDGAVGKTCMLICYTSNKFPTDYIPTVFDNFSAN-VSVDG-SVVNLGLW 58 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAV 139 D AG E + + + Y+ A + F + +++E V KW +L +P V Sbjct: 59 DTAGLEDYSRLRPLSYRGADVFILSFSLISRASYENVQKKWMPELRRFA-----PGVPVV 113 Query: 140 LLANKCDQNKDS----------SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLV 189 L+ K D +D + Q ++ K G + E S+K NI+ + Sbjct: 114 LVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYIECSSKTQRNIKAVFDTAI 173 Query: 190 EKILV 194 + +L Sbjct: 174 KVVLQ 178 >2WBL-C nrPDB Length = 180 Score = 195 bits (495), Expect = 2e-50, Method: Composition-based stats. Identities = 45/181 (24%), Positives = 75/181 (41%), Gaps = 18/181 (9%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 K + +G+ VGKT ++ Y F Y T+ +F+ V+ D T V L LWD A Sbjct: 5 RFIKCVTVGDGAVGKTCMLISYTGNTFPTDYVPTVFDNFSANVV-VDGST-VNLGLWDTA 62 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLA 142 GQE + + + Y+ A + F + +++E + KW +L IP VL+ Sbjct: 63 GQEDYNRLRPLSYRGADVFLLAFSLISKASYENIHKKWLPELKHYA-----PGIPIVLVG 117 Query: 143 NKCDQNKDSS----------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 K D D + +Q ++ K G + E S+K N++ + Sbjct: 118 TKLDLRDDKQFLKDHPGAASITTAQGEELRKMIGAVRYLECSSKTQQNVKAVFDTAIRVA 177 Query: 193 L 193 L Sbjct: 178 L 178 >5ZHX-e nrPDB Length = 198 Score = 194 bits (494), Expect = 2e-50, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 69/192 (35%), Gaps = 20/192 (10%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 P K++++G+ GKT ++ + F + Y T+ ++ + D + V Sbjct: 1 GPLGSMAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQ-V 58 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGS 134 L LWD AGQE + + + Y + + F I + E + KW ++ Sbjct: 59 ELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC-----P 113 Query: 135 PIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 +P +L+ NK D D P + G G+ E SAK + Sbjct: 114 NVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKTKDGVR 173 Query: 183 EAARFLVEKILV 194 E L Sbjct: 174 EVFEMATRAALQ 185 >1Z22-A nrPDB Length = 168 Score = 194 bits (493), Expect = 3e-50, Method: Composition-based stats. Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 7/175 (4%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 E K++V+G VGK+S+I+RY +F++ Y+ TIGVDF + + + VRL LW Sbjct: 1 GSEVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDED-VRLMLW 59 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQE F +T+ YY+ A +VF + +FEA+ W+ + ++V IP L Sbjct: 60 DTAGQEEFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEV-----GDIPTAL 114 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 + NK D DS + + K ++ TS K+++N+ E ++L EK L Sbjct: 115 VQNKIDLLDDSCIKNEEAEGLAKRLKL-RFYRTSVKEDLNVSEVFKYLAEKHLQK 168 >5JCP-B nrPDB Length = 419 Score = 192 bits (489), Expect = 7e-50, Method: Composition-based stats. Identities = 42/197 (21%), Positives = 72/197 (36%), Gaps = 22/197 (11%) Query: 13 AAAAPAPETREHLF--KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD 70 A+ +P E K++++G+ GKT ++ F + Y T+ ++ + D Sbjct: 229 ASNSPGIEGLSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYVAD-IEVD 287 Query: 71 SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVH 129 + V L LWD AGQE + + + Y + + F I + E + KW ++ Sbjct: 288 GKQ-VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFC- 345 Query: 130 LPNGSPIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKD 177 +P +L+ NK D D P + G G+ E SAK Sbjct: 346 ----PNVPIILVGNKKDLRNDEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSAKT 401 Query: 178 NINIEEAARFLVEKILV 194 + E L Sbjct: 402 KDGVREVFEMATRAALQ 418 >1ZC4-A nrPDB Length = 175 Score = 192 bits (488), Expect = 1e-49, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 6/179 (3%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 + L KV+++G GVGK+++ ++++ F + Y T + KV+ D V++ + Sbjct: 1 QNSLALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEE-VQIDI 58 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 D AG E + + Y++ G VF I+ +F A ++ + + + +P + Sbjct: 59 LDTAGLEDYAAIRDNYFRSGEGFLCVFSITEMESFAATADFREQI---LRVKEDENVPFL 115 Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 L+ NK D S + ++ + ETSAK N+++ L+ +I Sbjct: 116 LVGNKSDLEDKRQVSVEEAKNRAEQWNV-NYVETSAKTRANVDKVFFDLMREIRARKME 173 >5UWI-A nrPDB Length = 237 Score = 192 bits (487), Expect = 1e-49, Method: Composition-based stats. Identities = 56/185 (30%), Positives = 97/185 (52%), Gaps = 10/185 (5%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G+ A E + FK++++G+ G GKT+ +KR++ F + Y AT+GV+ ++ + Sbjct: 19 GSHMAAQGEPQVQ-FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV-HPLVFHTN 76 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 R ++ +WD AGQE+FG + YY +A A ++FD++ T++ V W DL Sbjct: 77 RGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC--- 133 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK 191 IP VL NK D ++ S V F ++ +++ SAK N N E+ +L K Sbjct: 134 --ENIPIVLCGNKVDIKDRKVKAKSIV--FHRKKNL-QYYDISAKSNYNFEKPFLWLARK 188 Query: 192 ILVNH 196 ++ + Sbjct: 189 LIGDP 193 >2KE5-A nrPDB Length = 174 Score = 191 bits (485), Expect = 2e-49, Method: Composition-based stats. Identities = 42/175 (24%), Positives = 82/175 (46%), Gaps = 5/175 (2%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 L KV+++G GVGK+++ ++++ F + Y T + KV+ D V++ + D A Sbjct: 2 ALHKVIMVGSGGVGKSALTLQFMYDEFVEDYEPTKADSYRKKVV-LDGEE-VQIDILDTA 59 Query: 84 GQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 G E + + Y++ G +VF I+ +F A +++ + + IP +++ N Sbjct: 60 GLEDYAAIRDNYFRSGEGFLLVFSITEHESFTATAEFREQILRVKAEED--KIPLLVVGN 117 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 K D + + +E G + ETSAK N+++ L+ +I S Sbjct: 118 KSDLEERRQVPVEEARSKAEEWGV-QYVETSAKTRANVDKVFFDLMREIRTKKMS 171 >4KU4-A nrPDB Length = 206 Score = 190 bits (484), Expect = 3e-49, Method: Composition-based stats. Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 18/208 (8%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 G+ A +P + K+ ++GE GVGKTS+ +FS+ Y T+ + + + D Sbjct: 1 GSHMALSPGAGKITDKIAMLGEGGVGKTSLTVNLTKHVFSETYDPTLEDSYRRQCV-IDG 59 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSD-------L 124 L++ D AGQE +G + + ++ +VFD++R S+FEA + + L Sbjct: 60 IPS-HLEILDTAGQEEYGALREQWIRQNELFVIVFDVTRRSSFEAAERLFEEVIQTKRKL 118 Query: 125 DSKVHLPNGS--------PIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176 D P P VL+ NKCD + + K+ G G+ ETSAK Sbjct: 119 DETRRHPGDRHPDDLPFAPSLVVLVGNKCDLDTRREVGTLEGSSLAKKLG-CGFVETSAK 177 Query: 177 DNINIEEAARFLVEKILVNHQSFPNEEN 204 N+EEA +V + +EE Sbjct: 178 LGTNVEEAFFSVVRADRRRKREVTDEEQ 205 >3TH5-A nrPDB Length = 204 Score = 190 bits (483), Expect = 4e-49, Method: Composition-based stats. Identities = 44/181 (24%), Positives = 74/181 (40%), Gaps = 20/181 (11%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L LWD AGQ Sbjct: 31 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGK-PVNLGLWDTAGQ 88 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + + F + ++FE V KW ++ + H P P +L+ K Sbjct: 89 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEV--RHHCP---NTPIILVGTK 143 Query: 145 CDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D D + Q KE G + E SA ++ + + Sbjct: 144 LDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 203 Query: 193 L 193 L Sbjct: 204 L 204 >5CLL-A nrPDB Length = 191 Score = 190 bits (482), Expect = 5e-49, Method: Composition-based stats. Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 9/171 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 FK++++G+ G GKT+ +KR++ F + Y AT+GV+ ++ +R ++ +WD AGQ Sbjct: 11 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV-HPLVFHTNRGPIKFNVWDTAGQ 69 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 E+FG + YY +A A ++FD++ T++ V W DL IP VL NK Sbjct: 70 EKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVC-----ENIPIVLCGNKV 124 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNH 196 D ++ S V F ++ +++ SAK N N E+ +L K++ + Sbjct: 125 DIKDRKVKAKSIV--FHRKKNL-QYYDISAKSNYNFEKPFLWLARKLIGDP 172 >3RYT-C nrPDB Length = 180 Score = 187 bits (476), Expect = 3e-48, Method: Composition-based stats. Identities = 43/181 (23%), Positives = 73/181 (40%), Gaps = 20/181 (11%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L LWD AG Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGK-PVNLGLWDTAGL 64 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + + F + ++FE V KW ++ + H P P +L+ K Sbjct: 65 EDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEV--RHHCP---NTPIILVGTK 119 Query: 145 CDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D D + Q KE G + E SA ++ + + Sbjct: 120 LDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFDEAIRAV 179 Query: 193 L 193 L Sbjct: 180 L 180 >2WKQ-A nrPDB Length = 332 Score = 186 bits (473), Expect = 6e-48, Method: Composition-based stats. Identities = 44/187 (23%), Positives = 75/187 (40%), Gaps = 20/187 (10%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 E + L K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L L Sbjct: 150 EAAKELIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGK-PVNLGL 207 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPA 138 WD AG E + + + Y + + F + ++F V KW ++ + H P P Sbjct: 208 WDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFHHVRAKWYPEV--RHHCP---NTPI 262 Query: 139 VLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAAR 186 +L+ K D D + Q KE G + E SA ++ Sbjct: 263 ILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALTQRGLKTVFD 322 Query: 187 FLVEKIL 193 + +L Sbjct: 323 EAIRAVL 329 >2FV8-A nrPDB Length = 207 Score = 186 bits (473), Expect = 6e-48, Method: Composition-based stats. Identities = 37/183 (20%), Positives = 65/183 (35%), Gaps = 20/183 (10%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++V+G+ GKT ++ + F + Y T+ ++ + D + V L LWD AGQE Sbjct: 27 KLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVAD-IEVDGKQ-VELALWDTAGQE 84 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y + + F + + E + KW ++ +P +L+ANK Sbjct: 85 DYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFC-----PNVPIILVANKK 139 Query: 146 DQNKDSSQSPS------------QVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D D + E SAK + E L Sbjct: 140 DLRSDEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAAL 199 Query: 194 VNH 196 Sbjct: 200 QKR 202 >2ATX-A nrPDB Length = 194 Score = 185 bits (471), Expect = 9e-48, Method: Composition-based stats. Identities = 44/202 (21%), Positives = 80/202 (39%), Gaps = 23/202 (11%) Query: 7 GDPGLG-AAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALK 65 G PG G ++ A P + K +V+G+ VGKT ++ Y + F + Y T+ +A+ Sbjct: 1 GSPGAGRSSMAHGPGA--LMLKCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVS 58 Query: 66 VLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDL 124 + + + L L+D AGQE + + + Y + F + ++F+ V +W +L Sbjct: 59 -VTVGGKQYL-LGLYDTAGQEDYDRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPEL 116 Query: 125 DSKVHLPNGSPIPAVLLANKCDQNKD------------SSQSPSQVDQFCKEHGFAGWFE 172 +P +L+ + D D Q + KE G + E Sbjct: 117 KEYA-----PNVPFLLIGTQIDLRDDPKTLARLNDMKEKPICVEQGQKLAKEIGACCYVE 171 Query: 173 TSAKDNINIEEAARFLVEKILV 194 SA ++ + IL Sbjct: 172 CSALTQKGLKTVFDEAIIAILT 193 >2W2X-A nrPDB Length = 185 Score = 185 bits (471), Expect = 1e-47, Method: Composition-based stats. Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 20/190 (10%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 K +V+G++ VGKT ++ Y F Y T+ +++ V+ DS+ V Sbjct: 1 GGGSGGSQAIKCVVVGDVAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDSK-PVN 58 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSP 135 L LWD AGQE + + + Y + + F + +++E V KW ++ + H P+ Sbjct: 59 LGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEV--RHHCPS--- 113 Query: 136 IPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 P +L+ K D D + Q KE + E SA ++ Sbjct: 114 TPIILVGTKLDLRDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSALTQRGLKT 173 Query: 184 AARFLVEKIL 193 + +L Sbjct: 174 VFDEAIRAVL 183 >2J1L-A nrPDB Length = 214 Score = 185 bits (470), Expect = 1e-47, Method: Composition-based stats. Identities = 40/203 (19%), Positives = 85/203 (41%), Gaps = 20/203 (9%) Query: 5 GAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL 64 G + + A KV+++G+ G GKTS++ + F + Y T+ + + Sbjct: 14 GTENLYFQSMAGEEAPPGVRSVKVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMV 73 Query: 65 KVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSD 123 L + V L +WD AGQ+ + + ++Y +A + FD++ ++F+ + +W + Sbjct: 74 N-LQVKGK-PVHLHIWDTAGQDDYDRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPE 131 Query: 124 LDSKVHLPNGSPIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWF 171 ++ +P +++ K D KD S + + + + G + Sbjct: 132 VNHFC-----KKVPIIVVGCKTDLRKDKSLVNKLRRNGLEPVTYHRGQEMARSVGAVAYL 186 Query: 172 ETSAKDNINIEEAARFLVEKILV 194 E SA+ + N+ + E L Sbjct: 187 ECSARLHDNVHAVFQEAAEVALS 209 >5ZVP-A nrPDB Length = 181 Score = 184 bits (467), Expect = 3e-47, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 20/180 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ F + Y T+ ++ + D + V L LWD AGQE Sbjct: 7 KLVIVGDGACGKTCLLIVNSKGTFPEVYVPTVFENYVAD-VEVDGKH-VELALWDTAGQE 64 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y ++ + F I + + V KW S++ +P +L+ K Sbjct: 65 DYDRLRPLSYPDSHVILICFAIDSPDSLDNVQEKWISEVLHFC-----QGLPIILVGCKK 119 Query: 146 DQNKD------------SSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D D +P Q ++ K+ G + E SA+ N + E L Sbjct: 120 DLRHDPKTIEELHKTSQKPVTPEQGEEVRKKIGAYKYLECSARTNEGVREVFEAATRAAL 179 >3A58-B nrPDB Length = 188 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 20/184 (10%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++++G+ GKT ++ F + Y T+ ++ + D R V L LWD AGQE Sbjct: 12 KLVIVGDGACGKTCLLIVNSKGQFPEVYVPTVFENYVAD-VEVDGRR-VELALWDTAGQE 69 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 + + + Y ++ + F I + E V KW +++ +P +L+ K Sbjct: 70 DYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC-----QGVPIILVGCKV 124 Query: 146 DQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 D D + + + G G++E SAK + E L Sbjct: 125 DLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL 184 Query: 194 VNHQ 197 + Sbjct: 185 MGKS 188 >4KLZ-A nrPDB Length = 173 Score = 183 bits (465), Expect = 5e-47, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 76/178 (42%), Gaps = 6/178 (3%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 +K++++G GVGK+++ +++ F + + TI + +++ D L + Sbjct: 1 GSSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIRIRIDDEPAN--LDIL 58 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQ F M Y + G + + I+ +F V ++K + + P VL Sbjct: 59 DTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIY---RVRRTDDTPVVL 115 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 + NK D + + + +E +FETSA I++ LV +I + Sbjct: 116 VGNKSDLKQLRQVTKEEGLALAREFS-CPFFETSAAYRYYIDDVFHALVREIRRKEKE 172 >5WDR-A nrPDB Length = 171 Score = 182 bits (462), Expect = 1e-46, Method: Composition-based stats. Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 6/157 (3%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + Q F Y TI + K ++ D + L + D AGQE + M Y + Sbjct: 20 KSALTIQLIQQHFVTEYDPTIEDSYR-KHVSIDDEACL-LDILDTAGQEDYSAMRDQYMR 77 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G V+ I + + + ++ + + + + +P +L+ NKCD + S Sbjct: 78 TGEGFLCVYSIDSQQSLDEIHSFREQI---LRVKDQDEVPMILVGNKCDLEEHREVSTEA 134 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 K + + ETSAK IN+EEA LV +I Sbjct: 135 GQAVAKSYSIP-FMETSAKKRINVEEAFYQLVREIRK 170 >4FMC-F nrPDB Length = 117 Score = 181 bits (460), Expect = 2e-46, Method: Composition-based stats. Identities = 44/120 (36%), Positives = 74/120 (61%), Gaps = 5/120 (4%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 +L+IG+ GVGK+ ++ R+ +++ Y +TIGVDF ++ + D +T ++LQ+WD AGQER Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT-IKLQIWDTAGQER 59 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 F +T YY+ A G VV+D++ +F V +W ++D + +L+ NKCD Sbjct: 60 FRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYA----SENVNKLLVGNKCDL 115 >5VCU-A nrPDB Length = 208 Score = 181 bits (459), Expect = 2e-46, Method: Composition-based stats. Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 20/184 (10%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT+++ Y F + Y T+ ++ + D +V + L+D AGQ Sbjct: 12 IKCVVVGDGAVGKTALLIAYSSGCFPEDYVPTVFDNYNKNIPYGDG--IVSIALYDTAGQ 69 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAVLLANK 144 E + + + Y + V F + ++ E KW +L P VL+ K Sbjct: 70 EDYDRLRPLSYPDTDVFLVCFSLENPNSLENCHSKWAEELKHY-----NPDTPIVLVGTK 124 Query: 145 CDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D KD + Q + + G+ E SAK N+ EA ++ Sbjct: 125 LDLKKDEEYVKKLKEKKISPVTTEQGQEMKDKIKACGYIECSAKTMENLTEAFNMAIDIA 184 Query: 193 LVNH 196 + Sbjct: 185 MKQR 188 >3E5H-A nrPDB Length = 178 Score = 180 bits (456), Expect = 5e-46, Method: Composition-based stats. Identities = 51/169 (30%), Positives = 84/169 (49%), Gaps = 2/169 (1%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K++V+G+ GKTS+ + + F + Y+ TIG+DF L+ + V LQ+WDI GQ Sbjct: 7 LKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 G M Y A G +V+DI+ +FE + W + + P+ L+ NK Sbjct: 67 TIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPL-VALVGNKI 125 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 D + P + +FC+E+GF+ F SAK ++ + + +IL Sbjct: 126 DLEHMRTIKPEKHLRFCQENGFSSHF-VSAKTGDSVFLCFQKVAAEILG 173 >1RYH-A nrPDB Length = 203 Score = 180 bits (456), Expect = 6e-46, Method: Composition-based stats. Identities = 45/200 (22%), Positives = 75/200 (37%), Gaps = 39/200 (19%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 K +V+G+ VGKT ++ Y F Y T+ +++ V+ D + V L LWD AGQ Sbjct: 6 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVM-VDGK-PVNLGLWDTAGQ 63 Query: 86 ERFGNMTRVYYKE-------------------AVGAFVVFDISRSSTFEAVL-KWKSDLD 125 E + + + Y + A + F + ++FE V KW ++ Sbjct: 64 EDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPEV- 122 Query: 126 SKVHLPNGSPIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFET 173 + H P P +L+ K D D + Q KE G + E Sbjct: 123 -RHHCP---NTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLEC 178 Query: 174 SAKDNINIEEAARFLVEKIL 193 SA ++ + +L Sbjct: 179 SALTQRGLKTVFDEAIRAVL 198 >2ERY-A nrPDB Length = 172 Score = 178 bits (453), Expect = 1e-45, Method: Composition-based stats. Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 6/157 (3%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ +++ F Y TI + + + D RL + D AGQE FG M Y + Sbjct: 18 KSALTIQFIQSYFVTDYDPTIEDSYTKQCVIDD--RAARLDILDTAGQEEFGAMREQYMR 75 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G +VF ++ +FE + K++ + + + + P +L+ NK D + + + Sbjct: 76 TGEGFLLVFSVTDRGSFEEIYKFQRQI---LRVKDRDEFPMILIGNKADLDHQRQVTQEE 132 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 Q ++ + E SAK +N+++A LV I Sbjct: 133 GQQLARQLKV-TYMEASAKIRMNVDQAFHELVRVIRK 168 >3REG-A nrPDB Length = 194 Score = 177 bits (450), Expect = 2e-45, Method: Composition-based stats. Identities = 43/188 (22%), Positives = 83/188 (44%), Gaps = 10/188 (5%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS 71 A E + K++V+G+ VGKT ++ + Y T+ +F+ V+ + + Sbjct: 10 MNTGAGKIENGKKALKIVVVGDGAVGKTCLLLAFSKGEIPTAYVPTVFENFSH-VMKYKN 68 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHL 130 + L LWD AGQE + + + Y ++ + F ++ ++F+ + KW+ ++ + Sbjct: 69 EEFI-LHLWDTAGQEEYDRLRPLSYADSDVVLLCFAVNNRTSFDNISTKWEPEIKHYIDT 127 Query: 131 PNGSPIPAVLLANKCDQNKDSS--QSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFL 188 VL+ K D KD S + + D C++ G + E S+ I + E Sbjct: 128 AKT-----VLVGLKVDLRKDGSDDVTKQEGDDLCQKLGCVAYIEASSVAKIGLNEVFEKS 182 Query: 189 VEKILVNH 196 V+ I N Sbjct: 183 VDCIFSNK 190 >4WA7-A nrPDB Length = 170 Score = 177 bits (449), Expect = 3e-45, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 72/161 (44%), Gaps = 7/161 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AG E + M Y + Sbjct: 17 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGLEEYSAMRDQYMR 74 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ + +FE + ++ + + + +P VL+ NKCD + Q Sbjct: 75 TGEGFLCVFAINNTKSFEDIHHYREQIK---RVKDSEDVPMVLVGNKCDL-PSRTVDTKQ 130 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 + +G + ETSAK +++A LV +I + + Sbjct: 131 AQDLARSYGIP-FIETSAKTRQGVDDAFYTLVREIRKHKEK 170 >3VHL-B nrPDB Length = 195 Score = 177 bits (449), Expect = 4e-45, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 69/187 (36%), Gaps = 20/187 (10%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV 75 + + K +V+G+ VGK ++ Y F Y T+ ++A+ V+ Sbjct: 1 GSSGSSGMQTIKCVVVGDGAVGKNCLLISYTTNKFPSEYVPTVFDNYAVTVMI--GGEPY 58 Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGS 134 L L+D AGQE + + + Y + V F + S+FE V KW ++ Sbjct: 59 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-----P 113 Query: 135 PIPAVLLANKCDQNKD------------SSQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 P +L+ + D D +P ++ ++ + E SA ++ Sbjct: 114 KTPFLLVGTQIDLRDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSALTQKGLK 173 Query: 183 EAARFLV 189 + Sbjct: 174 NVFDEAI 180 >3PIR-A nrPDB Length = 183 Score = 176 bits (447), Expect = 6e-45, Method: Composition-based stats. Identities = 47/189 (24%), Positives = 89/189 (47%), Gaps = 7/189 (3%) Query: 8 DPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVL 67 P A + P +K++V+G+ GVGK+++ ++ ++F Y TI + K Sbjct: 1 GPLGSMATSAVPSENLPTYKLVVVGDGGVGKSALTIQFFQKIFVPEYDPTIEDSYL-KHT 59 Query: 68 NWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSK 127 D++ + L + D AGQE F M Y + G +V+ ++ ++FE V ++ + Sbjct: 60 EIDNQWAI-LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVDRFHQLI--- 115 Query: 128 VHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKD-NINIEEAAR 186 + + + P +L+ANK D + Q + ++ + ETSAKD +N+++ Sbjct: 116 LRVKDRESFPMILVANKVDLMHLRKVTRDQGKEMATKYNIP-YIETSAKDPPLNVDKTFH 174 Query: 187 FLVEKILVN 195 LV I Sbjct: 175 DLVRVIRQQ 183 >3CON-A nrPDB Length = 190 Score = 176 bits (447), Expect = 7e-45, Method: Composition-based stats. Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 7/161 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AGQE + M Y + Sbjct: 34 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 91 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ S +F + ++ + + + +P VL+ NKCD + Q Sbjct: 92 TGEGFLCVFAINNSKSFADINLYREQIK---RVKDSDDVPMVLVGNKCDLPT-RTVDTKQ 147 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQS 198 + K +G + ETSAK +E+A LV +I Sbjct: 148 AHELAKSYGIP-FIETSAKTRQGVEDAFYTLVREIRQYRMK 187 >4MIT-A nrPDB Length = 186 Score = 176 bits (446), Expect = 8e-45, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 82/191 (42%), Gaps = 20/191 (10%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 A + K++V+G+ VGKT ++ Y + F + Y T+ ++ + + ++L Sbjct: 3 AMSEKPTSIKLVVVGDGAVGKTCLLISYSIRKFPEDYIPTVFDNYVVSLTA--GTRQIQL 60 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPI 136 LWD AG E + + + Y A + F ++ S +++ V KW ++ + Sbjct: 61 ALWDTAGLEEYDQLRPLSYSSASIFLICFSVTSSVSYDNVITKWHPEVIHFA-----PKV 115 Query: 137 PAVLLANKCDQNKD------------SSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEA 184 P +L+ K D D + + ++ ++ + E SAK + N++ Sbjct: 116 PIILVGTKLDTRNDPAIVKRLTEQGMTVINTAKGEELKNRIKAVKYIECSAKTSENLKTV 175 Query: 185 ARFLVEKILVN 195 V+ +L+N Sbjct: 176 FDEAVKTVLMN 186 >2ERX-A nrPDB Length = 172 Score = 176 bits (446), Expect = 9e-45, Method: Composition-based stats. Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 5/165 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++V V G GVGK+S++ R+V F + Y T+ + +V++ D +++ LQ+ D G Sbjct: 4 YRVAVFGAGGVGKSSLVLRFVKGTFRESYIPTVEDTYR-QVISCD-KSICTLQITDTTGS 61 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 +F M R+ + +V+ I+ + E + + + IP +L+ NKC Sbjct: 62 HQFPAMQRLSISKGHAFILVYSITSRQSLEELKPIYEQICEI--KGDVESIPIMLVGNKC 119 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 D++ S+ + + + ETSAK N N++E + L+ Sbjct: 120 DESPSREVQSSEAEALART-WKCAFMETSAKLNHNVKELFQELLN 163 >2FN4-A nrPDB Length = 181 Score = 176 bits (446), Expect = 9e-45, Method: Composition-based stats. Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 7/164 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ +++ F Y TI + K+ + D RL + D AGQE FG M Y + Sbjct: 22 KSALTIQFIQSYFVSDYDPTIEDSY-TKICSVDG-IPARLDILDTAGQEEFGAMREQYMR 79 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G +VF I+ +F V K + + + + + P VL+ NK D S+ Sbjct: 80 AGHGFLLVFAINDRQSFNEVGKLFTQI---LRVKDRDDFPVVLVGNKADLESQRQVPRSE 136 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV-NHQSFP 200 F H A +FE SAK +N++EA LV + Q P Sbjct: 137 ASAFGASHHVA-YFEASAKLRLNVDEAFEQLVRAVRKYQEQELP 179 >5UHV-A nrPDB Length = 166 Score = 175 bits (445), Expect = 1e-44, Method: Composition-based stats. Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 7/157 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AGQE + M Y + Sbjct: 16 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 73 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ S +F + ++ + + + +P VL+ NKCD + Q Sbjct: 74 TGEGFLCVFAINNSKSFADINLYREQIK---RVKDSDDVPMVLVGNKCDLPT-RTVDTKQ 129 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 + K +G + ETSAK +E+A LV +I Sbjct: 130 AHELAKSYGIP-FIETSAKTRQGVEDAFYTLVREIRQ 165 >5WDQ-A nrPDB Length = 170 Score = 175 bits (444), Expect = 1e-44, Method: Composition-based stats. Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 7/157 (4%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ + + F Y TI + +V+ D T + L + D AGQE + M Y + Sbjct: 20 KSALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETCL-LDILDTAGQEEYSAMRDQYMR 77 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G VF I+ + +FE + +++ + + + +P VL+ NKCD + Q Sbjct: 78 TGEGFLCVFAINNTKSFEDIHQYREQIK---RVKDSDDVPMVLVGNKCD-AAARTVESRQ 133 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 + +G + ETSAK +E+A LV +I Sbjct: 134 AQDLARSYGIP-YIETSAKTRQGVEDAFYTLVREIRQ 169 >2Q3H-A nrPDB Length = 201 Score = 173 bits (440), Expect = 4e-44, Method: Composition-based stats. Identities = 45/173 (26%), Positives = 76/173 (43%), Gaps = 20/173 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K +++G+ VGKTS++ Y + Y T +F+ V++ D R VRLQL D AGQ+ Sbjct: 22 KCVLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSA-VVSVDGR-PVRLQLCDTAGQD 79 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKC 145 F + + Y + F + S+F+ V KW ++ + H P P +L+ + Sbjct: 80 EFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEI--RCHCPKA---PIILVGTQS 134 Query: 146 DQNKDSSQ-----------SPSQVDQ-FCKEHGFAGWFETSAKDNINIEEAAR 186 D +D P + + +E A + E SA N++E Sbjct: 135 DLREDVKVLIELDKCKEKPVPEEAAKLLAEEIKAASYIECSALTQKNLKEVFD 187 >3CLV-A nrPDB Length = 208 Score = 173 bits (439), Expect = 5e-44, Method: Composition-based stats. Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 44/210 (20%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW------------ 69 ++ +K +++GE VGK+SI+ R F ++ TIG F V+N Sbjct: 4 KKSSYKTVLLGESSVGKSSIVLRLTKDTFHENTNTTIGASFCTYVVNLNDINIKNNSNNE 63 Query: 70 ------------------------DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV 105 ++ ++ +WD AGQER+ ++ +YY+ A A VV Sbjct: 64 KNNNINSINDDNNVIITNQHNNYNENLCNIKFDIWDTAGQERYASIVPLYYRGATCAIVV 123 Query: 106 FDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 FDIS S+T + W + L S +L+ANK D +V ++ +++ Sbjct: 124 FDISNSNTLDRAKTWVNQLKI------SSNYIIILVANKID-KNKFQVDILEVQKYAQDN 176 Query: 166 GFAGWFETSAKDNINIEEAARFLVEKILVN 195 + +TSAK NI+ L E+I N Sbjct: 177 NLL-FIQTSAKTGTNIKNIFYMLAEEIYKN 205 >4DJT-A nrPDB Length = 218 Score = 171 bits (434), Expect = 2e-43, Method: Composition-based stats. Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 5/196 (2%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 + E RE +K+ +IG+ GVGKT+ I R + F ++Y AT+G D +++ Sbjct: 3 GSMERRELTYKICLIGDGGVGKTTYINRVLDGRFEKNYNATVGAVNHPVTFLDDQGNVIK 62 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 +WD AGQE+ + VYY A GA + FD++ T + + +W + + V G+ Sbjct: 63 FNVWDTAGQEKKAVLKDVYYIGASGAILFFDVTSRITCQNLARWVKEFQAVV----GNEA 118 Query: 137 PAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNH 196 P V+ ANK D S V + K +FE SAK N L Sbjct: 119 PIVVCANKIDIKNRQKISKKLVMEVLKGKN-YEYFEISAKTAHNFGLPFLHLARIFTGRP 177 Query: 197 QSFPNEENDVDKIKLD 212 +++ +++ Sbjct: 178 DLIFVSNVNLEPTEVN 193 >2ATV-A nrPDB Length = 196 Score = 166 bits (422), Expect = 6e-42, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 8/178 (4%) Query: 21 TREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLW 80 + K+ + G GVGK++++ R++ + F Y T+ + + D +V +++ Sbjct: 24 AKSAEVKLAIFGRAGVGKSALVVRFLTKRFIWEYDPTLESTYRHQATIDDE--VVSMEIL 81 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 D AGQE + + G +V+DI+ +FE VL K+ LD + + +L Sbjct: 82 DTAGQED-TIQREGHMRWGEGFVLVYDITDRGSFEEVLPLKNILD---EIKKPKNVTLIL 137 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI-NIEEAARFLVEKILVNHQ 197 + NK D + S + ++ E ++E SA NI E L ++ Sbjct: 138 VGNKADLDHSRQVSTEEGEKLATEL-ACAFYECSACTGEGNITEIFYELCREVRRRRM 194 >5XC3-A nrPDB Length = 176 Score = 166 bits (420), Expect = 9e-42, Method: Composition-based stats. Identities = 48/168 (28%), Positives = 97/168 (57%), Gaps = 6/168 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 +K+++IG GVGK+SI+ +++ + TIG FA K + + ++L +WD AGQ Sbjct: 6 YKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDTAGQ 65 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ERF ++T++YY ++G VVFD++ +F+ V W +DL H + +++ANK Sbjct: 66 ERFRSITKMYYTNSLGCLVVFDVTDRESFDDVYYWINDLRINCH----TTYYILVVANKI 121 Query: 146 DQNKDS-SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D +K++ S +++ +FC+++ + S+ ++ + +++K+ Sbjct: 122 DIDKNNWRVSENEIKKFCRDND-CDYVFASSFESDTVNNLFGKMIDKM 168 >3OES-A nrPDB Length = 201 Score = 164 bits (415), Expect = 4e-41, Method: Composition-based stats. Identities = 39/177 (22%), Positives = 80/177 (45%), Gaps = 6/177 (3%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 KV+++G VGKTS+ ++V FS+ Y T+ + K++ + L L D AGQ+ Sbjct: 26 KVVILGYRCVGKTSLAHQFVEGEFSEGYDPTVE-NTYSKIVTL-GKDEFHLHLVDTAGQD 83 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + + G +V+ ++ +F+ + L + +P VL+ NK D Sbjct: 84 EYSILPYSFIIGVHGYVLVYSVTSLHSFQVIESLYQKLHEGH---GKTRVPVVLVGNKAD 140 Query: 147 QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNEE 203 + + + + + G A + E+SA++N + ++++I S+ E Sbjct: 141 LSPEREVQAVEGKKLAESWG-ATFMESSARENQLTQGIFTKVIQEIARVENSYGQER 196 >1GWN-A nrPDB Length = 205 Score = 163 bits (413), Expect = 6e-41, Method: Composition-based stats. Identities = 43/191 (22%), Positives = 79/191 (41%), Gaps = 21/191 (10%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 GL + + K++V+G+ GKT+++ + F ++Y T+ ++ Sbjct: 13 GLVPRGSHMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTAS-FEI 71 Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKV 128 D++ + L LWD +G + N+ + Y ++ + FDISR T ++V KWK ++ Sbjct: 72 DTQR-IELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC 130 Query: 129 HLPNGSPIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAK 176 +L+ K D D S S Q K+ G A + E SA Sbjct: 131 -----PNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL 185 Query: 177 DNIN-IEEAAR 186 + N + + Sbjct: 186 QSENSVRDIFH 196 >3RAP-R nrPDB Length = 167 Score = 161 bits (409), Expect = 2e-40, Method: Composition-based stats. Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 6/155 (3%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+++ ++V F + Y TI DF K + DS V L++ D AG E+F +M +Y K Sbjct: 16 KSALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSV-LEILDTAGTEQFASMRDLYIK 73 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 G +V+ + +F+ + + + + + +P +L+ NK D + S S+ Sbjct: 74 NGQGFILVYSLVNQQSFQDIKPMRDQI---IRVKRYEKVPVILVGNKVDLESEREVSSSE 130 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +E G + ETSAK ++E +V ++ Sbjct: 131 GRALAEEWG-CPFMETSAKSKTMVDELFAEIVRQM 164 >3T5G-A nrPDB Length = 181 Score = 160 bits (406), Expect = 4e-40, Method: Composition-based stats. Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 8/171 (4%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 P+++ K+ ++G VGK+S+ ++V F Y TI F K++ + + LQ Sbjct: 2 PQSKSR--KIAILGYRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKLITVNGQEY-HLQ 57 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 L D AGQ+ + + Y + G +V+ ++ +FE + L + + IP Sbjct: 58 LVDTAGQDEYSIFPQTYSIDINGYILVYSVTSIKSFEVIKVIHGKL---LDMVGKVQIPI 114 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLV 189 +L+ NK D + + S + + A + E+SAK+N + R ++ Sbjct: 115 MLVGNKKDLHMERVISYEEGKALAESWN-AAFLESSAKENQTAVDVFRRII 164 >1M7B-A nrPDB Length = 184 Score = 160 bits (404), Expect = 7e-40, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 21/182 (11%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 + K++V+G+ GKT+++ + F ++Y T+ ++ D++ + L Sbjct: 1 GSNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTAS-FEIDTQR-IELS 58 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIP 137 LWD +G + N+ + Y ++ + FDISR T ++V KWK ++ Sbjct: 59 LWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-----PNTK 113 Query: 138 AVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNIN-IEEA 184 +L+ K D D S S Q K+ G A + E SA + N + + Sbjct: 114 MLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDI 173 Query: 185 AR 186 Sbjct: 174 FH 175 >2GF0-A nrPDB Length = 199 Score = 151 bits (381), Expect = 3e-37, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 13/188 (6%) Query: 38 KTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYK 97 K+S++ R+V F Y TI + +V++ D +++ LQ+ D G +F M R+ Sbjct: 21 KSSLVLRFVKGTFRDTYIPTIEDTYR-QVISCD-KSVCTLQITDTTGSHQFPAMQRLSIS 78 Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ 157 + +VF ++ + E + + + IP +L+ NKCD + Sbjct: 79 KGHAFILVFSVTSKQSLEELGPIYKLIVQI--KGSVEDIPVMLVGNKCD-ETQREVDTRE 135 Query: 158 VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNEENDVDKIKLDQETLR 217 +E + ETSAK N N++E + L+ + S K + R Sbjct: 136 AQAVAQE-WKCAFMETSAKMNYNVKELFQELLTLETRRNMSLN------IDGKRSGKQKR 188 Query: 218 AEN-KSQC 224 + K +C Sbjct: 189 TDRVKGKC 196 >2AL7-A nrPDB Length = 186 Score = 150 bits (380), Expect = 4e-37, Method: Composition-based stats. Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 10/175 (5%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 P + ++ ++G GKT+ + FS+ T+G + + V + Sbjct: 15 VPRGSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKVT-----KGNVTI 69 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 ++WDI GQ RF +M Y + + D + EA +++L + + P IP Sbjct: 70 KIWDIGGQPRFRSMWERYCRGVNAIVYMIDAADREKIEAS---RNELHNLLDKPQLQGIP 126 Query: 138 AVLLANKCDQNK--DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 ++L NK D D Q +++ + + S K+ NI+ ++L++ Sbjct: 127 VLVLGNKRDLPNALDEKQLIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQ 181 >5C1S-A nrPDB Length = 391 Score = 146 bits (369), Expect = 6e-36, Method: Composition-based stats. Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 28/193 (14%) Query: 1 MAGGGAGDPGLGAAAAPAP---------ETREHLF-----KVLVIGELGVGKTSIIKRYV 46 M GG G A PA TR + ++LV+G GVGKT++ + Sbjct: 24 MTGGQQMGRGSMAMIRPAHMIRPAHKSLRTRSQIIGKKEIRLLVVGSSGVGKTTLCDCFF 83 Query: 47 HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVF 106 SQ G + K + D+ +R+ + DIAGQ+ F Y V++ Sbjct: 84 ESHQSQ------GEETREKHVQIDN-DFIRISISDIAGQQSFYACDNP-YDGYDAILVMY 135 Query: 107 DISRSSTFEAVL-KWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 DI+ +F + W D+ L +++ NK DQ D + + +QF ++ Sbjct: 136 DITELKSFTDLKTMWLPDI----FLYCNIDTQIIIIGNKKDQEIDRIITRKEAEQFAQDR 191 Query: 166 GFAGWFETSAKDN 178 ++E S KD+ Sbjct: 192 -LCQFYEISTKDD 203 Score = 85.3 bits (210), Expect = 2e-17, Method: Composition-based stats. Identities = 30/190 (15%), Positives = 67/190 (35%), Gaps = 26/190 (13%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL--- 79 + ++L++G+ VGKT+ I+++ T G DF + ++ ++ Sbjct: 220 DIKIRMLMVGDQNVGKTTFIRKFAL------QDPT-GHDFMNAITTRFEMEKIKYEIIMI 272 Query: 80 -WDIAGQERFGNMT---RVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGS 134 W + + + +V+DI+ +F+ + K+ +++K S Sbjct: 273 DWGF-----YNKLLQTNPAISRTIEAILIVYDITNEESFQNIHRKYYPLINNKF-----S 322 Query: 135 PIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 + V++ K D + G + E S+KD + + L I + Sbjct: 323 DVAGVIVGYKTDLEAQRKITMGDALTLADWLG-YKYVEMSSKDTEDHSSIIKALAHSIRI 381 Query: 195 NHQSFPNEEN 204 N Sbjct: 382 NRLKIEQSYE 391 >4ILE-A nrPDB Length = 184 Score = 144 bits (363), Expect = 3e-35, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 10/170 (5%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + ++ ++G GKT+ + F++ T+G + + V ++LWDI Sbjct: 20 KEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKIT-----KGNVTIKLWDI 74 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 GQ RF +M Y + + D + EA +L + + P IP ++L Sbjct: 75 GGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKN---ELHNLLDKPQLQGIPVLVLG 131 Query: 143 NKCDQ--NKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 NK D D + +++ + + S K+ NI+ ++L++ Sbjct: 132 NKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQ 181 >2REX-B nrPDB Length = 197 Score = 142 bits (359), Expect = 9e-35, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 78/201 (38%), Gaps = 21/201 (10%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 AP+ K++++G++ GKT++++ + + Y T+ ++ + V L Sbjct: 3 APQPVVARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLET--EEQRVEL 60 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFE-AVLKWKSDLDSKVHLPNGSPI 136 LWD +G + N+ + Y ++ + FDISR T + A+ KW++++ Sbjct: 61 SLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTEILDYC-----PST 115 Query: 137 PAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKDNIN-IEE 183 +L+ K D D S S Q K+ G + E SA + I Sbjct: 116 RVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAFTSEKSIHS 175 Query: 184 AARFLVEKILVNHQSFPNEEN 204 R L P + Sbjct: 176 IFRTASMLCLNKPSPLPQKSP 196 >4WNR-A nrPDB Length = 349 Score = 134 bits (337), Expect = 4e-32, Method: Composition-based stats. Identities = 48/214 (22%), Positives = 83/214 (38%), Gaps = 27/214 (12%) Query: 2 AGGGAGDPGLGAAAAPAPETREHLF----------------KVLVIGELGVGKTSIIKRY 45 A GG+G+P + RE + KVL++G+ GKTS++KR Sbjct: 2 AMGGSGNPLEKPPIEIVKQGREAVINYFKSLEGEKKPLNEVKVLLVGDGEAGKTSLLKRL 61 Query: 46 VHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV 105 + + F + T G++ K D +++ WD GQE + + + +V Sbjct: 62 LGEGFDGNEHQTQGIN-IKKWGFKDKDKEIKVNFWDFGGQEIMHATHQFFLSKRSLYILV 120 Query: 106 FDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 D R E LK G P ++ NK D+N + + + K Sbjct: 121 LDSRRDEKAEYWLKHIRSF--------GGDSPVLVALNKIDENPSFELNRKFLQE--KYP 170 Query: 166 GFAGWFETSAKDNINIEEAARFLVEKILVNHQSF 199 G+F S K++ IE ++ L +++L Sbjct: 171 SIKGFFRISCKEDRGIEGFSQKLKKELLKVEHMQ 204 >2YC4-C nrPDB Length = 208 Score = 128 bits (322), Expect = 2e-30, Method: Composition-based stats. Identities = 48/187 (25%), Positives = 76/187 (40%), Gaps = 11/187 (5%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQ--LFSQHYRATIGVDFALKVLNW-DSRTLVRLQLWDI 82 KV V+GE VGK+++I + + F + Y T GV+ + + D+ V L L D Sbjct: 21 CKVAVVGEATVGKSALISMFTSKGSKFLKDYAMTSGVEVVVAPVTIPDTTVSVELFLLDT 80 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 AG + + Y+ A +VFD+S +FE+ W +L P+ AVL+A Sbjct: 81 AGSDLYKEQISQYWNGVYYAILVFDVSSMESFESCKAWF-ELLKSARPDRERPLRAVLVA 139 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSA----KDNINIEEAARFLVEKILVNHQS 198 NK D Q + Q +F+ SA KD + + N++ Sbjct: 140 NKTDLPPQRHQVRLDMAQDWATTNTLDFFDVSANPPGKDA---DAPFLSIATTFYRNYED 196 Query: 199 FPNEEND 205 D Sbjct: 197 KVAAFQD 203 >5HZH-A nrPDB Length = 332 Score = 125 bits (315), Expect = 1e-29, Method: Composition-based stats. Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 18/136 (13%) Query: 71 SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVL-KWKSDLDSKVH 129 V L LWD AG E + + + Y + + F + ++FE V KW ++ + H Sbjct: 199 GGKPVNLGLWDTAGLEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEV--RHH 256 Query: 130 LPNGSPIPAVLLANKCDQNKDSS------------QSPSQVDQFCKEHGFAGWFETSAKD 177 P P +L+ K D D + Q KE G + E SA Sbjct: 257 CP---NTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSALT 313 Query: 178 NINIEEAARFLVEKIL 193 ++ + +L Sbjct: 314 QRGLKTVFDEAIRAVL 329 Score = 71.8 bits (175), Expect = 2e-13, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 25/53 (47%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 K +V+G+ VGKT ++ Y F Y T+ +++ V+ S L+ Sbjct: 7 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGSGLATTLE 59 >2G3Y-A nrPDB Length = 211 Score = 123 bits (308), Expect = 8e-29, Method: Composition-based stats. Identities = 40/194 (20%), Positives = 80/194 (41%), Gaps = 9/194 (4%) Query: 11 LGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNW 69 + + + E+ ++V++IGE GVGK+++ + S + G D + L Sbjct: 23 MSTDSVISSESGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMV 82 Query: 70 DSR--TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSK 127 D T++ L +W+ G+ + + + +V+ I+ ++FE + + L Sbjct: 83 DGESATIILLDMWENKGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLR-- 138 Query: 128 VHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARF 187 IP +L+ NK D + S S+ C + ETSA N++E Sbjct: 139 -RARQTEDIPIILVGNKSDLVRCREVSVSEGRA-CAVVFDCKFIETSAAVQHNVKELFEG 196 Query: 188 LVEKILVNHQSFPN 201 +V ++ + S Sbjct: 197 IVRQVRLRRDSKEK 210 >2CJW-A nrPDB Length = 192 Score = 123 bits (308), Expect = 8e-29, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 9/181 (4%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI-GVDFALKVLNWDSR--TLVRLQLWDI 82 ++V++IGE GVGK+++ + S + G D + L D T++ L +W+ Sbjct: 7 YRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWEN 66 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 G+ + + + +V+ I+ ++FE + + L IP +L+ Sbjct: 67 KGENEW--LHDHCMQVGDAYLIVYSITDRASFEKASELRIQLR---RARQTEDIPIILVG 121 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSFPNE 202 NK D + S S+ C + ETSA N++E +V ++ + S Sbjct: 122 NKSDLVRCREVSVSEGRA-CAVVFDCKFIETSAAVQHNVKELFEGIVRQVRLRRDSKEKN 180 Query: 203 E 203 E Sbjct: 181 E 181 >2H16-A nrPDB Length = 183 Score = 120 bits (302), Expect = 4e-28, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 15/179 (8%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL 77 P KV+++G GKT+I+ ++ H TIG + V+N R Sbjct: 15 VPRGSHQEHKVIIVGLDNAGKTTILYQFSMNEVV-HTSPTIGSNVEEIVIN-----NTRF 68 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 +WDI GQE + YY VV D + E + + +L + + Sbjct: 69 LMWDIGGQESLRSSWNTYYTNTEFVIVVVDSTDR---ERISVTREELYKMLAHEDLRKAG 125 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGW-FE---TSAKDNINIEEAARFLVEKI 192 ++ ANK D + +++ QF K + A + + +++ ++ Sbjct: 126 LLIFANKQDV--KECMTVAEISQFLKLTSIKDHQWHIQACCALTGEGLCQGLEWMMSRL 182 >3CBQ-A nrPDB Length = 195 Score = 118 bits (296), Expect = 2e-27, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 6/174 (3%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ++ +FKV+++GE GVGK+++ + + D + + D + V L + Sbjct: 18 GQKDGIFKVMLVGESGVGKSTLAGTFGGLQGDSAHEPENPEDTYERRIMVD-KEEVTLVV 76 Query: 80 WDIAGQERFGN-MTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +DI Q G + + +VF ++ +F V L +P Sbjct: 77 YDIWEQGDAGGWLRDHCLQTGDAFLIVFSVTDRRSFSKVP---ETLLRLRAGRPHHDLPV 133 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +L+ NK D + S + ETSA + N E V +I Sbjct: 134 ILVGNKSDLARSREVSLEEGRHLAGTLS-CKHIETSAALHHNTRELFEGAVRQI 186 >2H57-A nrPDB Length = 190 Score = 116 bits (291), Expect = 8e-27, Method: Composition-based stats. Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 16/181 (8%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 P + + VL +G GKT+II + SQ+ TIG + + + Sbjct: 15 VPRGSKEVH-VLCLGLDNSGKTTIINKLKPSNAQSQNILPTIGFS-----IEKFKSSSLS 68 Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN--GS 134 ++D++GQ R+ N+ YYKE V D S ++ K +LD+ ++ P+ Sbjct: 69 FTVFDMSGQGRYRNLWEHYYKEGQAIIFVIDSSDR---LRMVVAKEELDTLLNHPDIKHR 125 Query: 135 PIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI---NIEEAARFLVEK 191 IP + ANK D D+ S C E+ + A D I ++E +L ++ Sbjct: 126 RIPILFFANKMDLR-DAVTSVKVSQLLCLENIKDKPWHICASDAIKGEGLQEGVDWLQDQ 184 Query: 192 I 192 I Sbjct: 185 I 185 >2NZJ-A nrPDB Length = 175 Score = 115 bits (289), Expect = 1e-26, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 8/165 (4%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 L++V+++G+ GVGKTS+ + + +G D + L D L + D Sbjct: 3 ALYRVVLLGDPGVGKTSLASLFA-GKQERDLHEQLGEDVYERTLTVDGEDT-TLVVVDTW 60 Query: 84 GQERFGNMT--RVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 E+ + +V+ I+ +FE+ + + L +P +L+ Sbjct: 61 EAEKLDKSWSQESCLQGGSAYVIVYSIADRGSFESASELRIQLR---RTHQADHVPIILV 117 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAAR 186 NK D + S + C + ETSA N+ E Sbjct: 118 GNKADLARCREVSVEEGRA-CAVVFDCKFIETSATLQHNVAELFE 161 >3Q85-A nrPDB Length = 169 Score = 112 bits (281), Expect = 1e-25, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 63/169 (37%), Gaps = 6/169 (3%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 +FKV+++GE GVGK+++ + + D + + D + V L ++DI Sbjct: 2 VFKVMLVGESGVGKSTLAGTFGGLQGDHAHEMENSEDTYERRIMVD-KEEVTLIVYDIWE 60 Query: 85 QERFGN-MTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 Q G + + +VF ++ +F V L +P +L+ N Sbjct: 61 QGDAGGWLQDHCLQTGDAFLIVFSVTDRRSFSKVP---ETLLRLRAGRPHHDLPVILVGN 117 Query: 144 KCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 K D + S + ETSA + N E V +I Sbjct: 118 KSDLARSREVSLEEGRHLAGTLS-CKHIETSAALHHNTRELFEGAVRQI 165 >1YZG-A nrPDB Length = 179 Score = 111 bits (277), Expect = 3e-25, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 61/171 (35%), Gaps = 15/171 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 KV+++G GKT+I+ +++ H TIG + V+ +WDI GQ Sbjct: 17 HKVIIVGLDNAGKTTILYQFLMNEVV-HTSPTIGSNVEEIVV-----KNTHFLMWDIGGQ 70 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 E + YY +V D E + K +L + + ++ ANK Sbjct: 71 ESLRSSWNTYYSNTEFIILVVDSIDR---ERLAITKEELYRMLAHEDLRKAAVLIFANKQ 127 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGW----FETSAKDNINIEEAARFLVEKI 192 D + +++ ++ A + + ++ +I Sbjct: 128 DM--KGCMTAAEISKYLTLSSIKDHPWHIQSCCALTGEGLCQGLEWMTSRI 176 >3Q72-A nrPDB Length = 166 Score = 107 bits (268), Expect = 3e-24, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 65/168 (38%), Gaps = 7/168 (4%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 ++KVL++G GVGK+++ + + A + + D L ++DI Sbjct: 2 VYKVLLLGAPGVGKSALARIF--GGVEDGPEAEAAGHTYDRSIVVDGEEA-SLMVYDIWE 58 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 Q+ + +V+ ++ +FE + + L +P +L+ NK Sbjct: 59 QDGGRWLPGHCMAMGDAYVIVYSVTDKGSFEKASELRVQLR---RARQTDDVPIILVGNK 115 Query: 145 CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D + S + C + ETSA + N++ +V +I Sbjct: 116 SDLVRSREVSVDEGRA-CAVVFDCKFIETSAALHHNVQALFEGVVRQI 162 >3D6T-B nrPDB Length = 171 Score = 106 bits (266), Expect = 6e-24, Method: Composition-based stats. Identities = 31/145 (21%), Positives = 67/145 (46%), Gaps = 11/145 (7%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQ--HYRATIGVDFALKVLNWDSRTL--VRLQLWD 81 K++++G G GKT+++++ + S AT+G+D + + + L +WD Sbjct: 1 MKLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWD 60 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISR-SSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 AG+E F + + + V+D+S+ + +A+ W ++ ++ S P +L Sbjct: 61 FAGREEFYSTHPHFMTQRALYLAVYDLSKGQAEVDAMKPWLFNIKARA-----SSSPVIL 115 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEH 165 + D + D Q + + + KE Sbjct: 116 VGTHLDVS-DEKQRKACMSKITKEL 139 >3C5C-A nrPDB Length = 187 Score = 103 bits (257), Expect = 6e-23, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 67/165 (40%), Gaps = 6/165 (3%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 + ++G G GK+++ +++ + F Y + ++ + V L++ D A + Sbjct: 24 LAILGRRGAGKSALTVKFLTKRFISEYDPNLEDTYSSEETV--DHQPVHLRVMDTADLDT 81 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 N Y A VV+ + +F++ + +L + IPA+LL NK D Sbjct: 82 PRNC-ERYLNWAHAFLVVYSVDSRQSFDSSSSYL-ELLALHAKETQRSIPALLLGNKLDM 139 Query: 148 NKDSSQSPSQVDQFCKEHGFAGWFETSA-KDNINIEEAARFLVEK 191 + + ++ G +FE SA D +++ V + Sbjct: 140 AQYRQVTKAEGVALAGRFG-CLFFEVSACLDFEHVQHVFHEAVRE 183 >4YLG-A nrPDB Length = 173 Score = 103 bits (256), Expect = 9e-23, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 68/173 (39%), Gaps = 11/173 (6%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 + ++L++G GKTSI+ + TIG F ++ + + + +WD Sbjct: 10 GKKEMRILMVGLDAAGKTSILYKLKLGEIVTT-IPTIG--FNVETVEY---KNISFTVWD 63 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 + GQ++ + R YY+ V D + + + + + +L ++ ++ Sbjct: 64 VGGQDKIRPLWRHYYQNTQAIIFVVDSNDR---DRIGEAREELMKMLNEDEMRNAILLVF 120 Query: 142 ANKCDQNKDSSQSPSQVDQFCKE-HGFAGWFETSAKDN-INIEEAARFLVEKI 192 ANK D + S S + + +TS N + E +L + + Sbjct: 121 ANKHDLPQAMSISEVTEKLGLQTIKNRKWYCQTSCATNGDGLYEGLDWLADNL 173 >3LRP-A nrPDB Length = 181 Score = 99 bits (248), Expect = 7e-22, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 61/166 (36%), Gaps = 15/166 (9%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 ++L++G GKT+I+ + TIG F ++ + + + +WD+ GQ+ Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTT-IPTIG--FNVETVEF---RNISFTVWDVGGQD 72 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + R YY G V D + + + +L ++ ++ ANK D Sbjct: 73 KIRPLWRHYYSNTDGLIFVVDSNDRERIDDA---REELHRMINEEELKDAIILVFANKQD 129 Query: 147 QNK----DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFL 188 ++ + + F T A + E +L Sbjct: 130 LPNAMSAAEVTEKLHLNTIRERNWFIQ--STCATRGDGLYEGFDWL 173 >1Z6X-A nrPDB Length = 180 Score = 99 bits (248), Expect = 7e-22, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 65/173 (37%), Gaps = 11/173 (6%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 + ++L++G GKT+I+ + TIG F ++ + + + +WD Sbjct: 14 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNICFTVWD 67 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 + GQ+R + + Y++ G V D + + V +L + + +L Sbjct: 68 VGGQDRIRPLWKHYFQNTQGLIFVVDSNDRERIQEVA---DELQKMLLVDELRDAVLLLF 124 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWF--ETSAKDNINIEEAARFLVEKI 192 ANK D + S + W+ T A + E +L ++ Sbjct: 125 ANKQDLPNAMAISEMTDKLGLQSLRNRTWYVQATCATQGTGLYEGLDWLSNEL 177 >5NZV-F nrPDB Length = 181 Score = 99.6 bits (247), Expect = 1e-21, Method: Composition-based stats. Identities = 31/171 (18%), Positives = 70/171 (40%), Gaps = 15/171 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G G GKT+++ + TIG F ++ + + + +WD+ GQ Sbjct: 18 MRILMVGLDGAGKTTVLYKLKLGEVITT-IPTIG--FNVETVQY---KNISFTVWDVGGQ 71 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 +R ++ R YY+ G V D + S + + + + ++ ++ ANK Sbjct: 72 DRIRSLWRHYYRNTEGVIFVVDSNDRS---RIGEAREVMQRMLNEDELRNAAWLVFANKQ 128 Query: 146 DQNKDSSQSPSQVDQ---FCKEHGFAGWFE-TSAKDNINIEEAARFLVEKI 192 D + + S +++ + + + T A + E +L + Sbjct: 129 DLPE--AMSAAEITEKLGLHSIRNRPWFIQATCATSGEGLYEGLEWLSNSL 177 >5EE5-B nrPDB Length = 171 Score = 99.6 bits (247), Expect = 1e-21, Method: Composition-based stats. Identities = 39/181 (21%), Positives = 66/181 (36%), Gaps = 21/181 (11%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 ++L++G G GKT+I+ R TIG F ++ + + ++ Q Sbjct: 1 GSHMTREMRILILGLDGAGKTTILYRLQVGEVVTT-IPTIG--FNVETVTY---KNLKFQ 54 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 +WD+ G R YY V D + + KS+L + + Sbjct: 55 VWDLGGLTSIRPYWRCYYSNTDAVIYVVDSCDR---DRIGISKSELVAMLEEEELRKAIL 111 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGW-------FETSAKDNINIEEAARFLVEK 191 V+ ANK D + + G F+TSA ++EA +LVE Sbjct: 112 VVFANKQDMEQ-----AMTSSEMANSLGLPALKDRKWQIFKTSATKGTGLDEAMEWLVET 166 Query: 192 I 192 + Sbjct: 167 L 167 >6HLU-A nrPDB Length = 974 Score = 98.0 bits (243), Expect = 3e-21, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 20/177 (11%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVL-------NWDSRTLVRLQ 78 KV +IG+ GKTS++K+ + + F T G++ K N D Sbjct: 481 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 540 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 WD GQE + + + ++ D SR+ + W ++ G P Sbjct: 541 FWDFGGQEIMHASHQFFMTRSSVYMLLLD-SRTDS--NKHYWLRHIEKY-----GGKSPV 592 Query: 139 VLLANKCDQNKDSSQSPSQVDQF--CKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +++ NK D+N + ++++ E+ + S K+ +E A+ L +L Sbjct: 593 IVVMNKIDENPSYNIEQKKINERFPAIEN---RFHRISCKNGDGVESIAKSLKSAVL 646 >3O47-A nrPDB Length = 329 Score = 98.0 bits (243), Expect = 3e-21, Method: Composition-based stats. Identities = 31/187 (16%), Positives = 67/187 (35%), Gaps = 15/187 (8%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRT 73 P + ++L++G GKT+I+ + TIG F ++ + + Sbjct: 154 PPQPRGLFGKKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---K 207 Query: 74 LVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNG 133 + +WD+ GQ++ + R Y++ G V D + E V + + +L + Sbjct: 208 NISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDEL 264 Query: 134 SPIPAVLLANKCDQN---KDSSQSPSQVDQFCKEHGFAGWFE-TSAKDNINIEEAARFLV 189 ++ ANK D + + + + + T A + E +L Sbjct: 265 RDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRHRN--WYIQATCATSGDGLYEGLDWLS 322 Query: 190 EKILVNH 196 ++ Sbjct: 323 NQLRNQK 329 >3DPU-A nrPDB Length = 535 Score = 97.6 bits (242), Expect = 4e-21, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 70/177 (39%), Gaps = 20/177 (11%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVL-------NWDSRTLVRLQ 78 KV +IG+ GKTS++K+ + + F T G++ K N D Sbjct: 42 IKVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFH 101 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 WD GQE + + + ++ D SR+ + W ++ G P Sbjct: 102 FWDFGGQEIMHASHQFFMTRSSVYMLLLD-SRTDS--NKHYWLRHIEKY-----GGKSPV 153 Query: 139 VLLANKCDQNKDSSQSPSQVDQF--CKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +++ NK D+N + ++++ E+ + S K+ +E A+ L +L Sbjct: 154 IVVMNKIDENPSYNIEQKKINERFPAIEN---RFHRISCKNGDGVESIAKSLKSAVL 207 >3LVQ-E nrPDB Length = 497 Score = 97.3 bits (241), Expect = 4e-21, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 11/135 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + T+G F ++ + + V+ +WD+ GQ Sbjct: 323 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY---KNVKFNVWDVGGQ 376 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R YY G V D + + + +L ++ ++ ANK Sbjct: 377 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEA---RQELHRIINDREMRDAIILIFANKQ 433 Query: 146 DQNKDSSQSPSQVDQ 160 D + P ++ + Sbjct: 434 DLPD--AMKPHEIQE 446 >3AQ4-A nrPDB Length = 184 Score = 97.3 bits (241), Expect = 5e-21, Method: Composition-based stats. Identities = 31/177 (17%), Positives = 67/177 (37%), Gaps = 15/177 (8%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + ++L++G GKT+I+ + TIG F ++ + + + +WD+ Sbjct: 18 KKEMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNISFTVWDV 71 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 GQ++ + R Y++ G V D + + V++ + +L ++ ++ A Sbjct: 72 GGQDKIRPLWRHYFQNTQGLIFVVDSNDR---DRVVEARDELHRMLNEDELRDAVLLVFA 128 Query: 143 NKCDQN---KDSSQSPSQV-DQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 NK D + + + H + T A + E +L I Sbjct: 129 NKQDLPNAMNAAEITDKLGLHSLRQRHWYIQ--STCATSGEGLYEGLDWLSNNIASK 183 >2A5F-A nrPDB Length = 175 Score = 96.9 bits (240), Expect = 7e-21, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 56/135 (41%), Gaps = 11/135 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + T+G F ++ + + V+ +WD+ GQ Sbjct: 14 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY---KNVKFNVWDVGGQ 67 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R YY G V D + + + +L ++ ++ ANK Sbjct: 68 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEA---RQELHRIINDREMRDAIILIFANKQ 124 Query: 146 DQNKDSSQSPSQVDQ 160 D + P ++ + Sbjct: 125 DLPD--AMKPHEIQE 137 >6FAE-B nrPDB Length = 213 Score = 96.1 bits (238), Expect = 1e-20, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 65/175 (37%), Gaps = 15/175 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + TIG F ++ + + + +WD+ GQ Sbjct: 50 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNISFTVWDVGGQ 103 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R Y++ G V D + E V + + +L + ++ ANK Sbjct: 104 DKIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQ 160 Query: 146 DQN---KDSSQSPSQVDQFCKEHGFAGWFE-TSAKDNINIEEAARFLVEKILVNH 196 D + + + + + T A + E +L ++ Sbjct: 161 DLPNAMNAAEITDKLGLHSLRHRN--WYIQATCATSGDGLYEGLDWLSNQLRNQK 213 >5UF8-A nrPDB Length = 181 Score = 95.7 bits (237), Expect = 2e-20, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 69/171 (40%), Gaps = 15/171 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + TIG F ++ + + + +WD+ GQ Sbjct: 18 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNISFTVWDVGGQ 71 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R Y++ G V D + + + + + +L ++ ++ ANK Sbjct: 72 DKIRPLWRYYFQNTQGIIFVVDSNDR---DRIAEAREELQQMLNEDELRDALLLVFANKQ 128 Query: 146 DQNKDSSQSPSQVDQFCKEHGF---AGWFE-TSAKDNINIEEAARFLVEKI 192 D + + +++ + H + + T A + E +L + Sbjct: 129 DLPN--AMNAAEITEKLGLHSIRQRPWYIQATCATTGDGLYEGLEWLSTNL 177 >6BBQ-A nrPDB Length = 520 Score = 94.2 bits (233), Expect = 4e-20, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 11/135 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + T+G F ++ + + V+ +WD+ G Sbjct: 360 MRILMLGLDAAGKTTILYKLKLGQSVTT-IPTVG--FNVETVTY---KNVKFNVWDVGGL 413 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R YY G V D + + + +L ++ ++ ANK Sbjct: 414 DKIRPLWRHYYTGTQGLIFVVDCADRDRIDEA---RQELHRIINDREMRDAIILIFANKQ 470 Query: 146 DQNKDSSQSPSQVDQ 160 D + P ++ + Sbjct: 471 DLPD--AMKPHEIQE 483 >2B6H-A nrPDB Length = 192 Score = 93.8 bits (232), Expect = 5e-20, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 64/173 (36%), Gaps = 11/173 (6%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 + ++L++G GKT+I+ + TIG F ++ + + + +WD Sbjct: 26 GKKQMRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNICFTVWD 79 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 + GQ++ + R Y++ G V D + E V + +L + ++ Sbjct: 80 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDR---ERVQESADELQKMLQEDELRDAVLLVF 136 Query: 142 ANKCDQNKDSSQSPSQVDQFCKEHGFAGWF--ETSAKDNINIEEAARFLVEKI 192 ANK D S + W+ T A + + +L ++ Sbjct: 137 ANKQDMPNAMPVSELTDKLGLQHLRSRTWYVQATCATQGTGLYDGLDWLSHEL 189 >6DFF-C nrPDB Length = 193 Score = 93.4 bits (231), Expect = 8e-20, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 15/175 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + TIG F ++ + + + +WD+ G Sbjct: 30 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNISFTVWDVGGL 83 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R Y++ G V D + E V + + +L + ++ ANK Sbjct: 84 DKIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQ 140 Query: 146 DQN---KDSSQSPSQVDQFCKEHGFAGWFE-TSAKDNINIEEAARFLVEKILVNH 196 D + + + + + T A + E +L ++ Sbjct: 141 DLPNAMNAAEITDKLGLHSLRHRN--WYIQATCATSGDGLYEGLDWLSNQLRNQK 193 >1J2J-A nrPDB Length = 166 Score = 93.4 bits (231), Expect = 8e-20, Method: Composition-based stats. Identities = 29/175 (16%), Positives = 64/175 (36%), Gaps = 15/175 (8%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G GKT+I+ + TIG F ++ + + + +WD+ G Sbjct: 3 MRILMVGLDAAGKTTILYKLKLGEIVTT-IPTIG--FNVETVEY---KNISFTVWDVGGL 56 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 ++ + R Y++ G V D + E V + + +L + ++ ANK Sbjct: 57 DKIRPLWRHYFQNTQGLIFVVDSNDR---ERVNEAREELMRMLAEDELRDAVLLVFANKQ 113 Query: 146 DQN---KDSSQSPSQVDQFCKEHGFAGWFE-TSAKDNINIEEAARFLVEKILVNH 196 D + + + + + T A + E +L ++ Sbjct: 114 DLPNAMNAAEITDKLGLHSLRHRN--WYIQATCATSGDGLYEGLDWLSNQLRNQK 166 >4BAS-A nrPDB Length = 199 Score = 91.5 bits (226), Expect = 3e-19, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 19/192 (9%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLN 68 G + +V++ G GKT+II + Q S+H AT+G + + Sbjct: 2 GSSHHHHHHMGQSKTKLQVVMCGLDNSGKTTIINQVKPAQSSSKHITATVGYN-----VE 56 Query: 69 WDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISR-------SSTFEAVLKWK 121 + V ++D+ G ++F + YY V D S S +A+LK + Sbjct: 57 TFEKGRVAFTVFDMGGAKKFRGLWETYYDNIDAVIFVVDSSDHLRLCVVKSEIQAMLKHE 116 Query: 122 SDLDSKVHLPNGSPIPAVLLANKCDQN-KDSSQSPSQVDQFCKEHGFAGW--FETSAKDN 178 D + LP G +P + ANK D ++ ++ G + F ++ Sbjct: 117 ---DIRRELPGGGRVPFLFFANKMDAAGAKTAAELVEILDLTTLMGDHPFVIFASNGLKG 173 Query: 179 INIEEAARFLVE 190 + E +L E Sbjct: 174 TGVHEGFSWLQE 185 >4V0N-A nrPDB Length = 169 Score = 90.7 bits (224), Expect = 5e-19, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 69/170 (40%), Gaps = 15/170 (8%) Query: 28 VLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 VLV+G GKT+II+R + T+G F + + + + ++D++G Sbjct: 9 VLVVGLDNSGKTTIIERLKPRPRQAAEVAPTVG--FTVDEVE---KGPLTFTVFDMSGAG 63 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 R+ + YY+EA V D + ++ + +++ + N +P + ANK D Sbjct: 64 RYRTLWEQYYREADAVVFVVDSADK---LRMVVARDEMEHMLKHSNMRKVPILYFANKKD 120 Query: 147 QNKDSSQSPSQ-VDQFCKEHGFAGWFET---SAKDNINIEEAARFLVEKI 192 + P + + ++ + +++ +L E++ Sbjct: 121 LPV--AMPPVEIAQALGLDDIKDRPWQIVPSNGLTGEGVDKGIDWLAERL 168 >1MOZ-A nrPDB Length = 183 Score = 89.9 bits (222), Expect = 7e-19, Method: Composition-based stats. Identities = 36/174 (20%), Positives = 62/174 (35%), Gaps = 21/174 (12%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++L++G G GKT+I+ R + TIG + + S ++L +WD+ GQ Sbjct: 19 LRILILGLDGAGKTTILYRLQIGEVVTT-KPTIGFN-----VETLSYKNLKLNVWDLGGQ 72 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 R YY + V D + + + +L + ++ ANK Sbjct: 73 TSIRPYWRCYYADTAAVIFVVDSTDK---DRMSTASKELHLMLQEEELQDAALLVFANKQ 129 Query: 146 DQNKDSSQSPSQVDQFCKEHGFAGW-------FETSAKDNINIEEAARFLVEKI 192 DQ + KE +SA I E +L++ I Sbjct: 130 DQP-----GALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVI 178 >4ZI3-A nrPDB Length = 190 Score = 89.9 bits (222), Expect = 8e-19, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 72/195 (36%), Gaps = 21/195 (10%) Query: 10 GLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNW 69 GL + + ++L++G GKT+++K+ + S H T G F +K + Sbjct: 2 GLLSILRKLKSAPDQEVRILLLGLDNAGKTTLLKQLASEDIS-HITPTQG--FNIKSVQS 58 Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 +L +WDI GQ + R Y++ V D + FE +L + Sbjct: 59 QG---FKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETG---QELTELLE 112 Query: 130 LPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFE-------TSAKDNINIE 182 S +P ++ ANK D + + + + + SA ++ Sbjct: 113 EEKLSCVPVLIFANKQDL-----LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQ 167 Query: 183 EAARFLVEKILVNHQ 197 + ++ + + + Sbjct: 168 DGMNWVCKNVNAKKK 182 >1KSG-A nrPDB Length = 186 Score = 89.2 bits (220), Expect = 1e-18, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 15/177 (8%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 + +E ++L++G GKT+I+K++ + T+G F +K L +L + Sbjct: 13 KQKERELRLLMLGLDNAGKTTILKKF-NGEDVDTISPTLG--FNIKTLEHRG---FKLNI 66 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 WD+ GQ+ + R Y++ G V D + + +L S + + + Sbjct: 67 WDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQ---RELQSLLVEERLAGATLL 123 Query: 140 LLANKCDQNK----DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + ANK D ++ Q ++D H SA ++ +L++ I Sbjct: 124 IFANKQDLPGALSCNAIQEALELDSIRSHHWRIQ--GCSAVTGEDLLPGIDWLLDDI 178 >3IHW-A nrPDB Length = 184 Score = 89.2 bits (220), Expect = 1e-18, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 64/170 (37%), Gaps = 13/170 (7%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 KV ++G L GK++++ RY+ + Q G K + D ++ + L + D G Sbjct: 21 LKVGIVGNLSSGKSALVHRYLTGTYVQEESPEGGR--FKKEIVVDGQSYL-LLIRDEGGP 77 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK- 144 + VF + +F+ V + N S +P VL+ + Sbjct: 78 PEL-----QFAAWVDAVVFVFSLEDEISFQTVYNY---FLRLCSFRNASEVPMVLVGTQD 129 Query: 145 -CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 S+ + + ++ET A +N+E + + +K++ Sbjct: 130 AISAANPRVIDDSRARKLSTDLKRCTYYETCATYGLNVERVFQDVAQKVV 179 >5DE3-A nrPDB Length = 169 Score = 86.5 bits (213), Expect = 8e-18, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 15/170 (8%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 ++LV+G GKT+I+K + T G F +K L+ D L++WDI GQ+ Sbjct: 2 RILVLGLDNAGKTTILKALSEED-ITTITPTQG--FNIKSLSRDG---FNLKIWDIGGQK 55 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 R Y+ + V D + S + + + +L + + +P ++ ANK D Sbjct: 56 SIRPYWRNYFDQTDALIYVIDSADSK---RLSESEFELTELLQEEKMTGVPLLVFANKQD 112 Query: 147 ----QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 D S + SAK ++E ++++++ Sbjct: 113 LVGALAADEIASTLDLTSIRDRPWQIQ--ACSAKQGTGLKEGMEWMMKQV 160 >3BH6-A nrPDB Length = 164 Score = 83.8 bits (206), Expect = 6e-17, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 66/173 (38%), Gaps = 21/173 (12%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 ++L++G GKT+++K+ + S H T G F +K + +L +WDI G Sbjct: 6 RILLLGLDNAGKTTLLKQLASEDIS-HITPTQG--FNIKSVQSQG---FKLNVWDIGGLR 59 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + R Y++ V D + FE +L + S +P ++ ANK D Sbjct: 60 KIRPYWRSYFENTDILIYVIDSADRKRFEETG---QELTELLEEEKLSCVPVLIFANKQD 116 Query: 147 QNKDSSQSPSQVDQFCKEHGFAGWFE-------TSAKDNINIEEAARFLVEKI 192 + + + + + SA +++ ++ + + Sbjct: 117 L-----LTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNV 164 >2IWR-A nrPDB Length = 178 Score = 82.6 bits (203), Expect = 1e-16, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 70/176 (39%), Gaps = 11/176 (6%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++ V+G+ GK+S+I R++ + Q T + K + D +T + L + + AG Sbjct: 8 LRLGVLGDARSGKSSLIHRFLTGSY-QVLEKT-ESEQYKKEMLVDGQTHLVL-IREEAGA 64 Query: 86 ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK- 144 + A VF + ++F+AV + L S + + L+ + Sbjct: 65 PD-----AKFSGWADAVIFVFSLEDENSFQAVSRLHGQL-SSLRGEGRGGLALALVGTQD 118 Query: 145 -CDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQSF 199 + ++ C + ++ET A +N++ + + +K++ + Sbjct: 119 RISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQ 174 >2X77-A nrPDB Length = 189 Score = 79.2 bits (194), Expect = 2e-15, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 62/180 (34%), Gaps = 21/180 (11%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 + +VL++G GKTSI+ R L + ++WD+ Sbjct: 20 DRKIRVLMLGLDNAGKTSILYRLHLGDVVTTVPT------VGVNLETLQYKNISFEVWDL 73 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 GQ R Y+ + V D + + + K +L + + ++ A Sbjct: 74 GGQTGVRPYWRCYFSDTDAVIYVVDSTDR---DRMGVAKHELYALLDEDELRKSLLLIFA 130 Query: 143 NKCDQNKDSSQSPSQVDQFCKEHGFAGWF-------ETSAKDNINIEEAARFLVEKILVN 195 NK D + + ++ G + ++S+K + E +LVE++ Sbjct: 131 NKQDLPD-----AASEAEIAEQLGVSSIMNRTWTIVKSSSKTGDGLVEGMDWLVERLREQ 185 >4C0K-A nrPDB Length = 423 Score = 78.8 bits (193), Expect = 2e-15, Method: Composition-based stats. Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 28/170 (16%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 ++ ++K VIG G GKT + + ++ + IG +F V+N + V Sbjct: 241 QSSRSVYKCHVIGPKGSGKTGMCRGFL----VEDMHKLIGKEFKTNVVNCINSVQVY--- 293 Query: 80 WDIAGQERFGNMTRVYYKEA-----------VGAFVVFDISRSSTFEAVLKWKSDLDSKV 128 GQE+ + + + A A +V+D S +FE V + Sbjct: 294 ----GQEKHLILRDIDVRHALDPLQPQEVNCDVACLVYDSSNPRSFEYVA------RIYI 343 Query: 129 HLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDN 178 S IP +++ KCD ++ Q +FC ++ S K N Sbjct: 344 KYYAESKIPVMIVGTKCDMDERRQDYLMQPSEFCDKYKLLPPHLFSLKTN 393 >1M2O-B nrPDB Length = 190 Score = 73.4 bits (179), Expect = 8e-14, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 65/178 (36%), Gaps = 24/178 (13%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K+L +G GKT+++ + AT+ + + ++ +D+ G Sbjct: 25 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEEL-AIGNIKFTTFDLGGHI 78 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + + Y+ E G + D + F+ + +LD+ ++ +P V+L NK D Sbjct: 79 QARRLWKDYFPEVNGIVFLVDAADPERFDEA---RVELDALFNIAELKDVPFVILGNKID 135 Query: 147 QNKDSSQSPSQ------------VDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + S ++ + + + S EA ++L + I Sbjct: 136 APN--AVSEAELRSALGLLNTTGSQRIEGQRPVEVFM-CSVVMRNGYLEAFQWLSQYI 190 >6GNI-B nrPDB Length = 167 Score = 72.2 bits (176), Expect = 2e-13, Method: Composition-based stats. Identities = 28/176 (15%), Positives = 64/176 (36%), Gaps = 24/176 (13%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K+L +G GKT+++ + AT+ + + ++ +D+ G Sbjct: 3 KLLFLGLDNAGKTTLLHMLKNDR-----LATLQPTWHPTSEEL-AIGNIKFTTFDLGGHI 56 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + + Y+ E G + D + F+ + +LD+ ++ +P V+L NK D Sbjct: 57 QARRLWKDYFPEVNGIVFLVDAADPERFDEA---RVELDALFNIAELKDVPFVILGNKID 113 Query: 147 QNKDSSQSPSQ------------VDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 + S ++ + + + S EA ++L + Sbjct: 114 APN--AVSEAELRSALGLLNTTGSQRIEGQRPVEVFM-CSVVMRNGYLEAFQWLSQ 166 >1F6B-A nrPDB Length = 198 Score = 70.7 bits (172), Expect = 5e-13, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 64/185 (34%), Gaps = 23/185 (12%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 + K++ +G GKT+++ QH T+ + + +D Sbjct: 22 YKKTGKLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTI-----AGMTFTTFD 75 Query: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 + G + + + Y G + D + E +L+ K +LDS + + +P ++L Sbjct: 76 LGGHIQARRVWKNYLPAINGIVFLVDCADH---ERLLESKEELDSLMTDETIANVPILIL 132 Query: 142 ANKCD------QNKDSS------QSPSQVDQFCKEHGFAGW--FETSAKDNINIEEAARF 187 NK D + + Q+ + KE F S E R+ Sbjct: 133 GNKIDRPEAISEERLREMFGLYGQTTGKGSVSLKELNARPLEVFMCSVLKRQGYGEGFRW 192 Query: 188 LVEKI 192 + + I Sbjct: 193 MAQYI 197 >2GAO-A nrPDB Length = 208 Score = 69.9 bits (170), Expect = 9e-13, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 65/181 (35%), Gaps = 25/181 (13%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 K++ +G GKT+++ QH T+ + + +D+ G E Sbjct: 37 KLVFLGLDNAGKTTLLHMLKDDRLGQH-VPTLHPTSEELTI-----AGMTFTTFDLGGHE 90 Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + + Y G + D + S +++ K +L++ + S +P ++L NK D Sbjct: 91 QARRVWKNYLPAINGIVFLVDCADHS---RLVESKVELNALMTDETISNVPILILGNKID 147 Query: 147 ------QNKDSS------QSPSQVDQFCKEHGFAG---WFETSAKDNINIEEAARFLVEK 191 + K Q+ + + KE + S E R+L + Sbjct: 148 RTDAISEEKLREIFGLYGQTTGKGNVTLKELNARPMEVFM-CSVLKRQGYGEGFRWLSQY 206 Query: 192 I 192 I Sbjct: 207 I 207 >5DI3-B nrPDB Length = 263 Score = 69.1 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 19/154 (12%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 + ++G GKT+++ + + T G + + +++++D+ G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFNSTTL-----NEGKYKIEVFDLGGGKN 60 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 + + Y E V D + FE +++ + + P + ANK D Sbjct: 61 IRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDK---PICIFANKQDL 117 Query: 148 NKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINI 181 + + + K G A +++ N+ Sbjct: 118 P-----TAAPAAEVVKGLGLAT-----CRNSHNV 141 >4M9Q-A nrPDB Length = 227 Score = 69.1 bits (168), Expect = 1e-12, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 56/154 (36%), Gaps = 19/154 (12%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 + ++G GKT+++ + + T G + + +++++D+ G + Sbjct: 7 IALLGLDNAGKTTLLNS-IQGEVDRDTTPTFGFNSTTL-----NEGKYKIEVFDLGGGKN 60 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 + + Y E V D + FE +++ + + P + ANK D Sbjct: 61 IRGVWKKYLAEVHAIVYVVDAADPGRFEESKMTMAEVLENQFMRDK---PICIFANKQDL 117 Query: 148 NKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINI 181 + + + K G A +++ N+ Sbjct: 118 P-----TAAPAAEVVKGLGLAT-----CRNSHNV 141 >6CES-A nrPDB Length = 313 Score = 58.4 bits (140), Expect = 2e-09, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 19/161 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYR---ATIGVDFALKVLNWDSRTLVRLQLWDIA 83 KVL++G+ G GKTS+ ++ R ATI V+ + + L LWD Sbjct: 9 KVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFL----GNLVLNLWDCG 64 Query: 84 GQE-----RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 GQ+ F + ++ VFD+ + + ++S L++ + + I Sbjct: 65 GQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKI-F 123 Query: 139 VLLANKCDQ--NKDSSQSPSQVDQFCKEHG---FAGWFETS 174 L+ +K D + ++ + F TS Sbjct: 124 CLV-HKMDLVQEDQRDLIFKEREEDLRRLSRPLECACFRTS 163 >6D4G-A nrPDB Length = 271 Score = 56.4 bits (135), Expect = 1e-08, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 7/96 (7%) Query: 99 AVGAFVVFDISR--SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS 156 G + D+SR + F+ LK+ S+L +++ P V++ KCD+ + Sbjct: 162 VDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK---PIVIVLTKCDEGVERYI--R 216 Query: 157 QVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 F ETSA+ N+N++ A LV+ I Sbjct: 217 DAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 252 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 13/76 (17%) Query: 8 DPGLGAAAAPAPETREHLFKVLVIGELGV---------GKTSIIKRYVH---QLFSQHYR 55 P A + R + + V+G G GK+ + R+V F + Sbjct: 1 GPLGSMMMARKQDVRIPTYNISVVGLSGTEKEKGQCGIGKSCLCNRFVRPSADEFHLDHT 60 Query: 56 ATIG-VDFALKVLNWD 70 + + DF +V+N D Sbjct: 61 SVLSTSDFGGRVVNND 76 >3C5H-A nrPDB Length = 255 Score = 56.0 bits (134), Expect = 1e-08, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 43/96 (44%), Gaps = 7/96 (7%) Query: 99 AVGAFVVFDISR--SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS 156 G + D+SR + F+ LK+ S+L +++ P V++ KCD+ + Sbjct: 163 VDGFLLGIDVSRGMNRNFDDQLKFVSNLYNQLAKTKK---PIVVVLTKCDEGVERYI--R 217 Query: 157 QVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 F ETSA+ N+N++ A LV+ I Sbjct: 218 DAHTFALSKKNLQVVETSARSNVNVDLAFSTLVQLI 253 Score = 29.8 bits (66), Expect = 0.87, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 4/43 (9%) Query: 32 GELGVGKTSIIKRYVH---QLFSQHYRATIG-VDFALKVLNWD 70 G+ G+GK+ + R+V F + + + DF +V+N D Sbjct: 35 GQCGIGKSCLCNRFVRPSADEFHLDHTSVLSTSDFGGRVVNND 77 >6IAE-A nrPDB Length = 223 Score = 55.7 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 42/209 (20%), Positives = 74/209 (35%), Gaps = 22/209 (10%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKRY--VHQLFSQHYRAT-----IGVDFALKVLNW 69 A + L K+LV+G GK+++ ++ Y T + V+ AL Sbjct: 1 GAASMSDDLVKILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRR 60 Query: 70 DSRTLVRL-----QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDL 124 R L QLWD+ G + A G VF+ + + +L W + Sbjct: 61 SGRQAAGLKKAVVQLWDVGGSSKHQAGWPAIASNADGIIYVFNPEVKGSEKELLLWYKNF 120 Query: 125 DSKVHLPNGSPIPAV-------LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK- 176 + + L+ + + + + + K+ ETS Sbjct: 121 ALNQDELDDDNNFKMRVTDGHSLIFSHHSSLPEFAVGDNAIPPMPKQLQGIRALETSLDY 180 Query: 177 DNINIEEAARFLVEKILVNHQSFPNEEND 205 + N +EA LVE+I+ + + EEND Sbjct: 181 QSDNFKEAFDALVEQIIASRLAA--EEND 207 >5YMX-A nrPDB Length = 203 Score = 55.7 bits (133), Expect = 1e-08, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 66/193 (34%), Gaps = 26/193 (13%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQL-----------FSQHYRATIGVDFALKVLN 68 +RE K++ G GKT+ + +Y++ S T+ DF L Sbjct: 7 SSREINCKIVYYGPGLCGKTTNL-QYIYNKTAAETKGKLISLSTETDRTLFFDFLPLSLG 65 Query: 69 WDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDI------SRSSTFEAVLKWKS 122 R L+ + GQ + ++ K G V D + + E + Sbjct: 66 EIRGFKTRFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLENLR---- 121 Query: 123 DLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 ++ + + IP V+ NK D + + ++ + + + A + + Sbjct: 122 -INLAEQGYDLNKIPYVIQYNKRDLPN--AVTVEEMRKALNHRNIPEY-QAVAPTGVGVF 177 Query: 183 EAARFLVEKILVN 195 + + + + +L Sbjct: 178 DTLKAVAKLVLTE 190 >3IEU-A nrPDB Length = 301 Score = 55.7 bits (133), Expect = 2e-08, Method: Composition-based stats. Identities = 26/175 (14%), Positives = 59/175 (33%), Gaps = 21/175 (12%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ-- 85 + ++G VGK++++ + + Q S + +++ + + D G Sbjct: 11 IAIVGRPNVGKSTLLNKLLGQKIS--ITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHM 68 Query: 86 ERFGNM-------TRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 E + + V + +R W D + ++ P Sbjct: 69 EEKRAINRLMNKAASSSIGDVELVIFVVEGTR---------WTPDDEMVLNKLREGKAPV 119 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 +L NK D ++ + + + F SA+ +N++ A +V K L Sbjct: 120 ILAVNKVDNVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIA-AIVRKHL 173 >6GDG-D nrPDB Length = 248 Score = 55.3 bits (132), Expect = 2e-08, Method: Composition-based stats. Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 7/134 (5%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 + ++L++G GK++I+K+ F K D V Sbjct: 29 KQVYRATHRLLLLGADNSGKSTIVKQMRILHGGSGGSGGTSGIFETK-FQVDK---VNFH 84 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 ++D+ GQ + + V D S + + L + + L I Sbjct: 85 MFDVGGQRDERRKWIQCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWL---RTISV 141 Query: 139 VLLANKCDQNKDSS 152 +L NK D + Sbjct: 142 ILFLNKQDLLAEKV 155 >2E87-A nrPDB Length = 357 Score = 54.5 bits (130), Expect = 4e-08, Method: Composition-based stats. Identities = 31/191 (16%), Positives = 62/191 (32%), Gaps = 30/191 (15%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWDIAGQ 85 V++ G VGK++++K F + +N R Q+ D G Sbjct: 170 VVIAGHPNVGKSTLLKALTTAKPEIASYP-----FTTRGINVGQFEDGYFRYQIIDTPGL 224 Query: 86 -----------ERFGNMTRVYYKEAVGAFVVFDISRSSTF--EAVLKWKSDLDSKVHLPN 132 E+ + Y +FD S F E + ++ Sbjct: 225 LDRPISERNEIEKQAILALRYL--GNLIIYIFDPSEHCGFPLEEQIHLFEEVHG-----E 277 Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +P +++ NK D + + + +F KE G + SA I+ +++ + Sbjct: 278 FKDLPFLVVINKIDVADEENIKRLE--KFVKEKGLNP-IKISALKGTGIDLVKEEIIKTL 334 Query: 193 LVNHQSFPNEE 203 + E+ Sbjct: 335 RPLAEKVAREK 345 >2GJ9-A nrPDB Length = 172 Score = 53.3 bits (127), Expect = 8e-08, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 59/195 (30%), Gaps = 34/195 (17%) Query: 22 REHLFKVLVIGELGVGKTSIIKRYVHQL--FSQHYRATIGVDFALKVLNWDSRTLVRLQL 79 H KV++ G GK+S++ + T D + ++ D L + Sbjct: 1 GSHGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTT-RDVLREHIHIDGMP---LHI 56 Query: 80 WDIAGQ-------ERFGNMTR-VYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 D AG ER G ++A + D + + + W + +++ Sbjct: 57 IDTAGLREASDEVERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIW-PEFIARL--- 112 Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVDQFCK-EHGFAGWFETSAKDNINIEEAARFLVE 190 + +P ++ NK D + E SA+ ++ ++ Sbjct: 113 -PAKLPITVVRNKADIT---------GETLGMSEVNGHALIRLSARTGEGVD-----VLR 157 Query: 191 KILVNHQSFPNEEND 205 L F Sbjct: 158 NHLKQSMGFDTNMEG 172 >5KU1-A nrPDB Length = 424 Score = 53.3 bits (127), Expect = 9e-08, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 27/160 (16%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVD-FALKVLNWDSRTLVRL 77 +T+ ++F+ VIG GK+ +++ + G + K + D ++ + Sbjct: 236 KQTQRNVFRCNVIGVKNCGKSGVLQALL------------GRNLMRQKKIREDHKSYYAI 283 Query: 78 QLWDIAGQERFGNMTRV----YYKEA----VGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 + GQE++ + + + EA +V+D+S +FE + Sbjct: 284 NTVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQ------ 337 Query: 130 LPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAG 169 S IP +++A K D ++ + FC++H Sbjct: 338 HFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPP 377 >5KSO-A nrPDB Length = 190 Score = 53.3 bits (127), Expect = 9e-08, Method: Composition-based stats. Identities = 29/160 (18%), Positives = 63/160 (39%), Gaps = 27/160 (16%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVD-FALKVLNWDSRTLVRL 77 +T+ ++F+ VIG GK+ +++ + G + K + D ++ + Sbjct: 2 KQTQRNVFRCNVIGVKNCGKSGVLQALL------------GRNLMRQKKIREDHKSYYAI 49 Query: 78 QLWDIAGQERFGNMTRV----YYKEA----VGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 + GQE++ + + + EA +V+D+S +FE + Sbjct: 50 NTVYVYGQEKYLLLHDISESEFLTEAEIICDVVCLVYDVSNPKSFEYCARIFKQ------ 103 Query: 130 LPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAG 169 S IP +++A K D ++ + FC++H Sbjct: 104 HFMDSRIPCLIVAAKSDLHEVKQEYSISPTDFCRKHKMPP 143 >2LKD-A nrPDB Length = 178 Score = 53.0 bits (126), Expect = 9e-08, Method: Composition-based stats. Identities = 25/170 (14%), Positives = 56/170 (32%), Gaps = 22/170 (12%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V ++G + GKT+++ H ++ I + + + ++ D G E Sbjct: 11 VTIMGHVDHGKTTLLDAIRHSKVTEQEAGGITQHIGAYQVTVNDK---KITFLDTPGHEA 67 Query: 88 FGNMTRVYYKEAVG---AFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 F M + A +V ++ + +P ++ NK Sbjct: 68 FTTMRA---RGAQVTDIVILVVAADDGV--------MPQTVEAINHAKAANVPIIVAINK 116 Query: 145 CDQ---NKDSSQSPS-QVDQFCKEHGFAG-WFETSAKDNINIEEAARFLV 189 D+ N D + + +E G + + SAK ++ ++ Sbjct: 117 MDKPEANPDRVMQELMEYNLVPEEWGGDTIFCKLSAKTKEGLDHLLEMIL 166 >5KUT-A nrPDB Length = 189 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 27/176 (15%), Positives = 55/176 (31%), Gaps = 42/176 (23%) Query: 15 AAPAPETREHLFKVLVIGELGVGKTSIIKRYVH---QLFSQHYRATIGVDFALKVLNWDS 71 + L KV +G GVGK++ ++ ++ + +A+ + + Sbjct: 1 MKGQTQRSVLLCKV--VGACGVGKSAFLQAFLGRGLGHQDTREQP---PGYAIDTVQVN- 54 Query: 72 RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAF------------VVFDISRSSTFEAVLK 119 GQE++ + V G ++FD S +F Sbjct: 55 ------------GQEKYLILCEV---GTDGLLATSLDATCDVACLMFDGSDPKSFAHCAS 99 Query: 120 WKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSA 175 H P + +++K D + + S +FC++H S Sbjct: 100 ------VYKHHYMDGQTPCLFVSSKADLPEGVAVSGPSPAEFCRKHRLPAPVPFSC 149 >1MKY-A nrPDB Length = 439 Score = 51.8 bits (123), Expect = 2e-07, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 73/212 (34%), Gaps = 38/212 (17%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGV------DFALKVLNWDSRTLVRLQLWD 81 VL++G VGK+++ + V + +A + D + W + +L D Sbjct: 4 VLIVGRPNVGKSTLFNKLVKKK-----KAIVEDEEGVTRDPVQDTVEWYGK---TFKLVD 55 Query: 82 IAG---------QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 G ++ +T +EA V D R T + +S Sbjct: 56 TCGVFDNPQDIISQKMKEVTLNMIREADLVLFVVDGKRGIT--------KEDESLADFLR 107 Query: 133 GSPIPAVLLANKCDQ--NKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 S + +L+ANK + + P GF SA+ NIN++ +++ Sbjct: 108 KSTVDTILVANKAENLREFEREVKPE-----LYSLGFGEPIPVSAEHNINLDTMLETIIK 162 Query: 191 KILVNHQSFPNEENDVDKIKLDQETLRAENKS 222 K+ ++ D IK+ KS Sbjct: 163 KLEEKGLDLESKPEITDAIKVAIVGRPNVGKS 194 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 61/188 (32%), Gaps = 29/188 (15%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHY-RATIGVDFALKVLNWD 70 G PE + KV ++G VGK+++ +++ + D + D Sbjct: 168 GLDLESKPEITDA-IKVAIVGRPNVGKSTLFNAILNKERALVSPIPGTTRDPVDDEVFID 226 Query: 71 SRTLVRLQLWDIAGQERFGNMTR------VYYK------EAVGAFVVFDISRSSTFEAVL 118 R V D AG R + Y+ +A +V D ++ T + Sbjct: 227 GRKYV---FVDTAGLRRKSRVEPRTVEKYSNYRVVDSIEKADVVVIVLDATQGITRQD-- 281 Query: 119 KWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH----GFAGWFETS 174 L +V++ NK D + + + +E ++ TS Sbjct: 282 ------QRMAGLMERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTS 335 Query: 175 AKDNINIE 182 A NI+ Sbjct: 336 ADKGWNID 343 >3T1O-A nrPDB Length = 198 Score = 51.8 bits (123), Expect = 3e-07, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 63/197 (31%), Gaps = 17/197 (8%) Query: 12 GAAAAPAPETREHLFKVLVIGELGVGKTS----IIKRYVHQLFSQ------HYRATIGVD 61 G+ + RE FK++ G GKT+ I + + T+ D Sbjct: 1 GSMSTINFANREINFKIVYYGPGLSGKTTNLKWIYSKVPEGRKGEMVSLATEDERTLFFD 60 Query: 62 FALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISR---SSTFEAVL 118 F + R L+ + GQ + ++ + G V D + + E++ Sbjct: 61 FLPLDIGEVKGFKTRFHLYTVPGQVFYNASRKLILRGVDGIVFVADSAPNRLRANAESMR 120 Query: 119 KWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDN 178 + +L + +P V+ NK D + V G E A + Sbjct: 121 NMRENLAE--YGLTLDDVPIVIQVNKRDLPD--ALPVEMVRAVVDPEGKFPVLEAVATEG 176 Query: 179 INIEEAARFLVEKILVN 195 + E + + +L Sbjct: 177 KGVFETLKEVSRLVLAR 193 >6G79-A nrPDB Length = 225 Score = 51.4 bits (122), Expect = 3e-07, Method: Composition-based stats. Identities = 28/198 (14%), Positives = 61/198 (30%), Gaps = 39/198 (19%) Query: 27 KVLVIGELGVGKTSIIKR----YVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 K+L++G GK++I+K+ + S + F K + +L+D+ Sbjct: 32 KLLLLGADNSGKSTIVKQMKIIHGGSGGSGGTTGIVETHFTFK--------NLHFRLFDV 83 Query: 83 AGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA 142 GQ +++ D+S + + + DS + +L Sbjct: 84 GGQRSERKKWIHCFEDVTAIIFCVDLSD---YNRMHESLMLFDSICNNKFFIDTSIILFL 140 Query: 143 NKCDQNKDSSQ---------------SPSQVDQFCK--------EHGFAGWFE-TSAKDN 178 NK D + + + + + + T A D Sbjct: 141 NKKDLFGEKIKKSPLTICFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDT 200 Query: 179 INIEEAARFLVEKILVNH 196 N + + + I+ N+ Sbjct: 201 NNAQVIFDAVTDIIIANN 218 >2CXX-A nrPDB Length = 190 Score = 51.0 bits (121), Expect = 4e-07, Method: Composition-based stats. Identities = 37/200 (18%), Positives = 67/200 (33%), Gaps = 48/200 (24%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG--- 84 ++ G VGK+++I R + + R GV + + W + ++ D+ G Sbjct: 4 IIFAGRSNVGKSTLIYRLTGKKVRRGKRP--GVTRKIIEIEWKNHKII-----DMPGFGF 56 Query: 85 --------QERFGNMTRVYY----KEAVGAFVVFDISRSSTFEAVLKW--KSDLDSKVHL 130 QER + + K A +V D + E + +W + ++ V Sbjct: 57 MMGLPKEVQERIKDEIVHFIEDNAKNIDVAVLVVD--GKAAPEIIKRWEKRGEIPIDVEF 114 Query: 131 PN---GSPIPAVLLANKCD-----------QNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176 IP ++ NK D + S++D+ + SAK Sbjct: 115 YQFLRELDIPTIVAVNKLDKIKNVQEVINFLAEKFEVPLSEIDKV--------FIPISAK 166 Query: 177 DNINIEEAARFLVEKILVNH 196 NIE + E I Sbjct: 167 FGDNIERLKNRIFEVIRERQ 186 >4ARZ-A nrPDB Length = 310 Score = 49.9 bits (118), Expect = 8e-07, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 46/129 (35%), Gaps = 14/129 (10%) Query: 27 KVLVIGELGVGKTSIIKRYVHQ--LFSQ-HYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 K+L++G G GK+S+ F ATI V+ + + L LWD Sbjct: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL----GNMTLNLWDCG 63 Query: 84 GQE-----RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 GQ+ F ++ VFD+ + + + + L + I Sbjct: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 Query: 139 VLLANKCDQ 147 +L +K D Sbjct: 124 LL--HKMDL 130 >5YT0-A nrPDB Length = 364 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 71/211 (33%), Gaps = 52/211 (24%) Query: 3 GGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRY------------VHQLF 50 GGG G+ L V+V+G + GKT+++ + + Q Sbjct: 6 GGGDGERRLRQPI------------VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHI 53 Query: 51 SQHYRATIGVDFALKVLN-WDSRTLVRLQL-----WDIAGQERFGNMTRVYYKEAVGAFV 104 D K+ V+L + D G E F N+ R A A + Sbjct: 54 GASIVP---ADVIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAIL 110 Query: 105 VFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKE 164 V DI + +K + L +P ++ ANK D ++ + K Sbjct: 111 VVDI--------MEGFKPQTYEALELLKERRVPFLIAANKID----------RIPGW-KP 151 Query: 165 HGFAGWFETSAKDNINIEEAARFLVEKILVN 195 + A + ET + + + E V +I+ Sbjct: 152 NPDAPFIETIRRQDPKVREILEQRVYEIVGK 182 >5FG3-A nrPDB Length = 623 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 71/211 (33%), Gaps = 52/211 (24%) Query: 3 GGGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRY------------VHQLF 50 GGG G+ L V+V+G + GKT+++ + + Q Sbjct: 6 GGGDGERRLRQPI------------VVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHI 53 Query: 51 SQHYRATIGVDFALKVLN-WDSRTLVRLQL-----WDIAGQERFGNMTRVYYKEAVGAFV 104 D K+ V+L + D G E F N+ R A A + Sbjct: 54 GASIVP---ADVIEKIAEPLKKVIPVKLVIPGLLFIDTPGHELFSNLRRRGGSVADFAIL 110 Query: 105 VFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKE 164 V DI + +K + L +P ++ ANK D ++ + K Sbjct: 111 VVDI--------MEGFKPQTYEALELLKERRVPFLIAANKID----------RIPGW-KP 151 Query: 165 HGFAGWFETSAKDNINIEEAARFLVEKILVN 195 + A + ET + + + E V +I+ Sbjct: 152 NPDAPFIETIRRQDPKVREILEQRVYEIVGK 182 >5LAD-A nrPDB Length = 404 Score = 49.1 bits (116), Expect = 1e-06, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 27/180 (15%) Query: 28 VLVIGELGVGKTSIIKRYVHQ--LFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 ++V G VGK+S + V Q Y T D K + V L D G Sbjct: 12 IVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTT-TDPVYKSMELYPVGPVTL--VDTPGL 68 Query: 86 ERFGNM--------TRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 + G + RV+Y+ A +V D S + +E D V+L IP Sbjct: 69 DDVGELGRLRVEKARRVFYR-ADCGILVTD-SEPTPYE---------DDVVNLFKEMEIP 117 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 V++ NK D + + ++ + A SA ++ + + E + + + Sbjct: 118 FVVVVNKIDVLGEKA---EELKGLYESRYEAKVLLVSALQKKGFDDIGKTISEILPGDEE 174 >2Q3F-A nrPDB Length = 181 Score = 48.7 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 24/183 (13%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWDIAG 84 ++L++G GK+SI K H++ T+ ++ K+ D + + V Q+WD G Sbjct: 6 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKICREDVSNSSFVNFQIWDFPG 62 Query: 85 QERFGNMTRVY---YKEAVGAFVVFDISRSSTF-EAVLKWKSDLDSKVHLPNGSPIPAVL 140 Q F + T Y ++ V I + EA+ + L + I + Sbjct: 63 QIDFFDPTFDYEMIFRGTGALIFV--IDSQDDYMEALARLH--LTVTRAYKVNTDINFEV 118 Query: 141 LANKCD-QNKDSSQSPSQV------DQFCK---EHGFAGWFETSAKDNINIEEAARFLVE 190 +K D + D + D E ++ TS D +I EA +V+ Sbjct: 119 FIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYD-HSIFEAFSKVVQ 177 Query: 191 KIL 193 K++ Sbjct: 178 KLI 180 >3J8G-X nrPDB Length = 490 Score = 48.3 bits (114), Expect = 2e-06, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 59/178 (33%), Gaps = 31/178 (17%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRA--TIGVDFALKVLNWDSRTLVRLQLWDIA 83 K+ ++G VGK+++ R + + Y T + + D R V L D A Sbjct: 203 IKLAIVGRPNVGKSTLTNRILGEERVVVYDMPGTTRDSIYI-PMERDGREYV---LIDTA 258 Query: 84 G----------QERFGNMTRV-YYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 G E+F + + ++A +V D + DL + N Sbjct: 259 GVRKRGKITDAVEKFSVIKTLQAIEDANVVMLVIDAREGIS-------DQDLSLLGFILN 311 Query: 133 GSPIPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFE---TSAKDNINIEEAAR 186 +++ NK D +++ + + F GF + SA + Sbjct: 312 SGRSLVIVV-NKWDGLSQEVKEQVKETLDF--RLGFIDFARVHFISALHGSGVGNLFE 366 Score = 36.4 bits (83), Expect = 0.009, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 41/138 (29%), Gaps = 23/138 (16%) Query: 28 VLVIGELGVGKTSIIKRY--VHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 V ++G VGK+++ R + + D + R + + D G Sbjct: 5 VALVGRPNVGKSTLFNRLTRTRDALVADF-PGLTRDRKYGRAEIEGREFICI---DTGGI 60 Query: 86 E--------RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 + R + + +EA + D ++ P Sbjct: 61 DGTEDGVETRMAEQSLLAIEEADVVLFMVDAR--------AGLMPADEAIAKHLRSREKP 112 Query: 138 AVLLANKCD-QNKDSSQS 154 L+ANK D + D + Sbjct: 113 TFLVANKTDGLDPDQAVV 130 >3CB4-D nrPDB Length = 599 Score = 48.0 bits (113), Expect = 3e-06, Method: Composition-based stats. Identities = 35/218 (16%), Positives = 65/218 (29%), Gaps = 40/218 (18%) Query: 37 GKTSI---IKRYVHQLFSQHYRATI----------GVDFALKVLNWD----SRTLVRLQL 79 GK+++ I + L + A + G+ + + D +L Sbjct: 16 GKSTLSDRIIQICGGLSDREMEAQVLDSMDLERERGITIKAQSVTLDYKASDGETYQLNF 75 Query: 80 WDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 D G F GA +V D + + + + + V Sbjct: 76 IDTPGHVDFSYEVSRSLAACEGALLVVDAGQGVEAQTLAN--------CYTAMEMDLEVV 127 Query: 140 LLANKCDQ-NKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI------ 192 + NK D D + +++ SAK + +++ LV I Sbjct: 128 PVLNKIDLPAADPERVAEEIEDIV-GIDATDAVRCSAKTGVGVQDVLERLVRDIPPPEGD 186 Query: 193 -------LVNHQSFPNEENDVDKIKLDQETLRAENKSQ 223 L+ F N V I++ TLR +K + Sbjct: 187 PEGPLQALIIDSWFDNYLGVVSLIRIKNGTLRKGDKVK 224 >3R9W-A nrPDB Length = 307 Score = 47.2 bits (111), Expect = 5e-06, Method: Composition-based stats. Identities = 27/188 (14%), Positives = 61/188 (32%), Gaps = 23/188 (12%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDS-RTLVRLQLWDIAGQ- 85 V ++G+ VGK++++ + G ++VL + ++ D G Sbjct: 12 VAIVGKPNVGKSTLLNNLL-GTKVSIISPKAG-TTRMRVLGVKNIPNEAQIIFLDTPGIY 69 Query: 86 ---------ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKS-DLDSKVHLPNGSP 135 + + +EA + D + W+ D + + Sbjct: 70 EPKKSDVLGHSMVEIAKQSLEEADVILFMIDAT--------EGWRPRDEEIYQNFIKPLN 121 Query: 136 IPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 P +++ NK D + P + K SA N++E + +++ + Sbjct: 122 KPVIVVINKIDKIGPAKNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLPE 181 Query: 195 NHQSFPNE 202 FP + Sbjct: 182 GEPLFPED 189 >3GEH-A nrPDB Length = 462 Score = 47.2 bits (111), Expect = 6e-06, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 53/174 (30%), Gaps = 43/174 (24%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQ--LFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 KV ++G VGK+S++ + T D L + +Q+ D A Sbjct: 225 LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTT-RDVVESQLVVGG---IPVQVLDTA 280 Query: 84 G------Q------ERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKS---DLDSKV 128 G Q ER A + T +A W + ++ +V Sbjct: 281 GIRETSDQVEKIGVERSRQAANT----ADLVLL--------TIDAATGWTTGDQEIYEQV 328 Query: 129 HLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 P +L+ NK D + + + + T+A I+ Sbjct: 329 KHR-----PLILVMNKIDLVEKQLITSLEYPE-----NITQIVHTAAAQKQGID 372 >4NCL-A nrPDB Length = 457 Score = 46.8 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 29/137 (21%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQH----YRATIGVDF--------ALKVLNWDSRTLV 75 ++G + GKT ++ + + IG + V+N D + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 76 R---LQLWDIAGQERFGNMTRVYYKEAVGA---FVVFDISRSSTFEAVLKWKSDLDSKVH 129 + L + D G E F N+ + + +V DI + + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDI--------MHGLEPQTIESLR 121 Query: 130 LPNGSPIPAVLLANKCD 146 L P V+ NK D Sbjct: 122 LLRERKTPFVVALNKID 138 >4N3G-A nrPDB Length = 603 Score = 46.8 bits (110), Expect = 7e-06, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 29/137 (21%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQH----YRATIGVDF--------ALKVLNWDSRTLV 75 ++G + GKT ++ + + IG + V+N D + Sbjct: 13 CCILGHVDTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 76 R---LQLWDIAGQERFGNMTRVYYKEAVGA---FVVFDISRSSTFEAVLKWKSDLDSKVH 129 + L + D G E F N+ + + +V DI + + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDI--------MHGLEPQTIESLR 121 Query: 130 LPNGSPIPAVLLANKCD 146 L P V+ NK D Sbjct: 122 LLRERKTPFVVALNKID 138 >4TN1-B nrPDB Length = 345 Score = 46.8 bits (110), Expect = 8e-06, Method: Composition-based stats. Identities = 24/137 (17%), Positives = 44/137 (32%), Gaps = 29/137 (21%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQH----YRATIGVDF--------ALKVLNWDSRTLV 75 ++G + GKT ++ + + IG + V+N D + Sbjct: 13 CCILGHVRTGKTKLLDKIRQTNVQEGEAGGITQQIGATYFPVEAIKQKTAVVNKDGKFEF 72 Query: 76 R---LQLWDIAGQERFGNMTRVYYKEAVGA---FVVFDISRSSTFEAVLKWKSDLDSKVH 129 + L + D G E F N+ + + +V DI + + + Sbjct: 73 KVPGLLIIDTPGHESFSNLRS---RGSSLCNIAILVVDI--------MHGLEPQTIESLR 121 Query: 130 LPNGSPIPAVLLANKCD 146 L P V+ NK D Sbjct: 122 LLRERKTPFVVALNKID 138 >2DYK-A nrPDB Length = 161 Score = 46.8 bits (110), Expect = 8e-06, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 43/134 (32%), Gaps = 27/134 (20%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLF-SQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 + KV+++G VGK+S+ R + + + D V+ D R L D Sbjct: 1 MHKVVIVGRPNVGKSSLFNRLLKKRSAVVADVPGVTRDLKEGVVETDRG---RFLLVDTG 57 Query: 84 G-----------QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 G QE+ V+F + + ++ + Sbjct: 58 GLWSGDKWEKKIQEKVDRALE------DAEVVLFAVDGRAELTQADY---EVAEYLRRKG 108 Query: 133 GSPIPAVLLANKCD 146 P +L+A K D Sbjct: 109 K---PVILVATKVD 119 >5ZZM-A nrPDB Length = 426 Score = 46.8 bits (110), Expect = 8e-06, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 61/196 (31%), Gaps = 44/196 (22%) Query: 20 ETREHLFK-----VLVIGELGVGKTSIIKR------YVHQLFSQHYRATIGVDFALKVLN 68 + R+ K V ++G GK+++ R Y T+ + ++ Sbjct: 187 QGRQSRIKADVPTVSLVGYTNAGKSTLFNRITEARVYAADQLFATLDPTL------RRID 240 Query: 69 WDSRTLVRLQLWDIAGQER---------FGNMTRVYYKEAVGAFVVFDISR---SSTFEA 116 L D G R F + ++A V D + EA Sbjct: 241 VADVGETVLA--DTVGFIRHLPHDLVAAFKATLQET-RQATLLLHVIDAADVRVQENIEA 297 Query: 117 VLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAK 176 V ++D+ IP +L+ NK D +D + E SA+ Sbjct: 298 VNTVLEEIDAH-------EIPTLLVMNKIDMLEDFEPRIDR-----DEENKPNRVWLSAQ 345 Query: 177 DNINIEEAARFLVEKI 192 I + + L E++ Sbjct: 346 TGAGIPQLFQALTERL 361 >3PR1-A nrPDB Length = 195 Score = 46.8 bits (110), Expect = 8e-06, Method: Composition-based stats. Identities = 32/201 (15%), Positives = 66/201 (32%), Gaps = 43/201 (21%) Query: 19 PETREHLFK--VLVIGELGVGKTSIIKRYVHQL--FSQHYR-ATIGVDFAL-----KVLN 68 P K V +G VGK+S++ ++ F T ++F L ++ Sbjct: 15 PGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSINFYLVNSKYYFVD 74 Query: 69 WDSRTLVRLQ-----LWDIAGQERFGNMTRVYYKEA----VGAFVVFD--ISRSSTFEAV 117 ++ LW + Y+K + +V D I + + Sbjct: 75 LPGYGYAKVSKKERMLW--------KRLVEDYFKNRWSLQMVFLLV-DGRIPPQDSDLMM 125 Query: 118 LKWKSDLDSKVHLPNGSPIPAVLLANKCD--QNKDSSQSPSQVDQFCKEHGFAGWFETSA 175 ++W L IP ++ K D + + ++ + + ++G TS+ Sbjct: 126 VEWMKSL----------NIPFTIVLTKMDKVKMSERAKKLEEHRKVFSKYGEYTIIPTSS 175 Query: 176 KDNINIEEAARFLVEKILVNH 196 I E L+ +L + Sbjct: 176 VTGEGISE-LLDLISTLLKEN 195 >1WF3-A nrPDB Length = 301 Score = 46.8 bits (110), Expect = 8e-06, Method: Composition-based stats. Identities = 32/210 (15%), Positives = 65/210 (30%), Gaps = 56/210 (26%) Query: 28 VLVIGELGVGKTSIIKRYVHQLF---SQHYRAT------IGVDFALKVLNWDSRTLVRLQ 78 V ++G+ VGK++++ + S + T I + +++ D+ L + Sbjct: 10 VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTEGRRQIVFVDTPGLHKPM 69 Query: 79 LWDIAG----QERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 D G QE + + + V D+ T E +L ++ P Sbjct: 70 --DALGEFMDQEVYEALA-----DVNAVVWVVDLRHPPTPED------ELVARALKPLVG 116 Query: 135 PIPAVLLANKCDQN-------------------------KDSSQSPSQVDQFCKEHGFAG 169 +P +L+ NK D + + + D Sbjct: 117 KVPILLVGNKLDAAKYPEEAMKAYHELLPEAEPRMLSALDERQVAELKADLLALMPEGPF 176 Query: 170 WF-ETSAKDNINIEEAARFLVEKILVNHQS 198 ++ E AK ++ V +IL Sbjct: 177 FYPEDYAKS----DQTFGEWVAEILREEAM 202 >3K53-A nrPDB Length = 271 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 32/194 (16%), Positives = 62/194 (31%), Gaps = 31/194 (15%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V ++G VGKT+I + V+ ++ + + + D+ G Sbjct: 6 VALVGNPNVGKTTIFNALTGLRQHVGNWPGVTVEKKEGIMEYREK---EFLVVDLPG--- 59 Query: 88 FGNMTRVYYK-----------EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 ++T A + D + +L + L Sbjct: 60 IYSLTAHSIDELIARNFILDGNADVIVDIVDSTC---------LMRNLFLTLELFEMEVK 110 Query: 137 PAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFL---VEKIL 193 +L+ NK D K + + + KE G T+AK +EE R + E + Sbjct: 111 NIILVLNKFDLLKKKG-AKIDIKKMRKELGVPV-IPTNAKKGEGVEELKRMIALMAEGKV 168 Query: 194 VNHQSFPNEENDVD 207 + P + D++ Sbjct: 169 TTNPIIPRYDEDIE 182 >1XZP-A nrPDB Length = 482 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 33/202 (16%) Query: 26 FKVLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 +++++G+ VGK++++ R + D + + + ++ D AG Sbjct: 244 LRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVIRG---ILFRIVDTAG 300 Query: 85 --------QERFGNMTRVY-YKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 ER G + ++A V D S E K + +K + Sbjct: 301 VRSETNDLVERLGIERTLQEIEKADIVLFVLDASSPLDEED-RKILERIKNKRY------ 353 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWF-ETSAKDNINIEEAARFLVEKILV 194 +++ NK D ++ + G + SA +E+ L E I Sbjct: 354 ---LVVINKVD-----VVEKINEEEIKNKLGTDRHMVKISALKGEGLEK----LEESIYR 401 Query: 195 NHQSFPNEENDVDKIKLDQETL 216 Q +D L Q+ L Sbjct: 402 ETQEIFERGSDSLITNLRQKQL 423 >2GTP-A nrPDB Length = 323 Score = 46.0 bits (108), Expect = 1e-05, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 50/183 (27%), Gaps = 38/183 (20%) Query: 52 QHYRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV 105 +Y T +V + + +++D+ GQ ++ Sbjct: 134 PNYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGGQRSERKKWIHCFEGVTAIIFC 193 Query: 106 FDISR-------SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQ----- 153 +S + + DS + + +L NK D ++ + Sbjct: 194 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTDTSIILFLNKKDLFEEKIKKSPLT 253 Query: 154 ----------SPSQVDQF---------CKEHGFAGWFE-TSAKDNINIEEAARFLVEKIL 193 + + + ++ + T A D N++ + + I+ Sbjct: 254 ICYPEYAGSNTYEEAAAYIQCQFEDLNKRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 313 Query: 194 VNH 196 N+ Sbjct: 314 KNN 316 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 14/18 (77%) Query: 27 KVLVIGELGVGKTSIIKR 44 K+L++G GK++I+K+ Sbjct: 4 KLLLLGAGESGKSTIVKQ 21 >1LNZ-A nrPDB Length = 342 Score = 45.6 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 72/210 (34%), Gaps = 19/210 (9%) Query: 9 PGLGAAAAPAPETREHL-FKVL----VIGELGVGKTSIIKRYVHQL-FSQHYRATIGVDF 62 P L P E L KVL ++G VGK++++ Y T V Sbjct: 137 PQLSENGEPGKERYIVLELKVLADVGLVGFPSVGKSTLLSVVSSAKPKIADYHFTTLVPN 196 Query: 63 ALKVLNWDSRTLVRLQLWD-IAGQERFGNMTRVYYKEAV---GAFVVFDISR---SSTFE 115 V D R+ V L I G + + + + V D+S ++ Sbjct: 197 LGMVETDDGRSFVMADLPGLIEGAHQGVGLGHQFLRHIERTRVIVHVIDMSGLEGRDPYD 256 Query: 116 AVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSA 175 L +L + + P +++ANK D + + + ++ ++ F SA Sbjct: 257 DYLTINQELSE--YNLRLTERPQIIVANKMDMPEAAENLEAFKEKLTDDYPV---FPISA 311 Query: 176 KDNINIEEAARFLVEKILVNHQSFPNEEND 205 + E + + L N FP + + Sbjct: 312 VTREGLRELLFEVANQ-LENTPEFPLYDEE 340 >4V7F-o nrPDB Length = 647 Score = 45.6 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 66/214 (30%), Gaps = 30/214 (14%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWDIAG- 84 +L+ G VGK+S ++ + F K L +R Q D G Sbjct: 170 LLICGYPNVGKSSFLRCITKS--DVDVQP---YAFTTKSLYVGHFDYKYLRFQAIDTPGI 224 Query: 85 ----QERFGNMTRVYYKE----AVGAFVVFDISRSSTF--EAVLKWKSDLDSKVHLPNGS 134 E N+ D+S F EA +K + + Sbjct: 225 LDRPTEEMNNIEMQSIYAIAHLRSCVLYFMDLSEQCGFTIEAQVKLFHSIKPLFANKS-- 282 Query: 135 PIPAVLLANKCDQNKDSSQSPSQVDQF--CKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +++ NK D + + KE +S + N+ E EK+ Sbjct: 283 ---VMVVINKTDIIRPEDLDEERAQLLESVKEVPGVEIMTSSCQLEENVMEVRNKACEKL 339 Query: 193 LVNH-----QSFPNEENDVDKIKLDQETLRAENK 221 L + +S N ++KI + Q R + K Sbjct: 340 LASRIENKLKSQSRINNVLNKIHVAQPQARDDVK 373 >3LLU-A nrPDB Length = 196 Score = 45.3 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 69/182 (37%), Gaps = 22/182 (12%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWDIAG 84 ++L++G GK+SI K H++ T+ ++ K+ D + + V Q+WD G Sbjct: 22 RILLMGLRRSGKSSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 78 Query: 85 QERFGNMTRVY---YKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 Q F + T Y ++ V D EA+ + + + + Sbjct: 79 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFI- 136 Query: 142 ANKCD-QNKDSSQSPSQV------DQFCK---EHGFAGWFETSAKDNINIEEAARFLVEK 191 +K D + D + D E ++ TS D +I EA +V+K Sbjct: 137 -HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYD-HSIFEAFSKVVQK 194 Query: 192 IL 193 ++ Sbjct: 195 LI 196 >6GB2-BC nrPDB Length = 657 Score = 45.3 bits (106), Expect = 2e-05, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 63/190 (33%), Gaps = 42/190 (22%) Query: 6 AGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRA---TIGVDF 62 DP L +P V ++G + GKT+++ F + A T G+ Sbjct: 100 QADPALLTPRSPV---------VTIMGHVDHGKTTLL-----DKFRKTQVAAVETGGITQ 145 Query: 63 ALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVG---AFVVFDISR---SSTFEA 116 + + ++ D G F M + A +V T E+ Sbjct: 146 HIGAFLVSLPSGEKITFLDTPGHAAFSAMRA---RGAQVTDIVVLVVAADDGVMKQTVES 202 Query: 117 VLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNK-DSSQSPSQVDQF---CKEHGF-AGWF 171 + + +P +L NKCD+ + D + ++ + C+++G Sbjct: 203 IQ-----------HAKDAQVPIILAVNKCDKAEADPEKVKKELLAYDVVCEDYGGDVQAV 251 Query: 172 ETSAKDNINI 181 SA N+ Sbjct: 252 PVSALTGDNL 261 >4UJC-AB nrPDB Length = 627 Score = 44.9 bits (105), Expect = 3e-05, Method: Composition-based stats. Identities = 37/218 (16%), Positives = 68/218 (31%), Gaps = 66/218 (30%) Query: 28 VLVIGELGVGKTSIIKRY----VHQLFSQHYRATIG--------VDFALKVLNWDSRTLV 75 + V+G + GKT I+ + V + IG ++ K++ R V Sbjct: 41 ICVLGHVDTGKTKILDKLRHTHVQDGEAGGITQQIGATNVPLEAINEQTKMIKNFDRENV 100 Query: 76 R---LQLWDIAGQERFGNMTRVYYKEA---VGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 R + + D G E F N+ + + A +V DI + + ++ Sbjct: 101 RIPGMLIIDTPGHESFSNLRN---RGSSLCDIAILVVDI--------MHGLEPQTIESIN 149 Query: 130 LPNGSPIPAVLLANKCD----------------QNKDSSQSPSQVD--------QFCKE- 164 L P ++ NK D K + + + +F ++ Sbjct: 150 LLKSKKCPFIVALNKIDRLYDWKKSPDSDVAATLKKQKKNTKDEFEERAKAIIVEFAQQG 209 Query: 165 HGFAGWFE------------TSAKDNINIEEAARFLVE 190 A ++E TSA + LVE Sbjct: 210 LNAALFYENKDPRTFVSLVPTSAHTGDGMGSLIYLLVE 247 >2QTH-A nrPDB Length = 364 Score = 44.5 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 61/188 (32%), Gaps = 28/188 (14%) Query: 30 VIGELGVGKTSIIKRYV--HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 ++G GKTS+ Q T+ + ++R ++ L D G R Sbjct: 184 IVGYTNSGKTSLFNSLTGLTQKVDTKLFTTM--SPKRYAIPINNR---KIMLVDTVGFIR 238 Query: 88 ----------FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 F ++ Y + +V D + S +++ + S P Sbjct: 239 GIPPQIVDAFFVTLSEAKY--SDALILVIDSTFSENL--LIETLQSSFEILREIGVSGKP 294 Query: 138 AVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGW--FETSAKDNINIEEAARFLVEKILV 194 ++ NK D N D + V++ KE + SA N+E L +KI Sbjct: 295 ILVTLNKIDKINGDLYKKLDLVEKLSKELYSPIFDVIPISALKRTNLE----LLRDKIYQ 350 Query: 195 NHQSFPNE 202 E Sbjct: 351 LATQLSLE 358 >6CES-C nrPDB Length = 399 Score = 44.1 bits (103), Expect = 5e-05, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 71/193 (36%), Gaps = 22/193 (11%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWDIAG 84 ++L++G GK SI K H++ T+ ++ K+ D + + V Q+WD G Sbjct: 63 RILLMGLRRSGKNSIQKVVFHKMSPNE---TLFLESTNKIYKDDISNSSFVNFQIWDFPG 119 Query: 85 QERFGNMTRVY---YKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 Q F + T Y ++ V D EA+ + + + + Sbjct: 120 QMDFFDPTFDYEMIFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEVFI- 177 Query: 142 ANKCD-QNKDSSQSPSQV------DQFCK---EHGFAGWFETSAKDNINIEEAARFLVEK 191 +K D + D + D E ++ TS D +I EA +V+K Sbjct: 178 -HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYD-HSIFEAFSKVVQK 235 Query: 192 ILVNHQSFPNEEN 204 ++ + N N Sbjct: 236 LIPQLPTLENLLN 248 >3T5D-A nrPDB Length = 274 Score = 42.9 bits (100), Expect = 1e-04, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 9/75 (12%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKR-YVHQLFSQHY-------RATIGVDFALKVLNW 69 P F ++V+GE G+GK+++I ++ L+S Y + T+ V+ KVL Sbjct: 1 GPLGSGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVE-QSKVLIK 59 Query: 70 DSRTLVRLQLWDIAG 84 + + L + D G Sbjct: 60 EGGVQLLLTIVDTPG 74 >4B44-A nrPDB Length = 363 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 19/201 (9%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V+++G + GKT+++ ++ I + T+V + D G E Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI---DTPGHEA 132 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 F + + K A A +V + + + + NK D Sbjct: 133 FTTIRQRGAKVADIAVIVIAADD--------GIMPQTEEAIAHAKAAGAKLIFAINKIDL 184 Query: 148 --NKDSSQSPSQVDQ--FCKEHGF-AGWFETSAKDNINIEEAARFLVEKI-LVNHQSFPN 201 +++ +E+G A SAK +++ ++ L ++++ PN Sbjct: 185 PQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPN 244 Query: 202 EENDVD--KIKLDQETLRAEN 220 E + KLD++ N Sbjct: 245 AEPRGVILESKLDKQAGIIAN 265 >4KJZ-A nrPDB Length = 473 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 19/201 (9%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V+++G + GKT+++ ++ I + T+V + D G E Sbjct: 75 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI---DTPGHEA 131 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 F + + K A A +V + + + + NK D Sbjct: 132 FTTIRQRGAKVADIAVIVIAADD--------GIMPQTEEAIAHAKAAGAKLIFAINKIDL 183 Query: 148 --NKDSSQSPSQVDQ--FCKEHGF-AGWFETSAKDNINIEEAARFLVEKI-LVNHQSFPN 201 +++ +E+G A SAK +++ ++ L ++++ PN Sbjct: 184 PQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPN 243 Query: 202 EENDVD--KIKLDQETLRAEN 220 E + KLD++ N Sbjct: 244 AEPRGVILESKLDKQAGIIAN 264 >2ODE-A nrPDB Length = 350 Score = 42.6 bits (99), Expect = 1e-04, Method: Composition-based stats. Identities = 19/183 (10%), Positives = 50/183 (27%), Gaps = 38/183 (20%) Query: 52 QHYRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV 105 +Y T +V + + +++D+ GQ ++ Sbjct: 164 SNYIPTQQDVLRTRVKTTGIVETHFTFKDLYFKMFDVGGQRSERKKWIHCFEGVTAIIFC 223 Query: 106 FDISR-------SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQ----- 153 +S + + DS + + +L NK D ++ + Sbjct: 224 VALSDYDLVLAEDEEMNRMHESMKLFDSICNNKWFTETSIILFLNKKDLFEEKIKRSPLT 283 Query: 154 ----------SPSQVDQF---------CKEHGFAGWFE-TSAKDNINIEEAARFLVEKIL 193 + + + ++ + T A D N++ + + I+ Sbjct: 284 ICYPEYTGSNTYEEAAAYIQCQFEDLNRRKDTKEIYTHFTCATDTKNVQFVFDAVTDVII 343 Query: 194 VNH 196 N+ Sbjct: 344 KNN 346 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 7/18 (38%), Positives = 14/18 (77%) Query: 27 KVLVIGELGVGKTSIIKR 44 K+L++G GK++I+K+ Sbjct: 34 KLLLLGAGESGKSTIVKQ 51 >3J4J-A nrPDB Length = 569 Score = 42.2 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 19/201 (9%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V+++G + GKT+++ ++ I + T+V + D G E Sbjct: 76 VVIMGHVDHGKTTLLDYLRKSRIAEKEAGGITQHVGAFEVKTPQGTVVFI---DTPGHEA 132 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ 147 F + + K A A +V + + + + NK D Sbjct: 133 FTTIRQRGAKVADIAVIVIAADD--------GIMPQTEEAIAHAKAAGAKLIFAINKIDL 184 Query: 148 --NKDSSQSPSQVDQ--FCKEHGF-AGWFETSAKDNINIEEAARFLVEKI-LVNHQSFPN 201 +++ +E+G A SAK +++ ++ L ++++ PN Sbjct: 185 PQADPEKVKRQLMERGFVPEEYGGDAIVIPISAKTGQGVQDLLEMILLLAELEDYRADPN 244 Query: 202 EENDVD--KIKLDQETLRAEN 220 E + KLD++ N Sbjct: 245 AEPRGVILESKLDKQAGIIAN 265 >4CSU-9 nrPDB Length = 390 Score = 41.8 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 38/98 (38%), Gaps = 4/98 (4%) Query: 115 EAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHG-FAGWFET 173 E S+L+ + + + P L+ NK D D ++ + + G ++ Sbjct: 257 ENARIIISELEK--YSQDLATKPRWLVFNKIDL-LDKVEAEEKAKAIAEALGWEDKYYLI 313 Query: 174 SAKDNINIEEAARFLVEKILVNHQSFPNEENDVDKIKL 211 SA + +++ ++ I+ N E +K++ Sbjct: 314 SAASGLGVKDLCWDVMTFIIENPVVQAEEAKQPEKVEF 351 >2QAG-C nrPDB Length = 418 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 9/71 (12%) Query: 22 REHLFKVLVIGELGVGKTSIIKR-YVHQLFSQHY-------RATIGVDFALKVLNWDSRT 73 R F ++V+GE G+GK+++I ++ L+S Y + T+ V+ KVL + Sbjct: 28 RGFEFTLMVVGESGLGKSTLINSLFLTDLYSPEYPGPSHRIKKTVQVE-QSKVLIKEGGV 86 Query: 74 LVRLQLWDIAG 84 + L + D G Sbjct: 87 QLLLTIVDTPG 97 >3FTQ-A nrPDB Length = 274 Score = 41.4 bits (96), Expect = 3e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 12/71 (16%) Query: 24 HLFKVLVIGELGVGKTSIIKR-YVHQLFSQHYRA--------TIGVDFALKVLNWDSRTL 74 F ++V+GE G+GK+++I ++ L+ + T+ ++ + + R + Sbjct: 4 FEFTLMVVGESGLGKSTLINSLFLTDLYPERIIPGAAEKIERTVQIE--ASTVEIEERGV 61 Query: 75 -VRLQLWDIAG 84 +RL + D G Sbjct: 62 KLRLTVVDTPG 72 >5J8B-z nrPDB Length = 679 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 38/125 (30%), Gaps = 13/125 (10%) Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 D V L D G F G +V D S+ E + K+ L+ Sbjct: 141 DGEEYV-FHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEH--- 196 Query: 130 LPNGSPIPAVLLANKCDQNKDS--SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARF 187 IP + NK D + + A + S K +EE Sbjct: 197 --GHVIIPVI---NKIDLPNARPLEVALEVEEVLGLPADEAIF--ASGKTGEGVEEILEA 249 Query: 188 LVEKI 192 +V++I Sbjct: 250 IVQRI 254 >5IMR-C nrPDB Length = 610 Score = 41.0 bits (95), Expect = 4e-04, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 38/125 (30%), Gaps = 13/125 (10%) Query: 70 DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVH 129 D V L D G F G +V D S+ E + K+ L+ Sbjct: 72 DGEEYV-FHLIDTPGHVDFTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEH--- 127 Query: 130 LPNGSPIPAVLLANKCDQNKDS--SQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARF 187 IP + NK D + + A + S K +EE Sbjct: 128 --GHVIIPVI---NKIDLPNARPLEVALEVEEVLGLPADEAIF--ASGKTGEGVEEILEA 180 Query: 188 LVEKI 192 +V++I Sbjct: 181 IVQRI 185 >2YWH-A nrPDB Length = 600 Score = 40.6 bits (94), Expect = 5e-04, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 29/175 (16%) Query: 37 GKTSIIKRY-------VHQLFSQHYRATI------GVDFALKVLNW-----DSRTLVRLQ 78 GK+++ R + + T+ G+ ++ + D T +L Sbjct: 18 GKSTLADRLLEYTGAISEREKREQLLDTLDVERERGITVKMQAVRMFYKAKDGNTY-KLH 76 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 L D G F GA ++ D S+ + V + ++ + Sbjct: 77 LIDTPGHVDFSYEVSRALAACEGALLLIDASQGIEAQTVANFWKAVE--------QDLVI 128 Query: 139 VLLANKCDQNK-DSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 + + NK D D + Q+++ SAK+ I IEE +V +I Sbjct: 129 IPVINKIDLPSADVDRVKKQIEEVLGLDPEEA-ILASAKEGIGIEEILEAIVNRI 182 >2QAG-A nrPDB Length = 361 Score = 40.6 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 12/71 (16%) Query: 24 HLFKVLVIGELGVGKTSIIKR-YVHQLFSQHYRA--------TIGVDFALKVLNWDSRTL 74 F ++V+GE G+GK+++I ++ L+ + T+ ++ + + R + Sbjct: 36 FEFTLMVVGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIE--ASTVEIEERGV 93 Query: 75 -VRLQLWDIAG 84 +RL + D G Sbjct: 94 KLRLTVVDTPG 104 >3IZY-P nrPDB Length = 537 Score = 40.6 bits (94), Expect = 6e-04, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 66/201 (32%), Gaps = 24/201 (11%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V ++G + GKT+++ + + I +++ S + D G Sbjct: 7 VTIMGHVDHGKTTLLDKLRKTQVAAMEAGGITQHIGAFLVSLPSGEKITF--LDTPGHAA 64 Query: 88 FGNMTRVYYKEAVGAFVVFDISR---SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANK 144 F M + +V T E++ + +P VL NK Sbjct: 65 FSAMRARGTQVTDIVILVVAADDGVMKQTVESIQ-----------HAKDAHVPIVLAINK 113 Query: 145 CDQNK-DSSQSPSQVDQF---CKEHGF-AGWFETSAKDNIN---IEEAARFLVEKILVNH 196 CD+ + D + ++ + C+++G SA N + EA L E + + Sbjct: 114 CDKAEADPEKVKKELLAYDVVCEDYGGDVQAVHVSALTGENMMALAEATIALAEMLELKA 173 Query: 197 QSFPNEENDVDKIKLDQETLR 217 E V + D+ Sbjct: 174 DPTGAVEGTVIESFTDKGRGP 194 >5IRR-A nrPDB Length = 308 Score = 40.2 bits (93), Expect = 8e-04, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 29/109 (26%) Query: 7 GDPGLGAAAAPAPET--REHLFKVLVIGELGVGKTSIIKRYVH------QLFSQHYRATI 58 G L P P ++ K++V+G+ G+GKT++IK + Q+ Y T Sbjct: 6 GKDALLGPRRPRPHKIWKKKYIKLIVVGDSGLGKTTLIKSLISIPGERLQVHDGSYTPT- 64 Query: 59 GVDFAL------KVLNW-DSRTLVRLQLW-----DIAG----QERFGNM 91 F ++W D V +W D G + F N+ Sbjct: 65 -EQFRRDPESLSSTVSWRDEEDRV---IWVYKIQDTPGYGDELDVFRNL 109 >1G7S-A nrPDB Length = 594 Score = 39.9 bits (92), Expect = 9e-04, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 25/118 (21%) Query: 81 DIAGQERFGNMTRVYYKE---AVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 D G E F + + + A A ++ DI+ +K +++ P Sbjct: 76 DTPGHEAFTTLRK---RGGALADLAILIVDIN--------EGFKPQTQEALNILRMYRTP 124 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195 V+ ANK D+ H + ET +K +I +++ V +++ Sbjct: 125 FVVAANKIDRIHGWRV-----------HEGRPFMETFSKQDIQVQQKLDTKVYELVGK 171 >3V00-C nrPDB Length = 356 Score = 39.9 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 19/185 (10%), Positives = 47/185 (25%), Gaps = 40/185 (21%) Query: 51 SQHYRATIGVDFALKVLNWDS-------RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAF 103 + Y T D + + +++D+ GQ ++ Sbjct: 166 TPGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTAII 224 Query: 104 VVFDISR-------SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSP- 155 +S + + +S + + +L NK D ++ + Sbjct: 225 FCVALSDYDLVLAEDEEMNRMHESMHLFNSICNNKWFTDTSIILFLNKKDLFEEKIKKSP 284 Query: 156 ----------SQVDQFCKEHGFAGWFE--------------TSAKDNINIEEAARFLVEK 191 S + + + E T A D N++ + + Sbjct: 285 LTICYPEYAGSNTYEEAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDI 344 Query: 192 ILVNH 196 I+ + Sbjct: 345 IIKEN 349 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 14/21 (66%) Query: 24 HLFKVLVIGELGVGKTSIIKR 44 K+L++G GK++I+K+ Sbjct: 34 RTVKLLLLGAGESGKSTIVKQ 54 >6D9H-A nrPDB Length = 355 Score = 39.5 bits (91), Expect = 0.001, Method: Composition-based stats. Identities = 18/184 (9%), Positives = 44/184 (23%), Gaps = 40/184 (21%) Query: 52 QHYRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV 105 Y T +V + + +++D+ Q ++ Sbjct: 166 SDYIPTQQDVLRTRVKTTGIVETHFTFKDLHFKMFDVGAQRSERKKWIHCFEGVTAIIFC 225 Query: 106 -----FDIS--RSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQ----- 153 +D+ + DS + + +L NK D ++ Sbjct: 226 VALSAYDLVLAEDEEMNRMHASMKLFDSICNNKWFTDTSIILFLNKKDLFEEKITHSPLT 285 Query: 154 ---------------------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 +++ F S D N++ + + I Sbjct: 286 ICFPEYTGANKYDEAASYIQSKFEDLNKRKDTKEIYTHFTCST-DTKNVQFVFDAVTDVI 344 Query: 193 LVNH 196 + N+ Sbjct: 345 IKNN 348 >1U0L-A nrPDB Length = 301 Score = 39.1 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 9/96 (9%) Query: 98 EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQ-NKDSSQSPS 156 +V + T + +D + L + + V++ NK D ++D + Sbjct: 84 NVDQVILVVTVKMPETSTYI------IDKFLVLAEKNELETVMVINKMDLYDEDDLRKVR 137 Query: 157 QVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKI 192 ++++ G +TSAK + IEE +L KI Sbjct: 138 ELEEI--YSGLYPIVKTSAKTGMGIEELKEYLKGKI 171 >1SHZ-A nrPDB Length = 340 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 16/156 (10%), Positives = 44/156 (28%), Gaps = 32/156 (20%) Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTF-------EAVLKWKSDLD 125 + +++D+ GQ ++ +S + + D Sbjct: 178 KDLHFKMFDVGGQRSERKKWFECFEGVTAIIFCVALSDYDQVLMEDRQTNRMHESMKLFD 237 Query: 126 SKVHLPNGSPIPAVLLANKCDQNKDSSQ---------------SPSQVDQF--------- 161 S + + +L NK D ++ + + + + Sbjct: 238 SICNNKWFTDTSIILFLNKKDLFEEKIKKSPLTICYPEYAGSNTYEEAAAYIQCQFEDLN 297 Query: 162 CKEHGFAGWFE-TSAKDNINIEEAARFLVEKILVNH 196 ++ + T A D N++ + + I+ N+ Sbjct: 298 KRKDTKEIYTHFTCATDTKNVQFVFDAVTDVIIKNN 333 Score = 32.2 bits (72), Expect = 0.20, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 8/67 (11%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRY-------VHQLFSQHYRATIGVDFALKV-LNWD 70 E K+L++G GK++ +K+ Q + +R TI + + + D Sbjct: 6 GEKAAREVKLLLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVD 65 Query: 71 SRTLVRL 77 +R + + Sbjct: 66 AREKLHI 72 >5DN8-A nrPDB Length = 446 Score = 38.7 bits (89), Expect = 0.002, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 57/182 (31%), Gaps = 31/182 (17%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRA--TIGVDFALKVLNWDSRTLVRLQLWDIA 83 K+ +IG VGK+++I R + + Y T + D L D A Sbjct: 179 IKIAMIGRPNVGKSTLINRLLGEERVIVYDQPGTTRDSIYIPFARNDE----NYTLIDTA 234 Query: 84 G-------Q---ERFGNMTRV-YYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPN 132 G Q E+F + + A + D + T + DL + Sbjct: 235 GIRRRAKIQDYVEKFSMIKSLQAMHAADVVIFLLDARQGVT-------EQDLRLLNRIVE 287 Query: 133 GSPIPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGW---FETSAKDNINIEEAARFL 188 + + NK D N + + + F + + SA + + R + Sbjct: 288 AGVSLIIAV-NKWDGLNIEERDNVRNAID--RRMPFVDFARRYFISALHGTGVGKLFRAI 344 Query: 189 VE 190 E Sbjct: 345 QE 346 >6OIK-A nrPDB Length = 354 Score = 38.3 bits (88), Expect = 0.002, Method: Composition-based stats. Identities = 23/181 (12%), Positives = 49/181 (27%), Gaps = 37/181 (20%) Query: 53 HYRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVF 106 Y+ T +V + + +L+D+ GQ +++ Sbjct: 167 DYQPTEQDILRTRVKTTGIVETHFTFKNLHFRLFDVGGQRSERKKWIHCFEDVTAIIFCV 226 Query: 107 DIS-------RSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSP---- 155 +S T + + DS + +L NK D + + Sbjct: 227 ALSGYDQVLHEDETTNRMHESLMLFDSICNNKFFIDTSIILFLNKKDLFGEKIKKSPLTI 286 Query: 156 -------------------SQVDQFCKEHGFAGWFE-TSAKDNINIEEAARFLVEKILVN 195 +Q + + + T A D NI+ + + I+ N Sbjct: 287 CFPEYTGPNTYEDAAAYIQAQFESKNRSPNKEIYCHMTCATDTNNIQVVFDAVTDIIIAN 346 Query: 196 H 196 + Sbjct: 347 N 347 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 29/71 (40%), Gaps = 25/71 (35%) Query: 27 KVLVIGELGVGKTSIIKRYV---HQLFS----QHYRA------------------TIGVD 61 K+L++G GK++I+K+ FS + Y+ T+G++ Sbjct: 35 KLLLLGAGESGKSTIVKQMKIIHEDGFSGEDVKQYKPVVYSNTIQSLAAIVRAMDTLGIE 94 Query: 62 FALKVLNWDSR 72 + K D++ Sbjct: 95 YGDKERKADAK 105 >5KH0-A nrPDB Length = 396 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 37/194 (19%), Positives = 68/194 (35%), Gaps = 31/194 (15%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLV-RLQLWDIAGQE 86 + + G VGK+S + + Q S + + V + V + L D G + Sbjct: 11 IAITGRRNVGKSSFMNALIGQEVS--IVSNVAGTTTDPVFKSMELSPVGPITLIDTPGLD 68 Query: 87 RFGNM--------TRVYYKEAVGAFVVFDISRSSTF-EAVLKWKSDLDSKVHLPNGSPIP 137 G + + Y+ G +V DI F E ++K +L+ IP Sbjct: 69 DVGELGIKRIKKAKKSLYRADCGILIVDDI--PGNFEEQIIKLFKELE----------IP 116 Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVNHQ 197 + NK D + +++ K++ + SA I E+ + + IL Sbjct: 117 YFIAINKID-----TIDHENIEKEYKKYNVPI-LKVSALKKIGFEKIGKTI-NSILPKDD 169 Query: 198 SFPNEENDVDKIKL 211 P + +D L Sbjct: 170 EIPYLSDLIDGGDL 183 >5M04-A nrPDB Length = 360 Score = 38.3 bits (88), Expect = 0.003, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 4/83 (4%) Query: 115 EAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHG-FAGWFET 173 E S+L+ + + + P L+ NK D D ++ + + G ++ Sbjct: 277 ENARIIISELEK--YSQDLATKPRWLVFNKIDLL-DKVEAEEKAKAIAEALGWEDKYYLI 333 Query: 174 SAKDNINIEEAARFLVEKILVNH 196 SA + +++ ++ I+ N Sbjct: 334 SAASGLGVKDLCWDVMTFIIENP 356 >3A1W-A nrPDB Length = 168 Score = 37.9 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 57/175 (32%), Gaps = 23/175 (13%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 H+ KV + G VGKTS+ + V+ V + + L D+ Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG---YTINLIDLP 60 Query: 84 GQER--FGNMTRVYYK------EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 G + ++ + +A +V D +++ L+ + Sbjct: 61 GTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPE--QSLYLLLEILEMEKK------ 112 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 +L D+ K + + + K G F TS+ +EE +VE Sbjct: 113 --VILAMTAIDEAKKTGMKIDRYE-LQKHLGIPVVF-TSSVTGEGLEELKEKIVE 163 >3A1U-A nrPDB Length = 258 Score = 37.6 bits (86), Expect = 0.004, Method: Composition-based stats. Identities = 30/175 (17%), Positives = 57/175 (32%), Gaps = 23/175 (13%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 83 H+ KV + G VGKTS+ + V+ V + + L D+ Sbjct: 4 HMVKVALAGCPNVGKTSLFNALTGTKQYVANWPGVTVEKKEGVFTYKG---YTINLIDLP 60 Query: 84 GQER--FGNMTRVYYK------EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 G + ++ + +A +V D +++ L+ + Sbjct: 61 GTYSLGYSSIDEKIARDYLLKGDADLVILVADSVNPE--QSLYLLLEILEMEKK------ 112 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVE 190 +L D+ K + + + K G F TS+ +EE +VE Sbjct: 113 --VILAMTAIDEAKKTGMKIDRYE-LQKHLGIPVVF-TSSVTGEGLEELKEKIVE 163 >4WQY-BZ nrPDB Length = 758 Score = 37.6 bits (86), Expect = 0.005, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R+ + D G F + GA VVFD S+ ++ W+ Sbjct: 145 RINIIDTPGHVDFTIEVERSMRVLDGAIVVFDSSQGVEPQSETVWRQ--------AEKYK 196 Query: 136 IPAVLLANKCD 146 +P + ANK D Sbjct: 197 VPRIAFANKMD 207 >1ZCB-A nrPDB Length = 362 Score = 36.8 bits (84), Expect = 0.007, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 53/181 (29%), Gaps = 46/181 (25%) Query: 56 ATIGV---DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDIS--- 109 T G+ DF +K V ++ D+ GQ + + S Sbjct: 187 PTKGIHEYDFEIK--------NVPFKMVDVGGQRSERKRWFECFDSVTSILFLVSSSEFD 238 Query: 110 -----RSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKE 164 T + + + ++ V+ S + +L NK D ++ Q S D F + Sbjct: 239 QVLMEDRQT-NRLTESLNIFETIVNNRVFSNVSIILFLNKTDLLEEKVQVVSIKDYFLEF 297 Query: 165 HGFAGWFE--------------------------TSAKDNINIEEAARFLVEKILVNHQS 198 G T+A + NI R + + IL ++ Sbjct: 298 EGDPHCLRDVQKFLVECFRGKRRDQQQRPLYHHFTTAINTENIRLVFRDVKDTILHDNLK 357 Query: 199 F 199 Sbjct: 358 Q 358 Score = 34.9 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRY-------VHQLFSQHYRATIGVDFALKV-LNWD 70 E L K+L++G GK++ +K+ Q + +R TI + + + D Sbjct: 27 GERSARLVKILLLGAGESGKSTFLKQMRIIHGQDFDQRAREEFRPTIYSNVIKGMRVLVD 86 Query: 71 SRTLVRL 77 +R + + Sbjct: 87 AREKLHI 93 >4DCU-A nrPDB Length = 456 Score = 36.8 bits (84), Expect = 0.008, Method: Composition-based stats. Identities = 23/160 (14%), Positives = 55/160 (34%), Gaps = 21/160 (13%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 P + E + + +IG VGK+S++ + + + + + V + Sbjct: 187 PETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEE--RVIVSNVAGTTRDAVDTSFTYNQQE 244 Query: 77 LQLWDIAG----------QERFGNMTRV-YYKEAVGAFVVFDISRSSTFEAVLKWKSDLD 125 + D AG E++ + + + VV D E +++ + Sbjct: 245 FVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGE-----EGIIEQDKRIA 299 Query: 126 SKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 H + V++ NK D + + ++ ++H Sbjct: 300 GYAHEAGKA---VVIVVNKWDAVDKDESTMKEFEENIRDH 336 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA---- 83 V ++G VGK++I R + S T GV ++ + L D Sbjct: 26 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVT-RDRIYSSAEWLNYDFNLIDTGGIDI 83 Query: 84 GQERF----GNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 G E F + EA + + E V ++ ++ P V Sbjct: 84 GDEPFLAQIRQQAEIAMDEADVIIFMV-----NGREGVTAADEEVAKILYRTKK---PVV 135 Query: 140 LLANKCDQNKDS 151 L NK D + Sbjct: 136 LAVNKLDNTEMR 147 >1TAG-A nrPDB Length = 324 Score = 36.8 bits (84), Expect = 0.009, Method: Composition-based stats. Identities = 21/185 (11%), Positives = 48/185 (25%), Gaps = 40/185 (21%) Query: 51 SQHYRATIGVDFALKVLNWDS-------RTLVRLQLWDIAGQERFGNMTRVYYKEAVGAF 103 + Y T D + + +++D+ GQ ++ Sbjct: 134 TPGYVPT-EQDVLRSRVKTTGIIETQFSFKDLNFRMFDVGGQRSERKKWIHCFEGVTCII 192 Query: 104 VV-----FD--ISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPS 156 + +D + + + +S + + VL NK D + + Sbjct: 193 FIAALSAYDMVLVEDDEVNRMHESLHLFNSICNHRYFATTSIVLFLNKKDVFSEKIKKAH 252 Query: 157 QVDQFCKEHG-----------FAGWFE--------------TSAKDNINIEEAARFLVEK 191 F +G + E T A D N++ + + Sbjct: 253 LSICFPDYNGPNTYEDAGNYIKVQFLELNMRRDVKEIYSHMTCATDTQNVKFVFDAVTDI 312 Query: 192 ILVNH 196 I+ + Sbjct: 313 IIKEN 317 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 14/21 (66%) Query: 24 HLFKVLVIGELGVGKTSIIKR 44 K+L++G GK++I+K+ Sbjct: 2 RTVKLLLLGAGESGKSTIVKQ 22 >6O81-S nrPDB Length = 472 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHG----FAGWFETSAKDNINIEEAARFLVEKIL 193 ++L NK D K+S G A SA+ NIE ++V+KI Sbjct: 185 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIP 244 Query: 194 VNHQSFPNE 202 V + F +E Sbjct: 245 VPPRDFTSE 253 >6FEC-S nrPDB Length = 422 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 4/69 (5%) Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHG----FAGWFETSAKDNINIEEAARFLVEKIL 193 ++L NK D K+S G A SA+ NIE ++V+KI Sbjct: 147 ILILQNKIDLVKESQAKEQYEQILAFVQGTVAEGAPIIPISAQLKYNIEVVCEYIVKKIP 206 Query: 194 VNHQSFPNE 202 V + F +E Sbjct: 207 VPPRDFTSE 215 >1ZO1-I nrPDB Length = 501 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 32/186 (17%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 V ++G + GKTS+++ + I + ++ ++ D G Sbjct: 7 VTIMGHVDHGKTSLLEYIRSTKVASGEAGGITQHIGAYHVETEN-GMITF--LDTPGHAA 63 Query: 88 FGNMTRVYYKEAVG---AFVVFDISR---SSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141 F +M + A +V T EA+ K+ V Sbjct: 64 FTSMRA---RGAQATDIVVLVVAADDGVMPQTIEAIQHAKAAQVPVVVAV---------- 110 Query: 142 ANKCDQ---NKDSSQSP-SQVDQFCKEHGFA-GWFETSAKDNINIEEAARFLVEKILVNH 196 NK D+ + D ++ SQ +E G + SAK I+E L++ IL+ Sbjct: 111 -NKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAKAGTGIDE----LLDAILLQA 165 Query: 197 QSFPNE 202 + + Sbjct: 166 EVLELK 171 >3JCN-b nrPDB Length = 890 Score = 36.4 bits (83), Expect = 0.010, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 67/206 (32%), Gaps = 38/206 (18%) Query: 8 DPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVL 67 D GAAA P V ++G + GKTS++ + I + Sbjct: 380 DRDTGAAAEPRAPV------VTIMGHVDHGKTSLLDYIRSTKVASGEAGGITQHIGAYHV 433 Query: 68 NWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVG---AFVVFDISR---SSTFEAVLKWK 121 ++ + D G F +M + A +V T EA+ K Sbjct: 434 ETENGM---ITFLDTPGHAAFTSMRA---RGAQATDIVVLVVAADDGVMPQTIEAIQHAK 487 Query: 122 SDLDSKVHLPNGSPIPAVLLANKCDQ---NKDSSQSP-SQVDQFCKEHGFA-GWFETSAK 176 + V NK D+ + D ++ SQ +E G + SAK Sbjct: 488 AAQVPVVVAV-----------NKIDKPEADPDRVKNELSQYGILPEEWGGESQFVHVSAK 536 Query: 177 DNINIEEAARFLVEKILVNHQSFPNE 202 I+E L++ IL+ + + Sbjct: 537 AGTGIDE----LLDAILLQAEVLELK 558 >5VAI-A nrPDB Length = 380 Score = 36.0 bits (82), Expect = 0.013, Method: Composition-based stats. Identities = 12/87 (13%), Positives = 24/87 (27%), Gaps = 7/87 (8%) Query: 73 TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTF-------EAVLKWKSDLD 125 V ++D+ GQ + + V S + + + + Sbjct: 201 DKVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFK 260 Query: 126 SKVHLPNGSPIPAVLLANKCDQNKDSS 152 S + I +L NK D + Sbjct: 261 SIWNNRWLRTISVILFLNKQDLLAEKV 287 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 15/26 (57%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKR 44 + ++L++G GK++I+K+ Sbjct: 34 KQVYRATHRLLLLGAGESGKSTIVKQ 59 >5X4B-A nrPDB Length = 162 Score = 35.6 bits (81), Expect = 0.017, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 42/132 (31%), Gaps = 18/132 (13%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA---- 83 V ++G VGK++I R + S T GV ++ + L D Sbjct: 5 VAIVGRPNVGKSTIFNRIAGERISIVED-TPGVT-RDRIYSSAEWLNYDFNLIDTGGIDI 62 Query: 84 GQERF----GNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 139 G E F + EA + + E V ++ ++ P V Sbjct: 63 GDEPFLAQIRQQAEIAMDEADVIIFMV-----NGREGVTAADEEVAKILYRTKK---PVV 114 Query: 140 LLANKCDQNKDS 151 L NK D + Sbjct: 115 LAVNKLDNTEMR 126 >1HEY-A nrPDB Length = 128 Score = 35.6 bits (81), Expect = 0.018, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 36/100 (36%), Gaps = 12/100 (12%) Query: 23 EHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD- 81 + K LV+G G GK+++ F+ A GVD K L V + D Sbjct: 2 DKELKFLVVGNGGTGKSTVRNLLKELGFNNVEDAEDGVDALNK-LQAGGYGFV---ISDW 57 Query: 82 ----IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV 117 + G E + A+ A V ++ + E + Sbjct: 58 NMPNMDGLELLKTIRA---DGAMSALPVLMVTAEAKKENI 94 >4QJ3-A nrPDB Length = 379 Score = 35.2 bits (80), Expect = 0.020, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 38/182 (20%) Query: 51 SQHYRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFV 104 Y T ++V V ++ D+ GQ ++ Sbjct: 189 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 248 Query: 105 V-----FD--ISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQ---- 153 + +D + S + + K+ + + P +L NK D ++ Sbjct: 249 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 308 Query: 154 --------SPSQVDQFCKEHGFAGWFE-------------TSAKDNINIEEAARFLVEKI 192 P + Q +E + + T A D NI + + I Sbjct: 309 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 368 Query: 193 LV 194 L Sbjct: 369 LQ 370 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 7/21 (33%), Positives = 13/21 (61%) Query: 24 HLFKVLVIGELGVGKTSIIKR 44 K+L++G GK++ IK+ Sbjct: 58 RELKLLLLGTGESGKSTFIKQ 78 >3EC1-A nrPDB Length = 369 Score = 35.2 bits (80), Expect = 0.021, Method: Composition-based stats. Identities = 12/63 (19%), Positives = 22/63 (34%), Gaps = 5/63 (7%) Query: 133 GSPIPAVLLANKCDQNKDSSQSPSQ---VDQFCKEHGFAG--WFETSAKDNINIEEAARF 187 + P +L+ NK D S + P + + +E G SA I + + Sbjct: 96 AADNPILLVGNKADLLPRSVKYPKLLRWMRRMAEELGLCPVDVCLVSAAKGIGMAKVMEA 155 Query: 188 LVE 190 + Sbjct: 156 INR 158 >2BCJ-Q nrPDB Length = 353 Score = 35.2 bits (80), Expect = 0.021, Method: Composition-based stats. Identities = 25/182 (13%), Positives = 49/182 (26%), Gaps = 38/182 (20%) Query: 51 SQHYRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFV 104 Y T ++V V ++ D+ GQ ++ Sbjct: 163 DPSYLPTQQDVLRVRVPTTGIIEYPFDLQSVIFRMVDVGGQRSERRKWIHCFENVTSIMF 222 Query: 105 V-----FD--ISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQ---- 153 + +D + S + + K+ + + P +L NK D ++ Sbjct: 223 LVALSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEEKIMYSHL 282 Query: 154 --------SPSQVDQFCKEHGFAGWFE-------------TSAKDNINIEEAARFLVEKI 192 P + Q +E + + T A D NI + + I Sbjct: 283 VDYFPEYDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTI 342 Query: 193 LV 194 L Sbjct: 343 LQ 344 Score = 30.2 bits (67), Expect = 0.63, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKR 44 E K+L++G GK++ IK+ Sbjct: 27 GERSRRELKLLLLGTGESGKSTFIKQ 52 >4KV9-A nrPDB Length = 412 Score = 35.2 bits (80), Expect = 0.023, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLF---SQHYRATIGVDFALKVLNWD-SRTLVRLQL 79 +F +L +GE G+GK+++++ +Q F + T D LK + +D V+L+L Sbjct: 40 FVFNILCVGETGIGKSTLLETLFNQKFDFSPSTHDLT---DPKLKAVTYDLKEANVKLKL 96 >1ZCA-A nrPDB Length = 359 Score = 34.9 bits (79), Expect = 0.026, Method: Composition-based stats. Identities = 28/190 (14%), Positives = 51/190 (26%), Gaps = 49/190 (25%) Query: 48 QLFSQHYR------ATIGV---DFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKE 98 F AT G+ DF +K + ++ D+ GQ + Sbjct: 171 NYFPSKQDILLARKATKGIVEHDFVIKKIP--------FKMVDVGGQRSQRQKWFQCFDG 222 Query: 99 AVGAFVVFDISRSSTF-------EAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDS 151 + S +++ + ++ V+ + +L NK D + Sbjct: 223 ITSILFMVSSSEYDQVLMEDRRTNRLVESMNIFETIVNNKLFFNVSIILFLNKMDLLVEK 282 Query: 152 SQSPSQVDQFCKEHGFAGWFE-------------------------TSAKDNINIEEAAR 186 +S S F G E T+A D NI Sbjct: 283 VKSVSIKKHFPDFKGDPHRLEDVQRYLVQCFDRKRRNRSKPLFHHFTTAIDTENIRFVFH 342 Query: 187 FLVEKILVNH 196 + + IL + Sbjct: 343 AVKDTILQEN 352 Score = 31.8 bits (71), Expect = 0.26, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 7/49 (14%) Query: 20 ETREHLFKVLVIGELGVGKTSII--KRYVHQ-LFSQ----HYRATIGVD 61 L K+L++G GK++ + R +H F Q +R TI + Sbjct: 30 RAVRRLVKILLLGAGESGKSTFLKQMRIIHGREFDQKALLEFRDTIFDN 78 >1ZUN-B nrPDB Length = 434 Score = 34.9 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 66/202 (32%), Gaps = 49/202 (24%) Query: 20 ETREHLFKVLVIGELGVGKTSIIKRYVHQL---FSQHYRA---------TIGVDF----- 62 R+ + + L G + GK+++I R +H + H A T G D Sbjct: 19 HERKEMLRFLTCGNVDDGKSTLIGRLLHDSKMIYEDHLEAITRDSKKSGTTGDDVDLALL 78 Query: 63 -------ALKVLNWD------SRTLVRLQLWDIAGQERF-GNMTRVYYKEAVGAFVVFDI 108 + + D S + + D G E++ NM + +V Sbjct: 79 VDGLQAEREQGITIDVAYRYFSTAKRKFIIADTPGHEQYTRNMATGASTCDLAIILV--- 135 Query: 109 SRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLA-NKCDQN--KDSSQSPSQVD--QFCK 163 +A ++ ++ + I +++A NK D N + + D +F + Sbjct: 136 ------DARYGVQTQTRRHSYIASLLGIKHIVVAINKMDLNGFDERVFESIKADYLKFAE 189 Query: 164 ----EHGFAGWFETSAKDNINI 181 + + SA N+ Sbjct: 190 GIAFKPTTMAFVPMSALKGDNV 211 >5H7K-A nrPDB Length = 397 Score = 34.9 bits (79), Expect = 0.030, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 28/143 (19%) Query: 37 GKTSIIKRYVHQL---------------FSQHYRA---TIGVDFALKVLNWDSRTLVRLQ 78 GKT++ + F + +A TI V N++ + + + Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYL-IN 94 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 L D G FG + G +V D AV ++ V + Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVD--------AVEGVMPQTETVVRQALREYVKP 146 Query: 139 VLLANKCD-QNKDSSQSPSQVDQ 160 VL NK D ++ +P Q+ + Sbjct: 147 VLFINKVDRLIRELKLTPQQMME 169 >5H7J-A nrPDB Length = 743 Score = 34.9 bits (79), Expect = 0.030, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 47/143 (32%), Gaps = 28/143 (19%) Query: 37 GKTSIIKRYVHQL---------------FSQHYRA---TIGVDFALKVLNWDSRTLVRLQ 78 GKT++ + F + +A TI V N++ + + + Sbjct: 36 GKTTLSDNLLAGAGMISEELAGKQLVLDFDEQEQARGITINAANVSMVHNYEGKDYL-IN 94 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 L D G FG + G +V D AV ++ V + Sbjct: 95 LIDTPGHVDFGGDVTRAMRAIDGVIIVVD--------AVEGVMPQTETVVRQALREYVKP 146 Query: 139 VLLANKCD-QNKDSSQSPSQVDQ 160 VL NK D ++ +P Q+ + Sbjct: 147 VLFINKVDRLIRELKLTPQQMME 169 >4FID-A nrPDB Length = 340 Score = 34.5 bits (78), Expect = 0.042, Method: Composition-based stats. Identities = 15/116 (12%), Positives = 32/116 (27%), Gaps = 19/116 (16%) Query: 52 QHYRATIGVDFALKVLNWDSR------TLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV 105 + Y T + + L D+ GQ ++ + A V Sbjct: 132 EDYVPTEEDLIHNRTKTTGIHEYDFVVKDIPFHLIDVGGQRSERKKWVSFFSDVDCAIFV 191 Query: 106 -----FDIS-----RSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDS 151 +D+ +S + D+ + L + + NK D ++ Sbjct: 192 TSLAEYDMKLYEDGNTSRLTESIAVFKDIMTNEFLKGAVKLIFL---NKMDLFEEK 244 Score = 29.8 bits (66), Expect = 0.98, Method: Composition-based stats. Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 3/33 (9%) Query: 28 VLVIGELGVGKTSIIKR---YVHQLFSQHYRAT 57 V+++G GK++I K+ F + RAT Sbjct: 8 VMLLGSGESGKSTIAKQLKILFGGGFPEQERAT 40 >5NON-A nrPDB Length = 165 Score = 34.1 bits (77), Expect = 0.046, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 9/50 (18%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 K+ +IG+ GVG T + +V F Y K + D+ ++ Sbjct: 51 KLEIIGDGGVG-TILDMTFVPGEFPHEY--------KEKFILVDNEHRLK 91 >2VNE-A nrPDB Length = 201 Score = 34.1 bits (77), Expect = 0.046, Method: Composition-based stats. Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 9/50 (18%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 K+ +IG+ GVG T + +V F Y K + D+ ++ Sbjct: 67 KLEIIGDGGVG-TILDMTFVPGEFPHEY--------KEKFILVDNEHRLK 107 >2P8Y-T nrPDB Length = 842 Score = 34.1 bits (77), Expect = 0.048, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 48/143 (33%), Gaps = 20/143 (13%) Query: 60 VDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLK 119 D D + + + L D G F + + GA VV D T E V Sbjct: 84 EDVKEIKQKTDGNSFL-INLIDSPGHVDFSSEVTAALRVTDGALVVVD-----TIEGVCV 137 Query: 120 WKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI 179 ++ + G I V++ NK D+ Q + ++T A+ Sbjct: 138 ---QTETVLRQALGERIKPVVVINKVDRALLELQVSKE-----------DLYQTFARTVE 183 Query: 180 NIEEAARFLVEKILVNHQSFPNE 202 ++ +++L + Q +P Sbjct: 184 SVNVIVSTYADEVLGDVQVYPAR 206 >2XTZ-A nrPDB Length = 354 Score = 34.1 bits (77), Expect = 0.050, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 25/122 (20%) Query: 53 HYRATIGVDFALKVLNWDSRTLVRLQ---------------LWDIAGQERFGNMTRVYYK 97 +Y T +V + +V +Q L+D+ GQ ++ Sbjct: 149 NYIPTKEDVLYARV---RTTGVVEIQFSPVGENKKSGEVYRLFDVGGQRNERRKWIHLFE 205 Query: 98 EAVGAFVVFDIS--RSSTFEA-----VLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKD 150 IS + FE +++ K D + P +L NK D + Sbjct: 206 GVTAVIFCAAISEYDQTLFEDEQKNRMMETKELFDWVLKQPCFEKTSFMLFLNKFDIFEK 265 Query: 151 SS 152 Sbjct: 266 KV 267 Score = 30.6 bits (68), Expect = 0.62, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 8/75 (10%) Query: 17 PAPETREHLFKVLVIGELGVGKTSIIKR---YVHQLFSQ----HYRATIGVD-FALKVLN 68 A + H+ K+L++G GK++I K+ F + Y I + + L Sbjct: 1 GAMGSGIHIRKLLLLGAGESGKSTIFKQIKLLFQTGFDEGELKSYVPVIHANVYQTIKLL 60 Query: 69 WDSRTLVRLQLWDIA 83 D D A Sbjct: 61 HDGTKEFAQNETDSA 75 >5TY0-A nrPDB Length = 422 Score = 34.1 bits (77), Expect = 0.055, Method: Composition-based stats. Identities = 29/150 (19%), Positives = 52/150 (34%), Gaps = 18/150 (12%) Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R+ + D G F + GA VVFD +V + ++ N Sbjct: 84 RINIIDTPGHVDFMIEVERSLRVLDGAVVVFD--------SVAGVEPQSETVWRQANKYG 135 Query: 136 IPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKILV 194 +P ++ NK D + + SQ+ Q A EE + +++ I + Sbjct: 136 VPRIVFVNKMDRMGANFLRVVSQIKQRLGSTPVVLQLPIGA------EEEFKGVIDLIKM 189 Query: 195 NHQSFPNEENDVDKIKLDQETLRAENKSQC 224 + E + +D + A+ KS C Sbjct: 190 KAIHWDEENKGMTFKYVD---IPADLKSTC 216 >1PUJ-A nrPDB Length = 282 Score = 34.1 bits (77), Expect = 0.055, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 7/68 (10%) Query: 18 APETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYR-ATIGVDFALKVLNWDSRTLVR 76 A + + L+IG VGK+++I R + ++ G+ + + + Sbjct: 113 AKGVKPRAIRALIIGIPNVGKSTLINRLAKKNIAKTGDRP--GITTSQQWVKVGKE---- 166 Query: 77 LQLWDIAG 84 L+L D G Sbjct: 167 LELLDTPG 174 >6OIJ-A nrPDB Length = 353 Score = 34.1 bits (77), Expect = 0.056, Method: Composition-based stats. Identities = 25/179 (13%), Positives = 49/179 (27%), Gaps = 38/179 (21%) Query: 54 YRATIGVDFALKVLNWD------SRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVV-- 105 Y T ++V + ++ D+ GQ ++ + Sbjct: 166 YLPTQQDVLRVRVPTTGIIEYPFDLENIIFRMVDVGGQRSERRKWIHCFENVTSIMFLVA 225 Query: 106 ---FD--ISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQ------- 153 +D + S + + K+ + + P +L NK D +D Sbjct: 226 LSEYDQVLVESDNENRMEESKALFRTIITYPWFQNSSVILFLNKKDLLEDKILYSHLVDY 285 Query: 154 -----SPSQVDQFCKEHGFAGWFE-------------TSAKDNINIEEAARFLVEKILV 194 P + Q +E + + T A D NI + + IL Sbjct: 286 FPEFDGPQRDAQAAREFILKMFVDLNPDSDKIIYSHFTCATDTENIRFVFAAVKDTILQ 344 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 14/26 (53%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKR 44 E K+L++G GK++ IK+ Sbjct: 27 GEKARRELKLLLLGTGESGKSTFIKQ 52 >5CYO-A nrPDB Length = 274 Score = 33.7 bits (76), Expect = 0.060, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 10/70 (14%) Query: 24 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRA---------TIGVDFALKVLNWDSRTL 74 F ++V+G+ G+GK+++I S+ TI + + Sbjct: 3 FEFNIMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKG-VR 61 Query: 75 VRLQLWDIAG 84 ++L + D G Sbjct: 62 MKLTVIDTPG 71 >6F1T-i nrPDB Length = 492 Score = 33.7 bits (76), Expect = 0.072, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 136 IPAVLLANKCD----QNKDSSQSPSQV-------DQFCKEHGFAGWFETSAKDNINIEEA 184 IP +++ KCD K+ + +FC ++G A + TS K+ N++ Sbjct: 225 IPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIY-TSVKEEKNLDLL 283 Query: 185 ARFLVEKILVNHQSFP 200 +++V K H + P Sbjct: 284 YKYIVHKTYGFHFTTP 299 >6F1Y-j nrPDB Length = 337 Score = 33.7 bits (76), Expect = 0.073, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 12/76 (15%) Query: 136 IPAVLLANKCD----QNKDSSQSPSQV-------DQFCKEHGFAGWFETSAKDNINIEEA 184 IP +++ KCD K+ + +FC ++G A + TS K+ N++ Sbjct: 189 IPVLVVCTKCDAVSVLEKEHDYRDEHLDFIQSHLRRFCLQYGAALIY-TSVKEEKNLDLL 247 Query: 185 ARFLVEKILVNHQSFP 200 +++V K H + P Sbjct: 248 YKYIVHKTYGFHFTTP 263 >5AR1-A nrPDB Length = 303 Score = 33.7 bits (76), Expect = 0.073, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 27/72 (37%), Gaps = 13/72 (18%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATI--------GVD--FALKVLNWDSRTL 74 F V+++G+ G G+++ I TI +D + + + Sbjct: 27 TFTVMIVGQSGSGRSTFINTLC-GQQVVDTSTTILLPTDTSTEIDLQLREETVELEDDEG 85 Query: 75 VRLQ--LWDIAG 84 V++Q + D G Sbjct: 86 VKIQLNIIDTPG 97 >3R7W-B nrPDB Length = 331 Score = 32.9 bits (74), Expect = 0.10, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 68/180 (37%), Gaps = 22/180 (12%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 VL++G GK+SI K H + T+ ++ TL+ L + ++ GQ Sbjct: 2 VLLMGVRRCGKSSICKVVFHNMQPLD---TLYLESTSNPSLEHFSTLIDLAVMELPGQLN 58 Query: 88 FGNMTRVYYKEAVGA----FVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLAN 143 + Y +V+ I + + + + + N S VL+ + Sbjct: 59 Y---FEPSYDSERLFKSVGALVYVIDSQDEYINAITNLAMIIEYAYKVNPSINIEVLI-H 114 Query: 144 KCD-QNKDSSQ---------SPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 K D ++D + ++ + + ++ TS D +I EA +V+K++ Sbjct: 115 KVDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFD-HSIYEAFSRIVQKLI 173 >4Z54-A nrPDB Length = 287 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 10/68 (14%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFS---------QHYRATIGVDFALKVLNWDSRTLVR 76 F ++V+G+ G+GK++++ S + T+ + V+ + ++ Sbjct: 20 FNIMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEIKAIGHVIE-EGGVKMK 78 Query: 77 LQLWDIAG 84 L + D G Sbjct: 79 LTVIDTPG 86 >5OCH-A nrPDB Length = 612 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 17/54 (31%) Query: 28 VLVIGELGVGKT---SIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 V ++G+ G GKT S+++R+ Y T G V+ D R L L Sbjct: 394 VALVGQSGGGKTTVASLLERF--------YDPTAG------VVMLDGRDLRTLD 433 >1UDX-A nrPDB Length = 416 Score = 32.9 bits (74), Expect = 0.11, Method: Composition-based stats. Identities = 29/178 (16%), Positives = 52/178 (29%), Gaps = 32/178 (17%) Query: 30 VIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA------ 83 ++G GK+S++ + + + R L DI Sbjct: 162 LVGYPNAGKSSLLAAMTRAH--PKIAPYPFTTLSPNLGVVEVSEEERFTLADIPGIIEGA 219 Query: 84 ------GQERFGNMTRVYYKEAVGAFVVFDISRS--STFEAVLKWKSDLDSKVHLPNGSP 135 G E ++ R V D + T E + K + + P Sbjct: 220 SEGKGLGLEFLRHIAR-----TRVLLYVLDAADEPLKTLETLRK-----EVGAYDPALLR 269 Query: 136 IPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNIN---IEEAARFLVE 190 P+++ NK D ++ + D +E SA ++EA LV Sbjct: 270 RPSLVALNKVDLLEEEAVKAL-ADALARE--GLAVLPVSALTGAGLPALKEALHALVR 324 >3P27-A nrPDB Length = 483 Score = 32.5 bits (73), Expect = 0.15, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 35/182 (19%) Query: 29 LVIGELGVGKTSIIKRYVHQ------------------------LFSQHYRATIGVDFAL 64 +V+G + GK++++ R ++ F+ T Sbjct: 37 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 96 Query: 65 KVLNW----DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW 120 ++ S + D G F + +A A + D ++ FE+ Sbjct: 97 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 155 Query: 121 KSDLDSKVHLPNGSPIPAVLLA-NKCDQNKDSSQSPSQVD-QFCKEHGFAGWFETSAKDN 178 + L + I +++A NK D S Q ++ + G+FE DN Sbjct: 156 DGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFE----DN 211 Query: 179 IN 180 IN Sbjct: 212 IN 213 >4U00-A nrPDB Length = 244 Score = 32.5 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 70/221 (31%), Gaps = 56/221 (25%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIG--VDFALKVLNWDSRTLVRLQLWDIAG 84 K+++IG G GK+++I+ TI DF + D L + D Sbjct: 32 KLVIIGPSGSGKSTLIR-------------TINRLEDFQEGEVVVDG-----LSVKDD-- 71 Query: 85 QERFGNMTRVYYKEAVGAFVVFDISR----SSTFEAVL-------KWKSDLDSKVHLPNG 133 + + VG +VF + E V +W + K L Sbjct: 72 ----RALRE--IRREVG--MVFQQFNLFPHMTVLENVTLAPMRVRRWPREKAEKKALELL 123 Query: 134 SPIPAVLLANK--CDQNKDSSQSPSQVDQFCKEHGFAGWFE-TSAKDNINIEEAA---RF 187 + + A K + Q + E + E TSA D + E R Sbjct: 124 ERVGILDQARKYPAQLSGGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVLDVMRD 183 Query: 188 LVE-----KILVNHQSFPNEEND----VDKIKLDQETLRAE 219 L + ++ + F E D +D ++ +E E Sbjct: 184 LAQGGMTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEE 224 >3GEE-A nrPDB Length = 476 Score = 32.5 bits (73), Expect = 0.16, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 55/162 (33%), Gaps = 20/162 (12%) Query: 29 LVIGELGVGKTSIIKRYVHQL--FSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQE 86 ++ G+ GK++++ + Q H T D+ + D +L D AG Sbjct: 237 VIAGKPNAGKSTLLNTLLGQERAIVSHMPGTT-RDYIEECFIHDKTM---FRLTDTAGLR 292 Query: 87 RFG------NMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVL 140 G + R K A +++ + T E + +++ + + Sbjct: 293 EAGEEIEHEGIRRSRMKMAEADLILY-LLDLGT-ERLDDELTEIRELKAAHPAAK--FLT 348 Query: 141 LANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIE 182 +ANK D + + + + + SA + I+ Sbjct: 349 VANKLD----RAANADALIRAIADGTGTEVIGISALNGDGID 386 >3IZQ-1 nrPDB Length = 611 Score = 32.2 bits (72), Expect = 0.18, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 59/182 (32%), Gaps = 35/182 (19%) Query: 29 LVIGELGVGKTSIIKRYVHQ------------------------LFSQHYRATIGVDFAL 64 +V+G + GK++++ R ++ F+ T Sbjct: 171 VVLGHVDAGKSTLMGRLLYDLNIVNQSQLRKLQRESETMGKSSFKFAWIMDQTNEERERG 230 Query: 65 KVLNW----DSRTLVRLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKW 120 ++ S + D G F + +A A + D ++ FE+ Sbjct: 231 VTVSICTSHFSTHRANFTIVDAPGHRDFVPNAIMGISQADMAILCVDC-STNAFESGFDL 289 Query: 121 KSDLDSKVHLPNGSPIPAVLLA-NKCDQNKDSSQSPSQVD-QFCKEHGFAGWFETSAKDN 178 + L + I +++A NK D S Q ++ + G+FE DN Sbjct: 290 DGQTKEHMLLASSLGIHNLIIAMNKMDNVDWSQQRFEEIKSKLLPYLVDIGFFE----DN 345 Query: 179 IN 180 IN Sbjct: 346 IN 347 >4AC9-A nrPDB Length = 482 Score = 32.2 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 13/91 (14%) Query: 132 NGSPIPAVLLANKCDQNKDSSQSPSQVD-----QFCKEHGFAGWFETSAKDNINIEEAAR 186 + IP +++ K D +++ Q + SAK ++E Sbjct: 122 DHFNIPIIVVITKSDNAGTEEIKRTEMIMKSILQSTHNLKNSSIIPISAKTGFGVDELKN 181 Query: 187 FLVE-----KILVNHQSF---PNEENDVDKI 209 ++ +I+ N +S+ P + K Sbjct: 182 LIITTLNNAEIIRNTESYFKMPLDHAFPIKG 212 >5EE0-A nrPDB Length = 395 Score = 32.2 bits (72), Expect = 0.19, Method: Composition-based stats. Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 27/182 (14%) Query: 11 LGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQH--------------YRA 56 A P K+ ++G VGK++ Y Sbjct: 11 AAPAERPILGRFSSHLKIGIVGLPNVGKSTFFNIVTKLSIPAENFPFCTIDPNEARVYVP 70 Query: 57 TIGVDFALKVLNWDSRTLVRLQLWDIAGQERFG----NMTRVY---YKEAVGAFVV---F 106 D+ ++ S L++ DIAG R + + + G F V F Sbjct: 71 DERFDWLCQLYKPKSEVSAYLEINDIAGLVRGAHAGEGLGNAFLSHIRAVDGIFHVLRAF 130 Query: 107 DISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHG 166 + + + + DL++ I + NK D + + S S Q EH Sbjct: 131 EDKEVTHIDDSVDPVRDLETIGEELRLKDIEF--VQNKID-DLEKSMKRSNDKQLKLEHE 187 Query: 167 FA 168 Sbjct: 188 LC 189 >1YE8-A nrPDB Length = 178 Score = 32.2 bits (72), Expect = 0.21, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 17/22 (77%) Query: 26 FKVLVIGELGVGKTSIIKRYVH 47 K+++ GE GVGKT+++K+ V Sbjct: 1 MKIIITGEPGVGKTTLVKKIVE 22 >6NOT-A nrPDB Length = 707 Score = 31.8 bits (71), Expect = 0.22, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 23/154 (14%) Query: 77 LQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 + + D G F + GA VFD V + ++ + + Sbjct: 85 INIIDTPGHVDFTIEVERSLRVLDGAVAVFD--------GVAGVEPQSETVWRQADKYNV 136 Query: 137 PAVLLANKCD-QNKD--SSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEKIL 193 P + NK D D + + IEE + +V I Sbjct: 137 PRMCFVNKMDRMGADFYRCVEMIKDRLGARSLIIQLPI--------GIEENFKGIVNLIK 188 Query: 194 VN----HQSFPNEENDVDKIKLDQETLRAENKSQ 223 + E + I D + AE +++ Sbjct: 189 MKAVIWKDESLGAEYFEEDIPADMQDKAAEYRAR 222 >6HZK-A nrPDB Length = 333 Score = 31.8 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 7/24 (29%), Positives = 14/24 (58%), Gaps = 3/24 (12%) Query: 27 KVLVIG---ELGVGKTSIIKRYVH 47 +V++IG + G GK++ + R Sbjct: 6 RVVLIGVAGDSGCGKSTFLNRLAD 29 >5I8Q-A nrPDB Length = 767 Score = 31.8 bits (71), Expect = 0.24, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 7/37 (18%) Query: 17 PAPETREHLFKV-------LVIGELGVGKTSIIKRYV 46 P R+ K+ + +GE G GKT+ I ++V Sbjct: 94 PVHAQRDEFLKLYQNNQIMVFVGETGSGKTTQIPQFV 130 >6I3O-A nrPDB Length = 677 Score = 31.8 bits (71), Expect = 0.27, Method: Composition-based stats. Identities = 27/165 (16%), Positives = 53/165 (32%), Gaps = 26/165 (15%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 ++V+GE G GKT+ + +Y+ + Y IG +V V ++ GQE Sbjct: 31 LIVVGETGSGKTTQVTQYLAEAGFTKYGM-IGCTQPRRVAAVSVAKRVAEEVGCQLGQEV 89 Query: 88 FGNMTRVYYKEAVGAFVVF-DISRSST-FEAVLKWKSDLDSKVHLPNGSPIPAVLLANKC 145 + F D++ +T + + + + +L Sbjct: 90 GYTIR-------------FEDVTSPATKIKYMTDGMLQREILMDPDLKRYSVIML----- 131 Query: 146 DQNKDSSQSPSQVDQFCKE----HGFAGWFETSA-KDNINIEEAA 185 D+ + + + + K+ TSA D E Sbjct: 132 DEAHERTIATDVLFALLKKTVKRRPDLKVIVTSATLDAEKFSEYF 176 >1WXQ-A nrPDB Length = 397 Score = 31.8 bits (71), Expect = 0.27, Method: Composition-based stats. Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 4/73 (5%) Query: 115 EAVLKW-KSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFET 173 E KW + DL + P V+ ANK D D ++ + + T Sbjct: 193 EDPTKWSQDDLLAFASEIRRVNKPMVIAANKADAASDEQIKRLVREEEKRGYIVIP---T 249 Query: 174 SAKDNINIEEAAR 186 SA + + +AA+ Sbjct: 250 SAAAELTLRKAAK 262 >6CS8-A nrPDB Length = 303 Score = 31.8 bits (71), Expect = 0.28, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 34/181 (18%) Query: 6 AGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTS----IIKRYVHQLFSQHYRATIGVD 61 L P + F +L++G GVGKT+ + +++ Q S A G Sbjct: 80 EMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAA--GDT 137 Query: 62 FALKVLNWDSRTLVRLQLWDIAGQERFGNMTR--VYYKEAVGAFVVFDISRSSTFEAVLK 119 F + +LQ+W GQ N + A A V+FD +++ + Sbjct: 138 FRAAAVE-------QLQVW---GQ---RNNIPVIAQHTGADSASVIFDAIQAAKARNIDV 184 Query: 120 WKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI 179 +D ++ NK ++ + + + E A Sbjct: 185 LIADTAGRLQ-------------NKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQ 231 Query: 180 N 180 N Sbjct: 232 N 232 >5A9Z-CA nrPDB Length = 593 Score = 31.4 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 33/129 (25%) Query: 37 GKTSIIKRYVH--QLFSQHYRATIGVDFALKVLNWDS-----------------RTLVRL 77 GKT+++ + + F + +V++ + + R+ Sbjct: 17 GKTTLVDKLLQQSGTFDSR------AETQERVMDSNDLEKERGITILAKNTAAIKWDYRI 70 Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 + D G FG +V D F+ + + K PI Sbjct: 71 NIVDTPGHADFGGEVERVMSMVDSVLLVVDA-----FDGPMPQTRFVTKKAFAYGLKPIV 125 Query: 138 AVLLANKCD 146 + NK D Sbjct: 126 VI---NKVD 131 >4YMS-J nrPDB Length = 240 Score = 31.4 bits (70), Expect = 0.29, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 21/49 (42%), Gaps = 5/49 (10%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVR 76 V++IG G GK+++++ + T G F V + + + Sbjct: 30 VVIIGPSGSGKSTLLRCI-----NLLEEPTKGEVFIDGVKINNGKVNIN 73 >4TLD-A nrPDB Length = 253 Score = 31.4 bits (70), Expect = 0.30, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 16/74 (21%) Query: 29 LVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL---------KVLNWDSRTLV---R 76 LV G G GKT ++++ + + V F + WD LV + Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGK 102 Query: 77 LQLWDIA----GQE 86 L + D + GQE Sbjct: 103 LFILDASPDPEGQE 116 >2P5T-B nrPDB Length = 253 Score = 31.4 bits (70), Expect = 0.33, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 1/53 (1%) Query: 14 AAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 66 + ++ + +L+ G+ G GKT+I R + F + G F + Sbjct: 21 SLTRGKKSSKQPIAILLGGQSGAGKTTI-HRIKQKEFQGNIVIIDGDSFRSQH 72 >1S0U-A nrPDB Length = 408 Score = 31.4 bits (70), Expect = 0.36, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 25/67 (37%), Gaps = 4/67 (5%) Query: 138 AVLLANKCDQNKDS--SQSPSQVDQFCKEHGF--AGWFETSAKDNINIEEAARFLVEKIL 193 +++ NK D + ++ Q+ +F K A SA NI+ + + + I Sbjct: 138 IIIVQNKIDLVDEKQAEENYEQIKEFVKGTIAENAPIIPISAHHEANIDVLLKAIQDFIP 197 Query: 194 VNHQSFP 200 + Sbjct: 198 TPKRDPD 204 >2NQL-A nrPDB Length = 388 Score = 31.4 bits (70), Expect = 0.37, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 15/28 (53%) Query: 67 LNWDSRTLVRLQLWDIAGQERFGNMTRV 94 D+ + + LWDIAGQE ++ + Sbjct: 118 FYVDALAALDIALWDIAGQEAGKSIRDL 145 >5GAD-l nrPDB Length = 497 Score = 31.0 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 34/181 (18%) Query: 6 AGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTS----IIKRYVHQLFSQHYRATIGVD 61 L P + F +L++G GVGKT+ + +++ Q S A G Sbjct: 274 EMGEILAKVDEPLNVEGKAPFVILMVGVNGVGKTTTIGKLARQFEQQGKSVMLAA--GDT 331 Query: 62 FALKVLNWDSRTLVRLQLWDIAGQERFGNMTR--VYYKEAVGAFVVFDISRSSTFEAVLK 119 F + +LQ+W GQ N + A A V+FD +++ + Sbjct: 332 FRAAAVE-------QLQVW---GQ---RNNIPVIAQHTGADSASVIFDAIQAAKARNIDV 378 Query: 120 WKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNI 179 +D ++ NK ++ + + + E A Sbjct: 379 LIADTAGRLQ-------------NKSHLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQ 425 Query: 180 N 180 N Sbjct: 426 N 426 >3S1A-A nrPDB Length = 525 Score = 31.0 bits (69), Expect = 0.39, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 16/74 (21%) Query: 29 LVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFAL---------KVLNWDSRTLV---R 76 LV G G GKT ++++ + + V F + WD LV + Sbjct: 43 LVSGTSGTGKTLFSIQFLYNGIIEFDEPGVFVTFEETPQDIIKNARSFGWDLAKLVDEGK 102 Query: 77 LQLWDIA----GQE 86 L + D + GQE Sbjct: 103 LFILDASPDPEGQE 116 >2QU8-A nrPDB Length = 228 Score = 31.0 bits (69), Expect = 0.44, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 71/207 (34%), Gaps = 38/207 (18%) Query: 28 VLVIGELGVGKTSIIKRYVH-QLFSQHYRATIGVDFALKVLNWD--SRTLVRLQLWDIAG 84 +++ G VGK+S + + Q Y F K L L + Q+ D G Sbjct: 32 IILSGAPNVGKSSFMNIVSRANVDVQSY------SFTTKNLYVGHFDHKLNKYQIIDTPG 85 Query: 85 Q-----E-----RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGS 134 E +T + + + DIS + L K ++ + + Sbjct: 86 LLDRAFENRNTIEMTTITALAHING-VILFIIDISE----QCGLTIKEQINLFYSIKSVF 140 Query: 135 PIPAVLLA-NKCD---QNKDSSQSPSQVDQFCKE-HGFAGWFETSAKDNINIEEAARFLV 189 ++++ NK D + S + + Q + S + +E+A + Sbjct: 141 SNKSIVIGFNKIDKCNMDSLSIDNKLLIKQILDNVKNPIKFSSFSTLTGVGVEQA-KITA 199 Query: 190 EKILVNHQSFPNEENDVDKIKLDQETL 216 ++L N Q+ + I LDQE L Sbjct: 200 CELLKNDQA--------ESILLDQEQL 218 >1YR7-A nrPDB Length = 262 Score = 31.0 bits (69), Expect = 0.44, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 30/120 (25%) Query: 28 VLVIGELGVGKTSII---KRYVHQLFSQHYRATIGVDFALKVL----NWDSRTLVRLQLW 80 V+ +G G GKT++ RY+ + Y + +D +K L + D R V ++ Sbjct: 17 VVFVGTAGSGKTTLTGEFGRYLEDNYKVAY---VNLDTGVKELPYEPSIDVREFVTVE-- 71 Query: 81 DIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAV-LKWKSDLDSKVHLPNGSPIPAV 139 M Y GA V +++ + K+ L+ + L + + Sbjct: 72 --------EIMREGY--GPNGAIV-------ESYDRLMEKFNEYLNKILRLEKENDYVLI 114 >4V89-AW nrPDB Length = 534 Score = 31.0 bits (69), Expect = 0.46, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 18/69 (26%), Gaps = 8/69 (11%) Query: 78 QLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIP 137 L D G E F T +V D A + + + P Sbjct: 85 NLLDTPGHEDFSEDTYRTLTAVDCCLMVID--------AAKGVEDRTRKLMEVTRLRDTP 136 Query: 138 AVLLANKCD 146 + NK D Sbjct: 137 ILTFMNKLD 145 >3H2Y-A nrPDB Length = 368 Score = 31.0 bits (69), Expect = 0.47, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 27/94 (28%), Gaps = 16/94 (17%) Query: 104 VVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQ---VDQ 160 +V I F W L V +L+ NK D S + + Sbjct: 72 LVVKIVDIFDFN--GSWLPGLHRFV-----GNNKVLLVGNKADLIPKSVKHDKVKHWMRY 124 Query: 161 FCKEHGFAG--WFETSAKDNINIEEAARFLVEKI 192 K+ G F SA I E L + I Sbjct: 125 SAKQLGLKPEDVFLISAAKGQGIAE----LADAI 154 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 20/55 (36%), Gaps = 10/55 (18%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDI 82 V V+G VGK++ I R + FS V+ L L DI Sbjct: 163 VYVVGCTNVGKSTFINRMIK-EFSDE---------TENVITTSHFPGTTLDLIDI 207 >1SUL-A nrPDB Length = 195 Score = 30.6 bits (68), Expect = 0.53, Method: Composition-based stats. Identities = 23/139 (16%), Positives = 46/139 (33%), Gaps = 39/139 (28%) Query: 28 VLVIGELGVGKTSIIKRYV--HQLFSQHYRA--TIGVDFAL-----KVLNWDSRTLVRLQ 78 + + G VGK+S I + L + T ++F + ++ ++ Sbjct: 26 IALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVS 85 Query: 79 LWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP--- 135 + +E +G M Y I+ +AV+ + H P+ Sbjct: 86 KSE---REAWGRMIETY------------ITTREELKAVV----QIVDLRHAPSNDDVQM 126 Query: 136 --------IPAVLLANKCD 146 IP +++A K D Sbjct: 127 YEFLKYYGIPVIVIATKAD 145 >2YYZ-A nrPDB Length = 359 Score = 30.6 bits (68), Expect = 0.58, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 5/43 (11%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWD 70 V ++G G GKT+ + Y+ T G + VL D Sbjct: 32 VALLGPSGCGKTTTLLMLA-----GIYKPTSGEIYFDDVLVND 69 >6F8Z-A nrPDB Length = 727 Score = 30.6 bits (68), Expect = 0.61, Method: Composition-based stats. Identities = 6/36 (16%), Positives = 11/36 (30%), Gaps = 5/36 (13%) Query: 60 VDFALKVLNWDSRTLVRLQLWDIAGQERFGNMTRVY 95 D+ + + + LWD F +Y Sbjct: 316 ADYTTRKVANNETHYTTFSLWDT-----FRASHPLY 346 >2YV5-A nrPDB Length = 302 Score = 30.2 bits (67), Expect = 0.65, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 13/22 (59%) Query: 28 VLVIGELGVGKTSIIKRYVHQL 49 ++ G GVGK+SI+ R + Sbjct: 168 CILAGPSGVGKSSILSRLTGEE 189 >3B5X-A nrPDB Length = 582 Score = 30.2 bits (67), Expect = 0.66, Method: Composition-based stats. Identities = 10/43 (23%), Positives = 18/43 (41%), Gaps = 4/43 (9%) Query: 5 GAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVH 47 G P L + P+ + V ++G G GK++I + Sbjct: 353 GKEKPALSHVSFSIPQGKT----VALVGRSGSGKSTIANLFTR 391 >1H65-A nrPDB Length = 270 Score = 30.2 bits (67), Expect = 0.67, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 33/99 (33%), Gaps = 16/99 (16%) Query: 1 MAGGGAGDPGLGAAAAPAPETREHLFKVL--------------VIGELGVGKTSIIKRYV 46 MA AP T+ L ++L V+G+ GVGK+S + + Sbjct: 1 MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSII 60 Query: 47 HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 + + + V+ SR L + D G Sbjct: 61 GERVVS--ISPFQSEGPRPVMVSRSRAGFTLNIIDTPGL 97 >5B3F-A nrPDB Length = 343 Score = 30.2 bits (67), Expect = 0.68, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 3/58 (5%) Query: 4 GGAGDPGLGAAAAPAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVD 61 G +L V G+ G GK++ R + +F + ++I VD Sbjct: 18 GSHMSQPENFREVIRHSPLVYLIGVA--GDSGSGKSTFT-RAISDIFGEELVSSITVD 72 >5C78-A nrPDB Length = 564 Score = 30.2 bits (67), Expect = 0.70, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 12/16 (75%) Query: 27 KVLVIGELGVGKTSII 42 K+ IGE G GK++++ Sbjct: 377 KIAFIGESGCGKSTLV 392 >6H7G-A nrPDB Length = 346 Score = 30.2 bits (67), Expect = 0.74, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 4/55 (7%) Query: 27 KVLVIG---ELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 K +VIG + G GK++ ++R + +F + G + L D T++ L Sbjct: 6 KTVVIGLAADSGCGKSTFMRR-MTSIFGGVPKPPAGGNPDSNTLISDMTTVICLD 59 >4N1A-A nrPDB Length = 589 Score = 30.2 bits (67), Expect = 0.74, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 22/45 (48%), Gaps = 5/45 (11%) Query: 29 LVIGELGVGKTSIIKRYVHQLFSQHYRAT----IGVDFALKVLNW 69 LV G+ GK++++ R + + Y I +D++ +L+ Sbjct: 387 LVFGDTECGKSNLL-RLITAGIIERYTPQQARLIFIDYSRSLLDV 430 >5IDV-A nrPDB Length = 279 Score = 30.2 bits (67), Expect = 0.76, Method: Composition-based stats. Identities = 8/20 (40%), Positives = 12/20 (60%) Query: 28 VLVIGELGVGKTSIIKRYVH 47 V ++G G GKTS++ V Sbjct: 68 VALVGRSGAGKTSLVNMLVR 87 >2GZA-A nrPDB Length = 361 Score = 30.2 bits (67), Expect = 0.80, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 2/34 (5%) Query: 28 VLVIGELGVGKTSIIKRYVHQL-FSQHYRATIGV 60 ++V GE G GKT+++K + ++ F Q TI Sbjct: 178 IVVAGETGSGKTTLMKALMQEIPFDQRLI-TIED 210 >2OUK-A nrPDB Length = 263 Score = 29.8 bits (66), Expect = 0.83, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%) Query: 28 VLVIGELGVGKTSIIKRY-VHQLFSQHYRATIGVDFALKVLNWDS 71 V+VIG G GK++ ++ + + F + G++ K N + Sbjct: 53 VVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGINLKAKDTNLNK 97 >5GM6-Y nrPDB Length = 876 Score = 29.8 bits (66), Expect = 0.85, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 8/45 (17%) Query: 17 PAPETREHLFK-------VLVIGELGVGKTSIIKRY-VHQLFSQH 53 P + ++ L + ++++GE G GKT+ + +Y V F+ Sbjct: 224 PVHQYKDELLQEIKKNQVLIIMGETGSGKTTQLPQYLVEDGFTDQ 268 >5Z1X-A nrPDB Length = 495 Score = 29.8 bits (66), Expect = 0.91, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%) Query: 67 LNWDSRTLVRLQLWDIAGQERFGN-MTRVYYKEAVGAFVVFDISRS 111 ++ + L Q+ D AG + + ++ Y GAFVV+D + Sbjct: 87 ISTGNSFLYNFQVPDQAGTYWYHSHLSTQYCDGLRGAFVVYDPTDP 132 >1JAL-A nrPDB Length = 363 Score = 29.8 bits (66), Expect = 0.93, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 14/74 (18%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRA--TIGVDF------------ALKVLNWDS 71 FK ++G VGK+++ TI + +++ + Sbjct: 3 FKCGIVGLPNVGKSTLFNALTKAGIEAANYPFCTIEPNTGVVPMPDPRLDALAEIVKPER 62 Query: 72 RTLVRLQLWDIAGQ 85 ++ DIAG Sbjct: 63 ILPTTMEFVDIAGL 76 >2QAG-B nrPDB Length = 427 Score = 29.8 bits (66), Expect = 0.95, Method: Composition-based stats. Identities = 8/28 (28%), Positives = 16/28 (57%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQH 53 F +L +GE G+GK++++ + F Sbjct: 43 FNILCVGETGLGKSTLMDTLFNTKFEGE 70 >3FVQ-A nrPDB Length = 359 Score = 29.8 bits (66), Expect = 0.98, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 12/26 (46%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQH 53 + +IG G GKT++++ Sbjct: 33 LFIIGASGCGKTTLLRCLAGFEQPDS 58 >3J81-k nrPDB Length = 527 Score = 29.8 bits (66), Expect = 0.99, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 25/73 (34%), Gaps = 18/73 (24%) Query: 138 AVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFE-----------TSAKDNINIEEAAR 186 ++L NK D +S + + + SA+ NI+ Sbjct: 244 VIILQNKVDL--MREESALEHQK-----SILKFIRGTIADGAPIVPISAQLKYNIDAVNE 296 Query: 187 FLVEKILVNHQSF 199 F+V+ I V + F Sbjct: 297 FIVKTIPVPPRDF 309 >2IYT-A nrPDB Length = 184 Score = 29.8 bits (66), Expect = 1.0, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 28/66 (42%), Gaps = 10/66 (15%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRL-QLWDIAGQ 85 K +++G G GK++I +R +GV + + RT + ++ G+ Sbjct: 4 KAVLVGLPGSGKSTIGRRLAKA---------LGVGLLDTDVAIEQRTGRSIADIFATDGE 54 Query: 86 ERFGNM 91 + F + Sbjct: 55 QEFRRI 60 >3WBG-A nrPDB Length = 153 Score = 29.8 bits (66), Expect = 1.1, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Query: 53 HYRATIGVDFALK-VLNWDSRTLVRLQLWDIAGQE 86 + T D +K ++ D LV LQ WD GQE Sbjct: 90 EFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 122 >6QUZ-B nrPDB Length = 599 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 27 KVLVIGELGVGKTS---IIKRY 45 KV ++G G GKT+ ++ R+ Sbjct: 383 KVALVGPTGSGKTTIVNLLMRF 404 >4A9A-A nrPDB Length = 376 Score = 29.5 bits (65), Expect = 1.1, Method: Composition-based stats. Identities = 16/113 (14%), Positives = 41/113 (36%), Gaps = 13/113 (11%) Query: 106 FDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEH 165 + I+ + DL + + +PA+ + NK D S S +++ + Sbjct: 220 YRINSAEIAFRCDATVDDLIDVLEASSRRYMPAIYVLNKID-----SLSIEELELLYRIP 274 Query: 166 GFAGWFETSAKDNINIEEAARFLVE-----KILVNHQSFPNEENDVDKIKLDQ 213 S+ + N++E + + + +I + + D ++ D+ Sbjct: 275 NAVP---ISSGQDWNLDELLQVMWDRLNLVRIYTKPKGQIPDFTDPVVLRSDR 324 >6C2V-A nrPDB Length = 115 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 2/33 (6%) Query: 28 VLVIGELGVGKTSI--IKRYVHQLFSQHYRATI 58 V+++G G GKT++ + R + T+ Sbjct: 5 VVIVGPSGAGKTTLDELARKAKEEVPDAEIRTV 37 >6G12-A nrPDB Length = 301 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 7/70 (10%) Query: 16 APAPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQH-YRATIGVDFALKVLNWDSRTL 74 A + + +++G VGK+++I + + +Q + GV + + + Sbjct: 118 EKAKGLKPRAIRAMIVGIPNVGKSTLINKLAKRSIAQTGNKP--GVTKQQQWIKVGN--- 172 Query: 75 VRLQLWDIAG 84 LQL D G Sbjct: 173 -ALQLLDTPG 181 >6AQ1-A nrPDB Length = 136 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%) Query: 53 HYRATIGVDFALK-VLNWDSRTLVRLQLWDIAGQE 86 + T D +K ++ D LV LQ WD GQE Sbjct: 73 EFDETTADDRKVKSIVTLDGGKLVHLQKWD--GQE 105 >3DEF-A nrPDB Length = 262 Score = 29.5 bits (65), Expect = 1.2, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQ 85 VLV+G+ GVGK+S + + + + + + V+ + + + D G Sbjct: 39 VLVLGKGGVGKSSTVNSLIGEQVVR--VSPFQAEGLRPVMVSRTMGGFTINIIDTPGL 94 >3LLM-A nrPDB Length = 235 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 8/26 (30%), Positives = 16/26 (61%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQH 53 V++ G G GKT+ + +++ F Q+ Sbjct: 79 VIIRGATGCGKTTQVPQFILDDFIQN 104 >2PJZ-A nrPDB Length = 263 Score = 29.5 bits (65), Expect = 1.3, Method: Composition-based stats. Identities = 7/16 (43%), Positives = 13/16 (81%) Query: 27 KVLVIGELGVGKTSII 42 KV+++G G GKT+++ Sbjct: 32 KVIILGPNGSGKTTLL 47 >1Z6G-A nrPDB Length = 218 Score = 29.5 bits (65), Expect = 1.4, Method: Composition-based stats. Identities = 8/30 (26%), Positives = 19/30 (63%), Gaps = 1/30 (3%) Query: 25 LFKVLVIGELGVGKTSIIKRYVHQLFSQHY 54 ++ +++ G GVGK ++IK+ + F ++ Sbjct: 23 IYPLVICGPSGVGKGTLIKKLL-NEFPNYF 51 >5JSZ-B nrPDB Length = 287 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 5/32 (15%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIG 59 + ++G G GK++++ Q F+ + T G Sbjct: 36 IALVGHTGSGKSTLM-----QHFNALLKPTSG 62 >2OHF-A nrPDB Length = 396 Score = 29.1 bits (64), Expect = 1.4, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 14/74 (18%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRA--TIG------------VDFALKVLNWDS 71 K+ ++G VGK++ + S TI DF + S Sbjct: 23 LKIGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNESRVPVPDERFDFLCQYHKPAS 82 Query: 72 RTLVRLQLWDIAGQ 85 + L + DIAG Sbjct: 83 KIPAFLNVVDIAGL 96 >6HA8-V nrPDB Length = 548 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 8/17 (47%), Positives = 12/17 (70%) Query: 27 KVLVIGELGVGKTSIIK 43 KV +IG G GKT+++ Sbjct: 325 KVAIIGPNGSGKTTLLN 341 >3V9H-A nrPDB Length = 566 Score = 29.1 bits (64), Expect = 1.5, Method: Composition-based stats. Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 7/39 (17%) Query: 108 ISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 + + +F + KW SP +L KCD Sbjct: 394 VIDAKSFARIKKWLE-------HARSSPSLTILAGGKCD 425 >2ZBL-A nrPDB Length = 421 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 12/67 (17%) Query: 61 DFALKVLN---WDSRTLVRLQLWDIA-GQ-ERFGNMTRVYYKEAVGAFVVFDISRSSTFE 115 D+ ++V+ W + L+ WD A Q E + +V+D++ Sbjct: 136 DYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRG-GNANMHAVEAFLIVYDVTHD---- 190 Query: 116 AVLKWKS 122 KW Sbjct: 191 --KKWLD 195 >1R6B-X nrPDB Length = 758 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 4/28 (14%) Query: 29 LVIGELGVGKTS----IIKRYVHQLFSQ 52 L++GE GVGKT+ + R V + Sbjct: 211 LLVGESGVGKTAIAEGLAWRIVQGDVPE 238 >5ZLU-EE nrPDB Length = 497 Score = 29.1 bits (64), Expect = 1.6, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 16/40 (40%) Query: 27 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKV 66 KV + G G GKTS++K + + + + Sbjct: 324 KVAITGSNGTGKTSLLKMISERADGLTISPKAEIGYFTQT 363 >6N0I-A nrPDB Length = 706 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 8/71 (11%) Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R + D G F + GA VVF + ++ W+ +K H+P + Sbjct: 87 RFNIIDTPGHVDFTIEVERSLRVLDGAVVVFSGADGVEPQSETVWRQ--ANKYHVPRLAY 144 Query: 136 IPAVLLANKCD 146 I NK D Sbjct: 145 I------NKMD 149 >2WJG-A nrPDB Length = 188 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 37/196 (18%), Positives = 67/196 (34%), Gaps = 28/196 (14%) Query: 26 FKVLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 +++ +IG VGK++I ++ ++ + V+ ++ + ++ D+ G Sbjct: 8 YEIALIGNPNVGKSTIFNALTGENVYIGNW-PGVTVEKKEGEFEYNGE---KFKVVDLPG 63 Query: 85 QERFGNMTRVYYKE---AVGAF-----VVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 ++T E +V +I ++ E L L Sbjct: 64 ---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEM-------GA 113 Query: 137 PAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE---AARFLVEKIL 193 +L NK D K VD+ K G SA + IEE A V+ Sbjct: 114 NLLLALNKMDLAKSLGI-EIDVDKLEKILGVKV-VPLSAAKKMGIEELKKAISIAVKDKK 171 Query: 194 VNHQSFPNEENDVDKI 209 +PN E + KI Sbjct: 172 TAEIKYPNFEPYIKKI 187 >4Q7L-A nrPDB Length = 256 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 8/22 (36%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 27 KVLVIGELGVGKTS---IIKRY 45 KV ++G G GKT+ ++ R+ Sbjct: 33 KVALVGPTGSGKTTIVNLLMRF 54 >2KHQ-A nrPDB Length = 110 Score = 29.1 bits (64), Expect = 1.7, Method: Composition-based stats. Identities = 10/49 (20%), Positives = 19/49 (38%), Gaps = 2/49 (4%) Query: 151 SSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAARFLVEK--ILVNHQ 197 ++ +F E+G +ET K N I A + + ++ N Sbjct: 45 KDIKRTEYQKFLNEYGLTHSYETIRKLNSYIRNAFDDAIHEGYVIKNPT 93 >6GUA-A nrPDB Length = 822 Score = 29.1 bits (64), Expect = 1.8, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 33/89 (37%), Gaps = 14/89 (15%) Query: 140 LLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEEAA---------RFLVE 190 ++A+K Q + + + ++ + + ++AKD ++ L Sbjct: 604 IVASK--QPRQQWFTKEEAEKLATDGIATIDWASTAKDGEAVDLVFASAGAEPTIETLAA 661 Query: 191 KILVN---HQSFPNEENDVDKIKLDQETL 216 LVN Q+ N V+ +L ++ Sbjct: 662 LHLVNEVFPQAKFRYVNVVELGRLQKKKG 690 >5OWV-A nrPDB Length = 732 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%) Query: 26 FKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 F + + G + GK+S++ + + F + I L VL++ ++ WD Sbjct: 163 FNIAITGVMNAGKSSLLNALLKEDFLG--VSNIPETANLTVLSYGKSEEAKIYFWD 216 >3ZJC-A nrPDB Length = 305 Score = 28.7 bits (63), Expect = 1.9, Method: Composition-based stats. Identities = 5/28 (17%), Positives = 15/28 (53%) Query: 13 AAAAPAPETREHLFKVLVIGELGVGKTS 40 E+ + +++++G+ G GK++ Sbjct: 1 GPLGSMAESEDRSLRIVLVGKTGSGKSA 28 >4MYH-A nrPDB Length = 598 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 6/22 (27%), Positives = 13/22 (59%), Gaps = 3/22 (13%) Query: 27 KVLVIGELGVGKTS---IIKRY 45 K ++G G GK++ ++ R+ Sbjct: 367 KTAIVGSSGSGKSTILKLVFRF 388 >6FA9-A nrPDB Length = 655 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 9/22 (40%), Positives = 17/22 (77%) Query: 28 VLVIGELGVGKTSIIKRYVHQL 49 ++++GE G GKT+ I +Y+H+ Sbjct: 50 LILVGETGSGKTTQIPQYLHEA 71 >5MKK-A nrPDB Length = 611 Score = 28.7 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 3/22 (13%) Query: 27 KVLVIGELGVGKT---SIIKRY 45 KV ++G G GKT S+I R+ Sbjct: 387 KVALVGATGAGKTSVVSLIARF 408 >1K1G-A nrPDB Length = 131 Score = 28.7 bits (63), Expect = 2.2, Method: Composition-based stats. Identities = 10/37 (27%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Query: 175 AKDNINIEEAARFLVEKILVNHQSFPNEENDVDKIKL 211 A N+++A + IL P ++ND+ K++L Sbjct: 80 ANTMENVKKAVEQI-RNILKQGIETPEDQNDLRKMQL 115 >5VHD-D nrPDB Length = 870 Score = 28.7 bits (63), Expect = 2.3, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 15/24 (62%) Query: 29 LVIGELGVGKTSIIKRYVHQLFSQ 52 ++ GE G GKT+ + +++ + + Sbjct: 80 VISGETGCGKTTQVTQFILDNYIE 103 >4RY2-A nrPDB Length = 730 Score = 28.3 bits (62), Expect = 2.4, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 11/14 (78%) Query: 28 VLVIGELGVGKTSI 41 V ++GE G GKT++ Sbjct: 518 VAIVGESGSGKTTL 531 >5TV2-A nrPDB Length = 405 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 25/71 (35%), Gaps = 8/71 (11%) Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R+ + D G F + GA VVF S ++ W+ + Sbjct: 83 RVNIIDTPGHVDFTIEVERSLRVLDGAVVVFCGSSGVEPQSETVWRQ--------ADKYH 134 Query: 136 IPAVLLANKCD 146 +P ++ NK D Sbjct: 135 VPRMVFVNKMD 145 >6HCM-k1 nrPDB Length = 599 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQH--YRATIGVDFALKVLNWDSRTLVR 76 ++++GE G GKT+ I+ +L + V + + ++ S VR Sbjct: 375 MVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKSTGSVR 425 >5MRE-WW nrPDB Length = 401 Score = 28.3 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 8/18 (44%), Positives = 13/18 (72%) Query: 27 KVLVIGELGVGKTSIIKR 44 K ++ GE GVGKT ++ + Sbjct: 96 KFIITGEPGVGKTVLLSQ 113 >5K1B-B nrPDB Length = 677 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 19/106 (17%) Query: 115 EAVLKWKSDLDSKVHLPNGSPIPAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETS 174 E V +W D+ ++P + IP L S + K+ S Sbjct: 544 ETVPQWVIDITVDKNMPKFNKIPFYL-----------QPHASSGAKTLKKDRL------S 586 Query: 175 AKDNINIEEAARFLVEKI--LVNHQSFPNEENDVDKIKLDQETLRA 218 A D + + + + EKI L N + N+ + ++E A Sbjct: 587 ASDMLQVRKVMEHVYEKIINLDNESQTTSSSNNEKPGEQEKEEDIA 632 >4QIW-C nrPDB Length = 391 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 7/54 (12%) Query: 32 GELGVGKTSIIKRYVHQLFSQHYRATIGVDFA--LKVLNWDSRTLVRLQLWDIA 83 G GVGKT I R + T G +F LKV D +W+IA Sbjct: 225 GLSGVGKT--IIRKEGDEYV---IYTEGSNFKQVLKVPGVDPTRTRTNNIWEIA 273 >5LKM-A nrPDB Length = 452 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 57/145 (39%), Gaps = 26/145 (17%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAGQER 87 VL+ G+ G+GK++++ + QL T+ L V +S ++L+ ER Sbjct: 91 VLIGGDPGIGKSTLLLQVSTQL---SQVGTV-----LYVSGEESAQQIKLR------AER 136 Query: 88 FGNMTRVYYKEAVGAFVVFDISRSSTFEA-VLKWKSDLDSKVHLPNGSPIPAVLLANKCD 146 G++ +Y ++ + + A V + + D + P + + Sbjct: 137 LGDIDSEFY--------LYAETNMQSVRAEVERIQPDFLI-IDSIQTIMSPEI-SGVQGS 186 Query: 147 QNKDSSQSPSQVDQFCKEHGFAGWF 171 ++ + +++ Q K + A + Sbjct: 187 VSQVREVT-AELMQLAKTNNIAIFI 210 >2RGK-A nrPDB Length = 421 Score = 28.3 bits (62), Expect = 2.6, Method: Composition-based stats. Identities = 11/67 (16%), Positives = 23/67 (34%), Gaps = 12/67 (17%) Query: 61 DFALKVLN---WDSRTLVRLQLWDIAGQ--ERFGNMTRVYYKEAVGAFVVFDISRSSTFE 115 D+ ++++ W + L+ WD A E + +V+D++ Sbjct: 136 DYTIEIIEKYFWSEEEQMCLESWDEAFSKTEEYRG-GNANMHAVEAFLIVYDVTHD---- 190 Query: 116 AVLKWKS 122 KW Sbjct: 191 --KKWLD 195 >5D0U-A nrPDB Length = 714 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 9/19 (47%), Positives = 14/19 (73%) Query: 28 VLVIGELGVGKTSIIKRYV 46 ++ +GE G GKT+ I +YV Sbjct: 57 LVFVGETGSGKTTQIPQYV 75 >6G2G-A nrPDB Length = 310 Score = 28.3 bits (62), Expect = 2.7, Method: Composition-based stats. Identities = 6/19 (31%), Positives = 13/19 (68%) Query: 28 VLVIGELGVGKTSIIKRYV 46 +++ G+ GVGK+S+ + Sbjct: 11 LVLSGKGGVGKSSVTTQLA 29 >4V7D-BZ nrPDB Length = 711 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 8/71 (11%) Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R+ + D G F + GA +V+ AV + ++ N Sbjct: 82 RINIIDTPGHVDFTIEVERSMRVLDGAVMVY--------CAVGGVQPQSETVWRQANKYK 133 Query: 136 IPAVLLANKCD 146 +P + NK D Sbjct: 134 VPRIAFVNKMD 144 >6BK7-A nrPDB Length = 407 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 24/150 (16%), Positives = 50/150 (33%), Gaps = 14/150 (9%) Query: 76 RLQLWDIAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSP 135 R+ + D G F + + GA V D + W+ + K Sbjct: 79 RVNIIDTPGHVDFTIEVQRSLRVLDGAVTVLDSQSGVEPQTETVWRQATEYK-------- 130 Query: 136 IPAVLLANKCD-QNKDSSQSPSQVDQFCKEHGFAGWFETSAKDN-INIEEAARFLVEKIL 193 +P ++ NK D D S + + + A+++ I + + +I Sbjct: 131 VPRIVFCNKMDKIGADFFYSVESLHDRLQANAHPIQIPIGAEEDFTGIIDLIKMKA-EIY 189 Query: 194 VNHQSFPNEENDVDKIKLDQETLRAENKSQ 223 N +E D+ + L++ E + + Sbjct: 190 TNDLGTDIQETDIPEDYLEKAQ---EWREK 216 >5D4W-A nrPDB Length = 926 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 9/14 (64%), Positives = 13/14 (92%) Query: 29 LVIGELGVGKTSII 42 ++IGE GVGKT+I+ Sbjct: 220 VLIGEPGVGKTTIV 233 >2WJI-A nrPDB Length = 165 Score = 28.3 bits (62), Expect = 2.8, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 25/167 (14%) Query: 26 FKVLVIGELGVGKTSIIKRYV-HQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIAG 84 +++ +IG VGK++I ++ ++ + V+ ++ + ++ D+ G Sbjct: 4 YEIALIGNPNVGKSTIFNALTGENVYIGNW-PGVTVEKKEGEFEYNGE---KFKVVDLPG 59 Query: 85 QERFGNMTRVYYKE---AVGAF-----VVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPI 136 ++T E +V +I ++ E L L Sbjct: 60 ---VYSLTANSIDEIIARDYIINEKPDLVVNIVDATALERNLYLTLQLMEM-------GA 109 Query: 137 PAVLLANKCDQNKDSSQSPSQVDQFCKEHGFAGWFETSAKDNINIEE 183 +L NK D K VD+ K G SA + IEE Sbjct: 110 NLLLALNKMDLAKSLGI-EIDVDKLEKILGVKV-VPLSAAKKMGIEE 154 >3VX4-A nrPDB Length = 273 Score = 28.3 bits (62), Expect = 3.1, Method: Composition-based stats. Identities = 7/15 (46%), Positives = 11/15 (73%) Query: 27 KVLVIGELGVGKTSI 41 KV ++G G GKT++ Sbjct: 63 KVSLVGASGSGKTTL 77 >3PV0-A nrPDB Length = 381 Score = 27.9 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 5/15 (33%), Positives = 11/15 (73%) Query: 28 VLVIGELGVGKTSII 42 V+ +G G GK++++ Sbjct: 32 VVFVGPSGCGKSTLL 46 >2P65-A nrPDB Length = 187 Score = 27.9 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 7/14 (50%), Positives = 13/14 (92%) Query: 29 LVIGELGVGKTSII 42 +++G+ GVGKT+I+ Sbjct: 47 ILLGDPGVGKTAIV 60 >5CA8-A nrPDB Length = 692 Score = 27.9 bits (61), Expect = 3.9, Method: Composition-based stats. Identities = 6/24 (25%), Positives = 12/24 (50%) Query: 28 VLVIGELGVGKTSIIKRYVHQLFS 51 + V G GK++++ R + F Sbjct: 61 ISVFGSQSTGKSTLLNRLFNTNFD 84 >5KST-A nrPDB Length = 270 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 15/45 (33%), Gaps = 3/45 (6%) Query: 87 RFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLP 131 F + Y D++R E V +W L + + P Sbjct: 220 DFDAVRNTYISITPIHV---DLTRYQALENVTRWTDRLTAHMDWP 261 >4MJX-A nrPDB Length = 336 Score = 27.5 bits (60), Expect = 4.3, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 28/78 (35%), Gaps = 14/78 (17%) Query: 162 CKEHGFAGWFETSAKDNINIEEAARFLVEK---------ILVNHQSFPN--EENDVDKIK 210 C + G + E S+KD IE + FL IL H+ F + +I Sbjct: 228 CIQEGDILFIEDSSKDAATIERSFSFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEIL 287 Query: 211 LD---QETLRAENKSQCC 225 L+ + + CC Sbjct: 288 LEVLQNQRIPLLADFDCC 305 >4IXM-A nrPDB Length = 318 Score = 27.5 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Query: 29 LVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSR 72 L+ G LG GKT+++ R++ + A I +F ++ D + Sbjct: 8 LLTGFLGAGKTTLL-RHILNEQHGYKIAVIENEFGE--VSVDDQ 48 >6B9O-A nrPDB Length = 981 Score = 27.2 bits (59), Expect = 5.4, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 16/123 (13%) Query: 19 PETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQ 78 E +V+ G G ++ + F HY G +F ++ V LQ Sbjct: 178 KRKAEKSLEVVWRGSKTFGSSA---QIFANAFPGHYGPPNGFNFEVR------NNFVPLQ 228 Query: 79 ----LWDIAGQERFGNMTRVYYKEAVGAF---VVFDISRSSTFEAVLKWKSDLDSKVHLP 131 L+D +ER N +A +++ + ++ W +D +H Sbjct: 229 DDPRLFDTNVEERVQNFIDAALTQAKITRTNHIMWTMGDDFQYQYAESWFKQMDKLIHHV 288 Query: 132 NGS 134 N Sbjct: 289 NKD 291 >2XUA-A nrPDB Length = 266 Score = 27.2 bits (59), Expect = 5.5, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 7/81 (8%) Query: 105 VFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL-ANKCDQNKDSSQSPSQVDQFCK 163 VF + + + + D + P G +PA+++ D + +P+Q + + Sbjct: 177 VFVHTDKEGYASNCEAIDAADLRPEAP-GIKVPALVISGT-----HDLAATPAQGRELAQ 230 Query: 164 EHGFAGWFETSAKDNINIEEA 184 A + E A NIE A Sbjct: 231 AIAGARYVELDASHISNIERA 251 >2WIC-A nrPDB Length = 267 Score = 26.8 bits (58), Expect = 7.9, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 36/150 (24%), Gaps = 24/150 (16%) Query: 30 VIGELGVGKTSIIKRYVHQLF--------SQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81 +IG GKT++ + + + I +V D L Sbjct: 8 LIGNPNSGKTTLFNQLTGARQRVGNWAGVTVERKEGIFATTDHQVTLVDLPGTYSLTT-- 65 Query: 82 IAGQERFGNMTRVYYK---EAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPA 138 I+ Q +Y +A V D S IP Sbjct: 66 ISSQTSLDEQIACHYILSGDADMLINVVDASN----------LERNLYLTLQLLELGIPC 115 Query: 139 VLLANKCDQNKDSSQSPSQVDQFCKEHGFA 168 V+ N D + +D G Sbjct: 116 VVALNMLDIAEKQQV-RIDIDALAARLGCP 144 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.152 0.450 Lambda K H 0.267 0.0468 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,539,233 Number of Sequences: 36641 Number of extensions: 416987 Number of successful extensions: 3053 Number of sequences better than 10.0: 388 Number of HSP's better than 10.0 without gapping: 417 Number of HSP's successfully gapped in prelim test: 171 Number of HSP's that attempted gapping in prelim test: 1814 Number of HSP's gapped (non-prelim): 652 length of query: 225 length of database: 10,336,785 effective HSP length: 94 effective length of query: 131 effective length of database: 6,892,531 effective search space: 902921561 effective search space used: 902921561 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.1 bits) S2: 58 (26.8 bits)