BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q13564 (534 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1TT5-A nrPDB 1096 0.0 6CWZ-C nrPDB 102 3e-22 4P22-A nrPDB 79 5e-15 4RDI-A nrPDB 51 1e-06 3KYD-B nrPDB 51 1e-06 3KYC-B nrPDB 51 1e-06 2NVU-B nrPDB 49 4e-06 1YOV-B nrPDB 49 4e-06 5FF5-A nrPDB 41 0.001 3H5A-A nrPDB 41 0.001 1JWB-B nrPDB 41 0.002 4YZP-A nrPDB 36 0.049 1ZFN-A nrPDB 32 0.95 5T3T-A nrPDB 32 1.0 5HKV-Q nrPDB 29 4.5 3F8M-A nrPDB 28 6.8 4UTP-A nrPDB 28 7.9 >1TT5-A nrPDB Length = 531 Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust. Identities = 529/534 (99%), Positives = 529/534 (99%), Gaps = 5/534 (0%) Query: 1 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 60 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII Sbjct: 3 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 62 Query: 61 DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFF 120 DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFF Sbjct: 63 DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFF 122 Query: 121 CRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNAL 180 CRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNAL Sbjct: 123 CRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNAL 182 Query: 181 EDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK 240 EDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK Sbjct: 183 EDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK 242 Query: 241 EDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQ 300 EDFRDLIRQGILK PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQ Sbjct: 243 EDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQ 297 Query: 301 TPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNH 360 TPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNH Sbjct: 298 TPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNH 357 Query: 361 VAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPD 420 VAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPD Sbjct: 358 VAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPD 417 Query: 421 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 480 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH Sbjct: 418 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 477 Query: 481 EFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534 EFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL Sbjct: 478 EFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 531 >6CWZ-C nrPDB Length = 346 Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 55/162 (33%), Positives = 84/162 (51%), Gaps = 3/162 (1%) Query: 12 KYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAG 71 +YDRQ+RLWG Q+ L ++ V L+ G EI KNL+L G+ T++D QV+ ED G Sbjct: 18 QYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPG 77 Query: 72 NNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQL 131 F ++ S+G+NRAEA++E Q LN V V+ E++ SFF +F V T Sbjct: 78 AQFLIRTGSVGRNRAEASLERAQNLNPMVD---VKVDTEDIEKKPESFFTQFDAVCLTCC 134 Query: 132 PESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIE 173 +++ + + I +G GY + EH +E Sbjct: 135 SRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGEHEFVE 176 Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 5/100 (5%) Query: 426 YLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRY 485 Y +L+ + +F +GR P Y EED L L G+S D +F RY Sbjct: 240 YFLLQVLLKFRTDKGRDPSSDTY--EEDSELLLQIRNDVLDSLGIS---PDLLPEDFVRY 294 Query: 486 GAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGM 525 +E + A +GG AQE++K ++++ NN + + GM Sbjct: 295 CFSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGM 334 >4P22-A nrPDB Length = 446 Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 74/270 (27%), Positives = 107/270 (39%), Gaps = 52/270 (19%) Query: 8 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSG 67 + E Y RQL + G + L+++ V + G EI KN++L G+ + T+ D Sbjct: 57 IDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTAQW 116 Query: 68 EDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDV-----SGSFVEESPENLLDNDPSFFCR 122 D + F+L+ IGKNRAE + L ELNS V +G VE+ F Sbjct: 117 ADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTGPLVED-----------FLSG 165 Query: 123 FTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIES----HPDN 178 F VVV T P LR+ + N I L++ T GL G + E ++ P + Sbjct: 166 FQVVVLTNTPLEDQLRVGEFCHNRGIKLVVADTRGLFGQLFCDFGEEMILTDSNGEQPLS 225 Query: 179 ALEDLRL-DKP-----FPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGR 232 A+ + D P E R F+S D + Q E NG Sbjct: 226 AMVSMVTKDNPGVVTCLDEARHGFESGDFVSFSE----------------VQGMVELNGN 269 Query: 233 IPKTYK----------EKEDFRDLIRQGIL 252 P K + +F D IR GI+ Sbjct: 270 QPMEIKVLGPYTFSICDTSNFSDYIRGGIV 299 Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust. Identities = 35/146 (23%), Positives = 66/146 (45%), Gaps = 18/146 (12%) Query: 383 LCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIV----------LYLMLRAV 432 +C S F +R +++ I+ +++S+ PD + L++ +A+ Sbjct: 284 ICDTSNFSDYIRGGIVSQVKVPKKISFKSLVASLAEPDFVVTDFAKFSRPAQLHIGFQAL 343 Query: 433 DRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVM----VKDDYVHEFCRYGAA 488 +F Q GR P N +ED +L + L + L + + +D + + A Sbjct: 344 HQFCAQHGRPPRPRN---DEDAAELVA-LAQAVNARALPAVQQNNLDEDLIRKLAYVAAG 399 Query: 489 EPHTIAAFLGGAAAQEVIKIITKQFV 514 + I AF+GG AAQEV+K + +F+ Sbjct: 400 DLAPINAFIGGLAAQEVMKACSGKFM 425 >4RDI-A nrPDB Length = 288 Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 2/105 (1%) Query: 10 EQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 Q++ RL+G+ + AH+C++ G+ + L GIG+ T+ID + V + Sbjct: 30 RQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTN 89 Query: 70 AGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE--SPENL 112 R ++G +AE E ++++N + + V++ +P+N+ Sbjct: 90 TNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNV 134 >3KYD-B nrPDB Length = 551 Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%) Query: 26 EALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 85 EA+ V ++ A G E+LKNLVL G +ID + + + F Q+ +G+++ Sbjct: 15 EAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSK 74 Query: 86 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWN 145 A+ A E + + + +S N D + FF +F +V+ + + + Sbjct: 75 AQVAKESVLQFYPKANIVAYHDSIMN-PDYNVEFFRQFILVMNALDNRAARNHVNRMCLA 133 Query: 146 SQIPLLICRTYGLVGYMRIIIKE-HPVIESHP 176 + +PL+ T G +G + I K E HP Sbjct: 134 ADVPLIESGTAGYLGQVTTIKKGVTECYECHP 165 >3KYC-B nrPDB Length = 660 Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%) Query: 26 EALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 85 EA+ V ++ A G E+LKNLVL G +ID + + + F Q+ +G+++ Sbjct: 33 EAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSK 92 Query: 86 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWN 145 A+ A E + + + +S N D + FF +F +V+ + + + Sbjct: 93 AQVAKESVLQFYPKANIVAYHDSIMN-PDYNVEFFRQFILVMNALDNRAARNHVNRMCLA 151 Query: 146 SQIPLLICRTYGLVGYMRIIIKE-HPVIESHP 176 + +PL+ T G +G + I K E HP Sbjct: 152 ADVPLIESGTAGYLGQVTTIKKGVTECYECHP 183 >2NVU-B nrPDB Length = 805 Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 3/103 (2%) Query: 25 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 84 Q L++ V +I A G E+LKNL L G +ID + + + F + IG+ Sbjct: 406 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 465 Query: 85 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVV 127 +AE A EF LN V V + D + +F+ +F ++V Sbjct: 466 KAEVAAEF---LNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIV 505 >1YOV-B nrPDB Length = 444 Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 3/104 (2%) Query: 25 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 84 Q L++ V +I A G E+LKNL L G +ID + + + F + IG+ Sbjct: 45 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 104 Query: 85 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVA 128 +AE A EF LN V V + D + +F+ +F ++V Sbjct: 105 KAEVAAEF---LNDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVC 145 >5FF5-A nrPDB Length = 381 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/76 (27%), Positives = 36/76 (47%) Query: 25 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 84 QE L+ + V + GT L + GIG+ +IDG+ V + + +GKN Sbjct: 127 QERLKQSKVAIFGMGGWGTWCALQLAMSGIGTLRLIDGDDVELSNINRQVLYRTDDVGKN 186 Query: 85 RAEAAMEFLQELNSDV 100 + +AA + + N +V Sbjct: 187 KVDAAKDTILAYNENV 202 >3H5A-A nrPDB Length = 358 Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 43/101 (42%), Gaps = 6/101 (5%) Query: 9 KEQKYDRQLRLWGDHG------QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDG 62 + +Y R + +G Q+ L++A V ++ G + L GIG +ID Sbjct: 88 ENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDN 147 Query: 63 NQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGS 103 +Q+ + +GKN+ E L + NS++S S Sbjct: 148 DQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVS 188 >1JWB-B nrPDB Length = 249 Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 7/107 (6%) Query: 12 KYDRQLRLWGDH--GQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 +Y+RQ+ L G GQEAL+ + V ++ G + L G+G+ T++D + VS + Sbjct: 11 RYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSN 70 Query: 70 AGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDND 116 +++G+ + E+A + L +N ++ +P N L +D Sbjct: 71 LQRQTLHSDATVGQPKVESARDALTRINPHIA-----ITPVNALLDD 112 >4YZP-A nrPDB Length = 536 Score = 35.8 bits (81), Expect = 0.049, Method: Compositional matrix adjust. Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 21/160 (13%) Query: 341 KLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRC----- 395 KL V+++ A++ N +LL I P +S ++ LL N L ++R Sbjct: 136 KLGKVWKQIAER----FKNKSERLLFEIVNEPTGMSAYQMNLL--NREMLNIIRSTGGKN 189 Query: 396 -RSLAEEYGLDTINKDEIISSMDNPDNE--IVLYLMLRAVDRFHKQQGRYPGVSNYQVEE 452 + L GL+ NKDE++ S + PD++ ++ Y D GR S ++ E Sbjct: 190 GQRLVIVGGLED-NKDELLHSFEPPDDDRIVLTYHYYSPWDYVSNWWGRTTWGSAAEISE 248 Query: 453 DIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCRYGAAEPHT 492 +K F++E G V++ E+ GA E H+ Sbjct: 249 MEEDIKPVYEKFVRE-GYPVIIG-----EYGTLGANEKHS 282 >1ZFN-A nrPDB Length = 253 Score = 31.6 bits (70), Expect = 0.95, Method: Compositional matrix adjust. Identities = 21/98 (21%), Positives = 43/98 (43%), Gaps = 2/98 (2%) Query: 12 KYDRQLRL--WGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 +Y RQ+ L GQ+ L + V +I GT L G+G+ + D + V + Sbjct: 10 RYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSN 69 Query: 70 AGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE 107 I + +++ + + L +LN D+ + +++ Sbjct: 70 LQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQ 107 >5T3T-A nrPDB Length = 193 Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 20/29 (68%) Query: 76 LQRSSIGKNRAEAAMEFLQELNSDVSGSF 104 L+R +G+++AE +E Q L+SD GSF Sbjct: 99 LRREGLGQDQAEPVLEVYQRLHSDKGGSF 127 >5HKV-Q nrPDB Length = 91 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 7/49 (14%) Query: 244 RDLIRQGIL--KNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFN 290 RD++++ ++ K+ ED+ F+ V+T +N TQ+ ++E+IFN Sbjct: 4 RDILKRPVITEKSSEAMAEDKYTFD-----VDTRVNKTQVKMAVEEIFN 47 >3F8M-A nrPDB Length = 248 Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust. Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 166 IKEHPVIESHPDNALEDLRLDKPFPELREHFQSYDL 201 I +H V+ + D L+ +R+ PFP RE + +++ Sbjct: 13 ILKHQVVRAELDRMLDGMRIGDPFPAEREIAEQFEV 48 >4UTP-A nrPDB Length = 314 Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 261 DEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQ 320 +EE E IK + L T++PS + DDR + Q + I A+ + +A++G+ Sbjct: 228 EEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGK 287 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1TT5-A nrPDB 922 0.0 4P22-A nrPDB 255 3e-68 6CWZ-C nrPDB 204 6e-53 3KYD-B nrPDB 186 2e-47 3KYC-B nrPDB 184 1e-46 1YOV-B nrPDB 147 1e-35 2NVU-B nrPDB 147 1e-35 1JWB-B nrPDB 139 3e-33 4RDI-A nrPDB 138 6e-33 3H5A-A nrPDB 123 2e-28 5FF5-A nrPDB 106 3e-23 Sequences not found previously or not previously below threshold: 1ZFN-A nrPDB 113 2e-25 2LZJ-A nrPDB 75 6e-14 3T7E-A nrPDB 74 1e-13 3VH2-A nrPDB 74 1e-13 5IAA-A nrPDB 54 2e-07 4K28-A nrPDB 39 0.006 5ILO-A nrPDB 34 0.14 2D0I-A nrPDB 34 0.19 5CWW-B nrPDB 33 0.39 4YZP-A nrPDB 32 0.89 1PJ5-A nrPDB 31 1.1 4UTP-A nrPDB 31 1.7 3ZK8-A nrPDB 30 2.1 4R1T-A nrPDB 30 2.1 2O2Z-A nrPDB 30 2.9 4QUK-A nrPDB 29 3.9 2HAE-A nrPDB 29 5.0 1R52-A nrPDB 29 5.3 5ER0-A nrPDB 29 5.6 3IHP-A nrPDB 29 5.8 5HKV-Q nrPDB 29 6.2 2G03-A nrPDB 29 7.0 >1TT5-A nrPDB Length = 531 Score = 922 bits (2383), Expect = 0.0, Method: Composition-based stats. Identities = 529/534 (99%), Positives = 529/534 (99%), Gaps = 5/534 (0%) Query: 1 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 60 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII Sbjct: 3 MAQLGKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTII 62 Query: 61 DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFF 120 DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFF Sbjct: 63 DGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFF 122 Query: 121 CRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNAL 180 CRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNAL Sbjct: 123 CRFTVVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNAL 182 Query: 181 EDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK 240 EDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK Sbjct: 183 EDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK 242 Query: 241 EDFRDLIRQGILKNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQ 300 EDFRDLIRQGILK PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQ Sbjct: 243 EDFRDLIRQGILK-----PEDEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQ 297 Query: 301 TPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNH 360 TPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNH Sbjct: 298 TPSFWILARALKEFVAKEGQGNLPVRGTIPDMIADSGKYIKLQNVYREKAKKDAAAVGNH 357 Query: 361 VAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPD 420 VAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPD Sbjct: 358 VAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPD 417 Query: 421 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 480 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH Sbjct: 418 NEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVH 477 Query: 481 EFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 534 EFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL Sbjct: 478 EFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGMSQTSATFQL 531 >4P22-A nrPDB Length = 446 Score = 255 bits (652), Expect = 3e-68, Method: Composition-based stats. Identities = 71/265 (26%), Positives = 103/265 (38%), Gaps = 42/265 (15%) Query: 8 LKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSG 67 + E Y RQL + G + L+++ V + G EI KN++L G+ + T+ D Sbjct: 57 IDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNIILGGVKAVTLHDQGTAQW 116 Query: 68 EDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVV 127 D + F+L+ IGKNRAE + L ELNS V + F F VVV Sbjct: 117 ADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVTAYTGPLV------EDFLSGFQVVV 170 Query: 128 ATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIES----HPDNALEDL 183 T P LR+ + N I L++ T GL G + E ++ P +A+ + Sbjct: 171 LTNTPLEDQLRVGEFCHNRGIKLVVADTRGLFGQLFCDFGEEMILTDSNGEQPLSAMVSM 230 Query: 184 RL-DKP-----FPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTY 237 D P E R F+S D + Q E NG P Sbjct: 231 VTKDNPGVVTCLDEARHGFESGDFVSFSE----------------VQGMVELNGNQPMEI 274 Query: 238 K----------EKEDFRDLIRQGIL 252 K + +F D IR GI+ Sbjct: 275 KVLGPYTFSICDTSNFSDYIRGGIV 299 Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 68/157 (43%), Gaps = 18/157 (11%) Query: 383 LCSNSAFLRVVRCRSLAEEYGLDTINKDEIISSMDNPDNEIV----------LYLMLRAV 432 +C S F +R +++ I+ +++S+ PD + L++ +A+ Sbjct: 284 ICDTSNFSDYIRGGIVSQVKVPKKISFKSLVASLAEPDFVVTDFAKFSRPAQLHIGFQAL 343 Query: 433 DRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDYVHEFCR----YGAA 488 +F Q GR P N +ED +L + L + L + +++ + R A Sbjct: 344 HQFCAQHGRPPRPRN---DEDAAELVA-LAQAVNARALPAVQQNNLDEDLIRKLAYVAAG 399 Query: 489 EPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGM 525 + I AF+GG AAQEV+K + +F+ + + Sbjct: 400 DLAPINAFIGGLAAQEVMKACSGKFMPIMQWLYFDAL 436 >6CWZ-C nrPDB Length = 346 Score = 204 bits (520), Expect = 6e-53, Method: Composition-based stats. Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 3/199 (1%) Query: 9 KEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGE 68 + +YDRQ+RLWG Q+ L ++ V L+ G EI KNL+L G+ T++D QV+ E Sbjct: 15 EAAQYDRQIRLWGLEAQKRLRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQVTPE 74 Query: 69 DAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVA 128 D G F ++ S+G+NRAEA++E Q LN V V+ E++ SFF +F V Sbjct: 75 DPGAQFLIRTGSVGRNRAEASLERAQNLNPMVD---VKVDTEDIEKKPESFFTQFDAVCL 131 Query: 129 TQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHPVIESHPDNALEDLRLDKP 188 T +++ + + I +G GY + EH +E A ++ Sbjct: 132 TCCSRDVIVKVDQICHKNSIKFFTGDVFGYHGYTFANLGEHEFVEEKTKVAKVSQGVEDG 191 Query: 189 FPELREHFQSYDLDHMEKK 207 R S + ++KK Sbjct: 192 PDTKRAKLDSSETTMVKKK 210 Score = 152 bits (383), Expect = 4e-37, Method: Composition-based stats. Identities = 44/167 (26%), Positives = 79/167 (47%), Gaps = 15/167 (8%) Query: 361 VAKLLQSIGQAPESISEKELKLLCSNSAFLR--VVRCRSLAEEYGLDTINKDEIISSMDN 418 VAK+ Q + P++ K KL S + ++ VV C + E +D + ++ +++ Sbjct: 181 VAKVSQGVEDGPDT---KRAKLDSSETTMVKKKVVFC-PVKEALEVDW-SSEKAKAALKR 235 Query: 419 PDNEIVLYLMLRAVDRFHKQQGRYPGVSNYQVEEDIGKLKSCLTGFLQEYGLSVMVKDDY 478 ++ Y +L+ + +F +GR P Y EED L L G+S D Sbjct: 236 TTSD---YFLLQVLLKFRTDKGRDPSSDTY--EEDSELLLQIRNDVLDSLGIS---PDLL 287 Query: 479 VHEFCRYGAAEPHTIAAFLGGAAAQEVIKIITKQFVIFNNTYIYSGM 525 +F RY +E + A +GG AQE++K ++++ NN + + GM Sbjct: 288 PEDFVRYCFSEMAPVCAVVGGILAQEIVKALSQRDPPHNNFFFFDGM 334 >3KYD-B nrPDB Length = 551 Score = 186 bits (472), Expect = 2e-47, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%) Query: 26 EALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 85 EA+ V ++ A G E+LKNLVL G +ID + + + F Q+ +G+++ Sbjct: 15 EAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSK 74 Query: 86 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWN 145 A+ A E + + + +S N D + FF +F +V+ + + + Sbjct: 75 AQVAKESVLQFYPKANIVAYHDSIMN-PDYNVEFFRQFILVMNALDNRAARNHVNRMCLA 133 Query: 146 SQIPLLICRTYGLVGYMRIIIKE-HPVIESHP 176 + +PL+ T G +G + I K E HP Sbjct: 134 ADVPLIESGTAGYLGQVTTIKKGVTECYECHP 165 >3KYC-B nrPDB Length = 660 Score = 184 bits (466), Expect = 1e-46, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 68/152 (44%), Gaps = 2/152 (1%) Query: 26 EALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 85 EA+ V ++ A G E+LKNLVL G +ID + + + F Q+ +G+++ Sbjct: 33 EAVAGGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSK 92 Query: 86 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLWN 145 A+ A E + + + +S N D + FF +F +V+ + + + Sbjct: 93 AQVAKESVLQFYPKANIVAYHDSIMN-PDYNVEFFRQFILVMNALDNRAARNHVNRMCLA 151 Query: 146 SQIPLLICRTYGLVGYMRIIIKE-HPVIESHP 176 + +PL+ T G +G + I K E HP Sbjct: 152 ADVPLIESGTAGYLGQVTTIKKGVTECYECHP 183 >1YOV-B nrPDB Length = 444 Score = 147 bits (371), Expect = 1e-35, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 20/188 (10%) Query: 25 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 84 Q L++ V +I A G E+LKNL L G +ID + + + F + IG+ Sbjct: 45 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 104 Query: 85 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLW 144 +AE A EFL N V V + D + +F+ +F ++V + +L Sbjct: 105 KAEVAAEFL---NDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI 161 Query: 145 ------------NSQIPLLICRTYGLVGYMRIII-KEHPVIES----HPDNALEDLRLDK 187 +S +PL+ T G G R+I+ IE +P + Sbjct: 162 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA 221 Query: 188 PFPELREH 195 P L EH Sbjct: 222 SMPRLPEH 229 >2NVU-B nrPDB Length = 805 Score = 147 bits (370), Expect = 1e-35, Method: Composition-based stats. Identities = 47/188 (25%), Positives = 74/188 (39%), Gaps = 20/188 (10%) Query: 25 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKN 84 Q L++ V +I A G E+LKNL L G +ID + + + F + IG+ Sbjct: 406 QFLLDTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRP 465 Query: 85 RAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPESTSLRLADVLW 144 +AE A EFL N V V + D + +F+ +F ++V + +L Sbjct: 466 KAEVAAEFL---NDRVPNCNVVPHFNKIQDFNDTFYRQFHIIVCGLDSIIARRWINGMLI 522 Query: 145 ------------NSQIPLLICRTYGLVGYMRIII-KEHPVIES----HPDNALEDLRLDK 187 +S +PL+ T G G R+I+ IE +P + Sbjct: 523 SLLNYEDGVLDPSSIVPLIDGGTEGFKGNARVILPGMTACIECTLELYPPQVNFPMCTIA 582 Query: 188 PFPELREH 195 P L EH Sbjct: 583 SMPRLPEH 590 >1JWB-B nrPDB Length = 249 Score = 139 bits (350), Expect = 3e-33, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 71/170 (41%), Gaps = 12/170 (7%) Query: 12 KYDRQLRLWGDH--GQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 +Y+RQ+ L G GQEAL+ + V ++ G + L G+G+ T++D + VS + Sbjct: 11 RYNRQIILRGFDFDGQEALKDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSN 70 Query: 70 AGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPS---FFCRFTVV 126 +++G+ + E+A + L +N ++ +P N L +D +V Sbjct: 71 LQRQTLHSDATVGQPKVESARDALTRINPHIAI-----TPVNALLDDAELAALIAEHDLV 125 Query: 127 VATQLPESTSLRLADVLWNSQIPLLICRTYGLVGY--MRIIIKEHPVIES 174 + + +L + +++PL+ + G + P Sbjct: 126 LDCTDNVAVRNQLNAGCFAAKVPLVSGAAIRMEGQITVFTYQDGEPCYRC 175 >4RDI-A nrPDB Length = 288 Score = 138 bits (348), Expect = 6e-33, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 5/150 (3%) Query: 10 EQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 Q++ RL+G+ + AH+C++ G+ + L GIG+ T+ID + V + Sbjct: 30 RQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLIDMDDVCVTN 89 Query: 70 AGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEE--SPENLLDNDPSFFCRFTVVV 127 R ++G +AE E ++++N + + V++ +P+N+ ++ V+ Sbjct: 90 TNRQIHALRDNVGLAKAEVMAERIRQINPECRVTVVDDFVTPDNVAQYMSV---GYSYVI 146 Query: 128 ATQLPESTSLRLADVLWNSQIPLLICRTYG 157 L ++IPL+ G Sbjct: 147 DAIDSVRPKAALIAYCRRNKIPLVTTGGAG 176 >3H5A-A nrPDB Length = 358 Score = 123 bits (308), Expect = 2e-28, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 62/176 (35%), Gaps = 11/176 (6%) Query: 9 KEQKYDRQLRLWGDHG------QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDG 62 + +Y R + +G Q+ L++A V ++ G + L GIG +ID Sbjct: 88 ENNRYSRNFLHYQSYGANPVLVQDKLKNAKVVILGCGGIGNHVSVILATSGIGEIILIDN 147 Query: 63 NQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCR 122 +Q+ + +GKN+ E L + NS++S S + + + D Sbjct: 148 DQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSEISVSEIALNINDYTDLHKVPEAD 207 Query: 123 FTVVVATQLPESTSLRLADVLWNSQIPLLICRTY---GLVGYMRIIIKEHPVIESH 175 VV+ P + + + P + + G + + + E Sbjct: 208 -IWVVSADHPFNLINWVNKYCVRANQPYINAGYVNDIAVFGPLY-VPGKTGCYECQ 261 >1ZFN-A nrPDB Length = 253 Score = 113 bits (282), Expect = 2e-25, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 63/172 (36%), Gaps = 7/172 (4%) Query: 12 KYDRQLRL--WGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 +Y RQ+ L GQ+ L + V +I GT L G+G+ + D + V + Sbjct: 10 RYSRQILLDDIALDGQQKLLDSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSN 69 Query: 70 AGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVAT 129 I + +++ + + L +LN D+ + +++ D R VV+ Sbjct: 70 LQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRLTGEALKDA--VARADVVLDC 127 Query: 130 QLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIK--EHPVIES-HPDN 178 +T + PL+ G G + ++ E PDN Sbjct: 128 TDNMATRQEINAACVALNTPLITASAVGFGGQLMVLTPPWEQGCYRCLWPDN 179 >5FF5-A nrPDB Length = 381 Score = 106 bits (264), Expect = 3e-23, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 9/103 (8%) Query: 9 KEQKYDRQLRLWG---------DHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTI 59 + ++Y+RQ+ + QE L+ + V + GT L + GIG+ + Sbjct: 102 EVERYNRQILQFSLIDADNQHPFVYQERLKQSKVAIFGMGGWGTWCALQLAMSGIGTLRL 161 Query: 60 IDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNSDVSG 102 IDG+ V + + +GKN+ +AA + + N +V Sbjct: 162 IDGDDVELSNINRQVLYRTDDVGKNKVDAAKDTILAYNENVHV 204 >2LZJ-A nrPDB Length = 112 Score = 75.5 bits (184), Expect = 6e-14, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 36/107 (33%) Query: 166 IKEHPVIES----HPDNALEDLRL-DKP-----FPELREHFQSYDLDHMEKKDHSHTPWI 215 E V+ P +A+ + D P E R F++ D + Sbjct: 2 FGEEMVLTDSNGEQPLSAMVSMVTKDNPGVVTCLDEARHGFETGDFVSFSE--------- 52 Query: 216 VIIAKYLAQWYSETNGRIPKTYK----------EKEDFRDLIRQGIL 252 Q + NG P K + +F D IR GI+ Sbjct: 53 -------VQGMIQLNGCQPMEIKVLGPYTFSICDTSNFSDYIRGGIV 92 >3T7E-A nrPDB Length = 344 Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 22/196 (11%) Query: 18 RLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQ 77 R+ D + +++ V L+ A G + + L+ G+ T +D VS + Sbjct: 26 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 85 Query: 78 RSSIGKNRAEAAMEFLQELNSDVSGSFV-------------EESPENLLDNDPSFFCRFT 124 GK +AE A L+ + + + V EE+ D + Sbjct: 86 FEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD 145 Query: 125 VVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHP--------VIESHP 176 ++ + L +L N + +I G Y+ + H Sbjct: 146 IIFLLVDSRESRW-LPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSSKQLGCYFCHD 204 Query: 177 DNALEDLRLDKPFPEL 192 A D D+ ++ Sbjct: 205 VVAPTDSLTDRTLDQM 220 >3VH2-A nrPDB Length = 616 Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats. Identities = 32/196 (16%), Positives = 62/196 (31%), Gaps = 22/196 (11%) Query: 18 RLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQ 77 R+ D + +++ V L+ A G + + L+ G+ T +D VS + Sbjct: 315 RILPDLNLDIIKNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYN 374 Query: 78 RSSIGKNRAEAAMEFLQELNSDVSGSFV-------------EESPENLLDNDPSFFCRFT 124 GK +AE A L+ + + + V EE+ D + Sbjct: 375 FEDCGKPKAELAAASLKRIFPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHD 434 Query: 125 VVVATQLPESTSLRLADVLWNSQIPLLICRTYGLVGYMRIIIKEHP--------VIESHP 176 ++ + L +L N + +I G Y+ + H Sbjct: 435 IIFLLVDSRESRW-LPSLLSNIENKTVINAALGFDSYLVMRHGNRDEQSSKQLGCYFCHD 493 Query: 177 DNALEDLRLDKPFPEL 192 A D D+ ++ Sbjct: 494 VVAPTDSLTDRTLDQM 509 >5IAA-A nrPDB Length = 290 Score = 53.9 bits (128), Expect = 2e-07, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 56/165 (33%), Gaps = 16/165 (9%) Query: 26 EALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNR 85 E + + V ++ G+ + L GIG + D ++V + F Q G ++ Sbjct: 13 EKIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNR-LFFQPHQAGLSK 71 Query: 86 AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRF-----------TVVVATQLPES 134 +AA L+ +N DV V ++N F R +V++ Sbjct: 72 VQAAEHTLRNINPDV-LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFE 130 Query: 135 TSLRLADVLWNSQIPLLICRTY--GLVGYMRIII-KEHPVIESHP 176 + + + + G++++II E P Sbjct: 131 ARMTINTACNELGQTWMESGVSENAVSGHIQLIIPGESACFACAP 175 >4K28-A nrPDB Length = 269 Score = 38.9 bits (89), Expect = 0.006, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 18/61 (29%) Query: 5 GKLLKEQKYDRQLRLWGDHGQEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQ 64 G+LL + +I G+ I L GI S T+ D + Sbjct: 100 GRLLGDNVDGAGFLGAAHKHGFEPAGKRALVIGCGGVGSAIAYALAEAGIASITLCDPST 159 Query: 65 V 65 Sbjct: 160 A 160 >5ILO-A nrPDB Length = 271 Score = 34.3 bits (77), Expect = 0.14, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 32/108 (29%), Gaps = 8/108 (7%) Query: 33 VCLINATATGTEILKNLVLPGIGSFTIIDGNQ-------VSGEDAGNNFFLQRSSIGKNR 85 V A G ++ K L+ G IID + + + + + + Sbjct: 19 VVTGGAGGIGLQVSKQLLAAGAAKVAIIDLQDNLEEFVKLRAAHPTQSVMIIKMDVANKK 78 Query: 86 -AEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLP 132 EA E + + ++ N D + ++ + L Sbjct: 79 GVEATYEEIAKTFGNIDIVVNVAGIFNDKDVQRTLLVNLGGIINSTLS 126 >2D0I-A nrPDB Length = 333 Score = 33.9 bits (76), Expect = 0.19, Method: Composition-based stats. Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%) Query: 6 KLLKEQKYDRQLRLW-GDHGQEALESAHVCLINATATGTEILKNLVLPGIG 55 K ++ +++ ++W G E+L V ++ A G I + L+ G+ Sbjct: 121 KFIRRGEWESHAKIWTGFKRIESLYGKKVGILGMGAIGKAIARRLIPFGVK 171 >5CWW-B nrPDB Length = 595 Score = 32.7 bits (73), Expect = 0.39, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 12/83 (14%) Query: 202 DHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIPKTYKEK------EDFRDLIRQGILKNE 255 + + TP ++A+ +W SE + + PK +E E + R G++ Sbjct: 310 VAAAEDNPESTPEERLVAQQQLEWMSEIDNQEPKLVEEATGEATIEVYTRPSRPGLVPKL 369 Query: 256 NGA------PEDEENFEEAIKNV 272 G PEDE++ E +K++ Sbjct: 370 QGPFDFDLNPEDEQDDEVELKDI 392 >4YZP-A nrPDB Length = 536 Score = 31.6 bits (70), Expect = 0.89, Method: Composition-based stats. Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 15/135 (11%) Query: 341 KLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKELKLLCSNSAFLRVVRC----- 395 KL V+++ A++ N +LL I P +S ++ LL N L ++R Sbjct: 136 KLGKVWKQIAER----FKNKSERLLFEIVNEPTGMSAYQMNLL--NREMLNIIRSTGGKN 189 Query: 396 -RSLAEEYGLDTINKDEIISSMDNPDNE--IVLYLMLRAVDRFHKQQGRYPGVSNYQVEE 452 + L GL+ NKDE++ S + PD++ ++ Y D GR S ++ E Sbjct: 190 GQRLVIVGGLED-NKDELLHSFEPPDDDRIVLTYHYYSPWDYVSNWWGRTTWGSAAEISE 248 Query: 453 DIGKLKSCLTGFLQE 467 +K F++E Sbjct: 249 MEEDIKPVYEKFVRE 263 >1PJ5-A nrPDB Length = 830 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%) Query: 30 SAHVCLINATATGTEILKNLVLPGIGSFTIIDGN 63 + + +I A GT + LV G + T++D Sbjct: 4 TPRIVIIGAGIVGTNLADELVTRGWNNITVLDQG 37 >4UTP-A nrPDB Length = 314 Score = 30.8 bits (68), Expect = 1.7, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 261 DEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQ 320 +EE E IK + L T++PS + DDR + Q + I A+ + +A++G+ Sbjct: 228 EEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGK 287 >3ZK8-A nrPDB Length = 278 Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 261 DEENFEEAIKNVNTALNTTQIPSSIEDIFNDDRCINITKQTPSFWILARALKEFVAKEGQ 320 +EE E IK + L T++PS + DDR + Q + I A+ + +A++G+ Sbjct: 197 EEEGTPEQIKTLVEKLRQTKVPSLFVESSVDDRPMKTVSQDTNIPIYAQIFTDSIAEQGK 256 >4R1T-A nrPDB Length = 337 Score = 30.4 bits (67), Expect = 2.1, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 42/135 (31%), Gaps = 14/135 (10%) Query: 21 GDHGQEALESAHVCLINATA-TGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRS 79 G HG ++ VC+ A + ++K L+ G V D N L+ Sbjct: 1 GSHGMRSVSGQVVCVTGAGGFIASWLVKILLEKGYTV-----RGTVRNPDDPKNGHLREL 55 Query: 80 SIGKNRAEAAMEFLQELNSD------VSGSFVEESPENLLDNDPSFFCRFTVVVATQLPE 133 K R L + S G F SP + D+ + + Sbjct: 56 EGAKERLTLCKADLLDYQSLREAINGCDGVFHTASP--VTDDPEQMVEPAVIGTKNVINA 113 Query: 134 STSLRLADVLWNSQI 148 + + V++ S I Sbjct: 114 AAEANVRRVVFTSSI 128 >2O2Z-A nrPDB Length = 323 Score = 30.0 bits (66), Expect = 2.9, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 8/86 (9%) Query: 23 HGQEALESAHVCLINATATGTEILKNLVLPGI-GSFTIIDGNQVSGEDAGNNFFLQRSSI 81 G EA+ A V +I + T +L NL++PGI + +V + Sbjct: 171 EGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNVMTQN------- 223 Query: 82 GKNRAEAAMEFLQELNSDVSGSFVEE 107 G+ A + LQ + V++ Sbjct: 224 GETDGYTASDHLQAIMDHCGVGIVDD 249 >4QUK-A nrPDB Length = 319 Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%) Query: 329 IPDMIADSGKYIKLQNVYREKAKKDAAAVGNHVAKLLQSIGQAPESISEKEL 380 +P+ AD Y+ + V +EKAK ++G L SI + ES+ EK+ Sbjct: 269 LPEKCADDKPYVPIYQVSKEKAK----SLGLEYTPLEVSIKETVESLKEKKF 316 >2HAE-A nrPDB Length = 386 Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 21/45 (46%) Query: 25 QEALESAHVCLINATATGTEILKNLVLPGIGSFTIIDGNQVSGED 69 ++ +E V + A G I+K L+ G+ + +D + E+ Sbjct: 177 EKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNEN 221 >1R52-A nrPDB Length = 382 Score = 28.9 bits (63), Expect = 5.3, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 21/58 (36%) Query: 78 RSSIGKNRAEAAMEFLQELNSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQLPEST 135 R +IG+ + A E NS+V + N SF F ++ T E Sbjct: 127 RETIGRVASGAIAEKFLAQNSNVEIVAFVTQIGEIKMNRDSFDPEFQHLLNTITREKV 184 >5ER0-A nrPDB Length = 518 Score = 28.9 bits (63), Expect = 5.6, Method: Composition-based stats. Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 5/43 (11%) Query: 23 HGQEALESA----HVCLINATATGTEILKNLVLPGIGSFTIID 61 H Q +E A + +I A G E+ + G T+ID Sbjct: 186 HAQALIEDAKEAKRITVIGAGYIGAELAEAYSTTG-HDVTLID 227 >3IHP-A nrPDB Length = 854 Score = 28.9 bits (63), Expect = 5.8, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 19/34 (55%) Query: 405 DTINKDEIISSMDNPDNEIVLYLMLRAVDRFHKQ 438 D ++KDE S D P++E LY+ + F KQ Sbjct: 42 DRVHKDECAFSFDTPESEGGLYICMNTFLGFGKQ 75 >5HKV-Q nrPDB Length = 91 Score = 28.9 bits (63), Expect = 6.2, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 7/49 (14%) Query: 244 RDLIRQGIL--KNENGAPEDEENFEEAIKNVNTALNTTQIPSSIEDIFN 290 RD++++ ++ K+ ED+ F+ V+T +N TQ+ ++E+IFN Sbjct: 4 RDILKRPVITEKSSEAMAEDKYTFD-----VDTRVNKTQVKMAVEEIFN 47 >2G03-A nrPDB Length = 194 Score = 28.5 bits (62), Expect = 7.0, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 39/99 (39%), Gaps = 10/99 (10%) Query: 175 HPDNALEDLRLDKPFPELREHFQSYDLDHMEKKDHSHTPWIVIIAKYLAQWYSETNGRIP 234 +P ++ R F+S D+D +E T + I +YL + G+I Sbjct: 8 NPIGKTMKSIDEQSLHNARRLFESGDIDRIE---VGTTAGLQQIHRYLFGGLYDFAGQIR 64 Query: 235 KTYKEKEDFR----DLIRQGILKNENGAPEDEENFEEAI 269 + K FR +++ ++K E E FEE I Sbjct: 65 EDNISKGGFRFANAMYLKEALVKIEQMP---ERTFEEII 100 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.133 0.357 Lambda K H 0.267 0.0406 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,402,414 Number of Sequences: 36641 Number of extensions: 847136 Number of successful extensions: 2487 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 24 Number of HSP's that attempted gapping in prelim test: 2416 Number of HSP's gapped (non-prelim): 73 length of query: 534 length of database: 10,336,785 effective HSP length: 102 effective length of query: 432 effective length of database: 6,599,403 effective search space: 2850942096 effective search space used: 2850942096 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 61 (28.1 bits)