BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q13526 (163 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4U85-A nrPDB 335 6e-93 1ZCN-A nrPDB 328 7e-91 4TNS-A nrPDB 246 3e-66 3JYJ-A nrPDB 243 3e-65 1YW5-A nrPDB 144 2e-35 1J6Y-A nrPDB 120 2e-28 2LJ4-A nrPDB 99 7e-22 2MNT-A nrPDB 83 5e-17 2M08-A nrPDB 74 4e-14 4WO7-A nrPDB 71 2e-13 1ZK6-A nrPDB 68 2e-12 2M1I-A nrPDB 68 2e-12 3RFW-A nrPDB 59 1e-09 1JNS-A nrPDB 57 5e-09 1FJD-A nrPDB 55 2e-08 2JZV-A nrPDB 47 3e-06 5XMC-A nrPDB 46 6e-06 1M5Y-A nrPDB 45 2e-05 6BHF-A nrPDB 44 4e-05 5EZ1-A nrPDB 44 4e-05 4G2P-A nrPDB 43 6e-05 5HTF-A nrPDB 40 4e-04 5TJ8-A nrPDB 37 0.003 3OLM-A nrPDB 36 0.006 3GPK-A nrPDB 36 0.009 1O6W-A nrPDB 33 0.041 2YSE-A nrPDB 33 0.068 6AHD-X nrPDB 32 0.15 2JXW-A nrPDB 31 0.27 5L3D-A nrPDB 30 0.49 3ABT-A nrPDB 30 0.52 2L5F-A nrPDB 28 1.2 6BVE-A nrPDB 28 2.0 2FIQ-A nrPDB 28 2.4 4XYW-A nrPDB 27 5.9 6BT9-A nrPDB 26 7.2 3MOQ-A nrPDB 26 8.1 >4U85-A nrPDB Length = 181 Score = 335 bits (858), Expect = 6e-93, Method: Compositional matrix adjust. Identities = 162/163 (99%), Positives = 162/163 (99%) Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 60 MADEEKLPPGWEK MSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL Sbjct: 19 MADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 78 Query: 61 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 120 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG Sbjct: 79 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 138 Query: 121 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE Sbjct: 139 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 181 >1ZCN-A nrPDB Length = 161 Score = 328 bits (841), Expect = 7e-91, Method: Compositional matrix adjust. Identities = 160/163 (98%), Positives = 161/163 (98%), Gaps = 2/163 (1%) Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 60 MADEEKLPPGWEKRMS +GRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL Sbjct: 1 MADEEKLPPGWEKRMS--NGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 58 Query: 61 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 120 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG Sbjct: 59 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 118 Query: 121 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE Sbjct: 119 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 161 >4TNS-A nrPDB Length = 151 Score = 246 bits (628), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 119/121 (98%), Positives = 121/121 (100%) Query: 43 SGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEED 102 SGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQE+ITRT+EEALELINGYIQKIKSGEED Sbjct: 31 SGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEED 90 Query: 103 FESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 FESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT Sbjct: 91 FESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 150 Query: 163 E 163 E Sbjct: 151 E 151 >3JYJ-A nrPDB Length = 123 Score = 243 bits (619), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 117/119 (98%), Positives = 119/119 (100%) Query: 45 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFE 104 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQE+ITRT+EEALELINGYIQKIKSGEEDFE Sbjct: 5 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFE 64 Query: 105 SLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 SLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE Sbjct: 65 SLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 123 >1YW5-A nrPDB Length = 177 Score = 144 bits (363), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 73/169 (43%), Positives = 107/169 (63%), Gaps = 13/169 (7%) Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNS------------SSGGKNGQGEPAR 54 LPP W R+SRS + Y+ N TN S W+ P G ++G K E + Sbjct: 8 LPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYGTDKEVLNAYIAKFKNNGYKPLVNEDGQ 67 Query: 55 VRCSHLLVKHSQSRRPSSWRQ-EKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDC 113 VR SHLL+K++QSR+P SW+ + I+RT++E+++++ ++++I SGE LA+ SDC Sbjct: 68 VRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDC 127 Query: 114 SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 SS GDLG FS+GQMQ PFE+A+F L GE+S + T+SG+HI+ RT Sbjct: 128 SSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRT 176 >1J6Y-A nrPDB Length = 139 Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 109 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 26 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 85 Query: 110 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 86 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 138 >2LJ4-A nrPDB Length = 115 Score = 99.0 bits (245), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 57/110 (51%), Positives = 72/110 (65%), Gaps = 2/110 (1%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITR--TKEEALELINGYIQKIKSGEEDFESLASQFS 111 ++R +HLLVK S SR P S R T T E+A++ + + Q+I SGE FE ASQ S Sbjct: 4 KLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRS 63 Query: 112 DCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILR 161 DC S + GDLG FS G+M KPFEDA AL+ G++S V TDSG+HII R Sbjct: 64 DCGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHIIKR 113 >2MNT-A nrPDB Length = 120 Score = 83.2 bits (204), Expect = 5e-17, Method: Compositional matrix adjust. Identities = 44/113 (38%), Positives = 67/113 (59%), Gaps = 8/113 (7%) Query: 59 HLLVKHSQSRRPSSW----RQEKITRTKEEALELINGYIQKIKSGE----EDFESLASQF 110 H+LVKH RRPSS + EKITR++ +A+ L + + K + ++F + F Sbjct: 8 HVLVKHKDVRRPSSLAPRNKGEKITRSRADAINLAQAILAQHKERKTWSLDEFVQVVRDF 67 Query: 111 SDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 S+C SAK GDLG G + F+ +F+L++GE+S PV T+ G+H+I R E Sbjct: 68 SECGSAKRDGDLGMVESGTYTEGFDTVAFSLKSGEVSAPVETELGVHLIYRVE 120 >2M08-A nrPDB Length = 93 Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 23/113 (20%) Query: 50 GEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQ 109 G +++CSH+LV + EAL ++ +K+KSGE+ F LA + Sbjct: 1 GPSNKIKCSHILV-----------------SKQSEALAIM----EKLKSGEK-FGKLAKE 38 Query: 110 FS-DCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILR 161 S D SAK G+LG F++G M KPFEDA+F L+ GE+S P+ ++ G HII R Sbjct: 39 LSIDSGSAKKNGNLGYFTKGMMVKPFEDAAFKLQVGEVSEPIKSEFGYHIIKR 91 >4WO7-A nrPDB Length = 263 Score = 71.2 bits (173), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 46/116 (39%), Positives = 63/116 (54%), Gaps = 23/116 (19%) Query: 49 QGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLAS 108 +G ++R SH+LV +T EE +K+K GE+ FE LA Sbjct: 114 EGLKGKIRASHILVADK--------------KTAEEVE-------KKLKKGEK-FEDLAK 151 Query: 109 QFSDCSSAKARGDLGAFSR-GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 ++S SSA GDLG F++ GQM + F A+F L+TGE+S PV T G HII +TE Sbjct: 152 EYSTDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTE 207 >1ZK6-A nrPDB Length = 93 Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 45/111 (40%), Positives = 61/111 (54%), Gaps = 23/111 (20%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDC 113 ++R SH+LV +T EE +K+K GE+ FE LA ++S Sbjct: 4 KIRASHILVADK--------------KTAEEVE-------KKLKKGEK-FEDLAKEYSTD 41 Query: 114 SSAKARGDLGAFSR-GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 SSA GDLG F++ GQM + F A+F L+TGE+S PV T G HII +TE Sbjct: 42 SSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTE 92 >2M1I-A nrPDB Length = 97 Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 23/110 (20%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-D 112 +++CSH+LVK + EAL + +++K+GE+ F LA + S D Sbjct: 9 KIKCSHILVK-----------------KQGEALAVQ----ERLKAGEK-FGKLAKELSID 46 Query: 113 CSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 SAK G LG F RG+M KPFEDA+F L+ GE+S PV ++ G H+I R Sbjct: 47 GGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKRL 96 >3RFW-A nrPDB Length = 252 Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 26/161 (16%) Query: 9 PGWEKRMSRSSGRVY---YFNHITNASQWERPSGNS-SSGGKNGQGEPARVRCSHLLVKH 64 P + K + R+ + Y I N + + + K+ +PARV+ H+LV Sbjct: 63 PLYTKELDRAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILV-- 120 Query: 65 SQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEED--FESLASQFS-DCSSAKARGD 121 T++EA ++IN ++ +K E D F LA + S D S G+ Sbjct: 121 ---------------ATEKEAKDIINE-LKGLKGKELDAKFSELAKEKSIDPGSKNQGGE 164 Query: 122 LGAFSRGQMQKPFEDASFALRTGEM-SGPVFTDSGIHIILR 161 LG F + M KPF DA+FAL+ G + + PV T+ G H+IL+ Sbjct: 165 LGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILK 205 >1JNS-A nrPDB Length = 92 Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 44/79 (55%), Gaps = 3/79 (3%) Query: 81 TKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFA 140 KEE L L +++IK+G DF LA + S C S K GDLG F +GQM F+ F+ Sbjct: 11 VKEEKLAL--DLLEQIKNGA-DFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFS 67 Query: 141 LRTGEMSGPVFTDSGIHII 159 E +GP+ T G HII Sbjct: 68 CPVLEPTGPLHTQFGYHII 86 >1FJD-A nrPDB Length = 104 Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 32/74 (43%), Positives = 45/74 (60%), Gaps = 8/74 (10%) Query: 93 IQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFT 152 ++K+KSG F +A+Q+S+ A+ GDLG +RG M PF++A+FAL M PVFT Sbjct: 28 MEKLKSGMR-FNEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPVSGMDKPVFT 85 Query: 153 DS------GIHIIL 160 D G HII+ Sbjct: 86 DPPVKTKFGYHIIM 99 >2JZV-A nrPDB Length = 111 Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 56 RCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-DCS 114 + SH+L+K + +K + K E ++ +++ F +A + S D Sbjct: 9 KASHILIKVKSKKSDKEGLDDKEAKQKAEEIQ------KEVSKDPSKFGEIAKKESMDTG 62 Query: 115 SAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 SAK G+LG +GQ K FE A F L+ GE+S V + G HII Sbjct: 63 SAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHII 107 >5XMC-A nrPDB Length = 722 Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 20/31 (64%), Positives = 24/31 (77%), Gaps = 1/31 (3%) Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37 LPPGWEKR + S+GRVY+ NH T +QWE P Sbjct: 259 LPPGWEKR-TDSNGRVYFVNHNTRITQWEDP 288 Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 17/34 (50%), Positives = 25/34 (73%), Gaps = 1/34 (2%) Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPS 38 E LPPGWE+R+ + GR+YY +H T + W+RP+ Sbjct: 177 EPLPPGWERRVD-NMGRIYYVDHFTRTTTWQRPT 209 Score = 42.4 bits (98), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 16/31 (51%), Positives = 23/31 (74%), Gaps = 1/31 (3%) Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 37 LPPGWE+R+ + GRVYY +H+ + W+RP Sbjct: 147 LPPGWEQRVDQH-GRVYYVDHVEKRTTWDRP 176 >1M5Y-A nrPDB Length = 408 Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 36/106 (33%), Positives = 48/106 (45%), Gaps = 13/106 (12%) Query: 55 VRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-DC 113 V H+L+K PS ++ R K E + IKSG+ F + A +FS D Sbjct: 265 VHARHILLK------PSPIMTDEQARVKLEQIA------ADIKSGKTTFAAAAKEFSQDP 312 Query: 114 SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 SA GDLG + F DA L G+MS PV + G H+I Sbjct: 313 GSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 358 >6BHF-A nrPDB Length = 299 Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 5/87 (5%) Query: 78 ITRTKEEALELINGYIQKIKSGEE-DFESLASQFS-DCSSAKAR--GDLGAFSRGQMQKP 133 + +T++EA +I+ ++ K+ +E F LA++ + D +S A+ GDLG F + QM Sbjct: 163 LVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPD 222 Query: 134 FEDASFALRTGEMS-GPVFTDSGIHII 159 F A+FAL G+ + PV T+ G HII Sbjct: 223 FSKAAFALTPGDYTKTPVKTEFGYHII 249 >5EZ1-A nrPDB Length = 277 Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 5/87 (5%) Query: 78 ITRTKEEALELINGYIQKIKSGEE-DFESLASQFS-DCSSAKAR--GDLGAFSRGQMQKP 133 + +T++EA +I+ ++ K+ +E F LA++ + D +S A+ GDLG F + QM Sbjct: 133 LVKTEDEAKRIISEIDKQPKAKKEAKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPD 192 Query: 134 FEDASFALRTGEMS-GPVFTDSGIHII 159 F A+FAL G+ + PV T+ G HII Sbjct: 193 FSKAAFALTPGDYTKTPVKTEFGYHII 219 >4G2P-A nrPDB Length = 110 Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 13/106 (12%) Query: 55 VRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-DC 113 V H+L+K PS ++ R K E + IKSG+ F + A ++S D Sbjct: 9 VHARHILLK------PSPIMNDQQARLKLEEIA------ADIKSGKTTFAAAAKEYSQDP 56 Query: 114 SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 SA GDLG + F DA L G++S PV + G H+I Sbjct: 57 GSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 102 >5HTF-A nrPDB Length = 283 Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%) Query: 95 KIKSGEEDFESLASQFS-DCSSAKARGDLGAFSRGQMQKPFEDASFALRT-GEMSGPVFT 152 K+K+GE+ F LA ++S D +++ G L F G+M + FE A++AL ++SG V + Sbjct: 138 KLKNGEK-FTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKS 196 Query: 153 DSGIHII 159 G H+I Sbjct: 197 TYGYHLI 203 >5TJ8-A nrPDB Length = 447 Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust. Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%) Query: 9 PGWEKRMSRSSGRVYYFNHITNASQWERPSG 39 PGWEKR + GR YY +H T + W+RP+ Sbjct: 2 PGWEKR-TDPRGRFYYVDHNTRTTTWQRPTA 31 >3OLM-A nrPDB Length = 429 Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 23/36 (63%), Gaps = 1/36 (2%) Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSS 42 LP GWE R++ ++ RVY+ +H T + W+ P SS Sbjct: 9 LPSGWEMRLT-NTARVYFVDHNTKTTTWDDPRLPSS 43 >3GPK-A nrPDB Length = 112 Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Query: 93 IQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFT 152 ++++K G F + A Q+S+ S+A GDLG Q+ + ++ G+++GPV Sbjct: 33 VEQLKQGG-SFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASMGPGQLAGPVEI 91 Query: 153 DSGIHII 159 G I+ Sbjct: 92 RGGFSIL 98 >1O6W-A nrPDB Length = 75 Score = 33.5 bits (75), Expect = 0.041, Method: Compositional matrix adjust. Identities = 11/20 (55%), Positives = 16/20 (80%) Query: 18 SSGRVYYFNHITNASQWERP 37 +SGR+YY+N +T S WE+P Sbjct: 10 ASGRIYYYNTLTKKSTWEKP 29 Score = 25.8 bits (55), Expect = 8.5, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%) Query: 10 GWEKRMSRSSGRVYYFNHITNASQWERPS 38 GW K + G+VYY+N T + W P+ Sbjct: 44 GW-KAAKTADGKVYYYNPTTRETSWTIPA 71 >2YSE-A nrPDB Length = 60 Score = 32.7 bits (73), Expect = 0.068, Method: Compositional matrix adjust. Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37 + E +LP GWEK G +YY +HI +Q+E P Sbjct: 8 LDSELELPAGWEKIEDPVYG-IYYVDHINRKTQYENP 43 >6AHD-X nrPDB Length = 376 Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 16/22 (72%) Query: 18 SSGRVYYFNHITNASQWERPSG 39 S G YY++ I+ ASQWE+P G Sbjct: 134 SEGYHYYYDLISGASQWEKPEG 155 Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust. Identities = 9/18 (50%), Positives = 12/18 (66%) Query: 20 GRVYYFNHITNASQWERP 37 G YY+N T S+WE+P Sbjct: 177 GFTYYYNTETGESRWEKP 194 >2JXW-A nrPDB Length = 75 Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 16/22 (72%) Query: 18 SSGRVYYFNHITNASQWERPSG 39 S G YY++ I+ ASQWE+P G Sbjct: 13 SEGYHYYYDLISGASQWEKPEG 34 >5L3D-A nrPDB Length = 852 Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 63 KHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDL 122 KH + + W+ KI +T+EE EL+N K+ + +E + L Q+ + S K D+ Sbjct: 421 KHVKDEQIEHWK--KIVKTQEELKELLN----KMVNLKEKIKELHQQYKEASEVKPPRDI 474 Query: 123 GA 124 A Sbjct: 475 TA 476 >3ABT-A nrPDB Length = 662 Score = 30.0 bits (66), Expect = 0.52, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 6/62 (9%) Query: 63 KHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDL 122 KH + + W+ KI +T+EE EL+N K+ + +E + L Q+ + S K D+ Sbjct: 250 KHVKDEQIEHWK--KIVKTQEELKELLN----KMVNLKEKIKELHQQYKEASEVKPPRDI 303 Query: 123 GA 124 A Sbjct: 304 TA 305 >2L5F-A nrPDB Length = 92 Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust. Identities = 10/18 (55%), Positives = 12/18 (66%) Query: 20 GRVYYFNHITNASQWERP 37 GR YY+N T S WE+P Sbjct: 24 GRTYYYNTETKQSTWEKP 41 Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust. Identities = 10/25 (40%), Positives = 14/25 (56%) Query: 13 KRMSRSSGRVYYFNHITNASQWERP 37 K SG+ YY+N T S+W +P Sbjct: 58 KEYKSDSGKTYYYNSQTKESRWAKP 82 >6BVE-A nrPDB Length = 245 Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 3/85 (3%) Query: 77 KITRTKEEALELINGYIQKIKSGEEDFES-LASQFSDCSSAKARGDLGAFSRGQMQKPFE 135 K+ +T+ EA + G+ I+ E E L F+D S + G G +E Sbjct: 14 KMHKTQAEAQAFLQGFKPLIEDAAESREVVLCVPFTDLSGMSQQLHGGRVRLGAQNVHWE 73 Query: 136 DASFALRTGEMSGPVFTDSGIHIIL 160 AS A TGE+S + T+ GIH ++ Sbjct: 74 -ASGAY-TGEISAAMLTEIGIHYVV 96 >2FIQ-A nrPDB Length = 420 Score = 27.7 bits (60), Expect = 2.4, Method: Compositional matrix adjust. Identities = 8/25 (32%), Positives = 17/25 (68%) Query: 70 PSSWRQEKITRTKEEALELINGYIQ 94 P+ W+QE + E+++EL+ Y++ Sbjct: 91 PNCWQQENVDAAMEKSVELVKAYVR 115 >4XYW-A nrPDB Length = 338 Score = 26.6 bits (57), Expect = 5.9, Method: Compositional matrix adjust. Identities = 13/34 (38%), Positives = 17/34 (50%) Query: 92 YIQKIKSGEEDFESLASQFSDCSSAKARGDLGAF 125 Y I G E ESL QFS+C + G++ F Sbjct: 207 YSLHIVGGGERLESLKKQFSECENIHFLGEVNNF 240 >6BT9-A nrPDB Length = 672 Score = 26.2 bits (56), Expect = 7.2, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 6/47 (12%) Query: 11 WEKRMSRSSGRVYYFNHITNASQW--ERPSGNSSSGGKNGQGEPARV 55 W+ ++S + Y ITNA W E PSG S + G G G PA + Sbjct: 622 WDSKISSKTNNHYV---ITNAG-WNGEIPSGGSITIGGAGTGNPAEL 664 >3MOQ-A nrPDB Length = 126 Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust. Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 50 GEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDF 103 GE + C +L S + + W + K+ T E+++ + Y++ + G + F Sbjct: 15 GESLTINC--VLRDASFELKDTGWYRTKLGSTNEQSISIGGRYVETVNKGSKSF 66 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4U85-A nrPDB 253 2e-68 1ZCN-A nrPDB 246 3e-66 1YW5-A nrPDB 206 4e-54 4TNS-A nrPDB 186 3e-48 3JYJ-A nrPDB 181 9e-47 1J6Y-A nrPDB 142 6e-35 3RFW-A nrPDB 135 9e-33 2LJ4-A nrPDB 134 1e-32 2MNT-A nrPDB 124 2e-29 1M5Y-A nrPDB 114 2e-26 4G2P-A nrPDB 112 6e-26 2M08-A nrPDB 109 7e-25 2M1I-A nrPDB 106 4e-24 1JNS-A nrPDB 106 5e-24 4WO7-A nrPDB 99 6e-22 1ZK6-A nrPDB 93 5e-20 2JZV-A nrPDB 91 2e-19 6BHF-A nrPDB 91 2e-19 5EZ1-A nrPDB 89 1e-18 1FJD-A nrPDB 86 7e-18 5HTF-A nrPDB 75 1e-14 5XMC-A nrPDB 59 1e-09 Sequences not found previously or not previously below threshold: 2PV2-A nrPDB 52 1e-07 2PV3-A nrPDB 52 1e-07 3GPK-A nrPDB 52 1e-07 3OLM-A nrPDB 46 5e-06 2KGJ-A nrPDB 46 9e-06 5TJ8-A nrPDB 45 1e-05 5TVL-A nrPDB 34 0.028 1O6W-A nrPDB 31 0.31 1OZ7-A nrPDB 28 1.6 >4U85-A nrPDB Length = 181 Score = 253 bits (646), Expect = 2e-68, Method: Composition-based stats. Identities = 162/163 (99%), Positives = 162/163 (99%) Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 60 MADEEKLPPGWEK MSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL Sbjct: 19 MADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 78 Query: 61 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 120 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG Sbjct: 79 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 138 Query: 121 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE Sbjct: 139 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 181 >1ZCN-A nrPDB Length = 161 Score = 246 bits (627), Expect = 3e-66, Method: Composition-based stats. Identities = 160/163 (98%), Positives = 161/163 (98%), Gaps = 2/163 (1%) Query: 1 MADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 60 MADEEKLPPGWEKRM S+GRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL Sbjct: 1 MADEEKLPPGWEKRM--SNGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHL 58 Query: 61 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 120 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG Sbjct: 59 LVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARG 118 Query: 121 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE Sbjct: 119 DLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 161 >1YW5-A nrPDB Length = 177 Score = 206 bits (524), Expect = 4e-54, Method: Composition-based stats. Identities = 73/169 (43%), Positives = 107/169 (63%), Gaps = 13/169 (7%) Query: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNS------------SSGGKNGQGEPAR 54 LPP W R+SRS + Y+ N TN S W+ P G ++G K E + Sbjct: 8 LPPNWTIRVSRSHNKEYFLNQSTNESSWDPPYGTDKEVLNAYIAKFKNNGYKPLVNEDGQ 67 Query: 55 VRCSHLLVKHSQSRRPSSWRQ-EKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDC 113 VR SHLL+K++QSR+P SW+ + I+RT++E+++++ ++++I SGE LA+ SDC Sbjct: 68 VRVSHLLIKNNQSRKPKSWKSPDGISRTRDESIQILKKHLERILSGEVKLSELANTESDC 127 Query: 114 SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 SS GDLG FS+GQMQ PFE+A+F L GE+S + T+SG+HI+ RT Sbjct: 128 SSHDRGGDLGFFSKGQMQPPFEEAAFNLHVGEVSNIIETNSGVHILQRT 176 >4TNS-A nrPDB Length = 151 Score = 186 bits (472), Expect = 3e-48, Method: Composition-based stats. Identities = 119/121 (98%), Positives = 121/121 (100%) Query: 43 SGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEED 102 SGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQE+ITRT+EEALELINGYIQKIKSGEED Sbjct: 31 SGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEED 90 Query: 103 FESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 FESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT Sbjct: 91 FESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 150 Query: 163 E 163 E Sbjct: 151 E 151 >3JYJ-A nrPDB Length = 123 Score = 181 bits (460), Expect = 9e-47, Method: Composition-based stats. Identities = 117/119 (98%), Positives = 119/119 (100%) Query: 45 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFE 104 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQE+ITRT+EEALELINGYIQKIKSGEEDFE Sbjct: 5 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEQITRTQEEALELINGYIQKIKSGEEDFE 64 Query: 105 SLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 SLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE Sbjct: 65 SLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 123 >1J6Y-A nrPDB Length = 139 Score = 142 bits (358), Expect = 6e-35, Method: Composition-based stats. Identities = 58/113 (51%), Positives = 83/113 (73%), Gaps = 4/113 (3%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEK----ITRTKEEALELINGYIQKIKSGEEDFESLASQ 109 +V+ SH+L+KH SRR +SW+ + +T T+E A+E + + I SG+ +FE +A++ Sbjct: 26 QVKASHILIKHQGSRRKASWKDPEGKIILTTTREAAVEQLKSIREDIVSGKANFEEVATR 85 Query: 110 FSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 SDCSSAK GDLG+F RGQMQKPFE+A++AL+ G++S V TDSG+HII RT Sbjct: 86 VSDCSSAKRGGDLGSFGRGQMQKPFEEATYALKVGDISDIVDTDSGVHIIKRT 138 >3RFW-A nrPDB Length = 252 Score = 135 bits (339), Expect = 9e-33, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 26/161 (16%) Query: 9 PGWEKRMSRSSGRVY---YFNHITNASQWERPSGNS-SSGGKNGQGEPARVRCSHLLVKH 64 P + K + R+ + Y I N + + + K+ +PARV+ H+LV Sbjct: 63 PLYTKELDRAKDAILVNVYQEKILNTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILV-- 120 Query: 65 SQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEED--FESLASQFS-DCSSAKARGD 121 T++EA ++IN ++ +K E D F LA + S D S G+ Sbjct: 121 ---------------ATEKEAKDIINE-LKGLKGKELDAKFSELAKEKSIDPGSKNQGGE 164 Query: 122 LGAFSRGQMQKPFEDASFALRTGEM-SGPVFTDSGIHIILR 161 LG F + M KPF DA+FAL+ G + + PV T+ G H+IL+ Sbjct: 165 LGWFDQSTMVKPFTDAAFALKNGTITTTPVKTNFGYHVILK 205 >2LJ4-A nrPDB Length = 115 Score = 134 bits (338), Expect = 1e-32, Method: Composition-based stats. Identities = 57/111 (51%), Positives = 72/111 (64%), Gaps = 2/111 (1%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITR--TKEEALELINGYIQKIKSGEEDFESLASQFS 111 ++R +HLLVK S SR P S R T T E+A++ + + Q+I SGE FE ASQ S Sbjct: 4 KLRAAHLLVKFSGSRNPVSRRTGDSTADVTYEDAIKELQKWSQRIASGEVSFEEAASQRS 63 Query: 112 DCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 DC S + GDLG FS G+M KPFEDA AL+ G++S V TDSG+HII R Sbjct: 64 DCGSYASGGDLGFFSSGEMMKPFEDAVRALKIGDISPIVQTDSGLHIIKRL 114 >2MNT-A nrPDB Length = 120 Score = 124 bits (311), Expect = 2e-29, Method: Composition-based stats. Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 8/120 (6%) Query: 52 PARVRCSHLLVKHSQSRRPSSW----RQEKITRTKEEALELINGYIQKIKSGE----EDF 103 P H+LVKH RRPSS + EKITR++ +A+ L + + K + ++F Sbjct: 1 PTERHFYHVLVKHKDVRRPSSLAPRNKGEKITRSRADAINLAQAILAQHKERKTWSLDEF 60 Query: 104 ESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 + FS+C SAK GDLG G + F+ +F+L++GE+S PV T+ G+H+I R E Sbjct: 61 VQVVRDFSECGSAKRDGDLGMVESGTYTEGFDTVAFSLKSGEVSAPVETELGVHLIYRVE 120 >1M5Y-A nrPDB Length = 408 Score = 114 bits (284), Expect = 2e-26, Method: Composition-based stats. Identities = 37/116 (31%), Positives = 51/116 (43%), Gaps = 13/116 (11%) Query: 45 GKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFE 104 G++ V H+L+K PS ++ R K E + IKSG+ F Sbjct: 255 GESKNISVTEVHARHILLK------PSPIMTDEQARVKLEQIA------ADIKSGKTTFA 302 Query: 105 SLASQFS-DCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 + A +FS D SA GDLG + F DA L G+MS PV + G H+I Sbjct: 303 AAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLI 358 Score = 51.7 bits (122), Expect = 2e-07, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 11/136 (8%) Query: 26 NHITNASQWERPSGNSSSGGKNGQGE-PARVRCSHLLVKHSQSRRPSSWRQEKITRTKEE 84 N + S + Q + + SH+L+ + + E Sbjct: 124 NEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILI---------PLPENPTSDQVNE 174 Query: 85 ALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTG 144 A + + ++G DF LA S A G +G ++ F A + G Sbjct: 175 AESQARAIVDQARNGA-DFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKG 233 Query: 145 EMSGPVFTDSGIHIIL 160 ++ GP+ + G HI+ Sbjct: 234 DIVGPIRSGVGFHILK 249 >4G2P-A nrPDB Length = 110 Score = 112 bits (281), Expect = 6e-26, Method: Composition-based stats. Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 13/107 (12%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-D 112 V H+L+K PS ++ R K E + IKSG+ F + A ++S D Sbjct: 8 EVHARHILLK------PSPIMNDQQARLKLEEIA------ADIKSGKTTFAAAAKEYSQD 55 Query: 113 CSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHII 159 SA GDLG + F DA L G++S PV + G H+I Sbjct: 56 PGSANQGGDLGWATPDIFDPAFRDALTKLHKGQISAPVHSSFGWHLI 102 >2M08-A nrPDB Length = 93 Score = 109 bits (271), Expect = 7e-25, Method: Composition-based stats. Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 23/113 (20%) Query: 50 GEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQ 109 G +++CSH+LV + EAL + ++K+KSGE F LA + Sbjct: 1 GPSNKIKCSHILV-----------------SKQSEALAI----MEKLKSGE-KFGKLAKE 38 Query: 110 FS-DCSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILR 161 S D SAK G+LG F++G M KPFEDA+F L+ GE+S P+ ++ G HII R Sbjct: 39 LSIDSGSAKKNGNLGYFTKGMMVKPFEDAAFKLQVGEVSEPIKSEFGYHIIKR 91 >2M1I-A nrPDB Length = 97 Score = 106 bits (265), Expect = 4e-24, Method: Composition-based stats. Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 23/110 (20%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-D 112 +++CSH+LVK + EAL + +++K+GE F LA + S D Sbjct: 9 KIKCSHILVK-----------------KQGEALAVQ----ERLKAGE-KFGKLAKELSID 46 Query: 113 CSSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRT 162 SAK G LG F RG+M KPFEDA+F L+ GE+S PV ++ G H+I R Sbjct: 47 GGSAKRDGSLGYFGRGKMVKPFEDAAFRLQVGEVSEPVKSEFGYHVIKRL 96 >1JNS-A nrPDB Length = 92 Score = 106 bits (264), Expect = 5e-24, Method: Composition-based stats. Identities = 34/80 (42%), Positives = 44/80 (55%), Gaps = 3/80 (3%) Query: 81 TKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFA 140 KEE L L +++IK+G DF LA + S C S K GDLG F +GQM F+ F+ Sbjct: 11 VKEEKLAL--DLLEQIKNGA-DFGKLAKKHSICPSGKRGGDLGEFRQGQMVPAFDKVVFS 67 Query: 141 LRTGEMSGPVFTDSGIHIIL 160 E +GP+ T G HII Sbjct: 68 CPVLEPTGPLHTQFGYHIIK 87 >4WO7-A nrPDB Length = 263 Score = 99.5 bits (246), Expect = 6e-22, Method: Composition-based stats. Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 28/156 (17%) Query: 14 RMSRSSGRVYYFNHI-----TNASQWERPSGNSSSGGKNGQGEPARVRCSHLLVKHSQSR 68 + + G+ Y + T + + + + +G ++R SH+LV ++ Sbjct: 74 ALEKQYGKDYLKEQVKYELLTQKAAKDNIKVTDADIKEYWEGLKGKIRASHILVADKKT- 132 Query: 69 RPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSR- 127 +K+K GE FE LA ++S SSA GDLG F++ Sbjct: 133 --------------------AEEVEKKLKKGE-KFEDLAKEYSTDSSASKGGDLGWFAKE 171 Query: 128 GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 GQM + F A+F L+TGE+S PV T G HII +TE Sbjct: 172 GQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTE 207 >1ZK6-A nrPDB Length = 93 Score = 92.9 bits (229), Expect = 5e-20, Method: Composition-based stats. Identities = 42/113 (37%), Positives = 58/113 (51%), Gaps = 23/113 (20%) Query: 52 PARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS 111 ++R SH+LV ++ +K+K GE FE LA ++S Sbjct: 2 SGKIRASHILVADKKT---------------------AEEVEKKLKKGE-KFEDLAKEYS 39 Query: 112 DCSSAKARGDLGAFSR-GQMQKPFEDASFALRTGEMSGPVFTDSGIHIILRTE 163 SSA GDLG F++ GQM + F A+F L+TGE+S PV T G HII +TE Sbjct: 40 TDSSASKGGDLGWFAKEGQMDETFSKAAFKLKTGEVSDPVKTQYGYHIIKKTE 92 >2JZV-A nrPDB Length = 111 Score = 91.0 bits (224), Expect = 2e-19, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 7/106 (6%) Query: 56 RCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFS-DCS 114 + SH+L+K + +K + K E ++ +++ F +A + S D Sbjct: 9 KASHILIKVKSKKSDKEGLDDKEAKQKAEEIQ------KEVSKDPSKFGEIAKKESMDTG 62 Query: 115 SAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIIL 160 SAK G+LG +GQ K FE A F L+ GE+S V + G HII Sbjct: 63 SAKKDGELGYVLKGQTDKDFEKALFKLKDGEVSEVVKSSFGYHIIK 108 >6BHF-A nrPDB Length = 299 Score = 91.0 bits (224), Expect = 2e-19, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 22/124 (17%) Query: 42 SSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEE 101 + K+ H+LVK T++EA +I+ ++ K+ +E Sbjct: 144 YNANKDQLFVKQEAHARHILVK-----------------TEDEAKRIISEIDKQPKAKKE 186 Query: 102 -DFESLASQFS-DCSSAK--ARGDLGAFSRGQMQKPFEDASFALRTGEMS-GPVFTDSGI 156 F LA++ + D +S GDLG F + QM F A+FAL G+ + PV T+ G Sbjct: 187 AKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGY 246 Query: 157 HIIL 160 HII Sbjct: 247 HIIY 250 >5EZ1-A nrPDB Length = 277 Score = 88.7 bits (218), Expect = 1e-18, Method: Composition-based stats. Identities = 36/124 (29%), Positives = 56/124 (45%), Gaps = 22/124 (17%) Query: 42 SSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEE 101 + K+ H+LVK T++EA +I+ ++ K+ +E Sbjct: 114 YNANKDQLFVKQEAHARHILVK-----------------TEDEAKRIISEIDKQPKAKKE 156 Query: 102 -DFESLASQFS-DCSSAK--ARGDLGAFSRGQMQKPFEDASFALRTGEMS-GPVFTDSGI 156 F LA++ + D +S GDLG F + QM F A+FAL G+ + PV T+ G Sbjct: 157 AKFIELANRDTIDPNSKNAQNGGDLGKFQKNQMAPDFSKAAFALTPGDYTKTPVKTEFGY 216 Query: 157 HIIL 160 HII Sbjct: 217 HIIY 220 >1FJD-A nrPDB Length = 104 Score = 86.0 bits (211), Expect = 7e-18, Method: Composition-based stats. Identities = 34/83 (40%), Positives = 47/83 (56%), Gaps = 8/83 (9%) Query: 84 EALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRT 143 E I ++K+KSG F +A+Q+S+ A+ GDLG +RG M PF++A+FAL Sbjct: 19 EKHGKIMEAMEKLKSGMR-FNEVAAQYSE-DKARQGGDLGWMTRGSMVGPFQEAAFALPV 76 Query: 144 GEMSGPVFTD------SGIHIIL 160 M PVFTD G HII+ Sbjct: 77 SGMDKPVFTDPPVKTKFGYHIIM 99 >5HTF-A nrPDB Length = 283 Score = 75.2 bits (183), Expect = 1e-14, Method: Composition-based stats. Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%) Query: 84 EALELINGYIQKIKSGEEDFESLASQFS-DCSSAKARGDLGAFSRGQMQKPFEDASFALR 142 + K+K+GE F LA ++S D +++ G L F G+M + FE A++AL Sbjct: 127 DDEATAKEIQTKLKNGE-KFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALE 185 Query: 143 T-GEMSGPVFTDSGIHIIL 160 ++SG V + G H+I Sbjct: 186 NKDDVSGIVKSTYGYHLIQ 204 >5XMC-A nrPDB Length = 722 Score = 58.7 bits (140), Expect = 1e-09, Method: Composition-based stats. Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 3/99 (3%) Query: 6 KLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNG-QGEPARVRCSHLLVKH 64 LPPGWEKR + S+GRVY+ NH T +QWE P K +G R + Sbjct: 258 PLPPGWEKR-TDSNGRVYFVNHNTRITQWEDPRSQGQLNEKPLPEGWEMRFTVDGIPYFV 316 Query: 65 SQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDF 103 +RR +++ + ++ + I Y++ K+ + F Sbjct: 317 DHNRRATTYIDPRTGKSALDNGPQI-AYVRDFKAKVQYF 354 Score = 52.9 bits (125), Expect = 6e-08, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%) Query: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCS 58 E LPPGWE+R+ GR+YY +H T + W+RP+ S + Q + ++++ + Sbjct: 177 EPLPPGWERRVDNM-GRIYYVDHFTRTTTWQRPTLESVRNYEQWQLQRSQLQGA 229 Score = 47.9 bits (112), Expect = 2e-06, Method: Composition-based stats. Identities = 16/34 (47%), Positives = 24/34 (70%), Gaps = 1/34 (2%) Query: 4 EEKLPPGWEKRMSRSSGRVYYFNHITNASQWERP 37 + LPPGWE+R+ + GRVYY +H+ + W+RP Sbjct: 144 QAPLPPGWEQRVDQ-HGRVYYVDHVEKRTTWDRP 176 Score = 34.0 bits (76), Expect = 0.031, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 32/82 (39%), Gaps = 4/82 (4%) Query: 3 DEEKLPPGWEKRMSRSSGRVYYFNHITNASQ-WERPSGNS--SSGGKNGQGEPARVRCSH 59 +E+ LP GWE R + G Y+ +H A+ + +G S +G + + + + Sbjct: 295 NEKPLPEGWEMRFT-VDGIPYFVDHNRRATTYIDPRTGKSALDNGPQIAYVRDFKAKVQY 353 Query: 60 LLVKHSQSRRPSSWRQEKITRT 81 Q P + +T Sbjct: 354 FRFWCQQLAMPQHIKITVTRKT 375 >2PV2-A nrPDB Length = 103 Score = 52.1 bits (123), Expect = 1e-07, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 10/107 (9%) Query: 54 RVRCSHLLVKHSQSRRPSSWRQEKITRTKEEALELINGYIQKIKSGEEDFESLASQFSDC 113 + SH+L+ + + EA + + ++G DF LA S Sbjct: 2 ELNLSHILI---------PLPENPTSDQVNEAESQARAIVDQARNGA-DFGKLAIAHSAD 51 Query: 114 SSAKARGDLGAFSRGQMQKPFEDASFALRTGEMSGPVFTDSGIHIIL 160 A G +G ++ F A + G++ GP+ + G HI+ Sbjct: 52 QQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILK 98 >2PV3-A nrPDB Length = 299 Score = 51.7 bits (122), Expect = 1e-07, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 46/136 (33%), Gaps = 11/136 (8%) Query: 26 NHITNASQWERPSGNSSSGGKNGQGE-PARVRCSHLLVKHSQSRRPSSWRQEKITRTKEE 84 N + S + Q + + SH+L+ + + E Sbjct: 124 NEVRRRITILPQEVESLAQQVGNQNDASTELNLSHILI---------PLPENPTSDQVNE 174 Query: 85 ALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFALRTG 144 A + + ++G DF LA S A G +G ++ F A + G Sbjct: 175 AESQARAIVDQARNGA-DFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKG 233 Query: 145 EMSGPVFTDSGIHIIL 160 ++ GP+ + G HI+ Sbjct: 234 DIVGPIRSGVGFHILK 249 >3GPK-A nrPDB Length = 112 Score = 51.7 bits (122), Expect = 1e-07, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 37/79 (46%), Gaps = 1/79 (1%) Query: 82 KEEALELINGYIQKIKSGEEDFESLASQFSDCSSAKARGDLGAFSRGQMQKPFEDASFAL 141 K + ++++K G F + A Q+S+ S+A GDLG Q+ + ++ Sbjct: 22 KPQVFANAEKIVEQLKQG-GSFVAYARQYSEASTAAVGGDLGWIRLAQLPTELATTAASM 80 Query: 142 RTGEMSGPVFTDSGIHIIL 160 G+++GPV G I+ Sbjct: 81 GPGQLAGPVEIRGGFSILY 99 >3OLM-A nrPDB Length = 429 Score = 46.3 bits (108), Expect = 5e-06, Method: Composition-based stats. Identities = 21/99 (21%), Positives = 39/99 (39%), Gaps = 8/99 (8%) Query: 6 KLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSS-SGGKNGQGEPARVRCSHLLVKH 64 LP GWE R++ ++ RVY+ +H T + W+ P SS R + + + Sbjct: 8 PLPSGWEMRLTNTA-RVYFVDHNTKTTTWDDPRLPSSLDQNVPQYKRDFRRKV--IYFRS 64 Query: 65 SQSRRPSSWRQEKITRTK----EEALELINGYIQKIKSG 99 + R + R K + E++ + +K Sbjct: 65 QPALRILPGQCHIKVRRKNIFEDAYQEIMRQTPEDLKKR 103 >2KGJ-A nrPDB Length = 102 Score = 45.6 bits (106), Expect = 9e-06, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 43/87 (49%), Gaps = 8/87 (9%) Query: 78 ITRTKEEALELINGYIQKIKSGEEDFESLASQFS-DCSSAKARGDLGAFSRGQMQKPFED 136 T+T++EA +++ + DF +LA + S D SA+ GD+G + ++ Sbjct: 12 QTKTEDEAKAVLDELNKG-----GDFAALAKEKSADIISARNGGDMGWLEDATIPDELKN 66 Query: 137 ASFALRTGEMSGPVFTDSGIHIILRTE 163 A G++SG + + G +I+R + Sbjct: 67 AGLK-EKGQLSGVIKSSVGF-LIVRLD 91 >5TJ8-A nrPDB Length = 447 Score = 45.2 bits (105), Expect = 1e-05, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%) Query: 9 PGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCS 58 PGWEKR + GR YY +H T + W+RP+ + Q + +++ + Sbjct: 2 PGWEKR-TDPRGRFYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGA 50 >5TVL-A nrPDB Length = 287 Score = 34.0 bits (76), Expect = 0.028, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 15/124 (12%) Query: 42 SSGGKNGQGEPARVRCSHLLVKHSQSRRPSSWRQEKITRTKEE-------------ALEL 88 S G + A++R S L+ + + E + +E + Sbjct: 73 SQAGMTLETRKAQIRTSKLVELAVKKVAEAELTDEAYKKAFDEYTPDVTAQIIRLNNEDK 132 Query: 89 INGYIQKIKSGEEDFESLASQFS-DCSSAKARGDLGAFSRGQMQKP-FEDASFALRTGEM 146 ++K K+ DF LA S D + + G++ S + A+FAL + Sbjct: 133 AKEVLEKAKAEGADFAQLAKDNSTDEKTKENGGEITFDSASTEVPEQVKKAAFALDVDGV 192 Query: 147 SGPV 150 S + Sbjct: 193 SDVI 196 >1O6W-A nrPDB Length = 75 Score = 30.5 bits (67), Expect = 0.31, Method: Composition-based stats. Identities = 12/26 (46%), Positives = 17/26 (65%) Query: 13 KRMSRSSGRVYYFNHITNASQWERPS 38 K +SGR+YY+N +T S WE+P Sbjct: 5 KEAKDASGRIYYYNTLTKKSTWEKPK 30 >1OZ7-A nrPDB Length = 131 Score = 28.2 bits (61), Expect = 1.6, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 20/55 (36%), Gaps = 6/55 (10%) Query: 8 PPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARVRCSHLLV 62 PPGW SS VY + W+ + GK+G + +LV Sbjct: 3 PPGW------SSNGVYCYMLFKEPKTWDEAEKFCNKQGKDGHLLSIESKKEEILV 51 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.302 0.122 0.315 Lambda K H 0.267 0.0366 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,621,793 Number of Sequences: 36641 Number of extensions: 189932 Number of successful extensions: 472 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 60 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 356 Number of HSP's gapped (non-prelim): 88 length of query: 163 length of database: 10,336,785 effective HSP length: 90 effective length of query: 73 effective length of database: 7,039,095 effective search space: 513853935 effective search space used: 513853935 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.4 bits) S2: 55 (26.0 bits)