BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q13158 (208 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2GF5-A nrPDB 383 e-107 3EZQ-B nrPDB 241 2e-64 1E41-A nrPDB 209 7e-55 3OQ9-H nrPDB 192 1e-49 1A1Z-A nrPDB 159 7e-40 1FAD-A nrPDB 141 2e-34 5JQE-A nrPDB 47 4e-06 5H31-A nrPDB 45 2e-05 2YVI-A nrPDB 41 4e-04 4D8O-A nrPDB 36 0.013 4O6X-A nrPDB 35 0.029 2OF5-A nrPDB 34 0.039 6IU0-A nrPDB 28 2.3 1ICH-A nrPDB 28 2.3 6FDL-A nrPDB 28 2.4 4AZ9-A nrPDB 28 2.9 4O9F-A nrPDB 28 3.3 >2GF5-A nrPDB Length = 191 Score = 383 bits (984), Expect = e-107, Method: Compositional matrix adjust. Identities = 189/190 (99%), Positives = 190/190 (100%) Query: 2 DPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTE 61 DPFLVLLHSVSSSLSSSELTELK+LCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTE Sbjct: 2 DPFLVLLHSVSSSLSSSELTELKYLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTE 61 Query: 62 LLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKV 121 LLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKV Sbjct: 62 LLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKV 121 Query: 122 SDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ 181 SDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ Sbjct: 122 SDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ 181 Query: 182 QARDLQNRSG 191 QARDLQNRSG Sbjct: 182 QARDLQNRSG 191 >3EZQ-B nrPDB Length = 122 Score = 241 bits (614), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 152 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE Sbjct: 1 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 60 Query: 153 KENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS 208 KENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS Sbjct: 61 KENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS 116 >1E41-A nrPDB Length = 104 Score = 209 bits (532), Expect = 7e-55, Method: Compositional matrix adjust. Identities = 101/104 (97%), Positives = 102/104 (98%) Query: 89 GAAPGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW 148 G+ GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW Sbjct: 1 GSHMGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW 60 Query: 149 KNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGA 192 KNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGA Sbjct: 61 KNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGA 104 >3OQ9-H nrPDB Length = 100 Score = 192 bits (487), Expect = 1e-49, Method: Compositional matrix adjust. Identities = 92/92 (100%), Positives = 92/92 (100%) Query: 93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 152 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE Sbjct: 1 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 60 Query: 153 KENATVAHLVGALRSCQMNLVADLVQEVQQAR 184 KENATVAHLVGALRSCQMNLVADLVQEVQQAR Sbjct: 61 KENATVAHLVGALRSCQMNLVADLVQEVQQAR 92 >1A1Z-A nrPDB Length = 91 Score = 159 bits (403), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 82/83 (98%), Positives = 82/83 (98%) Query: 1 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 60 MDPFLVLLHSVSSSLSSSELTELK LCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT Sbjct: 1 MDPFLVLLHSVSSSLSSSELTELKGLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 60 Query: 61 ELLRELLASLRRHDLLRRVDDFE 83 ELLRELLASLRRHDLLRRVDDFE Sbjct: 61 ELLRELLASLRRHDLLRRVDDFE 83 >1FAD-A nrPDB Length = 99 Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 62/99 (62%), Positives = 85/99 (85%) Query: 85 GAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRES 144 G+ A PGE L AF+++CDNVG+DW+RLAR+LKVS+ K+D IE++YPR+L+ERVRES Sbjct: 1 GSHMAAPPGEAYLQVAFDIVCDNVGRDWKRLARELKVSEAKMDGIEEKYPRSLSERVRES 60 Query: 145 LRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQA 183 L++WKN EK+NA+VA LV ALR+C++NLVADLV+E Q++ Sbjct: 61 LKVWKNAEKKNASVAGLVKALRTCRLNLVADLVEEAQES 99 >5JQE-A nrPDB Length = 565 Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 8 LHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELL 67 L+ + L S +L LKFL L + +RK E ++ L LF L E+ LE + L+ELL Sbjct: 386 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 445 Query: 68 ASLRRHDLL 76 + R DLL Sbjct: 446 FRINRLDLL 454 Score = 32.3 bits (72), Expect = 0.14, Method: Compositional matrix adjust. Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 1/80 (1%) Query: 4 FLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELL 63 + V+L+ +S +S SEL K + K KL+ + LD+F + ++ L G ++L Sbjct: 480 YRVMLYQISEEVSRSELRSFKGGLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDIL 539 Query: 64 RELLASLRRHDLLRRVDDFE 83 + + A + + LL+ ++D+E Sbjct: 540 KRVCAQINKS-LLKIINDYE 558 >5H31-A nrPDB Length = 188 Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 8 LHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELL 67 L+ + L S +L LKFL L + +RK E ++ L LF L E+ LE + L+ELL Sbjct: 7 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 66 Query: 68 ASLRRHDLL 76 + R DLL Sbjct: 67 FRINRLDLL 75 Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust. Identities = 23/80 (28%), Positives = 45/80 (56%), Gaps = 1/80 (1%) Query: 4 FLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELL 63 + V+L+ +S +S SEL K L + K KL+ + LD+F + ++ L G ++L Sbjct: 101 YRVMLYQISEEVSRSELRSFKALLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKLDIL 160 Query: 64 RELLASLRRHDLLRRVDDFE 83 + + A + + LL+ ++D+E Sbjct: 161 KRVCAQINKS-LLKIINDYE 179 >2YVI-A nrPDB Length = 111 Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 103 VICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLV 162 VI +++G W LAR+L+ S I+ I P +L E+ L +W E +NA + +L Sbjct: 23 VISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSVALLNLWVIREGQNANMENLY 82 Query: 163 GALRSCQMNLVADLVQ-EVQQARDLQ 187 AL+S + ++++ +Q+R+L+ Sbjct: 83 TALQSIDRGEIVNMLEGSGRQSRNLK 108 >4D8O-A nrPDB Length = 581 Score = 35.8 bits (81), Expect = 0.013, Method: Compositional matrix adjust. Identities = 19/62 (30%), Positives = 33/62 (53%) Query: 104 ICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVG 163 I D++G W LAR+L ++ +I I P +L ++ L+ W + ++AT +LV Sbjct: 504 IADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERDGKHATDTNLVE 563 Query: 164 AL 165 L Sbjct: 564 CL 565 >4O6X-A nrPDB Length = 121 Score = 34.7 bits (78), Expect = 0.029, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 31/63 (49%) Query: 103 VICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLV 162 ++ D++G W LAR+L S +I+ I P +L + L+ W + +NAT L Sbjct: 10 IVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALT 69 Query: 163 GAL 165 L Sbjct: 70 SVL 72 >2OF5-A nrPDB Length = 114 Score = 34.3 bits (77), Expect = 0.039, Method: Compositional matrix adjust. Identities = 17/71 (23%), Positives = 33/71 (46%) Query: 101 FNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAH 160 N + +G +W + L +S T I + +P N+ +V E+ W+ + AT Sbjct: 27 INQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQS 86 Query: 161 LVGALRSCQMN 171 L LR+ +++ Sbjct: 87 LHNGLRAVEVD 97 >6IU0-A nrPDB Length = 216 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Query: 108 VGKDWR---RLARQLKVSDTKIDSIEDRYPRN 136 VG+DW RL + LKVSD K ++ ++P N Sbjct: 142 VGRDWDEILRLVKALKVSDEKGVALPHKWPNN 173 >1ICH-A nrPDB Length = 112 Score = 28.5 bits (62), Expect = 2.3, Method: Compositional matrix adjust. Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Query: 99 AAFNVICDNVGK-DWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW-KNTEKENA 156 A + +NV W+ ++L +SD +ID +E + R L E L W + T + A Sbjct: 14 ATLYAVVENVPPLRWKEFVKRLGLSDHEIDRLELQNGRCLREAQYSMLATWRRRTPRREA 73 Query: 157 TVAHLVGALRSCQMNLVADLVQEVQQA 183 T+ L LR M+L+ L +++++A Sbjct: 74 TLELLGRVLRD--MDLLGCL-EDIEEA 97 >6FDL-A nrPDB Length = 160 Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust. Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 13/93 (13%) Query: 99 AAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATV 158 A F +CD + K+ + + ++L + I +++R+SLR + NT ATV Sbjct: 42 AEFMCVCD-ISKENKEVIQELNNCQVTVAHINATAKNAADDKLRQSLRRFANTHTAPATV 100 Query: 159 AHLVGALRSCQMNLVADLVQEVQQARDLQNRSG 191 L S +N +L DL++R G Sbjct: 101 -----VLVSTDVNFAMEL-------SDLRHRHG 121 >4AZ9-A nrPDB Length = 129 Score = 28.1 bits (61), Expect = 2.9, Method: Compositional matrix adjust. Identities = 14/38 (36%), Positives = 23/38 (60%) Query: 47 SMLLEQNDLEPGHTELLRELLASLRRHDLLRRVDDFEA 84 S E++DLE G+T E+L + R+H + +R +F A Sbjct: 29 SFRYEESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHA 66 >4O9F-A nrPDB Length = 97 Score = 27.7 bits (60), Expect = 3.3, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 10/55 (18%) Query: 139 ERVRESLRIWKNTEK----------ENATVAHLVGALRSCQMNLVADLVQEVQQA 183 +R+R + W N + N V L+GALR+C+++ +AD V + + Sbjct: 43 DRLRATYERWGNQDTLLELFTSLRCRNGWVHSLIGALRACELSGLADEVARIYHS 97 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2GF5-A nrPDB 304 1e-83 3EZQ-B nrPDB 198 1e-51 1E41-A nrPDB 171 3e-43 3OQ9-H nrPDB 155 1e-38 1FAD-A nrPDB 148 2e-36 1A1Z-A nrPDB 134 2e-32 5JQE-A nrPDB 108 1e-24 2YVI-A nrPDB 106 6e-24 5H31-A nrPDB 97 7e-21 Sequences not found previously or not previously below threshold: 4O6X-A nrPDB 74 4e-14 4D8O-A nrPDB 74 5e-14 2OF5-A nrPDB 42 2e-04 2OF5-H nrPDB 42 2e-04 1WXP-A nrPDB 38 0.003 5XME-A nrPDB 36 0.009 1ICH-A nrPDB 36 0.011 5LDE-A nrPDB 33 0.089 3CL3-A nrPDB 33 0.11 2BBZ-A nrPDB 33 0.12 2F1S-A nrPDB 32 0.15 3EZQ-A nrPDB 31 0.33 3OQ9-A nrPDB 31 0.43 6IU0-A nrPDB 29 1.8 4TUG-C nrPDB 28 2.1 3AV0-A nrPDB 28 2.2 5UKE-A nrPDB 28 3.1 5DZ7-A nrPDB 27 4.3 4O9F-A nrPDB 27 5.3 4AZ9-A nrPDB 27 7.1 >2GF5-A nrPDB Length = 191 Score = 304 bits (779), Expect = 1e-83, Method: Composition-based stats. Identities = 189/190 (99%), Positives = 190/190 (100%) Query: 2 DPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTE 61 DPFLVLLHSVSSSLSSSELTELK+LCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTE Sbjct: 2 DPFLVLLHSVSSSLSSSELTELKYLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTE 61 Query: 62 LLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKV 121 LLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKV Sbjct: 62 LLRELLASLRRHDLLRRVDDFEAGAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKV 121 Query: 122 SDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ 181 SDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ Sbjct: 122 SDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQ 181 Query: 182 QARDLQNRSG 191 QARDLQNRSG Sbjct: 182 QARDLQNRSG 191 >3EZQ-B nrPDB Length = 122 Score = 198 bits (504), Expect = 1e-51, Method: Composition-based stats. Identities = 116/116 (100%), Positives = 116/116 (100%) Query: 93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 152 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE Sbjct: 1 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 60 Query: 153 KENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS 208 KENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS Sbjct: 61 KENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGAMSPMSWNSDASTSEAS 116 >1E41-A nrPDB Length = 104 Score = 171 bits (432), Expect = 3e-43, Method: Composition-based stats. Identities = 101/104 (97%), Positives = 102/104 (98%) Query: 89 GAAPGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW 148 G+ GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW Sbjct: 1 GSHMGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIW 60 Query: 149 KNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGA 192 KNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGA Sbjct: 61 KNTEKENATVAHLVGALRSCQMNLVADLVQEVQQARDLQNRSGA 104 >3OQ9-H nrPDB Length = 100 Score = 155 bits (393), Expect = 1e-38, Method: Composition-based stats. Identities = 92/92 (100%), Positives = 92/92 (100%) Query: 93 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 152 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE Sbjct: 1 GEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE 60 Query: 153 KENATVAHLVGALRSCQMNLVADLVQEVQQAR 184 KENATVAHLVGALRSCQMNLVADLVQEVQQAR Sbjct: 61 KENATVAHLVGALRSCQMNLVADLVQEVQQAR 92 >1FAD-A nrPDB Length = 99 Score = 148 bits (374), Expect = 2e-36, Method: Composition-based stats. Identities = 62/99 (62%), Positives = 85/99 (85%) Query: 85 GAAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRES 144 G+ A PGE L AF+++CDNVG+DW+RLAR+LKVS+ K+D IE++YPR+L+ERVRES Sbjct: 1 GSHMAAPPGEAYLQVAFDIVCDNVGRDWKRLARELKVSEAKMDGIEEKYPRSLSERVRES 60 Query: 145 LRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEVQQA 183 L++WKN EK+NA+VA LV ALR+C++NLVADLV+E Q++ Sbjct: 61 LKVWKNAEKKNASVAGLVKALRTCRLNLVADLVEEAQES 99 >1A1Z-A nrPDB Length = 91 Score = 134 bits (338), Expect = 2e-32, Method: Composition-based stats. Identities = 82/87 (94%), Positives = 82/87 (94%) Query: 1 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 60 MDPFLVLLHSVSSSLSSSELTELK LCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT Sbjct: 1 MDPFLVLLHSVSSSLSSSELTELKGLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 60 Query: 61 ELLRELLASLRRHDLLRRVDDFEAGAA 87 ELLRELLASLRRHDLLRRVDDFE Sbjct: 61 ELLRELLASLRRHDLLRRVDDFELEHH 87 >5JQE-A nrPDB Length = 565 Score = 108 bits (271), Expect = 1e-24, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 8 LHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELL 67 L+ + L S +L LKFL L + +RK E ++ L LF L E+ LE + L+ELL Sbjct: 386 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 445 Query: 68 ASLRRHDLL 76 + R DLL Sbjct: 446 FRINRLDLL 454 Score = 44.7 bits (104), Expect = 3e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 1/83 (1%) Query: 1 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 60 + + V+L+ +S +S SEL K + K KL+ + LD+F + ++ L G Sbjct: 477 ISAYRVMLYQISEEVSRSELRSFKGGLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKL 536 Query: 61 ELLRELLASLRRHDLLRRVDDFE 83 ++L+ + A + + LL+ ++D+E Sbjct: 537 DILKRVCAQINK-SLLKIINDYE 558 >2YVI-A nrPDB Length = 111 Score = 106 bits (265), Expect = 6e-24, Method: Composition-based stats. Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 1/86 (1%) Query: 103 VICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLV 162 VI +++G W LAR+L+ S I+ I P +L E+ L +W E +NA + +L Sbjct: 23 VISEHLGLSWAELARELQFSVEDINRIRVENPNSLLEQSVALLNLWVIREGQNANMENLY 82 Query: 163 GALRSCQMNLVADLVQ-EVQQARDLQ 187 AL+S + ++++ +Q+R+L+ Sbjct: 83 TALQSIDRGEIVNMLEGSGRQSRNLK 108 >5H31-A nrPDB Length = 188 Score = 96.7 bits (239), Expect = 7e-21, Method: Composition-based stats. Identities = 27/69 (39%), Positives = 38/69 (55%) Query: 8 LHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTELLRELL 67 L+ + L S +L LKFL L + +RK E ++ L LF L E+ LE + L+ELL Sbjct: 7 LYDIGEQLDSEDLASLKFLSLDYIPQRKQEPIKDALMLFQRLQEKRMLEESNLSFLKELL 66 Query: 68 ASLRRHDLL 76 + R DLL Sbjct: 67 FRINRLDLL 75 Score = 41.2 bits (95), Expect = 3e-04, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 46/83 (55%), Gaps = 1/83 (1%) Query: 1 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHT 60 + + V+L+ +S +S SEL K L + K KL+ + LD+F + ++ L G Sbjct: 98 ISAYRVMLYQISEEVSRSELRSFKALLQEEISKCKLDDDMNLLDIFIEMEKRVILGEGKL 157 Query: 61 ELLRELLASLRRHDLLRRVDDFE 83 ++L+ + A + + LL+ ++D+E Sbjct: 158 DILKRVCAQINK-SLLKIINDYE 179 >4O6X-A nrPDB Length = 121 Score = 73.9 bits (180), Expect = 4e-14, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 35/76 (46%) Query: 103 VICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLV 162 ++ D++G W LAR+L S +I+ I P +L + L+ W + +NAT L Sbjct: 10 IVADHLGLSWTELARELNFSVDEINQIRVENPNSLISQSFMLLKKWVTRDGKNATTDALT 69 Query: 163 GALRSCQMNLVADLVQ 178 L + L++ Sbjct: 70 SVLTKINRIDIVTLLE 85 >4D8O-A nrPDB Length = 581 Score = 73.6 bits (179), Expect = 5e-14, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 37/76 (48%) Query: 104 ICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVG 163 I D++G W LAR+L ++ +I I P +L ++ L+ W + ++AT +LV Sbjct: 504 IADHLGFSWTELARELDFTEEQIHQIRIENPNSLQDQSHALLKYWLERDGKHATDTNLVE 563 Query: 164 ALRSCQMNLVADLVQE 179 L + L++ Sbjct: 564 CLTKINRMDIVHLMET 579 >2OF5-A nrPDB Length = 114 Score = 42.0 bits (97), Expect = 2e-04, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 33/70 (47%) Query: 102 NVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHL 161 N + +G +W + L +S T I + +P N+ +V E+ W+ + AT L Sbjct: 28 NQLAQRLGPEWEPMVLSLGLSQTDIYRCKANHPHNVQSQVVEAFIRWRQRFGKQATFQSL 87 Query: 162 VGALRSCQMN 171 LR+ +++ Sbjct: 88 HNGLRAVEVD 97 >2OF5-H nrPDB Length = 118 Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats. Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 3/93 (3%) Query: 104 ICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTE-KENATVAHLV 162 + +G DW +A L VS ++ I + +L E++R L W + + V LV Sbjct: 19 VAGRLGLDWPAVALHLGVSYREVQRIRHEFRDDLDEQIRHMLFSWAERQAGQPGAVGLLV 78 Query: 163 GALRSCQMNLVADLVQEVQQ--ARDLQNRSGAM 193 AL VA+ V+ V + R Q+ + A+ Sbjct: 79 QALEQSDRQDVAEEVRAVLELGRRKYQDSAAAL 111 >1WXP-A nrPDB Length = 110 Score = 38.1 bits (87), Expect = 0.003, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 45/90 (50%), Gaps = 1/90 (1%) Query: 102 NVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHL 161 V + +G+ W+ LA L++ D++I IE ++ R ++ L W++ E +AT +L Sbjct: 22 EVFANKLGEQWKILAPYLEMKDSEIRQIECDS-EDMKMRAKQLLVAWQDQEGVHATPENL 80 Query: 162 VGALRSCQMNLVADLVQEVQQARDLQNRSG 191 + AL ++ +A+ + + SG Sbjct: 81 INALNKSGLSDLAESLTNDNETNSSGPSSG 110 >5XME-A nrPDB Length = 127 Score = 36.2 bits (82), Expect = 0.009, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Query: 107 NVGKDWRRLARQLK-----VSDTKIDSIEDRYPRN-LTERVRESLRIWKNTEKENATVAH 160 +VG WR++ R L+ + D +DS+ Y R L E+ + LR + E AT+ Sbjct: 40 SVGLKWRKVGRSLQRGCRALRDPALDSLAYEYEREGLYEQAFQLLRRFVQAEGRRATLQR 99 Query: 161 LVGALRSCQMNLVAD 175 LV AL ++ +A+ Sbjct: 100 LVEALEENELTSLAE 114 >1ICH-A nrPDB Length = 112 Score = 36.2 bits (82), Expect = 0.011, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 1/96 (1%) Query: 86 AAAGAAPGEEDLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESL 145 A + +D + V+ + W+ ++L +SD +ID +E + R L E L Sbjct: 2 AHKPQSLDTDDPATLYAVVENVPPLRWKEFVKRLGLSDHEIDRLELQNGRCLREAQYSML 61 Query: 146 RIWKNTE-KENATVAHLVGALRSCQMNLVADLVQEV 180 W+ + AT+ L LR + + ++E Sbjct: 62 ATWRRRTPRREATLELLGRVLRDMDLLGCLEDIEEA 97 >5LDE-A nrPDB Length = 265 Score = 33.1 bits (74), Expect = 0.089, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 3/89 (3%) Query: 3 PFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTEL 62 P+ + + V L + ++ L FL +G R Q+ L + + L P + Sbjct: 162 PYQLTVLHVDGELCARDIRSLIFLSKDTIGSRSTP--QTFLHWVYCMENLDLLGPTDVDA 219 Query: 63 LRELLASLRRHDLLRRVDDFEAGAAAGAA 91 L +L SL R DL R+V G Sbjct: 220 LMSMLRSLSRVDLQRQVQTL-MGLHLSGP 247 >3CL3-A nrPDB Length = 183 Score = 32.7 bits (73), Expect = 0.11, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 3/89 (3%) Query: 3 PFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFSMLLEQNDLEPGHTEL 62 P+ + + V L + ++ L FL +G R Q+ L + + L P + Sbjct: 98 PYQLTVLHVDGELCARDIRSLIFLSKDTIGSRSTP--QTFLHWVYCMENLDLLGPTDVDA 155 Query: 63 LRELLASLRRHDLLRRVDDFEAGAAAGAA 91 L +L SL R DL R+V G Sbjct: 156 LMSMLRSLSRVDLQRQVQTL-MGLHLSGP 183 >2BBZ-A nrPDB Length = 249 Score = 32.7 bits (73), Expect = 0.12, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 7 LLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSG--LDLFSMLLEQNDLEPGHTELLR 64 L+ V L SSEL L+ +S ++L L + P +L Sbjct: 99 LMVCVGEELDSSELRALRLFACNLNPSLSTALSESSRFVELVLALENVGLVSPSSVSVLA 158 Query: 65 ELLASLRRHDLLRRVDDFE 83 ++L +LRR DL +++ ++E Sbjct: 159 DMLRTLRRLDLCQQLVEYE 177 >2F1S-A nrPDB Length = 186 Score = 32.3 bits (72), Expect = 0.15, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 2/79 (2%) Query: 7 LLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSG--LDLFSMLLEQNDLEPGHTELLR 64 L+ V L SSEL L+ +S ++L L + P +L Sbjct: 102 LMVCVGEELDSSELRALRLFACNLNPSLSTALSESSRFVELVLALENVGLVSPSSVSVLA 161 Query: 65 ELLASLRRHDLLRRVDDFE 83 ++L +LRR DL +++ ++E Sbjct: 162 DMLRTLRRLDLCQQLVEYE 180 >3EZQ-A nrPDB Length = 115 Score = 31.2 bits (69), Expect = 0.33, Method: Composition-based stats. Identities = 14/68 (20%), Positives = 32/68 (47%) Query: 113 RRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNL 172 + R+ V++ KID I++ ++ E+ + LR W + L+ L+ + Sbjct: 24 KGFVRKNGVNEAKIDEIKNDNVQDTAEQKVQLLRNWHQLHGKKEAYDTLIKDLKKANLCT 83 Query: 173 VADLVQEV 180 +A+ +Q + Sbjct: 84 LAEKIQTI 91 >3OQ9-A nrPDB Length = 86 Score = 30.8 bits (68), Expect = 0.43, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 31/70 (44%) Query: 113 RRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNL 172 ++ AR+ + + KID I ++ E+ + L W + ++ L+ L+ + Sbjct: 16 KKFARENNIKEGKIDEIMHDSIQDTAEQKVQLLLCWYQSHGKSDAYQDLIKGLKKAECRR 75 Query: 173 VADLVQEVQQ 182 D Q++ Q Sbjct: 76 TLDKFQDMVQ 85 >6IU0-A nrPDB Length = 216 Score = 28.9 bits (63), Expect = 1.8, Method: Composition-based stats. Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 3/32 (9%) Query: 108 VGKDWR---RLARQLKVSDTKIDSIEDRYPRN 136 VG+DW RL + LKVSD K ++ ++P N Sbjct: 142 VGRDWDEILRLVKALKVSDEKGVALPHKWPNN 173 >4TUG-C nrPDB Length = 337 Score = 28.5 bits (62), Expect = 2.1, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 1 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFS 47 ++P++ L + L +L + + LG + KR LER G+ +S Sbjct: 165 INPYIPLDY----ELEHFDLPKFSYYALGHIHKRILERFNDGILAYS 207 >3AV0-A nrPDB Length = 386 Score = 28.5 bits (62), Expect = 2.2, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 4/47 (8%) Query: 1 MDPFLVLLHSVSSSLSSSELTELKFLCLGRVGKRKLERVQSGLDLFS 47 ++P++ L + L +L + + LG + KR LER G+ +S Sbjct: 181 INPYIPLDY----ELEHFDLPKFSYYALGHIHKRILERFNDGILAYS 223 >5UKE-A nrPDB Length = 124 Score = 28.1 bits (61), Expect = 3.1, Method: Composition-based stats. Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%) Query: 96 DLCAAFNVICDNVGKDWRRLARQLKVSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKEN 155 +LCA + +G WR LA +L S +D IE + + RE L W ++N Sbjct: 32 ELCAVLDSCDGALG--WRGLAERLSSSWLDVDHIEKEVDQGKS-GTRELLWSWA---QKN 85 Query: 156 ATVAHLVGALR 166 T+ L+ L+ Sbjct: 86 KTIGDLLQVLQ 96 >5DZ7-A nrPDB Length = 308 Score = 27.3 bits (59), Expect = 4.3, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 6/45 (13%) Query: 51 EQNDLEPGHTELLRELLASLRRHDLLRRVD------DFEAGAAAG 89 E++ L+ HTE + L + L+RV+ DF AG + G Sbjct: 65 EKSYLDVNHTEYTQPALYVVNALSYLKRVEETGRKPDFAAGHSLG 109 >4O9F-A nrPDB Length = 97 Score = 27.3 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Query: 121 VSDTKIDSIEDRYPRNLTERVRESLRIWKNTEKENATVAHLVGALRSCQMNLVADLVQEV 180 ++ + D + Y R + L ++ + N V L+GALR+C+++ +AD V + Sbjct: 37 LTTSDQDRLRATYERWGNQDT--LLELFTSLRCRNGWVHSLIGALRACELSGLADEVARI 94 Query: 181 QQA 183 + Sbjct: 95 YHS 97 >4AZ9-A nrPDB Length = 129 Score = 26.6 bits (57), Expect = 7.1, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 22/34 (64%) Query: 51 EQNDLEPGHTELLRELLASLRRHDLLRRVDDFEA 84 E++DLE G+T E+L + R+H + +R +F A Sbjct: 33 EESDLERGYTVFKIEVLMNGRKHFVEKRYSEFHA 66 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.134 0.359 Lambda K H 0.267 0.0416 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 7,280,897 Number of Sequences: 36641 Number of extensions: 260306 Number of successful extensions: 806 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 37 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 758 Number of HSP's gapped (non-prelim): 64 length of query: 208 length of database: 10,336,785 effective HSP length: 93 effective length of query: 115 effective length of database: 6,929,172 effective search space: 796854780 effective search space used: 796854780 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 57 (26.5 bits)