BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q13093
         (441 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5LZ5-A nrPDB                                                          800   0.0  
5YAL-A nrPDB                                                           64   2e-10
4EB0-A nrPDB                                                           33   0.37 
1XFD-A nrPDB                                                           32   0.67 
4HXF-B nrPDB                                                           31   0.89 
1L1F-A nrPDB                                                           30   1.8  
2QT9-A nrPDB                                                           30   2.5  
6DHM-A nrPDB                                                           29   3.5  
6EOT-A nrPDB                                                           29   4.2  
6EHN-A nrPDB                                                           29   4.3  
6EIC-C nrPDB                                                           29   4.5  
5WX1-A nrPDB                                                           28   6.8  
4CBI-A nrPDB                                                           28   6.8  
5LA7-A nrPDB                                                           28   9.3  

>5LZ5-A nrPDB
          Length = 388

 Score =  800 bits (2067), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 383/383 (100%), Positives = 383/383 (100%)

Query: 46  MAAASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLDTLWIPNKEYFW 105
           MAAASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLDTLWIPNKEYFW
Sbjct: 1   MAAASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLDTLWIPNKEYFW 60

Query: 106 GLSKFLGTHWLMGNILRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGI 165
           GLSKFLGTHWLMGNILRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGI
Sbjct: 61  GLSKFLGTHWLMGNILRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGI 120

Query: 166 DLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQR 225
           DLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQR
Sbjct: 121 DLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQR 180

Query: 226 AKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE 285
           AKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE
Sbjct: 181 AKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE 240

Query: 286 DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMIT 345
           DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMIT
Sbjct: 241 DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMIT 300

Query: 346 IRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQW 405
           IRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQW
Sbjct: 301 IRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQW 360

Query: 406 DCLIEGDDENLIPGTNINTTNQH 428
           DCLIEGDDENLIPGTNINTTNQH
Sbjct: 361 DCLIEGDDENLIPGTNINTTNQH 383


>5YAL-A nrPDB
          Length = 342

 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 58/232 (25%)

Query: 76  NKGTFLRLYYPSQDNDRLDTLWIPNKEYFWGLSK-FLGTHWLMGNILRLLFGSMTTPANW 134
           N+   + L+YPS  +      ++        LS+  LG   L G     + G+   P   
Sbjct: 38  NRELMVTLWYPSLPSREPAAPYVSKP-----LSRAVLGNDVLAGVRTHAVAGARPAPV-- 90

Query: 135 NSPLRPGEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQS 194
                     PLVV S G G  R   +A+G DLAS G+ VAAV+H       TY      
Sbjct: 91  --------PRPLVVLSPGFGMSRITLTALGEDLASRGYAVAAVDH-------TY------ 129

Query: 195 AAEIGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKN-ALDLKF 253
                              E  +  E    R ++C+  L     +D G  V+N A DL+F
Sbjct: 130 -------------------EAPV--EFPGGRIEKCT--LCDDSRMDPGAVVRNRAKDLRF 166

Query: 254 DMEQLKDS-----IDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMF 300
            +++L        +D  +I V GHS GGA+ ++ + ED+R    I LD   F
Sbjct: 167 VLDRLTGPGSELRVDARRIGVAGHSIGGASAVEVMREDRRVDAAINLDGNFF 218


>4EB0-A nrPDB
          Length = 258

 Score = 32.7 bits (73), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 52/152 (34%), Gaps = 50/152 (32%)

Query: 147 VVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYL 206
           +  S G  A  +  + +G  LASHGF+V  +    R     + + D  A+++   +  YL
Sbjct: 54  IAMSPGYTADASSLAWLGRRLASHGFVVLVINTNSR-----FDYPDSRASQL-SAALNYL 107

Query: 207 RTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREK 266
           RT             VR R                                    +D  +
Sbjct: 108 RTSSPSA--------VRAR------------------------------------LDANR 123

Query: 267 IAVIGHSFGGATVIQTLSEDQRFRCGIALDAW 298
           +AV GHS GG   ++   ++   +  + L  W
Sbjct: 124 LAVAGHSMGGGGTLRIAEQNPSLKAAVPLTPW 155


>1XFD-A nrPDB
          Length = 723

 Score = 31.6 bits (70), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 20/175 (11%)

Query: 228 ECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTL---- 283
           E  + L L+ + D  + V+  L  ++        IDR ++AV G  +GG      L    
Sbjct: 549 EVRRRLGLLEEKDQMEAVRTMLKEQY--------IDRTRVAVFGKDYGGYLSTYILPAKG 600

Query: 284 -SEDQRFRCGIALDAWM-FPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKER 341
            ++ Q F CG AL     F L    +S     L  +++  ++    + K+    S  +E+
Sbjct: 601 ENQGQTFTCGSALSPITDFKLYASAFSERYLGLHGLDNRAYE----MTKVAHRVSALEEQ 656

Query: 342 KMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHL 396
           + + I  +  +    F   T ++I  +++ K +    +  D S+  + + L++HL
Sbjct: 657 QFLIIHPTADEKI-HFQH-TAELITQLIRGKANYSLQIYPDESHYFTSSSLKQHL 709


>4HXF-B nrPDB
          Length = 622

 Score = 31.2 bits (69), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 257 QLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRI 310
           +L+   DRE+I + G S+GG      L++   F+ GI+ +   + L    +S I
Sbjct: 450 RLEPQADRERIGITGISYGGYMTNWALTQSDLFKAGISENGISYWLTSYAFSDI 503


>1L1F-A nrPDB
          Length = 505

 Score = 30.4 bits (67), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 22/110 (20%)

Query: 190 FKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDI---------- 239
           F D+ A+ + DK    LRT + EE+   R   + +  K C+  LSL   I          
Sbjct: 20  FFDRGASIVEDKLVEDLRTRESEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVI 79

Query: 240 --------DHGKPVKNAL----DLKFDMEQLKDSIDREKIAVIGHSFGGA 277
                    H  P K  +    D+  D  +   S+   K AV+   FGGA
Sbjct: 80  EGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGA 129


>2QT9-A nrPDB
          Length = 766

 Score = 29.6 bits (65), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 6/58 (10%)

Query: 262 IDREKIAVIGHSFGGATVIQTL-SEDQRFRCGIA---LDAWMF--PLGDEVYSRIPQP 313
           +D ++IA+ G S+GG      L S    F+CGIA   +  W +   +  E Y  +P P
Sbjct: 619 VDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDSVYTERYMGLPTP 676


>6DHM-A nrPDB
          Length = 582

 Score = 29.3 bits (64), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 22/110 (20%)

Query: 190 FKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDI---------- 239
           F D+ A+ + DK    L+T + EE+   R   + +  K C+  LSL   I          
Sbjct: 97  FFDRGASIVEDKLVEDLKTRETEEQKRNRVRGILRIIKPCNHVLSLSFPIRRDDGSWEVI 156

Query: 240 --------DHGKPVKNAL----DLKFDMEQLKDSIDREKIAVIGHSFGGA 277
                    H  P K  +    D+  D  +   S+   K AV+   FGGA
Sbjct: 157 EGYRAQHSQHRTPCKGGIRYSTDVSVDEVKALASLMTYKCAVVDVPFGGA 206


>6EOT-A nrPDB
          Length = 898

 Score = 28.9 bits (63), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 11/64 (17%)

Query: 124 LFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAI-GID------LASHGFIVAA 176
           L+G +  P +    L+PG+KYP V+F +G    + + +   G+       LAS G++V  
Sbjct: 646 LYGMLYKPHD----LQPGKKYPTVLFIYGGPQVQLVNNRFKGVKYFRLNTLASLGYVVVV 701

Query: 177 VEHR 180
           +++R
Sbjct: 702 IDNR 705


>6EHN-A nrPDB
          Length = 399

 Score = 28.9 bits (63), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 23/47 (48%)

Query: 248 ALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIA 294
            L    D  +    ID +K+AV+GHS  G T +   + D RF   I+
Sbjct: 215 GLSCAMDYFETDTDIDHKKVAVLGHSRLGKTSLWAGAIDTRFALTIS 261


>6EIC-C nrPDB
          Length = 279

 Score = 28.9 bits (63), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 2/51 (3%)

Query: 146 LVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHR--DRSASATYYFKDQS 194
           +VV +HGLG     Y  +   L + G +  A++HR   RS       +D S
Sbjct: 32  VVVLAHGLGEHARRYDHVAQRLGAAGLVTYALDHRGHGRSGGKRVLVRDIS 82


>5WX1-A nrPDB
          Length = 733

 Score = 28.5 bits (62), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 25/49 (51%)

Query: 142 EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYF 190
           +K+P + F+  +G  +    A GI  AS+G+     + + R+A   Y F
Sbjct: 319 QKHPSIAFNLRIGEMKEGDMATGITYASYGYFCQMPQPKLRAAMVEYSF 367


>4CBI-A nrPDB
          Length = 516

 Score = 28.5 bits (62), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 14/49 (28%), Positives = 25/49 (51%)

Query: 142 EKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYF 190
           +K+P + F+  +G  +    A GI  AS+G+     + + R+A   Y F
Sbjct: 94  QKHPSIAFNLRIGEMKEGDMATGITYASYGYFCQMSQPKLRAAMVEYSF 142


>5LA7-A nrPDB
          Length = 509

 Score = 27.7 bits (60), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 33/88 (37%), Gaps = 17/88 (19%)

Query: 76  NKGTFLRLYYPSQDNDRLDTLWIPNKEYFWGLSKFLGTHWLMGNILRL------LFGSMT 129
           N   +LRL YP             NK+    L + LG H L+   ++L      +    T
Sbjct: 425 NVTKYLRLPYP-----------FSNKQVDKYLLRPLGPHGLLSKSVQLNGLTLKMVDDQT 473

Query: 130 TPANWNSPLRPGEKYPLVVFSHGLGAFR 157
            P     PLRPG    L  FS+     R
Sbjct: 474 LPPLMEKPLRPGSSLGLPAFSYSFFVIR 501


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5LZ5-A nrPDB                                                          736   0.0  
5YAL-A nrPDB                                                          245   3e-65

Sequences not found previously or not previously below threshold:

4EB0-A nrPDB                                                           44   2e-04
2E3J-A nrPDB                                                           33   0.22 
1JFR-A nrPDB                                                           33   0.26 
4HXF-B nrPDB                                                           33   0.30 
4CG2-A nrPDB                                                           32   0.39 
2VOU-A nrPDB                                                           32   0.73 
6EIC-C nrPDB                                                           31   1.1  
4WFK-A nrPDB                                                           30   1.6  
5XXB-N nrPDB                                                           30   2.3  
5JRK-A nrPDB                                                           30   2.9  
4IG7-A nrPDB                                                           29   4.3  
4I6N-A nrPDB                                                           29   4.3  
5THM-A nrPDB                                                           29   4.5  
5VC6-A nrPDB                                                           29   5.0  
5MSX-A nrPDB                                                           29   5.0  
3FNB-A nrPDB                                                           29   5.9  

>5LZ5-A nrPDB
          Length = 388

 Score =  736 bits (1901), Expect = 0.0,   Method: Composition-based stats.
 Identities = 383/383 (100%), Positives = 383/383 (100%)

Query: 46  MAAASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLDTLWIPNKEYFW 105
           MAAASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLDTLWIPNKEYFW
Sbjct: 1   MAAASFGQTKIPRGNGPYSVGCTDLMFDHTNKGTFLRLYYPSQDNDRLDTLWIPNKEYFW 60

Query: 106 GLSKFLGTHWLMGNILRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGI 165
           GLSKFLGTHWLMGNILRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGI
Sbjct: 61  GLSKFLGTHWLMGNILRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGI 120

Query: 166 DLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQR 225
           DLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQR
Sbjct: 121 DLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHIRNEQVRQR 180

Query: 226 AKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE 285
           AKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE
Sbjct: 181 AKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQTLSE 240

Query: 286 DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMIT 345
           DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMIT
Sbjct: 241 DQRFRCGIALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMIT 300

Query: 346 IRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQW 405
           IRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQW
Sbjct: 301 IRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKASLAFLQKHLGLHKDFDQW 360

Query: 406 DCLIEGDDENLIPGTNINTTNQH 428
           DCLIEGDDENLIPGTNINTTNQH
Sbjct: 361 DCLIEGDDENLIPGTNINTTNQH 383


>5YAL-A nrPDB
          Length = 342

 Score =  245 bits (625), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 65/232 (28%), Positives = 95/232 (40%), Gaps = 58/232 (25%)

Query: 76  NKGTFLRLYYPSQDNDRLDTLWIPNKEYFWGLSK-FLGTHWLMGNILRLLFGSMTTPANW 134
           N+   + L+YPS  +      ++        LS+  LG   L G     + G+   P   
Sbjct: 38  NRELMVTLWYPSLPSREPAAPYVSKP-----LSRAVLGNDVLAGVRTHAVAGARPAPV-- 90

Query: 135 NSPLRPGEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQS 194
                     PLVV S G G  R   +A+G DLAS G+ VAAV+H       TY      
Sbjct: 91  --------PRPLVVLSPGFGMSRITLTALGEDLASRGYAVAAVDH-------TY------ 129

Query: 195 AAEIGDKSWLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKN-ALDLKF 253
                              E  +  E    R ++C+  L     +D G  V+N A DL+F
Sbjct: 130 -------------------EAPV--EFPGGRIEKCT--LCDDSRMDPGAVVRNRAKDLRF 166

Query: 254 DMEQLKDS-----IDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMF 300
            +++L        +D  +I V GHS GGA+ ++ + ED+R    I LD   F
Sbjct: 167 VLDRLTGPGSELRVDARRIGVAGHSIGGASAVEVMREDRRVDAAINLDGNFF 218


>4EB0-A nrPDB
          Length = 258

 Score = 43.6 bits (101), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 49/152 (32%), Gaps = 50/152 (32%)

Query: 147 VVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYL 206
           +  S G  A  +  + +G  LASHGF+V  +                             
Sbjct: 54  IAMSPGYTADASSLAWLGRRLASHGFVVLVIN---------------------------- 85

Query: 207 RTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREK 266
                   T+ R +    RA + S AL+ +                      +  +D  +
Sbjct: 86  --------TNSRFDYPDSRASQLSAALNYLRTSSPSAV--------------RARLDANR 123

Query: 267 IAVIGHSFGGATVIQTLSEDQRFRCGIALDAW 298
           +AV GHS GG   ++   ++   +  + L  W
Sbjct: 124 LAVAGHSMGGGGTLRIAEQNPSLKAAVPLTPW 155


>2E3J-A nrPDB
          Length = 356

 Score = 33.2 bits (74), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%)

Query: 121 LRLLFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHR 180
           +  +     T  +  +   P ++ PLVV  HG       +      LA  G+ V A++ R
Sbjct: 4   VHRILNCRGTRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQR 63

Query: 181 DRSASATY 188
               S+ Y
Sbjct: 64  GYGRSSKY 71


>1JFR-A nrPDB
          Length = 262

 Score = 33.2 bits (74), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/32 (37%), Positives = 20/32 (62%)

Query: 147 VVFSHGLGAFRTLYSAIGIDLASHGFIVAAVE 178
           VV S G  A+++  + +G  LAS GF+V  ++
Sbjct: 57  VVISPGFTAYQSSIAWLGPRLASQGFVVFTID 88


>4HXF-B nrPDB
          Length = 622

 Score = 32.8 bits (73), Expect = 0.30,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 257 QLKDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRI 310
           +L+   DRE+I + G S+GG      L++   F+ GI+ +   + L    +S I
Sbjct: 450 RLEPQADRERIGITGISYGGYMTNWALTQSDLFKAGISENGISYWLTSYAFSDI 503


>4CG2-A nrPDB
          Length = 282

 Score = 32.4 bits (72), Expect = 0.39,   Method: Composition-based stats.
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 139 RPGEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVE 178
           R    Y  V  S G        + +G  +ASHGF+V  ++
Sbjct: 46  RENNTYGAVAISPGYTGTEASIAWLGERIASHGFVVITID 85


>2VOU-A nrPDB
          Length = 397

 Score = 31.6 bits (70), Expect = 0.73,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 14/50 (28%)

Query: 265 EKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMFPLGDEVYSRIPQPL 314
           ++IAV+G S  G T    L        G+ +D         VY R PQPL
Sbjct: 6   DRIAVVGGSISGLTAALMLR-----DAGVDVD---------VYERSPQPL 41


>6EIC-C nrPDB
          Length = 279

 Score = 30.8 bits (68), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 143 KYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDRSASA 186
              +VV +HGLG     Y  +   L + G +  A++HR    S 
Sbjct: 29  PQAVVVLAHGLGEHARRYDHVAQRLGAAGLVTYALDHRGHGRSG 72


>4WFK-A nrPDB
          Length = 273

 Score = 30.5 bits (67), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 147 VVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEHRDR 182
           V  + G  A +   S  G  +AS GFIV  ++   R
Sbjct: 66  VAVAPGFTASQGSMSWYGERVASQGFIVFTIDTNTR 101


>5XXB-N nrPDB
          Length = 269

 Score = 29.7 bits (65), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 66/184 (35%), Gaps = 14/184 (7%)

Query: 49  ASFGQTKIPRGNGPYSVGCTDLMFD---HTNK---GTFLRLYYPSQDNDRLDTLWIPNKE 102
           AS    ++ +G     V C D+      H N+     FLRL   S        L  P++ 
Sbjct: 86  ASVVAKELLKGQQIICVRCEDINISGSLHRNRLKYQRFLRLRMNSNPRRGPYHLRAPSRI 145

Query: 103 YFWGLSKFLGTHWLMGNILRL---LFGSMTTPANWNSPLRPGEKYPLVVFSHGLGAFRT- 158
            +  +   L      G        ++  + T       +       +V         R  
Sbjct: 146 LWRTIRGMLRHKVERGQKALARLQVYEGVPTMVERKKRMVVPSALRIVRLKPKRNFCRLG 205

Query: 159 -LYSAIGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKSWLYLRTLKQEEETHI 217
            L S +G    SHG +VA +E + ++ S+ YY K +   ++  ++  + +T   +++   
Sbjct: 206 DLSSQVG---WSHGDLVARLEEKRKTRSSAYYQKKKERTKMQTEAKQFAQTTLPKDQVAF 262

Query: 218 RNEQ 221
             + 
Sbjct: 263 LQQY 266


>5JRK-A nrPDB
          Length = 756

 Score = 29.7 bits (65), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 9/62 (14%)

Query: 259 KDSIDREKIAVIGHSFGGATVIQTLSEDQRFRCGIALDAWMF-PLG--------DEVYSR 309
           +  ID  ++ + G+S G   V  T++  + FR   + D     P G        D VY  
Sbjct: 565 EGLIDPARVGIAGYSRGSQMVNVTVTNSKMFRAASSGDGGFLEPAGYATGRSSYDAVYGG 624

Query: 310 IP 311
            P
Sbjct: 625 AP 626


>4IG7-A nrPDB
          Length = 343

 Score = 28.9 bits (63), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 234 SLILDIDHGKPVKNALDLKFDMEQLKDSI---DREKIAVIGHSFGGATVIQTLSEDQRFR 290
               D+D G  +K   D  +D++     +   + EKI  + +SFG   + +   + +   
Sbjct: 131 CDHPDVDLGPTLKEFKDFTYDLDSASRGLCLTNSEKIRAVHNSFGRQQLFEIDDQQKLDE 190

Query: 291 CGIALDAWMFPLGDEVY 307
             +       P+ D VY
Sbjct: 191 EDVFHFVTYVPVNDGVY 207


>4I6N-A nrPDB
          Length = 231

 Score = 28.9 bits (63), Expect = 4.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 234 SLILDIDHGKPVKNALDLKFDMEQLKDSI---DREKIAVIGHSFGGATVIQTLSEDQRFR 290
               D+D G  +K   D  +D++     +   + EKI  + +SFG   + +   + +   
Sbjct: 102 CDHPDVDLGPTLKEFKDFTYDLDSASRGLCLTNSEKIRAVHNSFGRQQLFEIDDQQKLDE 161

Query: 291 CGIALDAWMFPLGDEVY 307
             +       P+ D VY
Sbjct: 162 EDVFHFVTYVPVNDGVY 178


>5THM-A nrPDB
          Length = 533

 Score = 28.9 bits (63), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 249 LDLKFDMEQLKDSI-----DREKIAVIGHSFGGATV-IQTLSED--QRFRCGIALDAW 298
            D +  ++ +K +I     + + + ++GHS GGA+V +Q L ED  Q  +   +    
Sbjct: 169 KDQRLALKWIKQNIASFGGEPQNVLLVGHSAGGASVHLQMLREDFGQLAKAAFSFSGN 226


>5VC6-A nrPDB
          Length = 289

 Score = 28.9 bits (63), Expect = 5.0,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 28/99 (28%), Gaps = 19/99 (19%)

Query: 98  IPNKEYFWGLSKFLGTHWLMGNILRL--------------LFGSMTTPAN---WNSPLRP 140
           I + +   G S+FL    L  N   L                G+   P N   W+   + 
Sbjct: 184 ISSPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQG 243

Query: 141 GEKYPLVVFSHGLGAFRTLYSAIGIDLASHGFIVAAVEH 179
                  V S        L   I  D       +A V+H
Sbjct: 244 RLPRIPQVLSQEF--TELLKVMIHPDPERRPSAMALVKH 280


>5MSX-A nrPDB
          Length = 459

 Score = 28.9 bits (63), Expect = 5.0,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 10/120 (8%)

Query: 294 ALDAWMFPLGDEVYSRIPQPLFFINSEYFQYPANIIKMKKCYSPDKERKMITIRGSVHQN 353
           + D   FP   +     P    F N +Y+ YP     M    +   E      RG   + 
Sbjct: 77  SFDGTYFPSAAKEKYWAPSKAIFANGKYYIYPTINGYMYPAVADKPEGPFKLARGK-DEF 135

Query: 354 FADFTFATGKIIGHMLKLK--GDIDSNVAIDLSNKASLAFLQKHLG-LHKDFDQWDCLIE 410
           +  FT +T      +L+ K  G ID+ + +D   +A + + ++H+  L++D    D +++
Sbjct: 136 YKPFTPST------LLQSKNPGGIDAEIFVDDDGQAYVFWGRRHVAKLNEDMITVDSVVQ 189


>3FNB-A nrPDB
          Length = 405

 Score = 28.5 bits (62), Expect = 5.9,   Method: Composition-based stats.
 Identities = 13/30 (43%), Positives = 18/30 (60%)

Query: 265 EKIAVIGHSFGGATVIQTLSEDQRFRCGIA 294
           EKIA+ G S GG    Q + +D+R +  IA
Sbjct: 228 EKIAIAGFSGGGYFTAQAVEKDKRIKAWIA 257


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.318    0.130    0.378 

Lambda     K      H
   0.267   0.0398    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,993,253
Number of Sequences: 36641
Number of extensions: 746653
Number of successful extensions: 1977
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1937
Number of HSP's gapped (non-prelim): 52
length of query: 441
length of database: 10,336,785
effective HSP length: 100
effective length of query: 341
effective length of database: 6,672,685
effective search space: 2275385585
effective search space used: 2275385585
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)