BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q12904 (312 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4R3Z-A nrPDB 633 0.0 1E7Z-A nrPDB 351 2e-97 1NTG-A nrPDB 171 4e-43 4R1J-A nrPDB 158 2e-39 1MKH-A nrPDB 87 7e-18 1RQG-A nrPDB 87 9e-18 4UP8-A nrPDB 82 2e-16 3ERS-X nrPDB 80 8e-16 5H34-A nrPDB 75 3e-14 1PYB-A nrPDB 56 2e-08 2CWP-A nrPDB 51 5e-07 2E8G-A nrPDB 40 0.001 2NZO-A nrPDB 38 0.007 2Q2H-A nrPDB 37 0.014 3G48-A nrPDB 35 0.035 1GD7-A nrPDB 33 0.11 2YZS-A nrPDB 32 0.26 4TXA-A nrPDB 32 0.32 4QIL-A nrPDB 32 0.46 3BU2-A nrPDB 30 0.93 2Q2I-A nrPDB 30 1.0 2JH3-A nrPDB 29 2.6 6BQ9-A nrPDB 28 4.1 3HOX-E nrPDB 28 5.0 1HJB-A nrPDB 28 5.2 6MG1-A nrPDB 28 5.7 4V4N-AD nrPDB 28 6.2 1WZ2-A nrPDB 28 6.9 2ABK-A nrPDB 27 9.5 >4R3Z-A nrPDB Length = 312 Score = 633 bits (1632), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 1 MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIE 60 MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIE Sbjct: 1 MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIE 60 Query: 61 ELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKGGTGDE 120 ELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKGGTGDE Sbjct: 61 ELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKGGTGDE 120 Query: 121 KKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVD 180 KKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVD Sbjct: 121 KKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVD 180 Query: 181 VGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILA 240 VGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILA Sbjct: 181 VGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILA 240 Query: 241 PPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGV 300 PPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGV Sbjct: 241 PPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGV 300 Query: 301 CRAQTMSNSGIK 312 CRAQTMSNSGIK Sbjct: 301 CRAQTMSNSGIK 312 >1E7Z-A nrPDB Length = 174 Score = 351 bits (900), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 165/166 (99%), Positives = 166/166 (100%) Query: 147 SKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM 206 +KPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM Sbjct: 1 AKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM 60 Query: 207 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP 266 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP Sbjct: 61 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP 120 Query: 267 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 312 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK Sbjct: 121 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 166 >1NTG-A nrPDB Length = 172 Score = 171 bits (433), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 85/161 (52%), Positives = 114/161 (70%), Gaps = 5/161 (3%) Query: 153 SRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCN 212 SRLD+R+G IIT KHPDADSLYVE++DVGE PRTVVSGLV VP E++Q+R+V++LCN Sbjct: 8 SRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCN 67 Query: 213 LKPAKMRGVLSQAMVMCASSP---EKIEILAPPNGSVPGDRITFDAF-PGEPDKELNPKK 268 LKP KMRGV SQ M++CAS ++E L PP GS PG+ + + G+PD+EL PKK Sbjct: 68 LKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKK 127 Query: 269 KIWEQIQPDLHTNDECVATYKGVPFEVK-GKGVCRAQTMSN 308 K++E++Q D ++EC+A +K F K G C++ N Sbjct: 128 KVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGN 168 >4R1J-A nrPDB Length = 197 Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 76/139 (54%), Positives = 95/139 (68%), Gaps = 2/139 (1%) Query: 153 SRLDLRIGCIITARKHPDADSLYVEEVDVG-EIAPRTVVSGLVNHVPLEQMQNRMVILLC 211 S +D R+G I A KHPDADSLYV +DVG E PRTV SGLV H PL+ MQ R V+++C Sbjct: 28 SAIDFRVGFIQKAIKHPDADSLYVSTIDVGDEEGPRTVCSGLVKHFPLDAMQERYVVVVC 87 Query: 212 NLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGE-PDKELNPKKKI 270 NLKP MRG+ S AMV+C S+ +K+E + PP S GD++ F+ F E P K+LNPKKKI Sbjct: 88 NLKPVNMRGIKSTAMVLCGSNDDKVEFVEPPKDSKAGDKVFFEGFGDEAPMKQLNPKKKI 147 Query: 271 WEQIQPDLHTNDECVATYK 289 WE +QP TND +K Sbjct: 148 WEHLQPHFTTNDGLEVIFK 166 >1MKH-A nrPDB Length = 107 Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D ++LDLR+G II + HP+AD LYV +VD+G+ RT+V+GL + E++ NR V+++ Sbjct: 7 DFAKLDLRVGKIIEVKDHPNADKLYVVKVDLGD-EVRTLVAGLKKYYKPEELLNRYVVVV 65 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAP 241 NL+P K+RG+ SQ M++ A E++ +L P Sbjct: 66 ANLEPKKLRGIGSQGMLLAADDGERVALLMP 96 >1RQG-A nrPDB Length = 722 Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 40/91 (43%), Positives = 64/91 (70%), Gaps = 1/91 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D ++LDLR+G II + HP+AD LYV +VD+G+ RT+V+GL + E++ NR V+++ Sbjct: 622 DFAKLDLRVGKIIEVKDHPNADKLYVVKVDLGD-EVRTLVAGLKKYYKPEELLNRYVVVV 680 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAP 241 NL+P K+RG+ SQ M++ A E++ +L P Sbjct: 681 ANLEPKKLRGIGSQGMLLAADDGERVALLMP 711 >4UP8-A nrPDB Length = 777 Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 37/83 (44%), Positives = 59/83 (71%) Query: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209 +D +L++R+G I+ A HP+++ L +VDVGE PR+VV+GL H E++ N+ Sbjct: 616 LDGFQLEIRVGKIVEAGPHPNSEHLLALKVDVGEEKPRSVVAGLAEHYKPEELLNQKATF 675 Query: 210 LCNLKPAKMRGVLSQAMVMCASS 232 +CNLKP+K+RGV S+AM++ A+S Sbjct: 676 VCNLKPSKLRGVASEAMILAATS 698 >3ERS-X nrPDB Length = 118 Score = 80.5 bits (197), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 42/106 (39%), Positives = 69/106 (65%), Gaps = 3/106 (2%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D +RL++R+G I+ ++H +AD LY+ +VDVG+ +TV S LV + E++ + V++L Sbjct: 8 DFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTS-LVPYYSEEELMGKTVVVL 66 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIE-ILAPPNGSVP-GDRITFD 254 CNL+ AKMRG S+ M++CA + + E +L P +P G R+ D Sbjct: 67 CNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVVLD 112 >5H34-A nrPDB Length = 135 Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 33/92 (35%), Positives = 61/92 (66%), Gaps = 1/92 (1%) Query: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209 +D ++LD+R+G II + HP+AD LY+ +V +G +T+V GL + E++ + V+L Sbjct: 34 LDFAKLDMRVGKIIDVQDHPNADKLYIIKVSLGN-KQKTLVGGLKQYYKKEELIGKYVVL 92 Query: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAP 241 + NLKP ++RG+ S+ M++ A +++ +L P Sbjct: 93 INNLKPKQLRGITSEGMLLAADDGKEVALLMP 124 >1PYB-A nrPDB Length = 111 Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 26/91 (28%), Positives = 55/91 (60%), Gaps = 1/91 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D ++DLR+ +++A + ++ L + +G+ RTVV+G+ + E++ + ++++ Sbjct: 11 DFLKVDLRVAKVLSAERVEGSEKLLKLTLSLGD-EERTVVAGIAKYYTPEELVGKKIVIV 69 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAP 241 NLKP K+ G+ SQ M++ AS E + ++ P Sbjct: 70 ANLKPRKIFGIESQGMILAASDGENLSVIVP 100 >2CWP-A nrPDB Length = 112 Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 + + +++G + A K L VD G RT+V+G+ + +P E+++ + I + Sbjct: 11 EFWKFQMKVGLVKKAEKIKRTKKLIKLIVDFGN-EERTIVTGIADQIPPEELEGKKFIFV 69 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP-GDRI 251 NLKP K GV SQ M++ A + + L P VP G R+ Sbjct: 70 VNLKPKKFSGVESQGMLILAETEDGKVYLIPVPEEVPVGARV 111 >2E8G-A nrPDB Length = 241 Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 7/80 (8%) Query: 152 VSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLC 211 V +D+ +G +++ KHP AD L V V++GE A V+ + N + +++ NR+ + L Sbjct: 133 VIAVDIVVGEVMSVGKHPSADRLLVTNVNIGERA----VTVVTNDLTVKE-GNRVAVAL- 186 Query: 212 NLKPAKMRGVLSQAMVMCAS 231 L P G++S+ M + A Sbjct: 187 -LPPRNFFGIVSEGMFLGAG 205 >2NZO-A nrPDB Length = 113 Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust. Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEV-DVG-EIAPRTVVSGLVNHVPLEQMQNRMVI 208 D +LD+R G I+ A + P+A ++ V D G EI + + + E + N+ VI Sbjct: 9 DFEKLDIRTGTIVKAEEFPEARVPAIKLVIDFGTEIGIKQSSAQITKRYKPEGLINKQVI 68 Query: 209 LLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP 247 + N P ++ G S+ +V+ + +L P+ VP Sbjct: 69 AVVNFPPRRIAGFKSEVLVLGGIPGQGDVVLLQPDQPVP 107 >2Q2H-A nrPDB Length = 131 Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust. Identities = 24/100 (24%), Positives = 49/100 (49%), Gaps = 2/100 (2%) Query: 131 GEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVE-EVDVG-EIAPRT 188 G+K+ Q + A S + D ++D+R+G I+ A P+A ++ ++D G EI + Sbjct: 7 GQKQHYVQPTAANSGEISYADFEKVDIRVGTIVEAVPFPEARKPAIKVKIDFGPEIGIKK 66 Query: 189 VVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVM 228 + + H E + R V+ + N P ++ S+ + + Sbjct: 67 SSAQITVHYTPESLVGRQVLGVVNFPPRQIGPFRSEVLTL 106 >3G48-A nrPDB Length = 112 Score = 35.4 bits (80), Expect = 0.035, Method: Compositional matrix adjust. Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 2/104 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVE-EVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209 D LDLRIG + A + +A + E+D GE+ + + + E + + ++ Sbjct: 9 DFLTLDLRIGTVTHAEEFKEARVPAIRLEIDFGELGMKQSSAQITKRYNPEDLIGQQIVA 68 Query: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP-GDRIT 252 + N P ++ G S+ +V+ +L PN +P G +I+ Sbjct: 69 VVNFPPKRVAGFKSEVLVLGGVPEAGDVVLLQPNMELPNGTKIS 112 >1GD7-A nrPDB Length = 109 Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 1/94 (1%) Query: 155 LDLRIGCIITARKHPDA-DSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNL 213 LDLR+G ++ A H A Y VD+G + + + + E + R+V+ NL Sbjct: 10 LDLRVGRVLRAEPHEKARKPSYKLWVDLGPLGVKQSSAQITELYRPEDLVGRLVVCAVNL 69 Query: 214 KPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP 247 ++ G LS+ +V+ +L P+ VP Sbjct: 70 GAKRVAGFLSEVLVLGVPDEAGRVVLLAPDREVP 103 >2YZS-A nrPDB Length = 315 Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 4/49 (8%) Query: 43 REEKKLRVENAKLKKEI--EELKQELIQAEIQNGVKQIPFPS--GTPLH 87 R E LR ENA++KK+I E++++ + AE+ K + F + G PLH Sbjct: 14 RHENTLRFENAEVKKDIPVEDVEEIFVFAELSLNTKLLNFLASKGIPLH 62 >4TXA-A nrPDB Length = 484 Score = 32.0 bits (71), Expect = 0.32, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 140 SIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHV 197 +IA P +++RL + + PDA E+++ G +A RTVV GLV+++ Sbjct: 338 TIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYI 395 >4QIL-A nrPDB Length = 330 Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 31/58 (53%) Query: 140 SIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHV 197 +IA P +++RL + + PDA E+++ G +A RTVV GLV+++ Sbjct: 253 TIALQRTGDPANLNRLRPHLELLANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYI 310 >3BU2-A nrPDB Length = 199 Score = 30.4 bits (67), Expect = 0.93, Method: Compositional matrix adjust. Identities = 27/80 (33%), Positives = 34/80 (42%), Gaps = 15/80 (18%) Query: 157 LRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVN---------HVPLEQMQNRMV 207 +G + T KHPDAD L V VDV +V G N M + MV Sbjct: 93 FVVGYVETKDKHPDADKLSVLSVDVA-TEKLQIVCGAPNVEAGQKVVVAKVGAVMPSGMV 151 Query: 208 ILLCNLKPAKMRGVLSQAMV 227 I K A++RGV S M+ Sbjct: 152 I-----KDAELRGVASSGMI 166 >2Q2I-A nrPDB Length = 116 Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/80 (23%), Positives = 40/80 (50%), Gaps = 2/80 (2%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVE-EVDVG-EIAPRTVVSGLVNHVPLEQMQNRMVI 208 D ++D+R+G I+ A P+A ++ ++D G EI + + + H E + R V+ Sbjct: 12 DFEKVDIRVGTIVEAVPFPEARKPAIKVKIDFGPEIGIKKSSAQITVHYTPESLVGRQVL 71 Query: 209 LLCNLKPAKMRGVLSQAMVM 228 + N P ++ S+ + + Sbjct: 72 GVVNFPPRQIGPFRSEVLTL 91 >2JH3-A nrPDB Length = 474 Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust. Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 56 KKEIEELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKG 115 K E L+Q L QA + FP PLH V E+ + V +++ +E +G Sbjct: 218 KHAAERLQQALAQAAER-------FPQAPPLHVGGPVGEHPAVAEVVLALAAEGREDERG 270 Query: 116 GTGDEKKAK 124 G D+ A+ Sbjct: 271 GDIDQAHAE 279 >6BQ9-A nrPDB Length = 496 Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 13/57 (22%) Query: 6 AVLKRLEQKGAEADQIIEYLKQQVS-------------LLKEKAILQATLREEKKLR 49 A+++R E +AD I+E +Q++ LLKE+A LQA L E KLR Sbjct: 412 ALIERFELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKLR 468 >3HOX-E nrPDB Length = 215 Score = 28.1 bits (61), Expect = 5.0, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%) Query: 167 KHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLS 223 K PD SL+VE D + +T + V H+ + Q + + N+ P+ M+ V S Sbjct: 71 KFPDMGSLWVEFCDEPSVGVKT-MKTFVIHIQEKNFQTGIFVYQNNITPSAMKLVPS 126 >1HJB-A nrPDB Length = 87 Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 2/34 (5%) Query: 48 LRVENAKLKKEIEELKQELIQAEIQNGVKQIPFP 81 L EN +L+K++E+L +EL + ++N KQ+P P Sbjct: 48 LTAENERLQKKVEQLSREL--STLRNLFKQLPEP 79 >6MG1-A nrPDB Length = 78 Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 24/34 (70%), Gaps = 2/34 (5%) Query: 48 LRVENAKLKKEIEELKQELIQAEIQNGVKQIPFP 81 L EN +L+K++E+L +EL + ++N KQ+P P Sbjct: 40 LTAENERLQKKVEQLSREL--STLRNLFKQLPEP 71 >4V4N-AD nrPDB Length = 255 Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 160 GCIITARKHPDADSLYVEEVDVGEIAPRT 188 G ++ AR HP D + V+ + V +AP T Sbjct: 206 GIVLGARNHPGVDVVVVDNLGVEHLAPGT 234 >1WZ2-A nrPDB Length = 967 Score = 27.7 bits (60), Expect = 6.9, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 27/46 (58%) Query: 42 LREEKKLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLH 87 + E KL +++ K K+++E+ + + +AE G+ ++P G P+ Sbjct: 376 VEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQ 421 >2ABK-A nrPDB Length = 211 Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust. Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 3/45 (6%) Query: 243 NGSVPGDRITFDAFPGEPDKELNPKKKI---WEQIQPDLHTNDEC 284 NG VP DR +A PG K N W I D H C Sbjct: 101 NGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVC 145 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4R3Z-A nrPDB 525 e-150 1E7Z-A nrPDB 293 7e-80 1NTG-A nrPDB 215 2e-56 4R1J-A nrPDB 200 6e-52 1RQG-A nrPDB 144 7e-35 1MKH-A nrPDB 139 2e-33 3ERS-X nrPDB 133 8e-32 4UP8-A nrPDB 132 2e-31 5H34-A nrPDB 129 2e-30 2CWP-A nrPDB 119 2e-27 1PYB-A nrPDB 115 3e-26 2E8G-A nrPDB 84 9e-17 Sequences not found previously or not previously below threshold: 1GD7-A nrPDB 76 2e-14 5ZDI-A nrPDB 74 6e-14 2Q2H-A nrPDB 74 1e-13 2NZO-A nrPDB 69 2e-12 3G48-A nrPDB 68 4e-12 2Q2I-A nrPDB 67 9e-12 4P71-A nrPDB 52 3e-07 3BU2-A nrPDB 42 5e-04 3PCO-B nrPDB 40 0.001 2RHQ-B nrPDB 38 0.004 3NET-A nrPDB 36 0.019 2JH3-A nrPDB 33 0.19 6BQ9-A nrPDB 33 0.22 4GNK-E nrPDB 30 1.00 5MLM-A nrPDB 30 1.0 1WKB-A nrPDB 30 1.4 1WZ2-A nrPDB 30 1.5 3GLM-A nrPDB 30 1.9 4JWH-A nrPDB 29 2.7 6MG1-A nrPDB 29 3.3 1HJB-A nrPDB 28 6.2 >4R3Z-A nrPDB Length = 312 Score = 525 bits (1353), Expect = e-150, Method: Composition-based stats. Identities = 312/312 (100%), Positives = 312/312 (100%) Query: 1 MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIE 60 MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIE Sbjct: 1 MANNDAVLKRLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIE 60 Query: 61 ELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKGGTGDE 120 ELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKGGTGDE Sbjct: 61 ELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKGGTGDE 120 Query: 121 KKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVD 180 KKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVD Sbjct: 121 KKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEVD 180 Query: 181 VGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILA 240 VGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILA Sbjct: 181 VGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILA 240 Query: 241 PPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGV 300 PPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGV Sbjct: 241 PPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGV 300 Query: 301 CRAQTMSNSGIK 312 CRAQTMSNSGIK Sbjct: 301 CRAQTMSNSGIK 312 >1E7Z-A nrPDB Length = 174 Score = 293 bits (750), Expect = 7e-80, Method: Composition-based stats. Identities = 165/166 (99%), Positives = 166/166 (100%) Query: 147 SKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM 206 +KPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM Sbjct: 1 AKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM 60 Query: 207 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP 266 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP Sbjct: 61 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP 120 Query: 267 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 312 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK Sbjct: 121 KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIK 166 >1NTG-A nrPDB Length = 172 Score = 215 bits (547), Expect = 2e-56, Method: Composition-based stats. Identities = 85/161 (52%), Positives = 114/161 (70%), Gaps = 5/161 (3%) Query: 153 SRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCN 212 SRLD+R+G IIT KHPDADSLYVE++DVGE PRTVVSGLV VP E++Q+R+V++LCN Sbjct: 8 SRLDIRVGKIITVEKHPDADSLYVEKIDVGEAEPRTVVSGLVQFVPKEELQDRLVVVLCN 67 Query: 213 LKPAKMRGVLSQAMVMCASSP---EKIEILAPPNGSVPGDRITFDAF-PGEPDKELNPKK 268 LKP KMRGV SQ M++CAS ++E L PP GS PG+ + + G+PD+EL PKK Sbjct: 68 LKPQKMRGVESQGMLLCASIEGINRQVEPLDPPAGSAPGEHVFVKGYEKGQPDEELKPKK 127 Query: 269 KIWEQIQPDLHTNDECVATYKGVPFEVK-GKGVCRAQTMSN 308 K++E++Q D ++EC+A +K F K G C++ N Sbjct: 128 KVFEKLQADFKISEECIAQWKQTNFMTKLGSISCKSLKGGN 168 >4R1J-A nrPDB Length = 197 Score = 200 bits (509), Expect = 6e-52, Method: Composition-based stats. Identities = 75/139 (53%), Positives = 95/139 (68%), Gaps = 2/139 (1%) Query: 153 SRLDLRIGCIITARKHPDADSLYVEEVDVGEIA-PRTVVSGLVNHVPLEQMQNRMVILLC 211 S +D R+G I A KHPDADSLYV +DVG+ PRTV SGLV H PL+ MQ R V+++C Sbjct: 28 SAIDFRVGFIQKAIKHPDADSLYVSTIDVGDEEGPRTVCSGLVKHFPLDAMQERYVVVVC 87 Query: 212 NLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGE-PDKELNPKKKI 270 NLKP MRG+ S AMV+C S+ +K+E + PP S GD++ F+ F E P K+LNPKKKI Sbjct: 88 NLKPVNMRGIKSTAMVLCGSNDDKVEFVEPPKDSKAGDKVFFEGFGDEAPMKQLNPKKKI 147 Query: 271 WEQIQPDLHTNDECVATYK 289 WE +QP TND +K Sbjct: 148 WEHLQPHFTTNDGLEVIFK 166 >1RQG-A nrPDB Length = 722 Score = 144 bits (362), Expect = 7e-35, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 67/101 (66%), Gaps = 1/101 (0%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D ++LDLR+G II + HP+AD LYV +VD+G+ RT+V+GL + E++ NR V+++ Sbjct: 622 DFAKLDLRVGKIIEVKDHPNADKLYVVKVDLGD-EVRTLVAGLKKYYKPEELLNRYVVVV 680 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRI 251 NL+P K+RG+ SQ M++ A E++ +L P G ++ Sbjct: 681 ANLEPKKLRGIGSQGMLLAADDGERVALLMPDKEVKLGAKV 721 >1MKH-A nrPDB Length = 107 Score = 139 bits (349), Expect = 2e-33, Method: Composition-based stats. Identities = 41/101 (40%), Positives = 67/101 (66%), Gaps = 1/101 (0%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D ++LDLR+G II + HP+AD LYV +VD+G+ RT+V+GL + E++ NR V+++ Sbjct: 7 DFAKLDLRVGKIIEVKDHPNADKLYVVKVDLGD-EVRTLVAGLKKYYKPEELLNRYVVVV 65 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRI 251 NL+P K+RG+ SQ M++ A E++ +L P G ++ Sbjct: 66 ANLEPKKLRGIGSQGMLLAADDGERVALLMPDKEVKLGAKV 106 >3ERS-X nrPDB Length = 118 Score = 133 bits (335), Expect = 8e-32, Method: Composition-based stats. Identities = 42/106 (39%), Positives = 69/106 (65%), Gaps = 3/106 (2%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D +RL++R+G I+ ++H +AD LY+ +VDVG+ +TV S LV + E++ + V++L Sbjct: 8 DFARLEMRVGKIVEVKRHENADKLYIVQVDVGQKTLQTVTS-LVPYYSEEELMGKTVVVL 66 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIE-ILAPPNGSVP-GDRITFD 254 CNL+ AKMRG S+ M++CA + + E +L P +P G R+ D Sbjct: 67 CNLQKAKMRGETSECMLLCAETDDGSESVLLTPERMMPAGVRVVLD 112 >4UP8-A nrPDB Length = 777 Score = 132 bits (332), Expect = 2e-31, Method: Composition-based stats. Identities = 50/152 (32%), Positives = 81/152 (53%), Gaps = 24/152 (15%) Query: 120 EKKAKEKIEKKGEKKEK-----------------KQQSIAGSADSKPIDVSRLDLRIGCI 162 EKKA+E E +EK KQQ + + +D +L++R+G I Sbjct: 574 EKKAREAKEDAMVAQEKAATEEKGGKKVVKPKANKQQPV-----KEVLDGFQLEIRVGKI 628 Query: 163 ITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVL 222 + A HP+++ L +VDVGE PR+VV+GL H E++ N+ +CNLKP+K+RGV Sbjct: 629 VEAGPHPNSEHLLALKVDVGEEKPRSVVAGLAEHYKPEELLNQKATFVCNLKPSKLRGVA 688 Query: 223 SQAMVMCAS--SPEKIEILAPPNGSVPGDRIT 252 S+AM++ A+ K++ P + G ++ Sbjct: 689 SEAMILAATSLDGTKVKFCHPSADAAIGAQVI 720 >5H34-A nrPDB Length = 135 Score = 129 bits (323), Expect = 2e-30, Method: Composition-based stats. Identities = 34/102 (33%), Positives = 64/102 (62%), Gaps = 1/102 (0%) Query: 150 IDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209 +D ++LD+R+G II + HP+AD LY+ +V +G +T+V GL + E++ + V+L Sbjct: 34 LDFAKLDMRVGKIIDVQDHPNADKLYIIKVSLGN-KQKTLVGGLKQYYKKEELIGKYVVL 92 Query: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRI 251 + NLKP ++RG+ S+ M++ A +++ +L P G ++ Sbjct: 93 INNLKPKQLRGITSEGMLLAADDGKEVALLMPDKPISLGSKV 134 >2CWP-A nrPDB Length = 112 Score = 119 bits (298), Expect = 2e-27, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 2/102 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 + + +++G + A K L VD G RT+V+G+ + +P E+++ + I + Sbjct: 11 EFWKFQMKVGLVKKAEKIKRTKKLIKLIVDFGN-EERTIVTGIADQIPPEELEGKKFIFV 69 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP-GDRI 251 NLKP K GV SQ M++ A + + L P VP G R+ Sbjct: 70 VNLKPKKFSGVESQGMLILAETEDGKVYLIPVPEEVPVGARV 111 >1PYB-A nrPDB Length = 111 Score = 115 bits (287), Expect = 3e-26, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 58/101 (57%), Gaps = 1/101 (0%) Query: 151 DVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILL 210 D ++DLR+ +++A + ++ L + +G+ RTVV+G+ + E++ + ++++ Sbjct: 11 DFLKVDLRVAKVLSAERVEGSEKLLKLTLSLGD-EERTVVAGIAKYYTPEELVGKKIVIV 69 Query: 211 CNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRI 251 NLKP K+ G+ SQ M++ AS E + ++ P G ++ Sbjct: 70 ANLKPRKIFGIESQGMILAASDGENLSVIVPDRDVKEGAKL 110 >2E8G-A nrPDB Length = 241 Score = 83.6 bits (205), Expect = 9e-17, Method: Composition-based stats. Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 17/121 (14%) Query: 152 VSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLC 211 V +D+ +G +++ KHP AD L V V++GE A V+ + N + +++ NR+ + L Sbjct: 133 VIAVDIVVGEVMSVGKHPSADRLLVTNVNIGERA----VTVVTNDLTVKE-GNRVAVAL- 186 Query: 212 NLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIW 271 L P G++S+ M + A +L G + G G P + LN + Sbjct: 187 -LPPRNFFGIVSEGMFLGAGEG----VLKNVKGEIGGLP------KGIPLEALNETRNAV 235 Query: 272 E 272 E Sbjct: 236 E 236 >1GD7-A nrPDB Length = 109 Score = 75.9 bits (185), Expect = 2e-14, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 3/107 (2%) Query: 149 PIDVSR-LDLRIGCIITARKHPDADS-LYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM 206 P++ + LDLR+G ++ A H A Y VD+G + + + + E + R+ Sbjct: 3 PLEAFQILDLRVGRVLRAEPHEKARKPSYKLWVDLGPLGVKQSSAQITELYRPEDLVGRL 62 Query: 207 VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP-GDRIT 252 V+ NL ++ G LS+ +V+ +L P+ VP G ++ Sbjct: 63 VVCAVNLGAKRVAGFLSEVLVLGVPDEAGRVVLLAPDREVPLGGKVF 109 >5ZDI-A nrPDB Length = 107 Score = 74.4 bits (181), Expect = 6e-14, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 53/102 (51%), Gaps = 2/102 (1%) Query: 151 DVSRLDLRIGCIITARKHPDADS-LYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209 D S++D+R+G I +A Y ++ G+I S + + +++ N+ +I Sbjct: 6 DFSKIDIRVGIIKEVSDFKEAIKPAYKLKIYFGDIIGYKNSSAQITNYKKDELINKKIIA 65 Query: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRI 251 + N P ++ +S+ +V+ A + + +++L P G PGD+I Sbjct: 66 VVNFPPKQIANFISEVLVLGAITGDGVKLLTPDGGE-PGDKI 106 >2Q2H-A nrPDB Length = 131 Score = 73.6 bits (179), Expect = 1e-13, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 2/119 (1%) Query: 131 GEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADS-LYVEEVDVG-EIAPRT 188 G+K+ Q + A S + D ++D+R+G I+ A P+A ++D G EI + Sbjct: 7 GQKQHYVQPTAANSGEISYADFEKVDIRVGTIVEAVPFPEARKPAIKVKIDFGPEIGIKK 66 Query: 189 VVSGLVNHVPLEQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP 247 + + H E + R V+ + N P ++ S+ + + + +LA VP Sbjct: 67 SSAQITVHYTPESLVGRQVLGVVNFPPRQIGPFRSEVLTLGFADANGDIVLAAVERPVP 125 >2NZO-A nrPDB Length = 113 Score = 69.4 bits (168), Expect = 2e-12, Method: Composition-based stats. Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%) Query: 151 DVSRLDLRIGCIITARKHPDAD-SLYVEEVDVG-EIAPRTVVSGLVNHVPLEQMQNRMVI 208 D +LD+R G I+ A + P+A +D G EI + + + E + N+ VI Sbjct: 9 DFEKLDIRTGTIVKAEEFPEARVPAIKLVIDFGTEIGIKQSSAQITKRYKPEGLINKQVI 68 Query: 209 LLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP 247 + N P ++ G S+ +V+ + +L P+ VP Sbjct: 69 AVVNFPPRRIAGFKSEVLVLGGIPGQGDVVLLQPDQPVP 107 >3G48-A nrPDB Length = 112 Score = 68.2 bits (165), Expect = 4e-12, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 1/98 (1%) Query: 151 DVSRLDLRIGCIITARKHPDAD-SLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVIL 209 D LDLRIG + A + +A E+D GE+ + + + E + + ++ Sbjct: 9 DFLTLDLRIGTVTHAEEFKEARVPAIRLEIDFGELGMKQSSAQITKRYNPEDLIGQQIVA 68 Query: 210 LCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP 247 + N P ++ G S+ +V+ +L PN +P Sbjct: 69 VVNFPPKRVAGFKSEVLVLGGVPEAGDVVLLQPNMELP 106 >2Q2I-A nrPDB Length = 116 Score = 67.1 bits (162), Expect = 9e-12, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 44/99 (44%), Gaps = 2/99 (2%) Query: 151 DVSRLDLRIGCIITARKHPDADS-LYVEEVDVG-EIAPRTVVSGLVNHVPLEQMQNRMVI 208 D ++D+R+G I+ A P+A ++D G EI + + + H E + R V+ Sbjct: 12 DFEKVDIRVGTIVEAVPFPEARKPAIKVKIDFGPEIGIKKSSAQITVHYTPESLVGRQVL 71 Query: 209 LLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVP 247 + N P ++ S+ + + + +LA VP Sbjct: 72 GVVNFPPRQIGPFRSEVLTLGFADANGDIVLAAVERPVP 110 >4P71-A nrPDB Length = 792 Score = 52.4 bits (124), Expect = 3e-07, Method: Composition-based stats. Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 13/113 (11%) Query: 149 PIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVV------SGLVNHVPLEQM 202 P+ + + +G +++ +HPDAD L V +V G + V +GL M Sbjct: 37 PVAGAFSGVVVGEVLSTEQHPDADKLRVCQVSNGSETFQVVCGAPNVRAGLK---IPFAM 93 Query: 203 QNRMVILLCNLKPAKMRGVLSQAMVMCAS----SPEKIEILAPPNGSVPGDRI 251 + +K AK+RGV S M+ A S E +L P + G + Sbjct: 94 IGAELPDDFKIKKAKLRGVESFGMLCSAKELQISEENAGLLELPADAPVGQDV 146 >3BU2-A nrPDB Length = 199 Score = 41.7 bits (96), Expect = 5e-04, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 8/96 (8%) Query: 138 QQSIAGSADSKPIDV-SRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNH 196 Q++I + + +D +G + T KHPDAD L V VDV + V + Sbjct: 73 QKAIEAAGFTYKLDADFTPKFVVGYVETKDKHPDADKLSVLSVDVATEKLQIVCG--APN 130 Query: 197 VPLEQMQNRMVILLCN-----LKPAKMRGVLSQAMV 227 V Q + +K A++RGV S M+ Sbjct: 131 VEAGQKVVVAKVGAVMPSGMVIKDAELRGVASSGMI 166 >3PCO-B nrPDB Length = 795 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 18/98 (18%) Query: 167 KHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRMVILLC---------NLKPAK 217 +HP+AD L V +V+VG +V G Q V + +K AK Sbjct: 55 QHPNADKLRVTKVNVGGDRLLDIVCG-----APNCRQGLRVAVATIGAVLPGDFKIKAAK 109 Query: 218 MRGVLSQAMVMCAS----SPEKIEILAPPNGSVPGDRI 251 +RG S+ M+ S S + I+ P + G I Sbjct: 110 LRGEPSEGMLCSFSELGISDDHSGIIELPADAPIGTDI 147 >2RHQ-B nrPDB Length = 795 Score = 38.2 bits (87), Expect = 0.004, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 13/110 (11%) Query: 150 IDVSR--LDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVN-----HVPLEQM 202 ID S+ +L +G I + K + +VD+GE P +V G N HV + ++ Sbjct: 36 IDYSKDIKNLVVGYIQSKEKGSGN----ICQVDIGEEEPVQIVCGAPNVDAGQHVIVAKV 91 Query: 203 QNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRIT 252 R+ + +K AK+RG S+ M+ C+ I P G + Sbjct: 92 GGRLPGGI-KIKRAKLRGERSEGMI-CSLQEIGISSNVVPKAYENGIFVF 139 >3NET-A nrPDB Length = 465 Score = 36.3 bits (82), Expect = 0.019, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 9/82 (10%) Query: 120 EKKAKEKIEKKGEKKEKKQQSIAGSADSKPIDVSRLDLRIGCIITARKHPDADSLYVEEV 179 E K K ++EK+G E+ Q K ID ++D + ++ KH E+ Sbjct: 219 EAKVKLELEKEGINPEQTQ---------KIIDFVKIDGSVDDVLDKLKHLSQTLPESEQF 269 Query: 180 DVGEIAPRTVVSGLVNHVPLEQ 201 ++G TV++G+ N ++ Sbjct: 270 NLGVSELETVITGVRNLGVPDK 291 >2JH3-A nrPDB Length = 474 Score = 32.8 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 7/69 (10%) Query: 56 KKEIEELKQELIQAEIQNGVKQIPFPSGTPLHANSMVSENVIQSTAVTTVSSGTKEQIKG 115 K E L+Q L QA + FP PLH V E+ + V +++ +E +G Sbjct: 218 KHAAERLQQALAQAAER-------FPQAPPLHVGGPVGEHPAVAEVVLALAAEGREDERG 270 Query: 116 GTGDEKKAK 124 G D+ A+ Sbjct: 271 GDIDQAHAE 279 >6BQ9-A nrPDB Length = 496 Score = 32.8 bits (73), Expect = 0.22, Method: Composition-based stats. Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 13/57 (22%) Query: 6 AVLKRLEQKGAEADQIIEYLKQQVS-------------LLKEKAILQATLREEKKLR 49 A+++R E +AD I+E +Q++ LLKE+A LQA L E KLR Sbjct: 412 ALIERFELTEIQADYILETRLRQLARLEEMKIRGEQDELLKEQAKLQALLGSEAKLR 468 >4GNK-E nrPDB Length = 259 Score = 30.5 bits (67), Expect = 1.00, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 33/53 (62%), Gaps = 1/53 (1%) Query: 10 RLEQKGAEADQIIEYLKQQVSLLKEKAILQATLREEKKLRVENAKLKKEIEEL 62 R Q AEA + +E+L+Q + L+E +L A + K+L+ N + KKE++++ Sbjct: 113 REAQVDAEAQRRLEHLRQALQRLRE-VVLDANTTQFKRLKEMNEREKKELQKI 164 >5MLM-A nrPDB Length = 411 Score = 30.5 bits (67), Expect = 1.0, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 37/98 (37%), Gaps = 8/98 (8%) Query: 200 EQMQNRMVILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSV---PGDRITFDAF 256 E+++ + + +P + G +M+ + + G V PG + +D + Sbjct: 210 EEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFPGCKAAWDGY 269 Query: 257 PGEPDKELNPKKKIWEQIQPD-----LHTNDECVATYK 289 D +L + IW + P + ++ V +K Sbjct: 270 SDCSDADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWK 307 >1WKB-A nrPDB Length = 810 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 27/46 (58%) Query: 42 LREEKKLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLH 87 + E KL +++ K K+++E+ + + +AE G+ ++P G P+ Sbjct: 376 VEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQ 421 >1WZ2-A nrPDB Length = 967 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 12/46 (26%), Positives = 27/46 (58%) Query: 42 LREEKKLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLH 87 + E KL +++ K K+++E+ + + +AE G+ ++P G P+ Sbjct: 376 VEEVNKLGIKSQKDKEKLEQATKTIYKAEYHKGIFKVPPYEGKPVQ 421 >3GLM-A nrPDB Length = 588 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 18/28 (64%) Query: 60 EELKQELIQAEIQNGVKQIPFPSGTPLH 87 +E +++I A+I+N ++P P P+H Sbjct: 234 DEAAEQIIAAQIENSKLKVPAPGSVPIH 261 >4JWH-A nrPDB Length = 313 Score = 28.9 bits (63), Expect = 2.7, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%) Query: 92 VSENVIQSTAVTTVSS--GTKEQIKGGTGDEKKAKEKIEKKGEKKEKKQQSIAGSADSKP 149 VS+N Q V + S+ K Q + G EK+A+ + EKK +KE++++ I K Sbjct: 30 VSKNETQEQPVLSKSALKRLKRQQEWDAGREKRAEMRREKKRLRKEERKRKIEAGEVVKS 89 Query: 150 IDVSRLDLRIGCII 163 + +R+G ++ Sbjct: 90 ---QKKRIRLGKVV 100 >6MG1-A nrPDB Length = 78 Score = 28.6 bits (62), Expect = 3.3, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%) Query: 47 KLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFP 81 +L EN +L+K++E+L +EL + ++N KQ+P P Sbjct: 39 ELTAENERLQKKVEQLSREL--STLRNLFKQLPEP 71 >1HJB-A nrPDB Length = 87 Score = 27.8 bits (60), Expect = 6.2, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 25/35 (71%), Gaps = 2/35 (5%) Query: 47 KLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFP 81 +L EN +L+K++E+L +EL + ++N KQ+P P Sbjct: 47 ELTAENERLQKKVEQLSREL--STLRNLFKQLPEP 79 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.128 0.329 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,352,590 Number of Sequences: 36641 Number of extensions: 446353 Number of successful extensions: 1785 Number of sequences better than 10.0: 41 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 59 Number of HSP's that attempted gapping in prelim test: 1641 Number of HSP's gapped (non-prelim): 160 length of query: 312 length of database: 10,336,785 effective HSP length: 97 effective length of query: 215 effective length of database: 6,782,608 effective search space: 1458260720 effective search space used: 1458260720 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 59 (27.4 bits)