BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q12464 (471 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6GEJ-U nrPDB 960 0.0 4WW4-B nrPDB 707 0.0 6QI9-D nrPDB 652 0.0 6QI8-A nrPDB 353 8e-98 6GEJ-T nrPDB 347 4e-96 5FM7-A nrPDB 327 6e-90 2XSZ-D nrPDB 311 3e-85 5OUN-A nrPDB 210 1e-54 2XSZ-A nrPDB 189 3e-48 2CQA-A nrPDB 122 2e-28 6CHS-H nrPDB 41 0.001 2X8A-A nrPDB 40 0.002 1NJG-A nrPDB 39 0.007 5C18-A nrPDB 39 0.007 3CF0-A nrPDB 39 0.007 5UBV-A nrPDB 38 0.008 6MCK-A nrPDB 38 0.009 2QZ4-A nrPDB 38 0.012 3GLF-B nrPDB 37 0.013 2CE7-A nrPDB 37 0.014 5G4G-A nrPDB 37 0.018 5VC7-A nrPDB 37 0.019 6FVU-L nrPDB 37 0.024 5WVI-L nrPDB 37 0.025 3HU1-A nrPDB 36 0.028 5GJQ-J nrPDB 36 0.034 5M32-h nrPDB 36 0.043 6EF0-L nrPDB 35 0.047 4XGU-A nrPDB 35 0.055 5VHP-C nrPDB 35 0.062 6MSD-E nrPDB 35 0.066 1LV7-A nrPDB 35 0.086 3M6A-A nrPDB 35 0.091 2R65-A nrPDB 35 0.092 5VHP-E nrPDB 35 0.096 2ZAO-A nrPDB 34 0.13 5VY8-A nrPDB 34 0.14 1SXJ-A nrPDB 34 0.14 3JCO-J nrPDB 34 0.14 6MDP-A nrPDB 34 0.15 1XWI-A nrPDB 34 0.16 5VQ9-D nrPDB 33 0.18 1D2N-A nrPDB 33 0.20 6AMN-A nrPDB 33 0.21 5WVI-K nrPDB 33 0.23 6EPC-H nrPDB 33 0.23 6EF2-J nrPDB 33 0.24 6EF1-K nrPDB 33 0.30 4HSE-A nrPDB 33 0.30 6AZ0-A nrPDB 33 0.32 5VHO-A nrPDB 33 0.34 5VFU-A nrPDB 33 0.39 5T0C-AD nrPDB 33 0.39 4D81-A nrPDB 33 0.39 4NMN-A nrPDB 32 0.44 4LCB-A nrPDB 32 0.48 1QVR-A nrPDB 32 0.57 6B5C-A nrPDB 32 0.58 5VHN-D nrPDB 32 0.60 2DHR-A nrPDB 32 0.67 1GPE-A nrPDB 32 0.67 5VFP-B nrPDB 32 0.80 5KWA-A nrPDB 32 0.82 5VHF-B nrPDB 31 0.92 6MSK-B nrPDB 31 1.0 2R6A-A nrPDB 31 1.1 1IY1-A nrPDB 31 1.1 5VHO-B nrPDB 31 1.2 6EF0-H nrPDB 31 1.2 3H4M-A nrPDB 31 1.2 6EF3-H nrPDB 31 1.2 4I5O-A nrPDB 31 1.3 6HE9-H nrPDB 30 1.8 6AP1-A nrPDB 30 2.0 3WHK-A nrPDB 30 2.0 4Z8X-A nrPDB 30 2.1 5XMK-A nrPDB 30 2.2 3PFI-A nrPDB 30 2.4 5ZQM-A nrPDB 30 2.5 6HE4-H nrPDB 30 2.5 6MAT-A nrPDB 30 2.7 2CHV-A nrPDB 30 2.9 3EIH-A nrPDB 30 2.9 5EQT-A nrPDB 30 3.0 2CHG-A nrPDB 30 3.2 2FVL-A nrPDB 29 3.6 4LGM-A nrPDB 29 3.7 3PVS-A nrPDB 29 4.3 6FVU-I nrPDB 29 4.6 5ZDH-A nrPDB 29 4.7 3D8B-A nrPDB 29 5.0 1IN6-A nrPDB 29 5.2 6EF1-I nrPDB 28 5.8 1HQC-A nrPDB 28 5.8 4JQA-A nrPDB 28 6.2 3JCP-I nrPDB 28 6.3 6B5D-A nrPDB 28 6.5 5W68-A nrPDB 28 6.6 6BLB-A nrPDB 28 6.8 4NX8-A nrPDB 28 7.1 5Z6Q-A nrPDB 28 7.4 5WC0-A nrPDB 28 7.6 5A5B-M nrPDB 28 7.6 5LKM-A nrPDB 28 8.0 5JBJ-A nrPDB 28 8.4 1YGJ-A nrPDB 28 8.8 5JM5-A nrPDB 28 8.9 >6GEJ-U nrPDB Length = 471 Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust. Identities = 471/471 (100%), Positives = 471/471 (100%) Query: 1 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM 60 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM Sbjct: 1 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM 60 Query: 61 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA Sbjct: 61 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 Query: 121 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT 180 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT Sbjct: 121 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT 180 Query: 181 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS 240 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS Sbjct: 181 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS 240 Query: 241 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM 300 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM Sbjct: 241 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM 300 Query: 301 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN 360 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN Sbjct: 301 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN 360 Query: 361 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV 420 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV Sbjct: 361 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV 420 Query: 421 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTTE 471 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTTE Sbjct: 421 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTTE 471 >4WW4-B nrPDB Length = 513 Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/450 (74%), Positives = 398/450 (88%), Gaps = 1/450 (0%) Query: 9 NETSDLKSLSLIAAHSHITGLGLD-ENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIA 67 ET +L+ L+LIAAHSHI GLG+D + L+PRP+S+G+VGQ +AR+AA V+L+M++ G IA Sbjct: 35 TETKELRGLNLIAAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAAVVLEMIKQGKIA 94 Query: 68 GRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGI 127 GRAVL+AGPPSTGKTA+AMG++QSLG+DVPFT +A SEIFSLE+SKTEALTQAFRKSIG+ Sbjct: 95 GRAVLIAGPPSTGKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTEALTQAFRKSIGV 154 Query: 128 KIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAG 187 +IKEE+E++EGEVVEIQIDRS+TGG KQGKLTIKTTDME IY++G+KMID +TKE+V+AG Sbjct: 155 RIKEESEIMEGEVVEIQIDRSVTGGAKQGKLTIKTTDMEAIYDMGSKMIDAMTKERVMAG 214 Query: 188 DVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVI 247 D+ISIDK+SGKITKLGRS+ARSRDYDAMG DT+F+QCPEGELQKRK VVHTVSLHEIDVI Sbjct: 215 DIISIDKSSGKITKLGRSYARSRDYDAMGVDTKFLQCPEGELQKRKEVVHTVSLHEIDVI 274 Query: 248 NSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFS 307 NSRTQGFLALF+GDTGEIRSE+RDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFS Sbjct: 275 NSRTQGFLALFSGDTGEIRSEIRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIECFS 334 Query: 308 FINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYNEQEIKTI 367 +INRALE + APIV+MA+NRGVS+ RGT+YKSPHGLPLD LDR +II T Y E++ I Sbjct: 335 YINRALESDLAPIVIMASNRGVSRIRGTDYKSPHGLPLDFLDRVVIINTHPYTPDELRQI 394 Query: 368 LSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAY 427 LSIRAQEEEV+L+ DAL LLTK G E LRY+SNLI+ +Q IA KR+ V VEDV+R++ Sbjct: 395 LSIRAQEEEVDLTPDALALLTKIGQEAGLRYASNLITTSQLIAAKRRAKQVGVEDVQRSF 454 Query: 428 LLFLDSARSVKYVQENESQYIDDQGNVQIS 457 LF D ARSV++VQE+E + I + G V S Sbjct: 455 KLFYDPARSVRFVQESEKRLIGNDGVVDFS 484 >6QI9-D nrPDB Length = 463 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/445 (68%), Positives = 380/445 (85%), Gaps = 1/445 (0%) Query: 5 TSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNG 64 T+ E D+ + I AHSHI GLGLD+ L+PR S+GMVGQL ARRAAGV+L+M++ G Sbjct: 7 TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREG 66 Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKS 124 IAGRAVL+AG P TGKTA+AMG++Q+LG D PFTAIAGSEIFSLE+SKTEALTQAFR+S Sbjct: 67 KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRS 126 Query: 125 IGIKIKEETELIEGEVVEIQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIDGLTKEK 183 IG++IKEETE+IEGEVVEIQIDR TG G K GKLT+KTT+METIY+LG KMI+ LTK+K Sbjct: 127 IGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDK 186 Query: 184 VLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHE 243 V AGDVI+IDKA+GKI+KLGRSF R+RDYDAMG+ T+FVQCP+GELQKRK VVHTVSLHE Sbjct: 187 VQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHE 246 Query: 244 IDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDI 303 IDVINSRTQGFLALF+GDTGEI+SEVR+QIN KVAEW+EEGKAEI+PGVLFIDEVHMLDI Sbjct: 247 IDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDI 306 Query: 304 ECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYNEQE 363 E FSF+NRALE + AP+++MATNRG+++ RGT+Y+SPHG+P+DLLDR +I++T Y+E++ Sbjct: 307 ESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKD 366 Query: 364 IKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDV 423 K IL IR +EE+VE+S DA +LT+ G+ETSLRY+ LI+ A + KRK V+V+D+ Sbjct: 367 TKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDI 426 Query: 424 KRAYLLFLDSARSVKYVQENESQYI 448 KR Y LFLD +RS +Y++E + ++ Sbjct: 427 KRVYSLFLDESRSTQYMKEYQDAFL 451 >6QI8-A nrPDB Length = 456 Score = 353 bits (906), Expect = 8e-98, Method: Compositional matrix adjust. Identities = 190/445 (42%), Positives = 284/445 (63%), Gaps = 20/445 (4%) Query: 20 IAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPST 79 IA+HSH+ GLGLDE+ + + G+VGQ AR A GVI++++++ +AGRAVL+AGPP T Sbjct: 15 IASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGT 74 Query: 80 GKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGE 139 GKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++IG++IKE E+ EGE Sbjct: 75 GKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEGE 134 Query: 140 VVEIQI--DRSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS 191 V E+ + GG+ GK + +KT +L + + L KE+V AGDVI Sbjct: 135 VTELTPCETENPMGGY--GKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIY 192 Query: 192 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRT 251 I+ SG + + GR + ++D + +V P+G++ K+K ++ V+LH++DV N+R Sbjct: 193 IEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQDVTLHDLDVANARP 250 Query: 252 QG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIE 304 QG L EI ++R +IN V ++ ++G AE+VPGVLF+DEVHMLDIE Sbjct: 251 QGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIE 310 Query: 305 CFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIIITTKSYNEQE 363 CF++++RALE APIV+ A+NRG RGT + SPHG+PLDLLDR +II T Y QE Sbjct: 311 CFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQE 370 Query: 364 IKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDV 423 +K I+ IRAQ E + +S +AL+ L + G +T+LRYS L++ A +A +++E E V Sbjct: 371 MKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHV 430 Query: 424 KRAYLLFLDSARSVKYVQENESQYI 448 + LF D+ S K + + + +Y+ Sbjct: 431 EEISELFYDAKSSAKILADQQDKYM 455 >6GEJ-T nrPDB Length = 463 Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 291/454 (64%), Gaps = 21/454 (4%) Query: 11 TSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRA 70 +S+ +++ AAH+HI GLGLDE+ + G VGQ++AR A GVI+ +++ ++GRA Sbjct: 15 SSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRA 74 Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIK 130 +L+AG PSTGKTALA+ +SQ LG VPF + GSE++S+E+ KTE L + FR++IG++IK Sbjct: 75 ILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIK 134 Query: 131 EETELIEGEVVEIQID--RSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKE 182 E E+ EGEV E+ + + GG+ GK + +K+ L + + + +E Sbjct: 135 ETKEVYEGEVTELTPEDAENPLGGY--GKTISHVIVGLKSAKGTKTLRLDPTIYESIQRE 192 Query: 183 KVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLH 242 KV GDVI I+ +G + ++GRS A + ++D + +V P+GE+ K+K +V V+LH Sbjct: 193 KVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEE--YVPLPKGEVHKKKEIVQDVTLH 250 Query: 243 EIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFI 295 ++DV N+R QG L EI ++R ++N VA++ ++G AE++PGVLFI Sbjct: 251 DLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFI 310 Query: 296 DEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIII 354 DEV+MLDIE F+++N+ALE AP+V++A+NRG++ RGT + SPHG+P DL+DR +I+ Sbjct: 311 DEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIV 370 Query: 355 TTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRK 414 T Y++ EI+TI+ RA E +++ S ALDLL G ETSLRY+ L++ +A Sbjct: 371 RTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSN 430 Query: 415 NNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 + V DV A LLFLD+ RS K + E + Y+ Sbjct: 431 RKEIVVNDVNEAKLLFLDAKRSTK-ILETSANYL 463 >5FM7-A nrPDB Length = 464 Score = 327 bits (839), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 178/432 (41%), Positives = 267/432 (61%), Gaps = 20/432 (4%) Query: 21 AAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTG 80 AAH+HI GLGL+ + + G VGQ AR A GV++ +++ +AGR VL+AG P TG Sbjct: 19 AAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKMAGRGVLLAGGPGTG 78 Query: 81 KTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEV 140 KTALA+ +SQ LG +PF I GSEI+S E+ KTE L + FR++IG++++E ++ EGEV Sbjct: 79 KTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIGLRVRETKDVYEGEV 138 Query: 141 VEIQIDRS--ITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISI 192 E+ + + GG+ GK + +K+ + L + + + KE+V GDVI I Sbjct: 139 TEMTPEEAENPLGGY--GKTISTLLIGLKSARGQKKLRLDPSIYEAIQKERVQVGDVIYI 196 Query: 193 DKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEIDVINSRTQ 252 + +G ++GRS A + ++D + +V P+GE+ K+K +V V+LH++DV N+R Q Sbjct: 197 ETNTGACKRVGRSDAYATEFDLEAEE--YVPIPKGEVHKKKEIVQDVTLHDLDVANARPQ 254 Query: 253 G-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIEC 305 G L EI ++R +IN V ++ +G AE++PGVLFIDE HMLDIEC Sbjct: 255 GGQDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPGVLFIDEAHMLDIEC 314 Query: 306 FSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIIITTKSYNEQEI 364 F+++N+ALE APIV++A+NRG++ RG + K+ HG+P D L R +II T Y EI Sbjct: 315 FTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQRLLIIPTHPYEPDEI 374 Query: 365 KTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVK 424 + I+ IRAQ E V+L+ A+D + + GV SLRY L++ A +A V+V+D+ Sbjct: 375 RRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILARVNGRTQVDVQDIA 434 Query: 425 RAYLLFLDSARS 436 A LFLD+ RS Sbjct: 435 EAEELFLDARRS 446 >2XSZ-D nrPDB Length = 378 Score = 311 bits (797), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 139/214 (64%), Positives = 181/214 (84%) Query: 235 VVHTVSLHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLF 294 VVHTVSLHEIDVINSRTQGFLALF+GDTGEI+SEVR+QIN KVAEW+EEGKAEI+PGVLF Sbjct: 153 VVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLF 212 Query: 295 IDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIII 354 IDEVHMLDIE FSF+NRALE + AP+++MATNRG+++ RGT+Y+SPHG+P+DLLDR +I+ Sbjct: 213 IDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIV 272 Query: 355 TTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRK 414 +T Y+E++ K IL IR +EE+VE+S DA +LT+ G+ETSLRY+ LI+ A + KRK Sbjct: 273 STTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRK 332 Query: 415 NNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 V+V+D+KR Y LFLD +RS +Y++E + ++ Sbjct: 333 GTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFL 366 Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 87/127 (68%), Positives = 106/127 (83%) Query: 5 TSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNG 64 T+ E D+ + I AHSHI GLGLD+ L+PR S+GMVGQL ARRAAGV+L+M++ G Sbjct: 22 TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREG 81 Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKS 124 IAGRAVL+AG P TGKTA+AMG++Q+LG D PFTAIAGSEIFSLE+SKTEALTQAFR+S Sbjct: 82 KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRS 141 Query: 125 IGIKIKE 131 IG++IKE Sbjct: 142 IGVRIKE 148 >5OUN-A nrPDB Length = 107 Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 132 ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS 191 ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS Sbjct: 5 ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS 64 Query: 192 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT 234 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT Sbjct: 65 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT 107 >2XSZ-A nrPDB Length = 367 Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 97/222 (43%), Positives = 143/222 (64%), Gaps = 8/222 (3%) Query: 235 VVHTVSLHEIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAE 287 ++ V+LH++DV N+R QG L EI ++R +IN V ++ ++G AE Sbjct: 145 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 204 Query: 288 IVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLD 346 +VPGVLF+DEVHMLDIECF++++RALE APIV+ A+NRG RGT + SPHG+PLD Sbjct: 205 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 264 Query: 347 LLDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVA 406 LLDR +II T Y QE+K I+ IRAQ E + +S +AL+ L + G +T+LRYS L++ A Sbjct: 265 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 324 Query: 407 QQIAMKRKNNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 +A +++E E V+ LF D+ S K + + + +Y+ Sbjct: 325 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 366 Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 60/112 (53%), Positives = 86/112 (76%) Query: 20 IAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPST 79 IA+HSH+ GLGLDE+ + + G+VGQ AR A GVI++++++ +AGRAVL+AGPP T Sbjct: 29 IASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPGT 88 Query: 80 GKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKE 131 GKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++IG++IKE Sbjct: 89 GKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKE 140 >2CQA-A nrPDB Length = 95 Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 64/88 (72%), Positives = 75/88 (85%), Gaps = 1/88 (1%) Query: 130 KEETELIEGEVVEIQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGD 188 KEETE+IEGEVVEIQIDR TG G K GKLT+KTT+METIY+LG KMI+ LTK+KV AGD Sbjct: 8 KEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGD 67 Query: 189 VISIDKASGKITKLGRSFARSRDYDAMG 216 VI+IDKA+GKI+KLGRSF R+R + G Sbjct: 68 VITIDKATGKISKLGRSFTRARSGPSSG 95 >6CHS-H nrPDB Length = 819 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 2/58 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 K ++ G R VL GPP TGKT LA V+ + F ++ G E+ S+ ++E+ Sbjct: 519 KFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN--FISVKGPELLSMWFGESES 574 Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust. Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-LTQAFR 122 G R VL+ GPP TGKT +A V+ G F I G EI S ++E+ L +AF Sbjct: 250 GIKPPRGVLLYGPPGTGKTLMARAVANETG--AFFFLINGPEIMSKMAGESESNLRKAFE 307 Query: 123 KS 124 ++ Sbjct: 308 EA 309 >2X8A-A nrPDB Length = 274 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFR 122 G + VL+AGPP GKT LA V+ G + F ++ G E+ ++ + ++E A+ Q F+ Sbjct: 40 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQVFQ 97 Query: 123 KS 124 ++ Sbjct: 98 RA 99 >1NJG-A nrPDB Length = 250 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 31/108 (28%), Positives = 48/108 (44%), Gaps = 16/108 (14%) Query: 292 VLFIDEVHMLDIECFSFINRALED--EFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLD 349 V IDEVHML F+ + + LE+ E ++ T+ P LP+ +L Sbjct: 129 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTD-------------PQKLPVTILS 175 Query: 350 RSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLR 397 R + K+ + ++I+ L EE + AL LL + E SLR Sbjct: 176 RCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAA-EGSLR 222 >5C18-A nrPDB Length = 785 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 K ++ G + VL GPP GKT LA ++ + F +I G E+ ++ ++EA Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 556 Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-LTQAFR 122 G R +L+ GPP TGKT +A V+ G F I G EI S ++E+ L +AF Sbjct: 233 GVKPPRGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFE 290 Query: 123 KS 124 ++ Sbjct: 291 EA 292 >3CF0-A nrPDB Length = 301 Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 K ++ G + VL GPP GKT LA ++ + F +I G E+ ++ ++EA Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 95 >5UBV-A nrPDB Length = 246 Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 24/38 (63%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + VL+ GPP TGKT LA V+ G VPF ++GSE Sbjct: 40 KGVLLVGPPGTGKTLLARAVAGEAG--VPFFYMSGSEF 75 >6MCK-A nrPDB Length = 606 Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 K ++ G + VL GPP GKT LA ++ + F +I G E+ ++ ++EA Sbjct: 294 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEA 349 Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-LTQAFR 122 G R +L+ GPP TGKT +A V+ G F I G EI S ++E+ L +AF Sbjct: 26 GVKPPRGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFE 83 Query: 123 KS 124 ++ Sbjct: 84 EA 85 >2QZ4-A nrPDB Length = 262 Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust. Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + +Q G + L+ GPP GKT LA V+ VPF A+AG+E Sbjct: 30 RFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE--AQVPFLAMAGAEF 75 >3GLF-B nrPDB Length = 395 Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 16/113 (14%) Query: 292 VLFIDEVHMLDIECFSFINRALED--EFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLD 349 V IDEVHML F+ + + LE+ E ++ T+ P LP+ +L Sbjct: 144 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTD-------------PQKLPVTILS 190 Query: 350 RSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNL 402 R + K+ + ++I+ L EE + AL LL + E SLR + +L Sbjct: 191 RCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAA-EGSLRDALSL 242 >2CE7-A nrPDB Length = 476 Score = 37.4 bits (85), Expect = 0.014, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 2/41 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 + +L+ GPP TGKT LA V+ +VPF I+GS+ L Sbjct: 50 KGILLVGPPGTGKTLLARAVAGE--ANVPFFHISGSDFVEL 88 >5G4G-A nrPDB Length = 721 Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFR 122 G + V++ GPP TGKT +A V+ G + F +I G EI S ++E L + F Sbjct: 215 GITPPKGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFS 272 Query: 123 KS 124 K+ Sbjct: 273 KA 274 Score = 34.7 bits (78), Expect = 0.089, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFR 122 G + L+ GPP GKT LA V+ + F +I G E+ S + ++E A+ + F+ Sbjct: 492 GIRPSKGFLLYGPPGVGKTLLAKAVATESNAN--FISIKGPEVLSKWVGESEKAIREIFK 549 Query: 123 KS 124 K+ Sbjct: 550 KA 551 >5VC7-A nrPDB Length = 564 Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFR 122 G + V++ GPP TGKT +A V+ G + F +I G EI S ++E L + F Sbjct: 39 GITPPKGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFS 96 Query: 123 KS 124 K+ Sbjct: 97 KA 98 Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFR 122 G + L+ GPP GKT LA V+ + F +I G E+ S + ++E A+ + F+ Sbjct: 316 GIRPSKGFLLYGPPGVGKTLLAKAVATESNAN--FISIKGPEVLSKWVGESEKAIREIFK 373 Query: 123 KS 124 K+ Sbjct: 374 KA 375 >6FVU-L nrPDB Length = 388 Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 24/40 (60%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 G + VL+ GPP TGKT LA V+ ++G + F+ +G Sbjct: 163 GIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 202 >5WVI-L nrPDB Length = 437 Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 24/40 (60%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 G + VL+ GPP TGKT LA V+ ++G + F+ +G Sbjct: 211 GIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 250 >3HU1-A nrPDB Length = 489 Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust. Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-LTQAFR 122 G R +L+ GPP TGKT +A V+ G F I G EI S ++E+ L +AF Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESESNLRKAFE 291 Query: 123 KS 124 ++ Sbjct: 292 EA 293 >5GJQ-J nrPDB Length = 406 Score = 36.2 bits (82), Expect = 0.034, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G + VL+ GPP TGKT LA V+ D F ++GSE+ Sbjct: 179 GIAQPKGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 219 >5M32-h nrPDB Length = 355 Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G + VL+ GPP TGKT LA V+ D F ++GSE+ Sbjct: 142 GIAQPKGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 182 >6EF0-L nrPDB Length = 273 Score = 35.4 bits (80), Expect = 0.047, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 23/35 (65%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 + VL+ GPP TGKT LA V+ ++G + F+ +G Sbjct: 53 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 87 >4XGU-A nrPDB Length = 424 Score = 35.4 bits (80), Expect = 0.055, Method: Compositional matrix adjust. Identities = 13/27 (48%), Positives = 18/27 (66%) Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLG 93 R +L+ GPP TGKT+L G++Q L Sbjct: 171 VNRLILLTGPPGTGKTSLCKGLAQHLS 197 >5VHP-C nrPDB Length = 266 Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G + VL+ GPP TGKT LA V+ D F ++GSE+ Sbjct: 50 GIAQPKGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSEL 90 >6MSD-E nrPDB Length = 403 Score = 35.0 bits (79), Expect = 0.066, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G I + L+ GPP TGKT LA V+ L D F + S I Sbjct: 177 GIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 217 >1LV7-A nrPDB Length = 257 Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 + VL+ GPP TGKT LA ++ VPF I+GS+ + Sbjct: 46 KGVLMVGPPGTGKTLLAKAIAGE--AKVPFFTISGSDFVEM 84 >3M6A-A nrPDB Length = 543 Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust. Identities = 14/39 (35%), Positives = 25/39 (64%) Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 ++ G + +AGPP GKT+LA +++SLG+ ++ G Sbjct: 105 SLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGG 143 >2R65-A nrPDB Length = 268 Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 + VL+ GPP TGKT LA V+ VPF ++ GS + Sbjct: 45 KGVLLVGPPGTGKTLLAKAVAGE--AHVPFFSMGGSSFIEM 83 >5VHP-E nrPDB Length = 262 Score = 34.7 bits (78), Expect = 0.096, Method: Compositional matrix adjust. Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G I + L+ GPP TGKT LA V+ L D F + S I Sbjct: 36 GIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSI 76 >2ZAO-A nrPDB Length = 444 Score = 34.3 bits (77), Expect = 0.13, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 R +L+ GPP TGK+ LA V+ F +I+ S++ S L ++E L + Sbjct: 168 RGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEKLVK 217 >5VY8-A nrPDB Length = 908 Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/39 (46%), Positives = 27/39 (69%), Gaps = 2/39 (5%) Query: 75 GPPSTGKTALAMGVSQS-LGKDVPFTAIAGSEIFSLELS 112 G P GKTA+ GV+Q + DVP T + G+++FSL+L+ Sbjct: 212 GEPGIGKTAIIEGVAQRIIDDDVP-TILQGAKLFSLDLA 249 >1SXJ-A nrPDB Length = 516 Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 ++G+ RA ++ GPP GKT A V+Q LG D+ Sbjct: 71 KDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDI 105 >3JCO-J nrPDB Length = 405 Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G + V++ GPP TGKT LA V+ D F ++G+E+ Sbjct: 178 GIAQPKGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAEL 218 >6MDP-A nrPDB Length = 768 Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 70 AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE--IFSLELSKTEALTQAF 121 +VL+ GPP +GKTALA +++ + PF I + I E +K +A+ + F Sbjct: 562 SVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSETAKCQAMKKIF 613 Score = 32.0 bits (71), Expect = 0.55, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 Q G + +L+ GPP GKT LA + + L P + G EI + + ++EA Sbjct: 271 QMGCKHVKGILLYGPPGCGKTLLARQIGKMLNAREP-KVVNGPEILNKYVGESEA 324 >1XWI-A nrPDB Length = 322 Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 1/51 (1%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 R +L+ GPP TGK+ LA V+ F +I+ S++ S L ++E L + Sbjct: 46 RGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEKLVK 95 >5VQ9-D nrPDB Length = 432 Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust. Identities = 14/30 (46%), Positives = 18/30 (60%) Query: 63 NGTIAGRAVLVAGPPSTGKTALAMGVSQSL 92 N R VL+ GPP TGKT+L ++Q L Sbjct: 167 NLITWNRVVLLHGPPGTGKTSLCKALAQKL 196 >1D2N-A nrPDB Length = 272 Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 4/54 (7%) Query: 70 AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE--IFSLELSKTEALTQAF 121 +VL+ GPP +GKTALA +++ + PF I + I E +K +A+ + F Sbjct: 66 SVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSETAKCQAMKKIF 117 >6AMN-A nrPDB Length = 349 Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%) Query: 75 GPPSTGKTALAMGVSQS-LGKDVPFTAIAGSEIFSLELSKTEA 116 G P GKTA+ GV+Q + DVP T + G+++FSL+L+ A Sbjct: 209 GEPGIGKTAIIEGVAQRIIDDDVP-TILQGAKLFSLDLAALTA 250 >5WVI-K nrPDB Length = 428 Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 Q G R VL+ GPP TGKT L V+ S F + GSE Sbjct: 200 QIGIDPPRGVLLYGPPGTGKTMLVKAVANS--TKAAFIRVNGSEF 242 >6EPC-H nrPDB Length = 433 Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + V G + VL+ GPP TGKT A V+ D F + GSE+ Sbjct: 200 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR--TDACFIPVIGSEL 245 >6EF2-J nrPDB Length = 262 Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G + V++ GPP TGKT LA V+ D F ++G+E+ Sbjct: 35 GIAQPKGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAEL 75 >6EF1-K nrPDB Length = 276 Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 2/45 (4%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 Q G R VL+ GPP TGKT L V+ S F + GSE Sbjct: 48 QIGIDPPRGVLLYGPPGTGKTMLVKAVANS--TKAAFIRVNGSEF 90 >4HSE-A nrPDB Length = 397 Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%) Query: 51 RRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGK-DVPFTAIAGSEIFSL 109 RR ++L+ +N + + G P GKTA+ G++Q + K DVP + G I SL Sbjct: 43 RRVIQILLRRTKNNPV------LIGEPGVGKTAIVEGLAQRIVKGDVP-EGLKGKRIVSL 95 Query: 110 EL 111 ++ Sbjct: 96 QM 97 >6AZ0-A nrPDB Length = 439 Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + VL+ GPP TGKT LA + G D F ++GSE Sbjct: 37 KGVLLTGPPGTGKTLLARATAGEAGVDFFF--MSGSEF 72 >5VHO-A nrPDB Length = 267 Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + V G + VL+ GPP TGKT A V+ D F + GSE+ Sbjct: 43 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 88 >5VFU-A nrPDB Length = 361 Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + V G + VL+ GPP TGKT A V+ D F + GSE+ Sbjct: 128 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSEL 173 >5T0C-AD nrPDB Length = 418 Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 Q G R VL+ GPP GKT LA V+ F + GSE Sbjct: 193 QIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT--AAFIRVVGSEF 235 >4D81-A nrPDB Length = 283 Score = 32.7 bits (73), Expect = 0.39, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 R +L+ GPP GKT +A V+ L D F + + I S L + E Sbjct: 46 RGILLYGPPGCGKTMIAAAVANEL--DSEFIHVDAASIMSKWLGEAE 90 >4NMN-A nrPDB Length = 434 Score = 32.3 bits (72), Expect = 0.44, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%) Query: 58 LKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 L + G G +++A P GKTA + + +L KD S +FSLE+SK + Sbjct: 183 LDLKTTGFHPGDLIILAARPGMGKTAFMLSIIYNLAKD----EGKPSAVFSLEMSKEQ 236 >4LCB-A nrPDB Length = 367 Score = 32.3 bits (72), Expect = 0.48, Method: Compositional matrix adjust. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 R +L+ GPP GKT LA V+ + D F + + I S L + E Sbjct: 131 RGILLYGPPGNGKTMLAAAVANEI--DSYFIHVDAASIMSKWLGEAE 175 >1QVR-A nrPDB Length = 854 Score = 32.0 bits (71), Expect = 0.57, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 8/62 (12%) Query: 51 RRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGK-DVPFTAIAGSEIFSL 109 RR ++L+ +N + + G P GKTA+ G++Q + K DVP + G I SL Sbjct: 180 RRVIQILLRRTKNNPV------LIGEPGVGKTAIVEGLAQRIVKGDVP-EGLKGKRIVSL 232 Query: 110 EL 111 ++ Sbjct: 233 QM 234 >6B5C-A nrPDB Length = 307 Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 5/44 (11%) Query: 55 GVILKMVQNGTIAG-----RAVLVAGPPSTGKTALAMGVSQSLG 93 V+L M G + VL+ GPP TGKT LA V+ G Sbjct: 40 AVVLPMWMPDFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECG 83 >5VHN-D nrPDB Length = 262 Score = 32.0 bits (71), Expect = 0.60, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 Q G R VL+ GPP GKT LA V+ F + GSE Sbjct: 49 QIGIDPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSEF 91 >2DHR-A nrPDB Length = 499 Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 + VL+ GPP GKT LA V+ VPF +GS+ + Sbjct: 65 KGVLLVGPPGVGKTHLARAVAGE--ARVPFITASGSDFVEM 103 >1GPE-A nrPDB Length = 587 Score = 32.0 bits (71), Expect = 0.67, Method: Compositional matrix adjust. Identities = 13/30 (43%), Positives = 18/30 (60%) Query: 254 FLALFTGDTGEIRSEVRDQINTKVAEWKEE 283 F A FT G+ + RD +NTK+ +W EE Sbjct: 354 FFANFTETFGDYAPQARDLLNTKLDQWAEE 383 >5VFP-B nrPDB Length = 389 Score = 31.6 bits (70), Expect = 0.80, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT-QAFR 122 G + V++ GPP TGKT LA V+ F + GSE+ L L + FR Sbjct: 164 GIKPPKGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSELIQKYLGDGPKLVRELFR 221 >5KWA-A nrPDB Length = 497 Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust. Identities = 13/26 (50%), Positives = 17/26 (65%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGK 94 + VL+ GPP GKT +A V+ SL K Sbjct: 182 KGVLLYGPPGCGKTLIAKAVANSLAK 207 >5VHF-B nrPDB Length = 340 Score = 31.2 bits (69), Expect = 0.92, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT-QAFR 122 G + V++ GPP TGKT LA V+ F + GSE+ L L + FR Sbjct: 123 GIKPPKGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSELIQKYLGDGPKLVRELFR 180 >6MSK-B nrPDB Length = 440 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT-QAFR 122 G + V++ GPP TGKT LA V+ F + GSE+ L L + FR Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSELIQKYLGDGPKLVRELFR 272 >2R6A-A nrPDB Length = 454 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 4/42 (9%) Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 ++VA PS GKTA A+ ++Q++ IFSLE+S Sbjct: 206 IIVAARPSVGKTAFALNIAQNVATKTN----ENVAIFSLEMS 243 >1IY1-A nrPDB Length = 254 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 + VL+ GPP GKT LA V+ VPF +GS+ + Sbjct: 50 KGVLLVGPPGVGKTHLARAVAGE--ARVPFITASGSDFVEM 88 >5VHO-B nrPDB Length = 267 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 3/60 (5%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT-QAFR 122 G + V++ GPP TGKT LA V+ F + GSE+ L L + FR Sbjct: 49 GIKPPKGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSELIQKYLGDGPKLVRELFR 106 >6EF0-H nrPDB Length = 257 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + +L+ GPP TGKT A V+ D F + GSE+ Sbjct: 44 KGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSEL 79 >3H4M-A nrPDB Length = 285 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + +L+ GPP TGKT LA V+ + F + GSE+ Sbjct: 52 KGILLYGPPGTGKTLLAKAVATE--TNATFIRVVGSEL 87 >6EF3-H nrPDB Length = 467 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + +L+ GPP TGKT A V+ D F + GSE+ Sbjct: 244 KGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSEL 279 >4I5O-A nrPDB Length = 363 Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 12/66 (18%) Query: 44 MVGQLQARRAAGVIL----KMVQNGTIA-----GRA-VLVAGPPSTGKTALAMGVSQSLG 93 ++GQ QA++ V + K ++NG + G++ +L+ GP +GKT LA +++ L Sbjct: 17 VIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLL- 75 Query: 94 KDVPFT 99 DVPFT Sbjct: 76 -DVPFT 80 >6HE9-H nrPDB Length = 390 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 G + VL+ GPP TGKT LA V+ F + GSE Sbjct: 163 GIEPPKGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSEF 203 >6AP1-A nrPDB Length = 519 Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 70 AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 +L+ GPP TGK+ LA V+ + F +++ S++ S + ++E L + Sbjct: 69 GILLYGPPGTGKSYLAKAVATE--ANSTFFSVSSSDLVSKWMGESEKLVK 116 >3WHK-A nrPDB Length = 270 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + VL+ GPP GKT +A ++ + + F + GSE+ Sbjct: 52 KGVLLYGPPGCGKTLMAKAIAHEV--NATFIRVVGSEL 87 >4Z8X-A nrPDB Length = 497 Score = 30.0 bits (66), Expect = 2.1, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 2/52 (3%) Query: 58 LKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 +K + G + VL+ G P GKT LA ++ VPF +++GS+ + Sbjct: 41 VKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGE--AHVPFISVSGSDFVEM 90 >5XMK-A nrPDB Length = 437 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 70 AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 +L+ GPP TGK+ LA V+ + F +++ S++ S + ++E L + Sbjct: 168 GILLYGPPGTGKSYLAKAVATE--ANSTFFSVSSSDLVSKWMGESEKLVK 215 >3PFI-A nrPDB Length = 338 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Query: 38 RPTS-EGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 RP++ +G +GQ ++ V + + +L +GP GKT LA +S + ++ Sbjct: 24 RPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSANI 83 Query: 97 PFTA 100 TA Sbjct: 84 KTTA 87 >5ZQM-A nrPDB Length = 309 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 5/40 (12%) Query: 55 GVILKMVQNGTIAG-----RAVLVAGPPSTGKTALAMGVS 89 V+L M G + VL+ GPP TGKT LA V+ Sbjct: 44 AVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVA 83 >6HE4-H nrPDB Length = 267 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEI 106 + VL+ GPP TGKT LA V+ F + GSE Sbjct: 54 KGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSEF 89 >6MAT-A nrPDB Length = 813 Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 3/55 (5%) Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFRKS 124 +L+ GPP GKT +A V+ + F +I G E+ + + ++E A+ Q F ++ Sbjct: 538 ILLWGPPGCGKTLVAKAVANESKAN--FISIKGPELLNKYVGESERAVRQLFSRA 590 >2CHV-A nrPDB Length = 319 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 71 VLVAGPPSTGKTALAMGVSQSL 92 +L +GPP TGKTA A+ +++ L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >3EIH-A nrPDB Length = 340 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%) Query: 70 AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 +L+ GPP TGK+ LA V+ + F +++ S++ S + ++E L + Sbjct: 71 GILLYGPPGTGKSYLAKAVATE--ANSTFFSVSSSDLVSKWMGESEKLVK 118 >5EQT-A nrPDB Length = 257 Score = 29.6 bits (65), Expect = 3.0, Method: Compositional matrix adjust. Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 18/88 (20%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFS-------------LELSKTE 115 + VL+ GPP GKT +A ++ + + F + GSE+ EL+K + Sbjct: 40 KGVLLYGPPGCGKTLMAKALAHEV--NATFIRVVGSELVRKYIGEGARLVHELFELAKEK 97 Query: 116 ALTQAF---RKSIGIKIKEETELIEGEV 140 A T F +IG K +ET E EV Sbjct: 98 APTIIFIDEIDAIGAKRMDETTGGEREV 125 >2CHG-A nrPDB Length = 226 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 71 VLVAGPPSTGKTALAMGVSQSL 92 +L +GPP TGKTA A+ +++ L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >2FVL-A nrPDB Length = 324 Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 6/51 (11%) Query: 348 LDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRY 398 L R +++ KSYNEQ I+ + + E +L+S+ + +L G+ + RY Sbjct: 262 LQRGVVVLAKSYNEQRIRENIQVF----EFQLTSEDMKVL--DGLNRNYRY 306 >4LGM-A nrPDB Length = 295 Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 R +L+ GPP GKT +A V+ + D F + + + S L + E Sbjct: 58 RGILLYGPPGCGKTMIAAAVANEI--DSIFMQLDAASVMSKWLGEAE 102 >3PVS-A nrPDB Length = 447 Score = 29.3 bits (64), Expect = 4.3, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 8/71 (11%) Query: 32 DENLQP-----RPTSEG-MVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALA 85 D QP RP + +GQ A + + ++ G + ++++ GPP TGKT LA Sbjct: 10 DNTFQPLAARMRPENLAQYIGQQHLLAAGKPLPRAIEAGHL--HSMILWGPPGTGKTTLA 67 Query: 86 MGVSQSLGKDV 96 +++ DV Sbjct: 68 EVIARYANADV 78 >6FVU-I nrPDB Length = 384 Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ G P TGKT LA V+ F I GSE+ L L + K Sbjct: 159 GIKPPKGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSELIQKYLGDGPRLCRQIFK 216 Query: 124 SIG 126 G Sbjct: 217 VAG 219 >5ZDH-A nrPDB Length = 646 Score = 28.9 bits (63), Expect = 4.7, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 24/131 (18%) Query: 92 LGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITG 151 +G+DVP + GS + S + + RK +GI +K ++ EG V++ I++ ++ Sbjct: 452 VGQDVPV--LTGSTVGS---NNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSK 506 Query: 152 -----------GHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKIT 200 G ++ K T+ D E I LG M D AG+ ++ G I Sbjct: 507 VEGQTSLDVVFGERKLKTTVLANDGELIV-LGGLMDDQ-------AGESVAKVPLLGDIP 558 Query: 201 KLGRSFARSRD 211 +G F + D Sbjct: 559 LIGNLFKSTAD 569 >3D8B-A nrPDB Length = 357 Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust. Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 7/71 (9%) Query: 56 VILKMVQNGTIAG-----RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLE 110 V+ M++ G + +L+ GPP TGKT + ++ G F +I+ S + S Sbjct: 100 VVWPMLRPDIFTGLRGPPKGILLFGPPGTGKTLIGKCIASQSGAT--FFSISASSLTSKW 157 Query: 111 LSKTEALTQAF 121 + + E + +A Sbjct: 158 VGEGEKMVRAL 168 >1IN6-A nrPDB Length = 334 Score = 28.9 bits (63), Expect = 5.2, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 35 LQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGK 94 L+P+ E +GQ ++ + L+ + VL+AGPP G+T LA ++ L Sbjct: 19 LRPKSLDE-FIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASELQT 77 Query: 95 DVPFTA 100 ++ T+ Sbjct: 78 NIHVTS 83 >6EF1-I nrPDB Length = 271 Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ G P TGKT LA V+ F I GSE+ L L + K Sbjct: 46 GIKPPKGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSELIQKYLGDGPRLCRQIFK 103 Query: 124 SIG 126 G Sbjct: 104 VAG 106 >1HQC-A nrPDB Length = 324 Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust. Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 1/69 (1%) Query: 33 ENLQPRP-TSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQS 91 E+L RP T + +GQ + ++ V L+ + +L+ GPP GKT LA ++ Sbjct: 2 EDLALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHE 61 Query: 92 LGKDVPFTA 100 LG ++ T+ Sbjct: 62 LGVNLRVTS 70 >4JQA-A nrPDB Length = 331 Score = 28.5 bits (62), Expect = 6.2, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 6/51 (11%) Query: 348 LDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRY 398 L R +++ KSYNEQ I+ Q E +L+S+ + + G+ ++RY Sbjct: 261 LQRGVVVLAKSYNEQRIRQ----NVQVFEFQLTSEEMKAI--DGLNRNVRY 305 >3JCP-I nrPDB Length = 437 Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ G P TGKT LA V+ F I GSE+ L L + K Sbjct: 212 GIKPPKGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSELIQKYLGDGPRLCRQIFK 269 Query: 124 SIG 126 G Sbjct: 270 VAG 272 >6B5D-A nrPDB Length = 309 Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust. Identities = 10/21 (47%), Positives = 17/21 (80%) Query: 69 RAVLVAGPPSTGKTALAMGVS 89 +A+++AGPP TGKT +A ++ Sbjct: 64 KAMVLAGPPGTGKTLIARAIA 84 >5W68-A nrPDB Length = 387 Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 16/127 (12%) Query: 92 LGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITG 151 +G+DVP + GS + S + + RK +GI +K ++ EG V++ I++ ++ Sbjct: 211 VGQDVPV--LTGSTVGS---NNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSK 265 Query: 152 GHKQ-------GKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGR 204 Q G+ +KTT + EL ++ GL ++ AG+ ++ G I +G Sbjct: 266 VEGQTSLDVVFGERKLKTTVLANDGEL--IVLGGLMDDQ--AGESVAKVPLLGDIPLIGN 321 Query: 205 SFARSRD 211 F + D Sbjct: 322 LFKSTAD 328 >6BLB-A nrPDB Length = 355 Score = 28.5 bits (62), Expect = 6.8, Method: Compositional matrix adjust. Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Query: 31 LDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQ 90 LD ++P ++ +GQ R + + + A L+ GPP GKT LA ++Q Sbjct: 23 LDRAIRPLKLAD-YIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQ 81 Query: 91 SLG 93 +G Sbjct: 82 EMG 84 >4NX8-A nrPDB Length = 293 Score = 28.5 bits (62), Expect = 7.1, Method: Compositional matrix adjust. Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%) Query: 58 LKMVQNGTIAGRAVL-VAGPPSTGKTALAM----GVSQSLGKDVPFTAIAGSEIFSLELS 112 L+M + T + +A+ VA P K +L + S L D+P T A + + +L+ Sbjct: 68 LRMSGSATFSPKALKEVAKPVKKNKASLYVFDLRQESHGLINDIPVTWYADRDWANADLN 127 Query: 113 KTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTI 160 EA+ + R +++ ++ + +E + TGGH+ +LT+ Sbjct: 128 HEEAVRRERRLLGDLRVGDKIGTTAIQSIETEESMIRTGGHQYVRLTV 175 >5Z6Q-A nrPDB Length = 392 Score = 28.5 bits (62), Expect = 7.4, Method: Compositional matrix adjust. Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAF 121 R +L+ GPP GKT LA V+ + F I+ + + S + + E L +A Sbjct: 152 RGLLLFGPPGNGKTMLAKAVAAE--SNATFFNISAASLTSKYVGEGEKLVRAL 202 >5WC0-A nrPDB Length = 472 Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust. Identities = 10/21 (47%), Positives = 17/21 (80%) Query: 69 RAVLVAGPPSTGKTALAMGVS 89 +A+++AGPP TGKT +A ++ Sbjct: 227 KAMVLAGPPGTGKTLIARAIA 247 >5A5B-M nrPDB Length = 434 Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 15/26 (57%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVS 89 G A + L+ GPP TGKT LA + Sbjct: 211 GIRAPKGALMYGPPGTGKTLLARACA 236 >5LKM-A nrPDB Length = 452 Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust. Identities = 14/47 (29%), Positives = 24/47 (51%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE 105 +++ G + G VL+ G P GK+ L + VS L + ++G E Sbjct: 79 RVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEE 125 >5JBJ-A nrPDB Length = 680 Score = 28.1 bits (61), Expect = 8.4, Method: Compositional matrix adjust. Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%) Query: 31 LDENLQPRPTSEGMVGQLQARRAAGVILKMVQN-GTIAGRAVLVAGPPSTGKTALAMGVS 89 L E+ QP +S G+V + R++A +L +Q+ + G+ + A +G + A G++ Sbjct: 362 LQEHFQPPGSSRGIVF-TKTRQSAHSLLSWLQDTAGLCGQHIRAAVLTGSGHSNQAKGMT 420 Query: 90 QSLGKDV 96 Q+ +DV Sbjct: 421 QNEQQDV 427 >1YGJ-A nrPDB Length = 312 Score = 28.1 bits (61), Expect = 8.8, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%) Query: 353 IITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLIS 404 IIT + E E+ T I +QEE +E+ +D+L G +T + SSNL+S Sbjct: 146 IITPNQF-EAELLTGRKIHSQEEALEV----MDMLHSMGPDTVVITSSNLLS 192 >5JM5-A nrPDB Length = 332 Score = 28.1 bits (61), Expect = 8.9, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 6/51 (11%) Query: 348 LDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRY 398 L R +++ KSYNEQ I+ Q E +L+++ D+ G++ +L Y Sbjct: 261 LQRGVVVLAKSYNEQRIRQ----NVQVFEFQLTAE--DMKAIDGLDRNLHY 305 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6GEJ-U nrPDB 720 0.0 6QI9-D nrPDB 691 0.0 4WW4-B nrPDB 688 0.0 6QI8-A nrPDB 659 0.0 5FM7-A nrPDB 634 0.0 6GEJ-T nrPDB 620 e-178 2XSZ-D nrPDB 347 9e-96 2XSZ-A nrPDB 338 2e-93 5OUN-A nrPDB 155 4e-38 2CQA-A nrPDB 117 1e-26 6CHS-H nrPDB 84 2e-16 Sequences not found previously or not previously below threshold: 3CF0-A nrPDB 75 7e-14 5C18-A nrPDB 74 1e-13 6MCK-A nrPDB 74 1e-13 5VC7-A nrPDB 63 2e-10 5G4G-A nrPDB 62 4e-10 2X8A-A nrPDB 61 1e-09 1XWI-A nrPDB 59 6e-09 2ZAO-A nrPDB 58 1e-08 6AP1-A nrPDB 57 1e-08 3EIH-A nrPDB 57 2e-08 5XMK-A nrPDB 57 2e-08 3HU1-A nrPDB 57 2e-08 6MAT-A nrPDB 55 6e-08 4D81-A nrPDB 54 2e-07 2R65-A nrPDB 53 3e-07 1LV7-A nrPDB 53 3e-07 3H4M-A nrPDB 52 4e-07 6B5C-A nrPDB 52 6e-07 5W0T-A nrPDB 51 1e-06 5UBV-A nrPDB 51 1e-06 4LCB-A nrPDB 51 1e-06 6EF0-L nrPDB 50 2e-06 5Z6Q-A nrPDB 50 2e-06 6EPC-H nrPDB 50 2e-06 6FVU-L nrPDB 50 2e-06 5ZQM-A nrPDB 50 3e-06 5WVI-L nrPDB 50 3e-06 5KWA-A nrPDB 50 3e-06 4Z8X-A nrPDB 50 3e-06 2CE7-A nrPDB 50 3e-06 4LGM-A nrPDB 50 3e-06 4L16-A nrPDB 49 3e-06 6EF1-K nrPDB 49 6e-06 5WVI-K nrPDB 49 6e-06 6HE9-H nrPDB 49 7e-06 5VHP-E nrPDB 49 7e-06 6HE4-H nrPDB 48 8e-06 3WHK-A nrPDB 48 9e-06 5VFU-A nrPDB 48 1e-05 5M32-h nrPDB 48 1e-05 5VHO-A nrPDB 48 1e-05 3D8B-A nrPDB 48 1e-05 6MSD-E nrPDB 48 1e-05 5E7P-A nrPDB 47 1e-05 5GJQ-J nrPDB 47 1e-05 6MSK-B nrPDB 47 1e-05 5VFP-B nrPDB 47 1e-05 5VHF-B nrPDB 47 2e-05 6EF0-H nrPDB 47 2e-05 5VHO-B nrPDB 47 2e-05 5VHP-C nrPDB 47 2e-05 2DHR-A nrPDB 47 2e-05 1IY1-A nrPDB 47 2e-05 6EF3-H nrPDB 47 2e-05 5EQT-A nrPDB 47 2e-05 6NYV-B nrPDB 47 2e-05 2QZ4-A nrPDB 46 3e-05 5VHN-D nrPDB 46 3e-05 1HQC-A nrPDB 46 3e-05 6AZ0-A nrPDB 46 3e-05 5VHO-F nrPDB 46 3e-05 5VFP-F nrPDB 46 4e-05 5T0C-AD nrPDB 46 4e-05 5A5B-M nrPDB 46 4e-05 6EPD-M nrPDB 45 5e-05 6EF0-M nrPDB 45 6e-05 6MDP-A nrPDB 45 6e-05 4XGU-A nrPDB 45 7e-05 1NJG-A nrPDB 45 9e-05 6FVU-I nrPDB 45 1e-04 3JCP-I nrPDB 45 1e-04 3GLF-B nrPDB 44 1e-04 5VQ9-D nrPDB 44 1e-04 6EF2-J nrPDB 44 1e-04 6EF1-I nrPDB 44 2e-04 3JCO-J nrPDB 44 2e-04 1IN6-A nrPDB 42 7e-04 6BLB-A nrPDB 41 9e-04 6B5D-A nrPDB 41 0.001 5WC0-A nrPDB 41 0.001 1SXJ-A nrPDB 40 0.002 4ZPX-A nrPDB 39 0.005 3GP8-A nrPDB 39 0.005 1D2N-A nrPDB 39 0.005 3K1J-A nrPDB 38 0.009 3M6A-A nrPDB 37 0.013 1SXJ-D nrPDB 37 0.015 1SXJ-C nrPDB 37 0.017 4NMN-A nrPDB 37 0.020 1FNN-A nrPDB 37 0.020 3PFI-A nrPDB 37 0.026 1IQP-A nrPDB 36 0.028 3ICE-A nrPDB 36 0.032 2CHG-A nrPDB 35 0.051 2GZA-A nrPDB 35 0.064 2W0M-A nrPDB 35 0.065 2CHV-A nrPDB 35 0.066 5LKM-A nrPDB 35 0.099 3PVS-A nrPDB 35 0.10 4I5O-A nrPDB 34 0.14 2R6A-A nrPDB 34 0.15 6EM8-A nrPDB 33 0.23 6AMN-A nrPDB 33 0.30 1R6B-X nrPDB 33 0.31 5VY8-A nrPDB 33 0.31 3CM0-A nrPDB 33 0.31 6EMW-E nrPDB 33 0.35 4LJ8-A nrPDB 33 0.35 1TAF-A nrPDB 33 0.35 5D4W-A nrPDB 32 0.43 1QVR-A nrPDB 32 0.71 3W34-A nrPDB 32 0.88 5M7N-A nrPDB 31 0.93 6QEL-G nrPDB 31 1.0 6EMW-B nrPDB 31 1.0 6G1K-A nrPDB 31 1.1 1XMS-A nrPDB 31 1.4 1OFI-A nrPDB 31 1.5 4YPL-A nrPDB 31 1.5 3QV2-A nrPDB 31 1.5 3H0K-A nrPDB 30 1.6 4YPN-A nrPDB 30 1.6 5BQ5-A nrPDB 30 1.7 4XGC-E nrPDB 30 1.7 2I3B-A nrPDB 30 1.8 1IM2-A nrPDB 30 1.8 1Y63-A nrPDB 30 1.9 5L3R-A nrPDB 30 2.2 3PXI-A nrPDB 30 2.3 2EEY-A nrPDB 30 2.3 6QUZ-B nrPDB 30 2.4 3BGW-A nrPDB 30 2.5 2Q6T-A nrPDB 30 2.8 1Y9Q-A nrPDB 30 2.9 1SGW-A nrPDB 30 2.9 3BH0-A nrPDB 30 2.9 4HSE-A nrPDB 30 3.0 6BPM-C nrPDB 30 3.1 1E94-E nrPDB 30 3.2 6ED3-A nrPDB 30 3.3 4M4W-J nrPDB 30 3.3 6E11-1 nrPDB 29 3.7 4EUN-A nrPDB 29 3.9 4Q7L-A nrPDB 29 4.0 2GP4-A nrPDB 29 5.2 2VIX-A nrPDB 29 5.3 1XP8-A nrPDB 29 5.3 6D00-1 nrPDB 29 5.5 4CIU-A nrPDB 28 6.1 3Q8X-B nrPDB 28 6.1 5OFO-C nrPDB 28 6.2 6IC4-I nrPDB 28 6.5 1JBK-A nrPDB 28 7.0 3J3U-A nrPDB 28 7.1 3SYK-A nrPDB 28 8.0 3PXG-A nrPDB 28 8.3 >6GEJ-U nrPDB Length = 471 Score = 720 bits (1858), Expect = 0.0, Method: Composition-based stats. Identities = 471/471 (100%), Positives = 471/471 (100%) Query: 1 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM 60 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM Sbjct: 1 MSIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM 60 Query: 61 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA Sbjct: 61 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 Query: 121 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT 180 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT Sbjct: 121 FRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLT 180 Query: 181 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS 240 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS Sbjct: 181 KEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVS 240 Query: 241 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM 300 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM Sbjct: 241 LHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHM 300 Query: 301 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN 360 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN Sbjct: 301 LDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYN 360 Query: 361 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV 420 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV Sbjct: 361 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV 420 Query: 421 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTTE 471 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTTE Sbjct: 421 EDVKRAYLLFLDSARSVKYVQENESQYIDDQGNVQISIAKSADPDAMDTTE 471 >6QI9-D nrPDB Length = 463 Score = 691 bits (1783), Expect = 0.0, Method: Composition-based stats. Identities = 306/448 (68%), Positives = 382/448 (85%), Gaps = 1/448 (0%) Query: 5 TSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNG 64 T+ E D+ + I AHSHI GLGLD+ L+PR S+GMVGQL ARRAAGV+L+M++ G Sbjct: 7 TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREG 66 Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKS 124 IAGRAVL+AG P TGKTA+AMG++Q+LG D PFTAIAGSEIFSLE+SKTEALTQAFR+S Sbjct: 67 KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRS 126 Query: 125 IGIKIKEETELIEGEVVEIQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIDGLTKEK 183 IG++IKEETE+IEGEVVEIQIDR TG G K GKLT+KTT+METIY+LG KMI+ LTK+K Sbjct: 127 IGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDK 186 Query: 184 VLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHE 243 V AGDVI+IDKA+GKI+KLGRSF R+RDYDAMG+ T+FVQCP+GELQKRK VVHTVSLHE Sbjct: 187 VQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHE 246 Query: 244 IDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDI 303 IDVINSRTQGFLALF+GDTGEI+SEVR+QIN KVAEW+EEGKAEI+PGVLFIDEVHMLDI Sbjct: 247 IDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDI 306 Query: 304 ECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYNEQE 363 E FSF+NRALE + AP+++MATNRG+++ RGT+Y+SPHG+P+DLLDR +I++T Y+E++ Sbjct: 307 ESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTTPYSEKD 366 Query: 364 IKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDV 423 K IL IR +EE+VE+S DA +LT+ G+ETSLRY+ LI+ A + KRK V+V+D+ Sbjct: 367 TKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDDI 426 Query: 424 KRAYLLFLDSARSVKYVQENESQYIDDQ 451 KR Y LFLD +RS +Y++E + ++ ++ Sbjct: 427 KRVYSLFLDESRSTQYMKEYQDAFLFNE 454 >4WW4-B nrPDB Length = 513 Score = 688 bits (1775), Expect = 0.0, Method: Composition-based stats. Identities = 334/453 (73%), Positives = 399/453 (88%), Gaps = 1/453 (0%) Query: 6 SDPNETSDLKSLSLIAAHSHITGLGLD-ENLQPRPTSEGMVGQLQARRAAGVILKMVQNG 64 + ET +L+ L+LIAAHSHI GLG+D + L+PRP+S+G+VGQ +AR+AA V+L+M++ G Sbjct: 32 TSVTETKELRGLNLIAAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAAVVLEMIKQG 91 Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKS 124 IAGRAVL+AGPPSTGKTA+AMG++QSLG+DVPFT +A SEIFSLE+SKTEALTQAFRKS Sbjct: 92 KIAGRAVLIAGPPSTGKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTEALTQAFRKS 151 Query: 125 IGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKV 184 IG++IKEE+E++EGEVVEIQIDRS+TGG KQGKLTIKTTDME IY++G+KMID +TKE+V Sbjct: 152 IGVRIKEESEIMEGEVVEIQIDRSVTGGAKQGKLTIKTTDMEAIYDMGSKMIDAMTKERV 211 Query: 185 LAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEI 244 +AGD+ISIDK+SGKITKLGRS+ARSRDYDAMG DT+F+QCPEGELQKRK VVHTVSLHEI Sbjct: 212 MAGDIISIDKSSGKITKLGRSYARSRDYDAMGVDTKFLQCPEGELQKRKEVVHTVSLHEI 271 Query: 245 DVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIE 304 DVINSRTQGFLALF+GDTGEIRSE+RDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIE Sbjct: 272 DVINSRTQGFLALFSGDTGEIRSEIRDQINTKVAEWKEEGKAEIVPGVLFIDEVHMLDIE 331 Query: 305 CFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIIITTKSYNEQEI 364 CFS+INRALE + APIV+MA+NRGVS+ RGT+YKSPHGLPLD LDR +II T Y E+ Sbjct: 332 CFSYINRALESDLAPIVIMASNRGVSRIRGTDYKSPHGLPLDFLDRVVIINTHPYTPDEL 391 Query: 365 KTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEVEDVK 424 + ILSIRAQEEEV+L+ DAL LLTK G E LRY+SNLI+ +Q IA KR+ V VEDV+ Sbjct: 392 RQILSIRAQEEEVDLTPDALALLTKIGQEAGLRYASNLITTSQLIAAKRRAKQVGVEDVQ 451 Query: 425 RAYLLFLDSARSVKYVQENESQYIDDQGNVQIS 457 R++ LF D ARSV++VQE+E + I + G V S Sbjct: 452 RSFKLFYDPARSVRFVQESEKRLIGNDGVVDFS 484 >6QI8-A nrPDB Length = 456 Score = 659 bits (1700), Expect = 0.0, Method: Composition-based stats. Identities = 191/458 (41%), Positives = 285/458 (62%), Gaps = 20/458 (4%) Query: 7 DPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTI 66 E IA+HSH+ GLGLDE+ + + G+VGQ AR A GVI++++++ + Sbjct: 2 KIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKM 61 Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIG 126 AGRAVL+AGPP TGKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++IG Sbjct: 62 AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIG 121 Query: 127 IKIKEETELIEGEVVEIQI--DRSITGGHKQGK------LTIKTTDMETIYELGNKMIDG 178 ++IKE E+ EGEV E+ + GG+ GK + +KT +L + + Sbjct: 122 LRIKETKEVYEGEVTELTPCETENPMGGY--GKTISHVIIGLKTAKGTKQLKLDPSIFES 179 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHT 238 L KE+V AGDVI I+ SG + + GR + ++D + +V P+G++ K+K ++ Sbjct: 180 LQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEE--YVPLPKGDVHKKKEIIQD 237 Query: 239 VSLHEIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPG 291 V+LH++DV N+R QG L EI ++R +IN V ++ ++G AE+VPG Sbjct: 238 VTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPG 297 Query: 292 VLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDR 350 VLF+DEVHMLDIECF++++RALE APIV+ A+NRG RGT + SPHG+PLDLLDR Sbjct: 298 VLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDR 357 Query: 351 SIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIA 410 +II T Y QE+K I+ IRAQ E + +S +AL+ L + G +T+LRYS L++ A +A Sbjct: 358 VMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLA 417 Query: 411 MKRKNNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 +++E E V+ LF D+ S K + + + +Y+ Sbjct: 418 KINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 455 >5FM7-A nrPDB Length = 464 Score = 634 bits (1635), Expect = 0.0, Method: Composition-based stats. Identities = 179/453 (39%), Positives = 270/453 (59%), Gaps = 20/453 (4%) Query: 7 DPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTI 66 +E AAH+HI GLGL+ + + G VGQ AR A GV++ +++ + Sbjct: 5 QISEVRGNTRDHRTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGVVVDLIKAHKM 64 Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIG 126 AGR VL+AG P TGKTALA+ +SQ LG +PF I GSEI+S E+ KTE L + FR++IG Sbjct: 65 AGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEVLMENFRRAIG 124 Query: 127 IKIKEETELIEGEVVEIQID--RSITGGHKQGK------LTIKTTDMETIYELGNKMIDG 178 ++++E ++ EGEV E+ + + GG+ GK + +K+ + L + + Sbjct: 125 LRVRETKDVYEGEVTEMTPEEAENPLGGY--GKTISTLLIGLKSARGQKKLRLDPSIYEA 182 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHT 238 + KE+V GDVI I+ +G ++GRS A + ++D + +V P+GE+ K+K +V Sbjct: 183 IQKERVQVGDVIYIETNTGACKRVGRSDAYATEFDLEAEE--YVPIPKGEVHKKKEIVQD 240 Query: 239 VSLHEIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPG 291 V+LH++DV N+R QG L EI ++R +IN V ++ +G AE++PG Sbjct: 241 VTLHDLDVANARPQGGQDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGVAELIPG 300 Query: 292 VLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDR 350 VLFIDE HMLDIECF+++N+ALE APIV++A+NRG++ RG + K+ HG+P D L R Sbjct: 301 VLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIPPDFLQR 360 Query: 351 SIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIA 410 +II T Y EI+ I+ IRAQ E V+L+ A+D + + GV SLRY L++ A +A Sbjct: 361 LLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLAPASILA 420 Query: 411 MKRKNNTVEVEDVKRAYLLFLDSARSVKYVQEN 443 V+V+D+ A LFLD+ RS + Sbjct: 421 RVNGRTQVDVQDIAEAEELFLDARRSANILTST 453 >6GEJ-T nrPDB Length = 463 Score = 620 bits (1600), Expect = e-178, Method: Composition-based stats. Identities = 189/454 (41%), Positives = 291/454 (64%), Gaps = 21/454 (4%) Query: 11 TSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRA 70 +S+ +++ AAH+HI GLGLDE+ + G VGQ++AR A GVI+ +++ ++GRA Sbjct: 15 SSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRA 74 Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIK 130 +L+AG PSTGKTALA+ +SQ LG VPF + GSE++S+E+ KTE L + FR++IG++IK Sbjct: 75 ILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIK 134 Query: 131 EETELIEGEVVEIQID--RSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKE 182 E E+ EGEV E+ + + GG+ GK + +K+ L + + + +E Sbjct: 135 ETKEVYEGEVTELTPEDAENPLGGY--GKTISHVIVGLKSAKGTKTLRLDPTIYESIQRE 192 Query: 183 KVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLH 242 KV GDVI I+ +G + ++GRS A + ++D + +V P+GE+ K+K +V V+LH Sbjct: 193 KVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEE--YVPLPKGEVHKKKEIVQDVTLH 250 Query: 243 EIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFI 295 ++DV N+R QG L EI ++R ++N VA++ ++G AE++PGVLFI Sbjct: 251 DLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFI 310 Query: 296 DEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIII 354 DEV+MLDIE F+++N+ALE AP+V++A+NRG++ RGT + SPHG+P DL+DR +I+ Sbjct: 311 DEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIV 370 Query: 355 TTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRK 414 T Y++ EI+TI+ RA E +++ S ALDLL G ETSLRY+ L++ +A Sbjct: 371 RTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSN 430 Query: 415 NNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 + V DV A LLFLD+ RS K + E + Y+ Sbjct: 431 RKEIVVNDVNEAKLLFLDAKRSTKIL-ETSANYL 463 >2XSZ-D nrPDB Length = 378 Score = 347 bits (889), Expect = 9e-96, Method: Composition-based stats. Identities = 139/217 (64%), Positives = 183/217 (84%) Query: 235 VVHTVSLHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLF 294 VVHTVSLHEIDVINSRTQGFLALF+GDTGEI+SEVR+QIN KVAEW+EEGKAEI+PGVLF Sbjct: 153 VVHTVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLF 212 Query: 295 IDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNYKSPHGLPLDLLDRSIII 354 IDEVHMLDIE FSF+NRALE + AP+++MATNRG+++ RGT+Y+SPHG+P+DLLDR +I+ Sbjct: 213 IDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIV 272 Query: 355 TTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRK 414 +T Y+E++ K IL IR +EE+VE+S DA +LT+ G+ETSLRY+ LI+ A + KRK Sbjct: 273 STTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRK 332 Query: 415 NNTVEVEDVKRAYLLFLDSARSVKYVQENESQYIDDQ 451 V+V+D+KR Y LFLD +RS +Y++E + ++ ++ Sbjct: 333 GTEVQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNE 369 Score = 206 bits (523), Expect = 3e-53, Method: Composition-based stats. Identities = 87/127 (68%), Positives = 106/127 (83%) Query: 5 TSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNG 64 T+ E D+ + I AHSHI GLGLD+ L+PR S+GMVGQL ARRAAGV+L+M++ G Sbjct: 22 TTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREG 81 Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKS 124 IAGRAVL+AG P TGKTA+AMG++Q+LG D PFTAIAGSEIFSLE+SKTEALTQAFR+S Sbjct: 82 KIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRS 141 Query: 125 IGIKIKE 131 IG++IKE Sbjct: 142 IGVRIKE 148 >2XSZ-A nrPDB Length = 367 Score = 338 bits (868), Expect = 2e-93, Method: Composition-based stats. Identities = 97/222 (43%), Positives = 143/222 (64%), Gaps = 8/222 (3%) Query: 235 VVHTVSLHEIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAE 287 ++ V+LH++DV N+R QG L EI ++R +IN V ++ ++G AE Sbjct: 145 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 204 Query: 288 IVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLD 346 +VPGVLF+DEVHMLDIECF++++RALE APIV+ A+NRG RGT + SPHG+PLD Sbjct: 205 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 264 Query: 347 LLDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVA 406 LLDR +II T Y QE+K I+ IRAQ E + +S +AL+ L + G +T+LRYS L++ A Sbjct: 265 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 324 Query: 407 QQIAMKRKNNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 +A +++E E V+ LF D+ S K + + + +Y+ Sbjct: 325 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQDKYM 366 Score = 197 bits (501), Expect = 8e-51, Method: Composition-based stats. Identities = 62/126 (49%), Positives = 88/126 (69%) Query: 6 SDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGT 65 S E IA+HSH+ GLGLDE+ + + G+VGQ AR A GVI++++++ Sbjct: 15 SKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK 74 Query: 66 IAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSI 125 +AGRAVL+AGPP TGKTALA+ ++Q LG VPF + GSE++S E+ KTE L + FR++I Sbjct: 75 MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI 134 Query: 126 GIKIKE 131 G++IKE Sbjct: 135 GLRIKE 140 >5OUN-A nrPDB Length = 107 Score = 155 bits (392), Expect = 4e-38, Method: Composition-based stats. Identities = 103/103 (100%), Positives = 103/103 (100%) Query: 132 ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS 191 ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS Sbjct: 5 ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVIS 64 Query: 192 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT 234 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT Sbjct: 65 IDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT 107 >2CQA-A nrPDB Length = 95 Score = 117 bits (293), Expect = 1e-26, Method: Composition-based stats. Identities = 64/88 (72%), Positives = 75/88 (85%), Gaps = 1/88 (1%) Query: 130 KEETELIEGEVVEIQIDRSITG-GHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGD 188 KEETE+IEGEVVEIQIDR TG G K GKLT+KTT+METIY+LG KMI+ LTK+KV AGD Sbjct: 8 KEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIESLTKDKVQAGD 67 Query: 189 VISIDKASGKITKLGRSFARSRDYDAMG 216 VI+IDKA+GKI+KLGRSF R+R + G Sbjct: 68 VITIDKATGKISKLGRSFTRARSGPSSG 95 >6CHS-H nrPDB Length = 819 Score = 83.6 bits (205), Expect = 2e-16, Method: Composition-based stats. Identities = 59/256 (23%), Positives = 98/256 (38%), Gaps = 41/256 (16%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-L 117 K ++ G R VL GPP TGKT LA V+ + F ++ G E+ S+ ++E+ + Sbjct: 519 KFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN--FISVKGPELLSMWFGESESNI 576 Query: 118 TQAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMID 177 F K+ + + E+ I R G G + + +D Sbjct: 577 RDIFDKA---RAAAPCVVFLDELDSIAKAR----GGSIGDAGGASDRVVNQL---LTEMD 626 Query: 178 GLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPE--GELQ----- 230 G+T +K + + A+ + +L + R D +V P+ G L Sbjct: 627 GMTSKKN-----VFVIGATNRPEQLDPALCRPGRLD----QLIYVPLPDEAGRLSILKAQ 677 Query: 231 -KRKTVVHTVSLHEIDVINSRTQGFLALFTGDTGEIRSE-VRDQINTKVAEWKEEGKAEI 288 ++ V V ++ I S+T GF D I V+ I +A E KA Sbjct: 678 LRKTPVSKDV---DLAYIASKTHGFSG---ADLAFITQRAVKLAIKESIAAEIERQKARE 731 Query: 289 VPGVLFIDEVHMLDIE 304 G ++V+M D E Sbjct: 732 AAG----EDVNMEDDE 743 Score = 58.5 bits (140), Expect = 6e-09, Method: Composition-based stats. Identities = 31/95 (32%), Positives = 40/95 (42%), Gaps = 16/95 (16%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G R VL+ GPP TGKT +A V+ G F I G EI S ++E+ RK Sbjct: 250 GIKPPRGVLLYGPPGTGKTLMARAVANETGA--FFFLINGPEIMSKMAGESES---NLRK 304 Query: 124 SIGIKIKEETE------LIEGEVVEIQIDRSITGG 152 + EE E + E+ I R T G Sbjct: 305 AF-----EEAEKNSPAIIFIDEIDSIAPKREKTNG 334 >3CF0-A nrPDB Length = 301 Score = 74.7 bits (182), Expect = 7e-14, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-L 117 K ++ G + VL GPP GKT LA ++ + F +I G E+ ++ ++EA + Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEANV 97 Query: 118 TQAFRKS 124 + F K+ Sbjct: 98 REIFDKA 104 >5C18-A nrPDB Length = 785 Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-L 117 K ++ G + VL GPP GKT LA ++ + F +I G E+ ++ ++EA + Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEANV 558 Query: 118 TQAFRKS 124 + F K+ Sbjct: 559 REIFDKA 565 Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G R +L+ GPP TGKT +A V+ G F I G EI S ++E+ RK Sbjct: 233 GVKPPRGILLYGPPGTGKTLIARAVANETGA--FFFLINGPEIMSKLAGESES---NLRK 287 Query: 124 SIGIKIKEETE------LIEGEVVEIQIDRSITGGHKQGKL 158 + EE E + E+ I R T G + ++ Sbjct: 288 AF-----EEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI 323 >6MCK-A nrPDB Length = 606 Score = 74.3 bits (181), Expect = 1e-13, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 3/67 (4%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-L 117 K ++ G + VL GPP GKT LA ++ + F +I G E+ ++ ++EA + Sbjct: 294 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEANV 351 Query: 118 TQAFRKS 124 + F K+ Sbjct: 352 REIFDKA 358 Score = 57.0 bits (136), Expect = 2e-08, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G R +L+ GPP TGKT +A V+ G F I G EI S ++E+ RK Sbjct: 26 GVKPPRGILLYGPPGTGKTLIARAVANETGA--FFFLINGPEIMSKLAGESES---NLRK 80 Query: 124 SIGIKIKEETE------LIEGEVVEIQIDRSITGGHKQGKL 158 + EE E + E+ I R T G + ++ Sbjct: 81 AF-----EEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI 116 >5VC7-A nrPDB Length = 564 Score = 63.2 bits (152), Expect = 2e-10, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 29/201 (14%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALT 118 + G + L+ GPP GKT LA V+ + F +I G E+ S + ++E A+ Sbjct: 312 FKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--SNANFISIKGPEVLSKWVGESEKAIR 369 Query: 119 QAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 + F+K+ + + E+ I R T+D + N+++ Sbjct: 370 EIFKKAKQV---APAIVFLDEIDSIAPRRGT------------TSDSGVTERIVNQLLTS 414 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHT 238 L +V+ G V+ A+ + + + R+ +D ++ P+ E + VHT Sbjct: 415 LDGIEVMNGVVVI--GATNRPDIMDPALLRAGRFD----KLIYIPPPDKEARLSILKVHT 468 Query: 239 VSLH-----EIDVINSRTQGF 254 ++ +++ I RT+G+ Sbjct: 469 KNMPLAPDVDLNDIAQRTEGY 489 Score = 58.9 bits (141), Expect = 5e-09, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQA 120 + G + V++ GPP TGKT +A V+ G + F +I G EI S ++E L + Sbjct: 37 RLGITPPKGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREI 94 Query: 121 FRKSIGIKIKEETE---LIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMID 177 F K+ EET + E+ I R G + ++ + ++D Sbjct: 95 FSKA------EETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLL----------TLMD 138 Query: 178 GLTKEK---VLAGDVISIDKASGKITKLGRSF 206 G+ KE+ ++ G ID + + GR Sbjct: 139 GM-KERGHVIVIGATNRIDAIDPALRRPGRFD 169 >5G4G-A nrPDB Length = 721 Score = 62.4 bits (150), Expect = 4e-10, Method: Composition-based stats. Identities = 42/201 (20%), Positives = 84/201 (41%), Gaps = 29/201 (14%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALT 118 + G + L+ GPP GKT LA V+ + F +I G E+ S + ++E A+ Sbjct: 488 FKRLGIRPSKGFLLYGPPGVGKTLLAKAVATE--SNANFISIKGPEVLSKWVGESEKAIR 545 Query: 119 QAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 + F+K+ + + E+ I R T+D + N+++ Sbjct: 546 EIFKKAKQV---APAIVFLDEIDSIAPRRGT------------TSDSGVTERIVNQLLTS 590 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHT 238 L +V+ G V+ A+ + + + R+ +D ++ P+ E + VHT Sbjct: 591 LDGIEVMNGVVVI--GATNRPDIMDPALLRAGRFD----KLIYIPPPDKEARLSILKVHT 644 Query: 239 VSLH-----EIDVINSRTQGF 254 ++ +++ I RT+G+ Sbjct: 645 KNMPLAPDVDLNDIAQRTEGY 665 Score = 57.8 bits (138), Expect = 9e-09, Method: Composition-based stats. Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA-LTQA 120 + G + V++ GPP TGKT +A V+ G + F +I G EI S ++E L + Sbjct: 213 RLGITPPKGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREI 270 Query: 121 FRKSIGIKIKEETE---LIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMID 177 F K+ EET + E+ I R G + ++ + ++D Sbjct: 271 FSKA------EETAPSIIFIDEIDSIAPKREEVQGEVERRVVAQLL----------TLMD 314 Query: 178 GLTKEK---VLAGDVISIDKASGKITKLGRSF 206 G+ KE+ ++ G ID + + GR Sbjct: 315 GM-KERGHVIVIGATNRIDAIDPALRRPGRFD 345 >2X8A-A nrPDB Length = 274 Score = 61.2 bits (147), Expect = 1e-09, Method: Composition-based stats. Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALTQAFR 122 G + VL+AGPP GKT LA V+ G + F ++ G E+ ++ + ++E A+ Q F+ Sbjct: 40 GLVTPAGVLLAGPPGCGKTLLAKAVANESGLN--FISVKGPELLNMYVGESERAVRQVFQ 97 Query: 123 KS 124 ++ Sbjct: 98 RA 99 >1XWI-A nrPDB Length = 322 Score = 58.5 bits (140), Expect = 6e-09, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Query: 42 EGMVGQLQARRAA--GVIL-----KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGK 94 + G A+ A VIL + R +L+ GPP TGK+ LA V+ Sbjct: 12 SDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATE-AN 70 Query: 95 DVPFTAIAGSEIFSLELSKTEALTQAF 121 + F +I+ S++ S L ++E L + Sbjct: 71 NSTFFSISSSDLVSKWLGESEKLVKNL 97 >2ZAO-A nrPDB Length = 444 Score = 57.8 bits (138), Expect = 1e-08, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Query: 42 EGMVGQLQARRAA--GVIL-----KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGK 94 + G A+ A VIL + R +L+ GPP TGK+ LA V+ Sbjct: 134 SDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATE-AN 192 Query: 95 DVPFTAIAGSEIFSLELSKTEALTQAF 121 + F +I+ S++ S L ++E L + Sbjct: 193 NSTFFSISSSDLVSKWLGESEKLVKNL 219 >6AP1-A nrPDB Length = 519 Score = 57.4 bits (137), Expect = 1e-08, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 23/150 (15%) Query: 42 EGMVGQLQA-RRAAGVILKM---VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVP 97 G+ G +A + A + +K + +L+ GPP TGK+ LA V+ + Sbjct: 37 AGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATE--ANST 94 Query: 98 FTAIAGSEIFSLELSKTEALTQAF-------RKSI----------GIKIKEETELIEGEV 140 F +++ S++ S + ++E L + + SI G + + E+E Sbjct: 95 FFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIK 154 Query: 141 VEIQIDRSITGGHKQGKLTIKTTDMETIYE 170 E+ + + G QG L + T++ + Sbjct: 155 TELLVQMNGVGNDSQGVLVLGATNIPWQLD 184 >3EIH-A nrPDB Length = 340 Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 23/150 (15%) Query: 42 EGMVG-QLQARRAAGVILKM---VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVP 97 G+ G + + A + +K + +L+ GPP TGK+ LA V+ + Sbjct: 39 AGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATE--ANST 96 Query: 98 FTAIAGSEIFSLELSKTEALTQAF-------RKSI----------GIKIKEETELIEGEV 140 F +++ S++ S + ++E L + + SI G + + E+E Sbjct: 97 FFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRGEGESEASRRIK 156 Query: 141 VEIQIDRSITGGHKQGKLTIKTTDMETIYE 170 E+ + + G QG L + T++ + Sbjct: 157 TELLVQMNGVGNDSQGVLVLGATNIPWQLD 186 >5XMK-A nrPDB Length = 437 Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats. Identities = 30/150 (20%), Positives = 61/150 (40%), Gaps = 23/150 (15%) Query: 42 EGMVG-QLQARRAAGVILKM---VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVP 97 G+ G + + A + +K + +L+ GPP TGK+ LA V+ + Sbjct: 136 AGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATE--ANST 193 Query: 98 FTAIAGSEIFSLELSKTEALTQAF-------RKSI----------GIKIKEETELIEGEV 140 F +++ S++ S + ++E L + + SI G + + E+E Sbjct: 194 FFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDQVDALTGTRGEGESEASRRIK 253 Query: 141 VEIQIDRSITGGHKQGKLTIKTTDMETIYE 170 E+ + + G QG L + T++ + Sbjct: 254 TELLVQMNGVGNDSQGVLVLGATNIPWQLD 283 >3HU1-A nrPDB Length = 489 Score = 56.6 bits (135), Expect = 2e-08, Method: Composition-based stats. Identities = 30/101 (29%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G R +L+ GPP TGKT +A V+ G F I G EI S ++E+ RK Sbjct: 234 GVKPPRGILLYGPPGTGKTLIARAVANETGA--FFFLINGPEIMSKLAGESES---NLRK 288 Query: 124 SIGIKIKEETE------LIEGEVVEIQIDRSITGGHKQGKL 158 + EE E + E+ I R T G + ++ Sbjct: 289 AF-----EEAEKNAPAIIFIDELDAIAPKREKTHGEVERRI 324 >6MAT-A nrPDB Length = 813 Score = 55.1 bits (131), Expect = 6e-08, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 3/66 (4%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALT 118 + G +L+ GPP GKT +A V+ F +I G E+ + + ++E A+ Sbjct: 527 FTRVGIKPAAGILLWGPPGCGKTLVAKAVANE--SKANFISIKGPELLNKYVGESERAVR 584 Query: 119 QAFRKS 124 Q F ++ Sbjct: 585 QLFSRA 590 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 2/54 (3%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 + G VL+ GP GKT LA ++ S+G V F ++ + ++E Sbjct: 230 KMGYRYDNGVLLHGPSGCGKTTLAHAIAGSIG--VAFIPVSAPSVIGGTSGESE 281 >4D81-A nrPDB Length = 283 Score = 53.5 bits (127), Expect = 2e-07, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 44/106 (41%), Gaps = 8/106 (7%) Query: 37 PRPTSEGMVGQLQARRAA--GVILKMVQNGTIA---GRAVLVAGPPSTGKTALAMGVSQS 91 P+ T +VG + A V+ + R +L+ GPP GKT +A V+ Sbjct: 9 PKVTLNEIVGLEDVKEALKEAVVYPSKRPDLFPLGWPRGILLYGPPGCGKTMIAAAVANE 68 Query: 92 LGKDVPFTAIAGSEIFSLELSKTE-ALTQAFRKSIGIKIKEETELI 136 L D F + + I S L + E + + F+ + + KE I Sbjct: 69 L--DSEFIHVDAASIMSKWLGEAEKNVAKIFKTARELSKKENKPAI 112 >2R65-A nrPDB Length = 268 Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats. Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%) Query: 44 MVGQLQARRAAGVILKMVQN-------GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 M G +A+ I+ ++ G + VL+ GPP TGKT LA V+ V Sbjct: 13 MAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGE--AHV 70 Query: 97 PFTAIAGSEIFSLELS 112 PF ++ GS + + Sbjct: 71 PFFSMGGSSFIEMFVG 86 >1LV7-A nrPDB Length = 257 Score = 52.8 bits (125), Expect = 3e-07, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 11/83 (13%) Query: 38 RPTSEGMVGQLQARRAAGVILKMVQN--------GTIAGRAVLVAGPPSTGKTALAMGVS 89 + T + G +A+ +++ ++ G I + VL+ GPP TGKT LA ++ Sbjct: 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIP-KGVLMVGPPGTGKTLLAKAIA 66 Query: 90 QSLGKDVPFTAIAGSEIFSLELS 112 VPF I+GS+ + + Sbjct: 67 GE--AKVPFFTISGSDFVEMFVG 87 >3H4M-A nrPDB Length = 285 Score = 52.4 bits (124), Expect = 4e-07, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 75/184 (40%), Gaps = 14/184 (7%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAF 121 + G + +L+ GPP TGKT LA V+ + F + GSE+ + + +L + Sbjct: 45 KVGIEPPKGILLYGPPGTGKTLLAKAVATE--TNATFIRVVGSELVKKFIGEGASLVKDI 102 Query: 122 RKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTK 181 K K + E + + + ++TGG ++ + T+ M+ + E+ D Sbjct: 103 FKLAKEKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTL----MQLLAEMDG--FDARGD 156 Query: 182 EKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRK-TVVHTVS 240 K+ G D I + GR F R + A R ++ RK + V+ Sbjct: 157 VKI-IGATNRPDILDPAILRPGR-FDRIIEVPAPDEKGRLEIL---KIHTRKMNLAEDVN 211 Query: 241 LHEI 244 L EI Sbjct: 212 LEEI 215 >6B5C-A nrPDB Length = 307 Score = 52.0 bits (123), Expect = 6e-07, Method: Composition-based stats. Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT 118 + + VL+ GPP TGKT LA V+ G F ++ S + S ++E L Sbjct: 49 DFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLV 106 Query: 119 Q 119 + Sbjct: 107 R 107 >5W0T-A nrPDB Length = 304 Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 A VL+ GPP GKT LA +++ G + F +I S I ++ + A Sbjct: 76 APSGVLLYGPPGCGKTMLAKALAKESGAN--FISIRMSSIMDKWYGESNKIVDA 127 >5UBV-A nrPDB Length = 246 Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 11/75 (14%) Query: 46 GQLQARRAAGVILKMVQN--------GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVP 97 G +A+ +++ ++N G + + VL+ GPP TGKT LA V+ G VP Sbjct: 10 GCDEAKEELQELVEFLRNPEKFSNLGGKLP-KGVLLVGPPGTGKTLLARAVAGEAG--VP 66 Query: 98 FTAIAGSEIFSLELS 112 F ++GSE + + Sbjct: 67 FFYMSGSEFDEIYVG 81 >4LCB-A nrPDB Length = 367 Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats. Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 R +L+ GPP GKT LA V+ + D F + + I S L + E Sbjct: 131 RGILLYGPPGNGKTMLAAAVANEI--DSYFIHVDAASIMSKWLGEAE 175 >6EF0-L nrPDB Length = 273 Score = 50.4 bits (119), Expect = 2e-06, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 + G + VL+ GPP TGKT LA V+ ++G + F+ +G Sbjct: 44 FQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 87 >5Z6Q-A nrPDB Length = 392 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 9/85 (10%) Query: 44 MVGQLQARRAAGVIL-------KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 + GQ A++A I+ ++ R +L+ GPP GKT LA V+ + Sbjct: 120 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE--SNA 177 Query: 97 PFTAIAGSEIFSLELSKTEALTQAF 121 F I+ + + S + + E L +A Sbjct: 178 TFFNISAASLTSKYVGEGEKLVRAL 202 >6EPC-H nrPDB Length = 433 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 + V G + VL+ GPP TGKT A V+ D F + GSE+ + + Sbjct: 200 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR--TDACFIPVIGSELVQKYVGE 252 >6FVU-L nrPDB Length = 388 Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 + G + VL+ GPP TGKT LA V+ ++G + F+ +G Sbjct: 159 FQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 202 >5ZQM-A nrPDB Length = 309 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 2/61 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT 118 + + + VL+ GPP TGKT LA V+ F ++ S + S ++E L Sbjct: 53 EFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLV 110 Query: 119 Q 119 + Sbjct: 111 R 111 >5WVI-L nrPDB Length = 437 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 25/44 (56%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 + G + VL+ GPP TGKT LA V+ ++G + F+ +G Sbjct: 207 FQRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 250 >5KWA-A nrPDB Length = 497 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 13/62 (20%) Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLGKDVP-------------FTAIAGSEIFSLELSK 113 + VL+ GPP GKT +A V+ SL K + F I G E+ + + + Sbjct: 180 PPKGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGE 239 Query: 114 TE 115 TE Sbjct: 240 TE 241 >4Z8X-A nrPDB Length = 497 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 58 LKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 +K + G + VL+ G P GKT LA ++ VPF +++GS+ + + Sbjct: 41 VKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGE--AHVPFISVSGSDFVEMFVG 93 >2CE7-A nrPDB Length = 476 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 9/86 (10%) Query: 34 NLQPRPTSEGMVGQLQARRAAGVILKMVQ----NGTIAGR---AVLVAGPPSTGKTALAM 86 + R T + + G +A +++ ++ I R +L+ GPP TGKT LA Sbjct: 8 SGNKRVTFKDVGGAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLAR 67 Query: 87 GVSQSLGKDVPFTAIAGSEIFSLELS 112 V+ +VPF I+GS+ L + Sbjct: 68 AVAGE--ANVPFFHISGSDFVELFVG 91 >4LGM-A nrPDB Length = 295 Score = 49.7 bits (117), Expect = 3e-06, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE 115 R +L+ GPP GKT +A V+ + D F + + + S L + E Sbjct: 58 RGILLYGPPGCGKTMIAAAVANEI--DSIFMQLDAASVMSKWLGEAE 102 >4L16-A nrPDB Length = 334 Score = 49.3 bits (116), Expect = 3e-06, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%) Query: 65 TIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAF 121 + VL+ GPP TGKT + V+ F I+ S + S + + E L +A Sbjct: 86 RAPPKGVLLFGPPGTGKTMIGRCVASQC--KATFFNISASSLTSKWVGEGEKLVRAL 140 >6EF1-K nrPDB Length = 276 Score = 48.5 bits (114), Expect = 6e-06, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 Q G R VL+ GPP TGKT L V+ S F + GSE L + Sbjct: 48 QIGIDPPRGVLLYGPPGTGKTMLVKAVANS--TKAAFIRVNGSEFVHKYLGE 97 >5WVI-K nrPDB Length = 428 Score = 48.5 bits (114), Expect = 6e-06, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 Q G R VL+ GPP TGKT L V+ S F + GSE L + Sbjct: 200 QIGIDPPRGVLLYGPPGTGKTMLVKAVANS--TKAAFIRVNGSEFVHKYLGE 249 >6HE9-H nrPDB Length = 390 Score = 48.5 bits (114), Expect = 7e-06, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 16/187 (8%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT- 118 + G + VL+ GPP TGKT LA V+ F + GSE + + L Sbjct: 159 FAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSEFVQKYIGEGARLVR 216 Query: 119 QAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 + F+ + K K + + E+ I R T G ++ T M+ + EL D Sbjct: 217 EVFQLA---KEKAPSIIFIDELDAIAARR--TNSDTSGDREVQRTMMQLLAELDG--FDP 269 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRK-TVVH 237 KV G ID I + GR F R + + R +Q + + RK + Sbjct: 270 RGDVKV-IGATNRIDILDPAILRPGR-FDRIIEVPLPTFEGR-IQIFK--IHTRKMKLAE 324 Query: 238 TVSLHEI 244 V E+ Sbjct: 325 DVDFKEL 331 >5VHP-E nrPDB Length = 262 Score = 48.5 bits (114), Expect = 7e-06, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 + G I + L+ GPP TGKT LA V+ L D F + S I + ++ L + Sbjct: 32 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSIVDKYIGESARLIR 89 >6HE4-H nrPDB Length = 267 Score = 48.1 bits (113), Expect = 8e-06, Method: Composition-based stats. Identities = 47/187 (25%), Positives = 72/187 (38%), Gaps = 16/187 (8%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT- 118 + G + VL+ GPP TGKT LA V+ F + GSE + + L Sbjct: 45 FAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSEFVQKYIGEGARLVR 102 Query: 119 QAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 + F+ + K K + + E+ I R T G ++ T M+ + EL D Sbjct: 103 EVFQLA---KEKAPSIIFIDELDAIAARR--TNSDTSGDREVQRTMMQLLAELDG--FDP 155 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRK-TVVH 237 KV G ID I + GR F R + + R +Q + + RK + Sbjct: 156 RGDVKV-IGATNRIDILDPAILRPGR-FDRIIEVPLPTFEGR-IQIFK--IHTRKMKLAE 210 Query: 238 TVSLHEI 244 V E+ Sbjct: 211 DVDFKEL 217 >3WHK-A nrPDB Length = 270 Score = 48.1 bits (113), Expect = 9e-06, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Query: 42 EGMVGQLQA-RRAAGVILK----MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 G+ QLQ R A + LK + G + VL+ GPP GKT +A ++ + + Sbjct: 20 GGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKAIAHEV--NA 77 Query: 97 PFTAIAGSEIFSLELSKTEALTQ 119 F + GSE+ + + L Sbjct: 78 TFIRVVGSELVRKYIGEGARLVH 100 >5VFU-A nrPDB Length = 361 Score = 47.7 bits (112), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 + V G + VL+ GPP TGKT A V+ D F + GSE+ + + Sbjct: 128 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSELVQKYVGE 180 >5M32-h nrPDB Length = 355 Score = 47.7 bits (112), Expect = 1e-05, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 21/230 (9%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + VL+ GPP TGKT LA V+ D F ++GSE+ + + + + Sbjct: 142 GIAQPKGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSELVQKFIGEGARMV----R 195 Query: 124 SIGIKIKEETE--LIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTK 181 + + +E + E+ I R G G ++ T +E + +L + Sbjct: 196 ELFVMAREHAPSIIFMDEIDSIGSSR--LEGGSGGDSEVQRTMLELLNQLDG--FEATKN 251 Query: 182 EKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRK-TVVHTVS 240 KV+ ID + + GR R ++ + R ++ RK + ++ Sbjct: 252 IKVIMA-TNRIDILDSALLRPGRID-RKIEFPPPNEEARLDIL---KIHSRKMNLTRGIN 306 Query: 241 LHEIDVINSRTQGFLALFTGDTGEI-RSEVRDQINTKVAEWKEEGKAEIV 289 L +I A G E +R++ E E A+++ Sbjct: 307 LRKI--AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 354 >5VHO-A nrPDB Length = 267 Score = 47.7 bits (112), Expect = 1e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 + V G + VL+ GPP TGKT A V+ D F + GSE+ + + Sbjct: 43 RFVNLGIEPPKGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSELVQKYVGE 95 >3D8B-A nrPDB Length = 357 Score = 47.7 bits (112), Expect = 1e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 2/55 (3%) Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAF 121 + +L+ GPP TGKT + ++ G F +I+ S + S + + E + +A Sbjct: 116 PPKGILLFGPPGTGKTLIGKCIASQSGAT--FFSISASSLTSKWVGEGEKMVRAL 168 >6MSD-E nrPDB Length = 403 Score = 47.7 bits (112), Expect = 1e-05, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQ 119 + G I + L+ GPP TGKT LA V+ L D F + S I + ++ L + Sbjct: 173 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSIVDKYIGESARLIR 230 >5E7P-A nrPDB Length = 745 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 6/89 (6%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTE-ALT 118 + G R VL+ GPP GKT + ++ S + A+ GSE+ + +E A+ Sbjct: 511 FSRLGIDPPRGVLLYGPPGCGKTFVVRALASS--GRLSVHAVKGSELMDKWVGSSEKAVR 568 Query: 119 QAFRKSIGIKIKEETELIEGEVVEIQIDR 147 + F ++ + + + E+ + R Sbjct: 569 ELFARA---RDSAPSLVFLDEIDALAPRR 594 >5GJQ-J nrPDB Length = 406 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 21/230 (9%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + VL+ GPP TGKT LA V+ D F ++GSE+ + + + + Sbjct: 179 GIAQPKGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSELVQKFIGEGARMV----R 232 Query: 124 SIGIKIKEETE--LIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTK 181 + + +E + E+ I R G G ++ T +E + +L + Sbjct: 233 ELFVMAREHAPSIIFMDEIDSIGSSR--LEGGSGGDSEVQRTMLELLNQLDG--FEATKN 288 Query: 182 EKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRK-TVVHTVS 240 KV+ ID + + GR R ++ + R ++ RK + ++ Sbjct: 289 IKVIMA-TNRIDILDSALLRPGRID-RKIEFPPPNEEARLDIL---KIHSRKMNLTRGIN 343 Query: 241 LHEIDVINSRTQGFLALFTGDTGEI-RSEVRDQINTKVAEWKEEGKAEIV 289 L +I A G E +R++ E E A+++ Sbjct: 344 LRKI--AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 391 >6MSK-B nrPDB Length = 440 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 24/196 (12%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ GPP TGKT LA V+ F + GSE+ L L + Sbjct: 215 GIKPPKGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVREL-- 270 Query: 124 SIGIKIKEE---TELIEGEVVEIQIDR--SITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 ++ EE + + E+ I R S +GG ++ I+ T +E + +L D Sbjct: 271 ---FRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGERE----IQRTMLELLNQLDG--FDS 321 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQ-KRKTVVH 237 KV+ I+ + + GR R ++ T+ ++ R T+ Sbjct: 322 RGDVKVIMA-TNRIETLDPALIRPGRID-RKIEFPLPDEKTKKRIF---QIHTSRMTLAD 376 Query: 238 TVSLHEIDVINSRTQG 253 V+L ++ + G Sbjct: 377 DVTLDDLIMAKDDLSG 392 >5VFP-B nrPDB Length = 389 Score = 47.4 bits (111), Expect = 1e-05, Method: Composition-based stats. Identities = 43/196 (21%), Positives = 76/196 (38%), Gaps = 24/196 (12%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ GPP TGKT LA V+ F + GSE+ L L + Sbjct: 164 GIKPPKGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVREL-- 219 Query: 124 SIGIKIKEE---TELIEGEVVEIQIDR--SITGGHKQGKLTIKTTDMETIYELGNKMIDG 178 ++ EE + + E+ I R S +GG ++ I+ T +E + +L D Sbjct: 220 ---FRVAEEHAPSIVFIDEIDAIGTKRYDSNSGGERE----IQRTMLELLNQLDG--FDS 270 Query: 179 LTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQ-KRKTVVH 237 KV+ I+ + + GR R ++ T+ ++ R T+ Sbjct: 271 RGDVKVIMA-TNRIETLDPALIRPGRID-RKIEFPLPDEKTKKRIF---QIHTSRMTLAD 325 Query: 238 TVSLHEIDVINSRTQG 253 V+L ++ + G Sbjct: 326 DVTLDDLIMAKDDLSG 341 >5VHF-B nrPDB Length = 340 Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT-QAFR 122 G + V++ GPP TGKT LA V+ F + GSE+ L L + FR Sbjct: 123 GIKPPKGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFR 180 Query: 123 KS 124 + Sbjct: 181 VA 182 >6EF0-H nrPDB Length = 257 Score = 47.4 bits (111), Expect = 2e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 + G + +L+ GPP TGKT A V+ D F + GSE+ + + Sbjct: 34 RFATLGIDPPKGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSELVQKYVGE 86 >5VHO-B nrPDB Length = 267 Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats. Identities = 20/62 (32%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT-QAFR 122 G + V++ GPP TGKT LA V+ F + GSE+ L L + FR Sbjct: 49 GIKPPKGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFR 106 Query: 123 KS 124 + Sbjct: 107 VA 108 >5VHP-C nrPDB Length = 266 Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats. Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 21/230 (9%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + VL+ GPP TGKT LA V+ D F ++GSE+ + + + + Sbjct: 50 GIAQPKGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSELVQKFIGEGARMV----R 103 Query: 124 SIGIKIKEETE--LIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTK 181 + + +E + E+ I R G G ++ T +E + +L + Sbjct: 104 ELFVMAREHAPSIIFMDEIDSIGSSR--LEGGSGGDSEVQRTMLELLNQLDG--FEATKN 159 Query: 182 EKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRK-TVVHTVS 240 KV+ ID + + GR R ++ + R ++ RK + ++ Sbjct: 160 IKVIMA-TNRIDILDSALLRPGRID-RKIEFPPPNEEARLDIL---KIHSRKMNLTRGIN 214 Query: 241 LHEIDVINSRTQGFLALFTGDTGEI-RSEVRDQINTKVAEWKEEGKAEIV 289 L +I A G E +R++ E E A+++ Sbjct: 215 LRKI--AELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVM 262 >2DHR-A nrPDB Length = 499 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Query: 37 PRPTSEGMVGQLQARRAAGVILKMVQ----NGTIAGR---AVLVAGPPSTGKTALAMGVS 89 P+ T + + G +A+ I++ ++ + R VL+ GPP GKT LA V+ Sbjct: 26 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVA 85 Query: 90 QSLGKDVPFTAIAGSEIFSLELS 112 VPF +GS+ + + Sbjct: 86 GE--ARVPFITASGSDFVEMFVG 106 >1IY1-A nrPDB Length = 254 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 9/83 (10%) Query: 37 PRPTSEGMVGQLQARRAAGVILKMVQ----NGTIAGR---AVLVAGPPSTGKTALAMGVS 89 P+ T + + G +A+ I++ ++ + R VL+ GPP GKT LA V+ Sbjct: 11 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVA 70 Query: 90 QSLGKDVPFTAIAGSEIFSLELS 112 VPF +GS+ + + Sbjct: 71 GE--ARVPFITASGSDFVEMFVG 91 >6EF3-H nrPDB Length = 467 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 2/55 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 + G + +L+ GPP TGKT A V+ D F + GSE+ + + Sbjct: 234 RFATLGIDPPKGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSELVQKYVGE 286 >5EQT-A nrPDB Length = 257 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Query: 42 EGMVGQLQA-RRAAGVILK----MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 G+ QLQ R A + LK + G + VL+ GPP GKT +A ++ + + Sbjct: 8 GGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALAHEV--NA 65 Query: 97 PFTAIAGSEIFSLELSKTEALTQ 119 F + GSE+ + + L Sbjct: 66 TFIRVVGSELVRKYIGEGARLVH 88 >6NYV-B nrPDB Length = 314 Score = 46.6 bits (109), Expect = 2e-05, Method: Composition-based stats. Identities = 24/102 (23%), Positives = 41/102 (40%), Gaps = 11/102 (10%) Query: 29 LGLDE--NLQPRPTSEGMVGQLQARRAAGVIL-------KMVQNGTIAGRAVLVAGPPST 79 L LDE + + GQ A++A ++ ++ + +L+ GPP Sbjct: 24 LILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGN 83 Query: 80 GKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAF 121 GKT LA V+ F I+ + + S + E L +A Sbjct: 84 GKTLLARAVATECSAT--FLNISAASLTSKYVGDGEKLVRAL 123 >2QZ4-A nrPDB Length = 262 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109 + +Q G + L+ GPP GKT LA V+ VPF A+AG+E + Sbjct: 30 RFLQLGAKVPKGALLLGPPGCGKTLLAKAVATE--AQVPFLAMAGAEFVEV 78 >5VHN-D nrPDB Length = 262 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 45 VGQLQARRAAGVIL---KMVQN-GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTA 100 + + + R A + L ++ + G R VL+ GPP GKT LA V+ F Sbjct: 28 IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIR 85 Query: 101 IAGSEIFSLELSKTEALTQA-FRKS 124 + GSE L + + + FR + Sbjct: 86 VVGSEFVQKYLGEGPRMVRDVFRLA 110 >1HQC-A nrPDB Length = 324 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%) Query: 32 DENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQS 91 D L+P+ E +GQ + ++ V L+ + +L+ GPP GKT LA ++ Sbjct: 3 DLALRPKTLDE-YIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHE 61 Query: 92 LGKDVPFTA 100 LG ++ T+ Sbjct: 62 LGVNLRVTS 70 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 67/196 (34%), Gaps = 30/196 (15%) Query: 233 KTVVHTVSLHEIDVINSRTQGFLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGV 292 KT + V HE+ V N R A+ + +A EEG + Sbjct: 51 KTTLAHVIAHELGV-NLRVTSGPAIEKP----------GDLAAILANSLEEG------DI 93 Query: 293 LFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTR---------GTNYKSPHGL 343 LFIDE+H L + + A+ED IV+ R G P + Sbjct: 94 LFIDEIHRLSRQAEEHLYPAMEDFVMDIVI-GQGPAARTIRLELPRFTLIGAT-TRPGLI 151 Query: 344 PLDLLDRSIIITTKS-YNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNL 402 LL R I+ Y +E+ + A+ V ++ +A + + ++R + L Sbjct: 152 TAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEEAALEIGRR-SRGTMRVAKRL 210 Query: 403 ISVAQQIAMKRKNNTV 418 + A + Sbjct: 211 FRRVRDFAQVAGEEVI 226 >6AZ0-A nrPDB Length = 439 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%) Query: 46 GQLQARRAAGVILKMVQN--------GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVP 97 G +AR I+ +++ G + + VL+ GPP TGKT LA + G D Sbjct: 7 GCDEARAELEEIVDFLKDPTKYESLGGKLP-KGVLLTGPPGTGKTLLARATAGEAGVDFF 65 Query: 98 FTAIAGSEIFSLELS 112 F ++GSE + + Sbjct: 66 F--MSGSEFDEVYVG 78 >5VHO-F nrPDB Length = 267 Score = 46.2 bits (108), Expect = 3e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 24 SHITGLGLDENLQPRPTSEGMVGQLQARRAAGVIL------KMVQNGTIAGRAVLVAGPP 77 S + + +DE + + G + + ++L K G + VL+ GPP Sbjct: 5 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 64 Query: 78 STGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 TGKT LA + F +AG ++ + + L + Sbjct: 65 GTGKTLLARACAAQ--TKATFLKLAGPQLVQMFIGDGAKLVRD 105 >5VFP-F nrPDB Length = 396 Score = 45.8 bits (107), Expect = 4e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 24 SHITGLGLDENLQPRPTSEGMVGQLQARRAAGVIL------KMVQNGTIAGRAVLVAGPP 77 S + + +DE + + G + + ++L K G + VL+ GPP Sbjct: 127 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 186 Query: 78 STGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 TGKT LA + F +AG ++ + + L + Sbjct: 187 GTGKTLLARACAAQ--TKATFLKLAGPQLVQMFIGDGAKLVRD 227 >5T0C-AD nrPDB Length = 418 Score = 45.8 bits (107), Expect = 4e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 2/52 (3%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 Q G R VL+ GPP GKT LA V+ F + GSE L + Sbjct: 193 QIGIDPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIRVVGSEFVQKYLGE 242 >5A5B-M nrPDB Length = 434 Score = 45.8 bits (107), Expect = 4e-05, Method: Composition-based stats. Identities = 44/222 (19%), Positives = 81/222 (36%), Gaps = 21/222 (9%) Query: 24 SHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTI------AGRAVLVAGPP 77 S + + +DE + G + + ++L M + A + L+ GPP Sbjct: 165 SRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPP 224 Query: 78 STGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGI-KIKEETELI 136 TGKT LA + + F +A ++ + + + L R + + K K T + Sbjct: 225 GTGKTLLARACAAQ--TNATFLKLAAPQLVQMYIGEGAKLV---RDAFALAKEKAPTIIF 279 Query: 137 EGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKAS 196 E+ I R K G ++ T +E + +L + KVLA +D Sbjct: 280 IDELDAIGTKR--FDSEKSGDREVQRTMLELLNQLDG--FSSDDRVKVLAA-TNRVDVLD 334 Query: 197 GKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHT 238 + + GR R ++ D+R ++ RK Sbjct: 335 PALLRSGRLD-RKIEFPLPSEDSRAQIL---QIHSRKMTTDD 372 >6EPD-M nrPDB Length = 442 Score = 45.4 bits (106), Expect = 5e-05, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 40/103 (38%), Gaps = 8/103 (7%) Query: 24 SHITGLGLDENLQPRPTSEGMVGQLQARRAAGVIL------KMVQNGTIAGRAVLVAGPP 77 S + + +DE + + G + + ++L K G + VL+ GPP Sbjct: 173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232 Query: 78 STGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQA 120 TGKT LA + F +AG ++ + + L + Sbjct: 233 GTGKTLLARACAAQ--TKATFLKLAGPQLVQMFIGDGAKLVRD 273 >6EF0-M nrPDB Length = 258 Score = 45.4 bits (106), Expect = 6e-05, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 15/181 (8%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALT 118 K G A + L+ GPP TGKT LA + + F +A ++ + + + L Sbjct: 31 KFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ--TNATFLKLAAPQLVQMYIGEGAKLV 88 Query: 119 QAFRKSIGI-KIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMID 177 R + + K K T + E+ I R K G ++ T +E + +L Sbjct: 89 ---RDAFALAKEKAPTIIFIDELDAIGTKR--FDSEKSGDREVQRTMLELLNQLDG--FS 141 Query: 178 GLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVH 237 + KVLA +D + + GR R ++ D+R ++ RK Sbjct: 142 SDDRVKVLAA-TNRVDVLDPALLRSGRLD-RKIEFPLPSEDSRAQIL---QIHSRKMTTD 196 Query: 238 T 238 Sbjct: 197 D 197 >6MDP-A nrPDB Length = 768 Score = 45.0 bits (105), Expect = 6e-05, Method: Composition-based stats. Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 + +L+ GPP GKT LA + + L P + G EI + + ++EA Sbjct: 278 KGILLYGPPGCGKTLLARQIGKMLNAREPKV-VNGPEILNKYVGESEA 324 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%) Query: 60 MVQNGTIAGR----AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE--IFSLELSK 113 +VQ + R +VL+ GPP +GKTALA +++ + PF I + I E +K Sbjct: 548 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSETAK 605 Query: 114 TEALTQAF 121 +A+ + F Sbjct: 606 CQAMKKIF 613 >4XGU-A nrPDB Length = 424 Score = 45.0 bits (105), Expect = 7e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 7/58 (12%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLG-------KDVPFTAIAGSEIFSLELSKTEALTQ 119 R +L+ GPP TGKT+L G++Q L I +FS S++ L Q Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSLFSKWFSESGKLVQ 230 >1NJG-A nrPDB Length = 250 Score = 44.7 bits (104), Expect = 9e-05, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 14/112 (12%) Query: 292 VLFIDEVHMLDIECFSFINRALEDEFAPI-VMMATNRGVSKTRGTNYKSPHGLPLDLLDR 350 V IDEVHML F+ + + LE+ + ++AT P LP+ +L R Sbjct: 129 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLAT------------TDPQKLPVTILSR 176 Query: 351 SIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNL 402 + K+ + ++I+ L EE + AL LL + E SLR + +L Sbjct: 177 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 227 Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 39 PTSEGMVGQLQARRAAGVILKMVQNGTIAGR---AVLVAGPPSTGKTALAMGVSQSLGKD 95 T +VGQ +L + NG GR A L +G GKT++A +++ L + Sbjct: 20 QTFADVVGQEH-------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 72 Query: 96 VPFTA 100 TA Sbjct: 73 TGITA 77 >6FVU-I nrPDB Length = 384 Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ G P TGKT LA V+ F I GSE+ L L + K Sbjct: 159 GIKPPKGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSELIQKYLGDGPRLCRQIFK 216 Query: 124 SIG 126 G Sbjct: 217 VAG 219 >3JCP-I nrPDB Length = 437 Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ G P TGKT LA V+ F I GSE+ L L + K Sbjct: 212 GIKPPKGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSELIQKYLGDGPRLCRQIFK 269 Query: 124 SIG 126 G Sbjct: 270 VAG 272 >3GLF-B nrPDB Length = 395 Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats. Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 14/112 (12%) Query: 292 VLFIDEVHMLDIECFSFINRALEDEFAPI-VMMATNRGVSKTRGTNYKSPHGLPLDLLDR 350 V IDEVHML F+ + + LE+ + ++AT P LP+ +L R Sbjct: 144 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLAT------------TDPQKLPVTILSR 191 Query: 351 SIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNL 402 + K+ + ++I+ L EE + AL LL + E SLR + +L Sbjct: 192 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 242 Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 10/65 (15%) Query: 39 PTSEGMVGQLQARRAAGVILKMVQNGTIAGR---AVLVAGPPSTGKTALAMGVSQSLGKD 95 T +VGQ +L + NG GR A L +G GKT++A +++ L + Sbjct: 35 QTFADVVGQEH-------VLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCE 87 Query: 96 VPFTA 100 TA Sbjct: 88 TGITA 92 >5VQ9-D nrPDB Length = 432 Score = 44.3 bits (103), Expect = 1e-04, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 8/63 (12%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVP-------FTAIAGSEIFSLELSKTEAL-TQA 120 R VL+ GPP TGKT+L ++Q L + I +FS S++ L T+ Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKM 232 Query: 121 FRK 123 F+K Sbjct: 233 FQK 235 >6EF2-J nrPDB Length = 262 Score = 43.9 bits (102), Expect = 1e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 G + V++ GPP TGKT LA V+ D F ++G+E+ + + Sbjct: 35 GIAQPKGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAELVQKYIGE 82 >6EF1-I nrPDB Length = 271 Score = 43.9 bits (102), Expect = 2e-04, Method: Composition-based stats. Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 G + V++ G P TGKT LA V+ F I GSE+ L L + K Sbjct: 46 GIKPPKGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSELIQKYLGDGPRLCRQIFK 103 Query: 124 SIG 126 G Sbjct: 104 VAG 106 >3JCO-J nrPDB Length = 405 Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSK 113 G + V++ GPP TGKT LA V+ D F ++G+E+ + + Sbjct: 178 GIAQPKGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAELVQKYIGE 225 >1IN6-A nrPDB Length = 334 Score = 41.6 bits (96), Expect = 7e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 28/57 (49%) Query: 44 MVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTA 100 +GQ ++ + L+ + VL+AGPP G+T LA ++ L ++ T+ Sbjct: 27 FIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASELQTNIHVTS 83 Score = 36.6 bits (83), Expect = 0.027, Method: Composition-based stats. Identities = 33/158 (20%), Positives = 59/158 (37%), Gaps = 31/158 (19%) Query: 292 VLFIDEVHMLDIECFSFINRALED------------------EFAPIVMMATNRGVSKTR 333 VLFIDE+H L+ + A+ED + P ++ + TR Sbjct: 105 VLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLVG-----ATTR 159 Query: 334 GTNYKSPHGLPLDLLDRS-IIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGV 392 SP L R II+ Y +E+K I+ A +VE+ A +++ K Sbjct: 160 SGLLSSP------LRSRFGIILELDFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKR-S 212 Query: 393 ETSLRYSSNLISVAQQIAMKRKNNTVEVEDVKRAYLLF 430 + R + L + + K + + + V + + Sbjct: 213 RGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL 250 >6BLB-A nrPDB Length = 355 Score = 41.2 bits (95), Expect = 9e-04, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Query: 31 LDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQ 90 LD ++P ++ +GQ R + + + A L+ GPP GKT LA ++Q Sbjct: 23 LDRAIRPLKLAD-YIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQ 81 Query: 91 SLGKDVPFTA 100 +G + T+ Sbjct: 82 EMGVSIKSTS 91 >6B5D-A nrPDB Length = 309 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 56 VILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQS 91 ++ + Q +A+++AGPP TGKT +A ++ Sbjct: 51 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 86 >5WC0-A nrPDB Length = 472 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 56 VILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQS 91 ++ + Q +A+++AGPP TGKT +A ++ Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249 >1SXJ-A nrPDB Length = 516 Score = 40.0 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 22/35 (62%) Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 ++G+ RA ++ GPP GKT A V+Q LG D+ Sbjct: 71 KDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDI 105 >4ZPX-A nrPDB Length = 413 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Query: 32 DENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQS 91 +E P + ++GQ A +++++ R VL+ G P TGK+ L +++ Sbjct: 31 EEIEVPEKLIDQVIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAEL 83 Query: 92 LGKDV 96 L + Sbjct: 84 LPTET 88 >3GP8-A nrPDB Length = 574 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 13/79 (16%) Query: 28 GLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMG 87 G G D+ P+ +G+ + + +L + R V++ G P TGK+ Sbjct: 174 GAGNDDWAVPKKARKGLSEEQAS------VLDQLAGH----RLVVLTGGPGTGKSTTTKA 223 Query: 88 V---SQSLGKDVPFTAIAG 103 V ++SLG +V A G Sbjct: 224 VADLAESLGLEVGLCAPTG 242 >1D2N-A nrPDB Length = 272 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%) Query: 60 MVQNGTIAGR----AVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE--IFSLELSK 113 +VQ + R +VL+ GPP +GKTALA +++ + PF I + I E +K Sbjct: 52 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSETAK 109 Query: 114 TEALTQAF 121 +A+ + F Sbjct: 110 CQAMKKIF 117 >3K1J-A nrPDB Length = 604 Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 7/65 (10%) Query: 32 DENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQS 91 +E P + ++GQ A +++++ R VL+ G P TGK+ L +++ Sbjct: 31 EEIEVPEKLIDQVIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAEL 83 Query: 92 LGKDV 96 L + Sbjct: 84 LPTET 88 >3M6A-A nrPDB Length = 543 Score = 37.3 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 25/40 (62%) Query: 64 GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 ++ G + +AGPP GKT+LA +++SLG+ ++ G Sbjct: 104 KSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGG 143 >1SXJ-D nrPDB Length = 353 Score = 37.3 bits (85), Expect = 0.015, Method: Composition-based stats. Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Query: 53 AAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSL-GKDV 96 A V+ K +++ + +L GPP TGKT+ + +++ L G D+ Sbjct: 45 AVTVLKKTLKSANLPH--MLFYGPPGTGKTSTILALTKELYGPDL 87 >1SXJ-C nrPDB Length = 340 Score = 37.0 bits (84), Expect = 0.017, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 10/93 (10%) Query: 52 RAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSL-GKDVPFTAI-------AG 103 + K V G + +L GPP TGKT+ + +++ + GK+ + G Sbjct: 32 EVITTVRKFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSNMVLELNASDDRG 89 Query: 104 SEIFSLELSKTEALTQAFRKSIGIKIKEETELI 136 ++ ++ + Q F K + I +E + + Sbjct: 90 IDVVRNQIKDFASTRQIFSKGFKLIILDEADAM 122 >4NMN-A nrPDB Length = 434 Score = 37.0 bits (84), Expect = 0.020, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 58 LKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEAL 117 L + G G +++A P GKTA + + +L KD S +FSLE+SK + + Sbjct: 183 LDLKTTGFHPGDLIILAARPGMGKTAFMLSIIYNLAKDEG----KPSAVFSLEMSKEQLV 238 Query: 118 TQ 119 + Sbjct: 239 MR 240 >1FNN-A nrPDB Length = 389 Score = 37.0 bits (84), Expect = 0.020, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 36/86 (41%), Gaps = 10/86 (11%) Query: 353 IITTKSYNEQEIKTILSIRAQE--EEVELSSDALDLLTKT-GVETSL-------RYSSNL 402 +I Y + +I IL RA+ E S D L ++ G +T L R + ++ Sbjct: 187 VIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDI 246 Query: 403 ISVAQQIAMKRKNNTVEVEDVKRAYL 428 + + A + + EDV+++ Sbjct: 247 LYRSAYAAQQNGRKHIAPEDVRKSSK 272 >3PFI-A nrPDB Length = 338 Score = 36.6 bits (83), Expect = 0.026, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 26/58 (44%) Query: 43 GMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTA 100 G +GQ ++ V + + +L +GP GKT LA +S + ++ TA Sbjct: 30 GYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSANIKTTA 87 >1IQP-A nrPDB Length = 327 Score = 36.2 bits (82), Expect = 0.028, Method: Composition-based stats. Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Query: 60 MVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSL 92 V+ G++ +L AGPP GKT A+ +++ L Sbjct: 40 YVKTGSMPH--LLFAGPPGVGKTTAALALAREL 70 >3ICE-A nrPDB Length = 422 Score = 36.2 bits (82), Expect = 0.032, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 46/115 (40%), Gaps = 17/115 (14%) Query: 68 GRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGI 127 G+ L+ PP GKT L ++QS+ + P + + ++ E Sbjct: 174 GQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLM---VLLIDERPEE------------ 218 Query: 128 KIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKM-IDGLTK 181 + E L++GEVV D + + ++ I+ ++ + +D +T+ Sbjct: 219 -VTEMQRLVKGEVVASTFDEPASRHVQVAEMVIEKAKRLVEHKKDVIILLDSITR 272 >2CHG-A nrPDB Length = 226 Score = 35.4 bits (80), Expect = 0.051, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 71 VLVAGPPSTGKTALAMGVSQSL 92 +L +GPP TGKTA A+ +++ L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >2GZA-A nrPDB Length = 361 Score = 35.0 bits (79), Expect = 0.064, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 1/62 (1%) Query: 47 QLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG-SE 105 +L A + AG + ++ R ++VAG +GKT L + Q + D I E Sbjct: 154 ELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQEIPFDQRLITIEDVPE 213 Query: 106 IF 107 +F Sbjct: 214 LF 215 >2W0M-A nrPDB Length = 235 Score = 35.0 bits (79), Expect = 0.065, Method: Composition-based stats. Identities = 42/230 (18%), Positives = 84/230 (36%), Gaps = 32/230 (13%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMG-VSQSLGKDVPFTAIAGSEIFSLELSKTEAL 117 K++Q G G + + G P TGKT ++ +++ L P + E + + + Sbjct: 14 KLIQGGIPQGFFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTEESRDSIIRQAKQF 73 Query: 118 TQAFRKSIGIKI-------KEETELIEGEVVEIQIDRSITG--------GHKQGKLTIKT 162 F + I K+ KE+ + + +V + + + G+ + +L I + Sbjct: 74 NWDFEEYIEKKLIIIDALMKEKED--QWSLVNLTPEELVNKVIEAKQKLGYGKARLVIDS 131 Query: 163 TDMETIYELGNKMIDGLTK--EKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTR 220 ++ M ++ ++VL +I S ++F ++ A G Sbjct: 132 V--SALFLDKPAMARKISYYLKRVLNKWNFTIYATSQYAITTSQAFGFGVEHVADGIIRF 189 Query: 221 FVQCPEGELQ------KRKTVVHTVSLHEIDVINSRTQGFLALFTGDTGE 264 GEL K + H + EID++N G + G E Sbjct: 190 RRMIRNGELHRYILIEKMRQTDHDKHVWEIDIVN----GKGIVLKGRLEE 235 >2CHV-A nrPDB Length = 319 Score = 35.0 bits (79), Expect = 0.066, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 71 VLVAGPPSTGKTALAMGVSQSL 92 +L +GPP TGKTA A+ +++ L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >5LKM-A nrPDB Length = 452 Score = 34.6 bits (78), Expect = 0.099, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 17/145 (11%) Query: 59 KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE------------- 105 +++ G + G VL+ G P GK+ L + VS L + ++G E Sbjct: 79 RVLGGGVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEESAQQIKLRAERLG 138 Query: 106 -IFSLELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITGG--HKQGKLTIKT 162 I S E Q+ R + +I+ + +I+ + + S G + ++T + Sbjct: 139 DIDSEFYLYAETNMQSVRAEVE-RIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAEL 197 Query: 163 TDMETIYELGNKMIDGLTKEKVLAG 187 + + ++ +TKE LAG Sbjct: 198 MQLAKTNNIAIFIVGHVTKEGTLAG 222 >3PVS-A nrPDB Length = 447 Score = 34.6 bits (78), Expect = 0.10, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 3/70 (4%) Query: 37 PRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 P ++ +GQ A + + ++ G + ++++ GPP TGKT LA +++ DV Sbjct: 22 PENLAQ-YIGQQHLLAAGKPLPRAIEAGHL--HSMILWGPPGTGKTTLAEVIARYANADV 78 Query: 97 PFTAIAGSEI 106 + S + Sbjct: 79 ERISAVTSGV 88 >4I5O-A nrPDB Length = 363 Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats. Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 12/66 (18%) Query: 44 MVGQLQARRAAGVIL----KMVQNGTIAG------RAVLVAGPPSTGKTALAMGVSQSLG 93 ++GQ QA++ V + K ++NG + +L+ GP +GKT LA +++ L Sbjct: 17 VIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLL- 75 Query: 94 KDVPFT 99 DVPFT Sbjct: 76 -DVPFT 80 >2R6A-A nrPDB Length = 454 Score = 33.9 bits (76), Expect = 0.15, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%) Query: 58 LKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEAL 117 L + +G ++VA PS GKTA A+ ++Q++ IFSLE+S + + Sbjct: 193 LDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN----ENVAIFSLEMSAQQLV 248 Query: 118 TQ 119 + Sbjct: 249 MR 250 >6EM8-A nrPDB Length = 818 Score = 33.1 bits (74), Expect = 0.23, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 72 LVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKE 131 ++ G P GKTA+A G++Q++ + + + SL++ A T+ +R ++K+ Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTK-YRGEFEERLKK 263 Query: 132 ETELIE 137 E I+ Sbjct: 264 VMEEIQ 269 Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 10/96 (10%) Query: 17 LSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNG-TIAGRAV---L 72 L+ I L L++ L R ++GQ A + ++ + G R + + Sbjct: 488 LTKINETESEKLLSLEDTLHER-----VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFI 542 Query: 73 VAGPPSTGKTALAMGVSQSL-GKDVPFTAIAGSEIF 107 GP GKT LA +++S+ G D + SE Sbjct: 543 FLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFM 578 >6AMN-A nrPDB Length = 349 Score = 33.1 bits (74), Expect = 0.30, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 26/40 (65%) Query: 73 VAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 + G P GKTA+ GV+Q + D T + G+++FSL+L+ Sbjct: 207 LIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 246 >1R6B-X nrPDB Length = 758 Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 46 GQLQARRAAGVILKMVQNGT----IAGRAVLVAGPPSTGKTALAMGVSQSLG 93 GQ +A A +KM + G + L AGP GKT + + +S++LG Sbjct: 462 GQDKAIEALTEAIKMARAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALG 513 >5VY8-A nrPDB Length = 908 Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 26/40 (65%) Query: 73 VAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 + G P GKTA+ GV+Q + D T + G+++FSL+L+ Sbjct: 210 LIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 249 >3CM0-A nrPDB Length = 186 Score = 32.7 bits (73), Expect = 0.31, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%) Query: 68 GRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFR 122 G+AV+ GPP GK A ++Q LG F ++ +I +++ L + R Sbjct: 4 GQAVIFLGPPGAGKGTQASRLAQELG----FKKLSTGDILRDHVARGTPLGERVR 54 >6EMW-E nrPDB Length = 181 Score = 32.7 bits (73), Expect = 0.35, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 1/66 (1%) Query: 72 LVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIKE 131 ++ G P GKTA+A G++Q++ + + + SL++ A T+ +R ++K+ Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTK-YRGEFEERLKK 102 Query: 132 ETELIE 137 E I+ Sbjct: 103 VMEEIQ 108 >4LJ8-A nrPDB Length = 339 Score = 32.7 bits (73), Expect = 0.35, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 44 MVGQLQARRAAGVILKMVQNG-TIAGRAV---LVAGPPSTGKTALAMGVSQSL 92 +VGQ +A RA ++ + G R + L GP GKT LA ++ +L Sbjct: 45 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATL 97 >1TAF-A nrPDB Length = 68 Score = 32.7 bits (73), Expect = 0.35, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 37/72 (51%), Gaps = 4/72 (5%) Query: 361 EQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNNTVEV 420 ++ + I+SI + E ++ L +E + RY ++++ A+ A + T+++ Sbjct: 1 PKDAQVIMSILKELNVQEYEPRVVNQL----LEFTFRYVTSILDDAKVYANHARKKTIDL 56 Query: 421 EDVKRAYLLFLD 432 +DV+ A + LD Sbjct: 57 DDVRLATEVTLD 68 >5D4W-A nrPDB Length = 926 Score = 32.3 bits (72), Expect = 0.43, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%) Query: 44 MVGQLQARRAAGVILKMVQNGTIAGR---AVLVAGPPSTGKTALAMGVSQSL 92 +VGQ +A ++ +++ ++G + L GP TGKT L +++ L Sbjct: 600 VVGQKEAVQSVSNAIRLQRSGLSNPNQPPSFLFCGPSGTGKTLLTKALAEFL 651 Score = 28.5 bits (62), Expect = 5.9, Method: Composition-based stats. Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 6/112 (5%) Query: 2 SIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMV 61 +IQ N+ D ++ + +++ +D R EG + + R + + Sbjct: 154 AIQAIRGNKRVDSRNADTEQENENLSKFCIDMTAMAR---EGKIDPVIGREEEIRRVIRI 210 Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSL-GKDVPFTAIAGSEIFSLELS 112 + VL+ G P GKT + G++Q + DVP +A ++ SL++ Sbjct: 211 LSRRTKNNPVLI-GEPGVGKTTIVEGLAQRIVNADVP-DNLAACKLLSLDVG 260 >1QVR-A nrPDB Length = 854 Score = 31.6 bits (70), Expect = 0.71, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 4/53 (7%) Query: 44 MVGQLQARRAAGVILKMVQNG-TIAGRAV---LVAGPPSTGKTALAMGVSQSL 92 +VGQ +A RA ++ + G R + L GP GKT LA ++ +L Sbjct: 560 VVGQDEAIRAVADAIRRARAGLKDPNRPIGSFLFLGPTGVGKTELAKTLAATL 612 Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 48 LQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIF 107 + RR ++L+ +N + + G P GKTA+ G++Q + K + G I Sbjct: 177 EEIRRVIQILLRRTKNNPV------LIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIV 230 Query: 108 SLELS 112 SL++ Sbjct: 231 SLQMG 235 >3W34-A nrPDB Length = 211 Score = 31.6 bits (70), Expect = 0.88, Method: Composition-based stats. Identities = 10/29 (34%), Positives = 19/29 (65%) Query: 73 VAGPPSTGKTALAMGVSQSLGKDVPFTAI 101 +AG ++GKT LA ++++LG+ V + Sbjct: 11 IAGGTASGKTTLAQALARTLGERVALLPM 39 >5M7N-A nrPDB Length = 454 Score = 31.2 bits (69), Expect = 0.93, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 52/131 (39%), Gaps = 22/131 (16%) Query: 71 VLVAGPPSTGKTALAMGV-SQSLGKDVPFTAIAGS---------EIFSLELSKTEALTQA 120 +++ GP GK +A + +QS + PF + + E+F E+ E A Sbjct: 167 IMITGPSGAGKELVARAIHAQSSRANGPFVTVNAATITPERMEIELFGTEMDGGERKVGA 226 Query: 121 FRKSIGIKI---------KEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYEL 171 ++ G + +E I +V+ Q +R GG K+ K+ ++ L Sbjct: 227 LEEAHGGILYLDEVADMPRETQNKILRVLVDQQFER--VGGTKRVKVDVRIISSTAQ-NL 283 Query: 172 GNKMIDGLTKE 182 + +G +E Sbjct: 284 EGMIAEGTFRE 294 >6QEL-G nrPDB Length = 245 Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 18/190 (9%) Query: 2 SIQTSDPNETSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMV 61 +I+++ + + S I L + + + GQ+ A A ++ Sbjct: 38 AIRSAALERENRAMKMQRTFNRSGIRPLHQNCSFENYRVECE--GQMNALSKARQYVEEF 95 Query: 62 QNGTIAGRAVLVAGPPSTGKTALAMGVSQSL---GKDVPFTAIAG-----SEIFSLELSK 113 +G IA + +G P TGK LA + L GK V +A + F + Sbjct: 96 -DGNIAS--FIFSGKPGTGKNHLAAAICNELLLRGKSVLIITVADIMSAMKDTFRNSGTS 152 Query: 114 TEALTQAFRKSIGIKIKE----ETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIY 169 E L + I E E ++ +DR + G LT + T Sbjct: 153 EEQLLNDLSNVDLLVIDEIGVQTESKYEKVIINQIVDRRSSSKRPTGMLTNSNMEEMTKL 212 Query: 170 ELGNKMIDGL 179 LG +++D + Sbjct: 213 -LGERVMDRM 221 >6EMW-B nrPDB Length = 225 Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 10/96 (10%) Query: 17 LSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNG-TIAGRAV---L 72 L+ I L L++ L R ++GQ A + ++ + G R + + Sbjct: 1 LTKINETESEKLLSLEDTLHER-----VIGQKDAVNSISKAVRRARAGLKDPKRPIGSFI 55 Query: 73 VAGPPSTGKTALAMGVSQSL-GKDVPFTAIAGSEIF 107 GP GKT LA +++S+ G D + SE Sbjct: 56 FLGPTGVGKTELARALAESMFGDDDAMIRVDMSEFM 91 >6G1K-A nrPDB Length = 921 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 24/83 (28%), Positives = 32/83 (38%), Gaps = 5/83 (6%) Query: 172 GNKMIDGLTKE--KVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGEL 229 K +GLT+E K L D+ S + K R R+ D +D PEG L Sbjct: 723 DAKTEEGLTEENFKELKQDISSFRYEVIGMMKGNRKSTRANKSDTSASDVSH---PEGSL 779 Query: 230 QKRKTVVHTVSLHEIDVINSRTQ 252 Q + LH DV + Q Sbjct: 780 QYSSALKQNSKLHLYDVTTALQQ 802 >1XMS-A nrPDB Length = 356 Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 24/89 (26%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Query: 14 LKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLV 73 L + I LG D ++ S G + A A G+ + GR V + Sbjct: 18 LGQIEKQFGKGSIMRLGEDRSMDVETISTGSLSLDIALGAGGLPM---------GRIVEI 68 Query: 74 AGPPSTGKTALAM---GVSQSLGKDVPFT 99 GP S+GKT L + +Q GK F Sbjct: 69 YGPESSGKTTLTLQVIAAAQREGKTCAFI 97 >1OFI-A nrPDB Length = 310 Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 11/73 (15%) Query: 42 EGMVGQLQARRAAGVILK------MVQN---GTIAGRAVLVAGPPSTGKTALAMGVSQSL 92 + ++GQ A+RA + L+ +Q + + +L+ GP GKT +A +++ Sbjct: 15 QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKL- 73 Query: 93 GKDVPFTAIAGSE 105 + PF + ++ Sbjct: 74 -ANAPFIKVEATK 85 >4YPL-A nrPDB Length = 555 Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 20/33 (60%) Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 +++ GPP GKT+L +++S+ + ++ G Sbjct: 113 LVLVGPPGVGKTSLGRSIARSMNRKFHRISLGG 145 >3QV2-A nrPDB Length = 327 Score = 30.8 bits (68), Expect = 1.5, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 15/130 (11%) Query: 243 EIDVINSRTQGF-LALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEI--VPGVLFIDEVH 299 +I + NSRT+ + +A T EI ++ + + ++ + + E +P L + + Sbjct: 163 DIGIPNSRTRYYVMARLTPFKNEI--QLHQEKESMISNYLDNNVNESYSIPSDLILKKGM 220 Query: 300 MLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTNY--KSPHGLPLDLLDRSIIITTK 357 + DI +D+ + + + G+ Y PH +P+ + + + Sbjct: 221 LFDI--------VGKDDKRTCCFTKSYTKIVEGTGSIYCPIEPHFIPVKKAEDLLNKNLR 272 Query: 358 SYNEQEIKTI 367 + EIK I Sbjct: 273 YFTPNEIKKI 282 >3H0K-A nrPDB Length = 178 Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%) Query: 69 RAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRK 123 + +L+ G P +GK+ A + + G V + + +S+E E L ++ Sbjct: 1 KVILITGMPGSGKSEFAK-LLKERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR 54 >4YPN-A nrPDB Length = 293 Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 9/33 (27%), Positives = 20/33 (60%) Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG 103 +++ GPP GKT+L +++S+ + ++ G Sbjct: 146 LVLVGPPGVGKTSLGRSIARSMNRKFHRISLGG 178 >5BQ5-A nrPDB Length = 189 Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 12/21 (57%) Query: 71 VLVAGPPSTGKTALAMGVSQS 91 +L GPP GKT LA+ + Sbjct: 42 ILFLGPPGIGKTHLAISIGME 62 >4XGC-E nrPDB Length = 460 Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Query: 70 AVLVAGPPSTGKTALAMGVSQSLG--KDVPFTAIAGSEIFSLEL 111 A+ + G TGKTAL + G ++V + E ++ ++ Sbjct: 36 AIYLFGHSGTGKTALTRAFLKECGKRQNVRTAHLNAIECYTTKI 79 >2I3B-A nrPDB Length = 189 Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 67/190 (35%), Gaps = 49/190 (25%) Query: 68 GRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGI 127 R V + GPP GKT L S+ L + G TE + Q R+ IG Sbjct: 1 ARHVFLTGPPGVGKTTLIHKASEVL--KSSGVPVDGF--------YTEEVRQGGRR-IGF 49 Query: 128 KIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKTTDMETIYELGNKMIDGLTKEKVLAG 187 +VV + R ++ ++ + +G ++D + E++ Sbjct: 50 -----------DVVTLSGTRGPL-----SRVGLEPPPGKRECRVGQYVVDLTSFEQLALP 93 Query: 188 DVISIDKASGK------ITKLGRSFARSRDYDAMGADT---------RFVQCPEG----- 227 + + D +SG I ++G+ S+ + T + P+G Sbjct: 94 VLRNADCSSGPGQRVCVIDEIGKMELFSQLFIQAVRQTLSTPGTIILGTIPVPKGKPLAL 153 Query: 228 --ELQKRKTV 235 E++ RK V Sbjct: 154 VEEIRNRKDV 163 >1IM2-A nrPDB Length = 444 Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 11/73 (15%) Query: 42 EGMVGQLQARRAAGVILK------MVQN---GTIAGRAVLVAGPPSTGKTALAMGVSQSL 92 + ++GQ A+RA + L+ +Q + + +L+ GP GKT +A +++ Sbjct: 15 QHIIGQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKL- 73 Query: 93 GKDVPFTAIAGSE 105 + PF + ++ Sbjct: 74 -ANAPFIKVEATK 85 >1Y63-A nrPDB Length = 184 Score = 30.4 bits (67), Expect = 1.9, Method: Composition-based stats. Identities = 10/25 (40%), Positives = 16/25 (64%) Query: 68 GRAVLVAGPPSTGKTALAMGVSQSL 92 G +L+ G P TGKT++A ++ L Sbjct: 10 GINILITGTPGTGKTSMAEMIAAEL 34 >5L3R-A nrPDB Length = 301 Score = 30.0 bits (66), Expect = 2.2, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Query: 28 GLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMG 87 G+G+ ++P +V + G + ++ Q +L+AG GKT + Sbjct: 67 GMGVIRGVKPDQQLVKIVHDELVKLMGGEVSEL-QFAKSGPTVILLAGLQGVGKTTVCAK 125 Query: 88 VSQSLGKDVPFTAIAGSEIF 107 ++ L K + +++ Sbjct: 126 LACYLKKQGKSCMLIAGDVY 145 >3PXI-A nrPDB Length = 758 Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%) Query: 61 VQNGTIAGRAVLVAGPPSTGKTALAMGVSQSL-GKDVPFTAIAGSEIFSLELSKTEALTQ 119 +++ + + GP GKT LA +++S+ G + I SE + LT+ Sbjct: 514 LKDPKRPIGSFIFLGPTGVGKTELARALAESIFGDEESMIRIDMSEYMEKHSTSGGQLTE 573 Query: 120 AFRK 123 R+ Sbjct: 574 KVRR 577 Score = 28.1 bits (61), Expect = 7.9, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 72 LVAGPPSTGKTALAMGVSQSL 92 ++ G P GKTA+A G++Q + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQI 225 >2EEY-A nrPDB Length = 162 Score = 30.0 bits (66), Expect = 2.3, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 2/75 (2%) Query: 159 TIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAM--G 216 T++ +T + ++ + +T + GDV+++ + +G + + + M G Sbjct: 24 TVRVAVAQTSVTVSREIYEKMTSNAIEKGDVLAVAQVAGVMAAKKTADLIPMCHPLMLKG 83 Query: 217 ADTRFVQCPEGELQK 231 D F +GE K Sbjct: 84 VDIAFAWENDGEAHK 98 >6QUZ-B nrPDB Length = 599 Score = 30.0 bits (66), Expect = 2.4, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%) Query: 57 ILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 +LK + G+ V + GP +GKT + + + D + G +I ++ S Sbjct: 370 VLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRS---- 425 Query: 117 LTQAFRKSIGIKIKEE 132 + R SIGI +++ Sbjct: 426 ---SLRSSIGIVLQDT 438 >3BGW-A nrPDB Length = 444 Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEAL 117 VL+A PS GKTA A+ ++++ + + SLE+ K E + Sbjct: 200 VLIAARPSMGKTAFALKQAKNMSDNDDVV-----NLHSLEMGKKENI 241 >2Q6T-A nrPDB Length = 444 Score = 29.6 bits (65), Expect = 2.8, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%) Query: 46 GQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSE 105 G++ R L + G ++A P+ GKTA A+ ++Q+ G Sbjct: 178 GEVAGVRTGFKELDQLIGTLGPGSLNIIAARPAMGKTAFALTIAQNAALKEG----VGVG 233 Query: 106 IFSLEL 111 I+SLE+ Sbjct: 234 IYSLEM 239 >1Y9Q-A nrPDB Length = 192 Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 4/89 (4%) Query: 27 TGLGLDENLQPRPTSEGMVGQLQARRAAGVILKM--VQNGTIAGRAVLVAGPPS--TGKT 82 GL LD Q S+ M+GQ++ ++ I + + +G A + A P + + Sbjct: 23 RGLSLDATAQLTGVSKAMLGQIERGESSPTIATLWKIASGLEASFSAFFANDPQLLSSER 82 Query: 83 ALAMGVSQSLGKDVPFTAIAGSEIFSLEL 111 + ++ + P+ A G EIF + L Sbjct: 83 SFPDDLNMKIHTLFPYAADTGLEIFEITL 111 >1SGW-A nrPDB Length = 214 Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 34/154 (22%), Positives = 60/154 (38%), Gaps = 23/154 (14%) Query: 57 ILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGK--------DVPFTAIAGSEIFS 108 +L+ + G V GP GKT L +S L VP T + G F Sbjct: 24 VLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPITKVKGKIFFL 83 Query: 109 LE--LSKTEALTQAFRKSI----GIKIKEETELIEGEVVEIQIDRSITGGHKQGKLTIKT 162 E + + + + K++ G+K+ + + E VE+ + G QG TI+ Sbjct: 84 PEEIIVPRKISVEDYLKAVASLYGVKVNKNEIMDALESVEVLDLKKKLGELSQG--TIRR 141 Query: 163 TDMETIYELGNKMIDGLTKEKVLAGDVISIDKAS 196 + + + ++ VL V++ID+ S Sbjct: 142 VQLASTLLVNAEIY-------VLDDPVVAIDEDS 168 >3BH0-A nrPDB Length = 315 Score = 29.6 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 5/47 (10%) Query: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEAL 117 VL+A PS GKTA A+ ++++ + + SLE+ K E + Sbjct: 71 VLIAARPSMGKTAFALKQAKNMSDNDDVV-----NLHSLEMGKKENI 112 >4HSE-A nrPDB Length = 397 Score = 29.6 bits (65), Expect = 3.0, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 22/41 (53%) Query: 72 LVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 ++ G P GKTA+ G++Q + K + G I SL++ Sbjct: 58 VLIGEPGVGKTAIVEGLAQRIVKGDVPEGLKGKRIVSLQMG 98 >6BPM-C nrPDB Length = 727 Score = 29.6 bits (65), Expect = 3.1, Method: Composition-based stats. Identities = 34/129 (26%), Positives = 46/129 (35%), Gaps = 18/129 (13%) Query: 54 AGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAG--SEIFSLE- 110 AG + + +NG + + PP ALA S + F SEI + Sbjct: 484 AGALYHLTENGNVYINYAVSQQPPGGNNFALAQSGSGNSANRTDFKPQKANTSEIGTKWQ 543 Query: 111 -LSKTEALTQA-FRKSIGIKI------------KEETELIEGEVV-EIQIDRSITGGHKQ 155 L K LT A FR I ++ K+ E E V I + GG+ Q Sbjct: 544 VLDKRLLLTAALFRTDIENEVEQNDDGTYSQYGKKRVEGYEISVAGNITPAWQVIGGYTQ 603 Query: 156 GKLTIKTTD 164 K TIK Sbjct: 604 QKATIKNGK 612 >1E94-E nrPDB Length = 449 Score = 29.6 bits (65), Expect = 3.2, Method: Composition-based stats. Identities = 14/72 (19%), Positives = 34/72 (47%), Gaps = 13/72 (18%) Query: 44 MVGQLQARRAAGVIL----------KMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLG 93 ++GQ A+R+ + L + +++ + +L+ GP GKT +A +++ Sbjct: 23 IIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTP-KNILMIGPTGVGKTEIARRLAKL-- 79 Query: 94 KDVPFTAIAGSE 105 + PF + ++ Sbjct: 80 ANAPFIKVEATK 91 >6ED3-A nrPDB Length = 848 Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 4/53 (7%) Query: 44 MVGQLQARRAAGVILKMVQNGTI----AGRAVLVAGPPSTGKTALAMGVSQSL 92 ++GQ A A ++ + G A + GP GKT LA ++ L Sbjct: 572 VIGQKAAVTAVSDAVRRSRAGVSDPNRPTGAFMFLGPTGVGKTELAKALADFL 624 >4M4W-J nrPDB Length = 317 Score = 29.6 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 7/41 (17%), Positives = 18/41 (43%), Gaps = 2/41 (4%) Query: 57 ILKMVQN--GTIAGRAVLVAGPPSTGKTALAMGVSQSLGKD 95 + +++ T G+ + + G GKT + ++ L + Sbjct: 148 VTDFLKSYNETGKGKGLYLYGKFGVGKTFMLAAIANELAEK 188 >6E11-1 nrPDB Length = 906 Score = 29.3 bits (64), Expect = 3.7, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 6/89 (6%) Query: 42 EGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAI 101 +G+ G+ + RA +I +++ + ++ G P TGKT + G+ + K + Sbjct: 207 QGIYGRDEEIRA--IIESLLRYNKNSP---VLVGNPGTGKTTIVEGLVYRIEKGDVPKEL 261 Query: 102 AGSEIFSLELSKTEALTQAFRKSIGIKIK 130 G + SL K + T ++R ++K Sbjct: 262 QGYTVISLNFRKFTSGT-SYRGEFETRMK 289 >4EUN-A nrPDB Length = 200 Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats. Identities = 11/27 (40%), Positives = 15/27 (55%) Query: 67 AGRAVLVAGPPSTGKTALAMGVSQSLG 93 R V+V G +GKT +A GV+ G Sbjct: 28 PTRHVVVMGVSGSGKTTIAHGVADETG 54 >4Q7L-A nrPDB Length = 256 Score = 29.3 bits (64), Expect = 4.0, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%) Query: 57 ILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEA 116 +LK + G+ V + GP +GKT + + + D + G +I ++ S Sbjct: 20 VLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRS---- 75 Query: 117 LTQAFRKSIGIKIKEE 132 + R SIGI +++ Sbjct: 76 ---SLRSSIGIVLQDT 88 >2GP4-A nrPDB Length = 628 Score = 28.9 bits (63), Expect = 5.2, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 25/47 (53%) Query: 156 GKLTIKTTDMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKL 202 G+++ + + L + IDG KV GD+I +D +G+++ L Sbjct: 530 GRMSGASGKVPAAIHLTPEAIDGGLIAKVQDGDLIRVDALTGELSLL 576 >2VIX-A nrPDB Length = 294 Score = 28.9 bits (63), Expect = 5.3, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 6/73 (8%) Query: 348 LDRSIIITTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKT------GVETSLRYSSN 401 LDR I K Y + +L++R E +L+++ ++LLTK G E S+ N Sbjct: 42 LDRDFIDRLKRYFKDPSDQVLALRELLNEKDLTAEQVELLTKIINEIISGSEKSVNAGIN 101 Query: 402 LISVAQQIAMKRK 414 A+ K K Sbjct: 102 SAIQAKLFGNKMK 114 >1XP8-A nrPDB Length = 366 Score = 28.9 bits (63), Expect = 5.3, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 26/64 (40%), Gaps = 9/64 (14%) Query: 68 GRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGI 127 GR + GP S GKT LA+ + K A +E AL + +++G+ Sbjct: 74 GRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAE---------HALDPVYARALGV 124 Query: 128 KIKE 131 E Sbjct: 125 NTDE 128 >6D00-1 nrPDB Length = 883 Score = 28.9 bits (63), Expect = 5.5, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 25/41 (60%), Gaps = 3/41 (7%) Query: 73 VAGPPSTGKTALAMGVSQSLGK-DVPFTAIAGSEIFSLELS 112 + G P GKTA+A G++ + K D+P + +++SL++ Sbjct: 204 LVGEPGVGKTAIAEGLANRIVKGDIP--SSLQKKVYSLDIG 242 >4CIU-A nrPDB Length = 727 Score = 28.5 bits (62), Expect = 6.1, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 44 MVGQLQARRAAGVILKMVQNGTI-AGRAV---LVAGPPSTGKTALAMGVSQ 90 ++GQ +A A ++ + G R + L GP GKT L ++ Sbjct: 428 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 478 Score = 28.5 bits (62), Expect = 6.4, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%) Query: 72 LVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 ++ G P GKTA+ G++Q + + G + +L++ Sbjct: 61 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 101 >3Q8X-B nrPDB Length = 287 Score = 28.5 bits (62), Expect = 6.1, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 59 KMVQNGTI--AGRAVLVAGPPSTGKTALAMGVSQSLGKDV 96 +++Q + A L+ G P +GKT+L + + +V Sbjct: 22 ELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNV 61 >5OFO-C nrPDB Length = 871 Score = 28.5 bits (62), Expect = 6.2, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 4/51 (7%) Query: 44 MVGQLQARRAAGVILKMVQNGTI-AGRAV---LVAGPPSTGKTALAMGVSQ 90 ++GQ +A A ++ + G R + L GP GKT L ++ Sbjct: 574 VIGQNEAVDAVSNAIRRSRAGLADPNRPIGSFLFLGPTGVGKTELCKALAN 624 Score = 28.5 bits (62), Expect = 6.8, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%) Query: 72 LVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 ++ G P GKTA+ G++Q + + G + +L++ Sbjct: 207 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 247 >6IC4-I nrPDB Length = 233 Score = 28.5 bits (62), Expect = 6.5, Method: Composition-based stats. Identities = 17/65 (26%), Positives = 24/65 (36%) Query: 45 VGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGS 104 V L R VI + G+ + GP TGKT L + L D + G Sbjct: 4 VKNLSFNRGERVIYDNISLNIRRGQITAIMGPSGTGKTTLLRLIGGQLVPDQGEVLLDGK 63 Query: 105 EIFSL 109 +I + Sbjct: 64 DIAQM 68 >1JBK-A nrPDB Length = 195 Score = 28.5 bits (62), Expect = 7.0, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 21/41 (51%) Query: 72 LVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELS 112 ++ G P GKTA+ G++Q + + G + +L++ Sbjct: 47 VLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMG 87 >3J3U-A nrPDB Length = 810 Score = 28.5 bits (62), Expect = 7.1, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 72 LVAGPPSTGKTALAMGVSQSL 92 ++ G P GKTA+A G++Q + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQI 225 >3SYK-A nrPDB Length = 309 Score = 28.1 bits (61), Expect = 8.0, Method: Composition-based stats. Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 12/104 (11%) Query: 29 LGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGV 88 +GL + ++ +AR+ G+ + G P TGKT +A+ + Sbjct: 34 IGLKPVKDRIRETAALLLVERARQKLGL------AHETPTLHMSFTGNPGTGKTTVALKM 87 Query: 89 S---QSLG--KDVPFTAIAGSEIFSLELSKTEALT-QAFRKSIG 126 + LG + ++ ++ + T T + ++++G Sbjct: 88 AGLLHRLGYVRKGHLVSVTRDDLVGQYIGHTAPKTKEVLKRAMG 131 >3PXG-A nrPDB Length = 468 Score = 28.1 bits (61), Expect = 8.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 72 LVAGPPSTGKTALAMGVSQSL 92 ++ G P GKTA+A G++Q + Sbjct: 205 VLIGEPGVGKTAIAEGLAQQI 225 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.135 0.342 Lambda K H 0.267 0.0411 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,717,487 Number of Sequences: 36641 Number of extensions: 596317 Number of successful extensions: 2172 Number of sequences better than 10.0: 178 Number of HSP's better than 10.0 without gapping: 187 Number of HSP's successfully gapped in prelim test: 112 Number of HSP's that attempted gapping in prelim test: 1877 Number of HSP's gapped (non-prelim): 365 length of query: 471 length of database: 10,336,785 effective HSP length: 101 effective length of query: 370 effective length of database: 6,636,044 effective search space: 2455336280 effective search space used: 2455336280 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.5 bits) S2: 61 (28.1 bits)