BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q12046 (339 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5LJ5-M nrPDB 702 0.0 3U1M-A nrPDB 507 e-144 3JB9-Y nrPDB 176 1e-44 6ID0-O nrPDB 47 1e-05 6QDV-M nrPDB 45 6e-05 2YTC-A nrPDB 38 0.006 5ZWN-V nrPDB 32 0.34 2LEC-A nrPDB 30 1.5 2KG7-B nrPDB 30 1.8 5MDU-A nrPDB 30 1.9 2KN4-A nrPDB 29 2.9 6EM1-o nrPDB 29 2.9 1FXL-A nrPDB 28 7.9 >5LJ5-M nrPDB Length = 339 Score = 702 bits (1813), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG Sbjct: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 Query: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY Sbjct: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 Query: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN Sbjct: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 Query: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE Sbjct: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 Query: 241 ELKLESLNMMVHLINNNTNSAGTEVNNKNNERLDRTFPEASVDNVKKRLLPLDNGMESDD 300 ELKLESLNMMVHLINNNTNSAGTEVNNKNNERLDRTFPEASVDNVKKRLLPLDNGMESDD Sbjct: 241 ELKLESLNMMVHLINNNTNSAGTEVNNKNNERLDRTFPEASVDNVKKRLLPLDNGMESDD 300 Query: 301 FIEKLKKVKKNISRENISSKPSVGKLGGPLLDYLSSDED 339 FIEKLKKVKKNISRENISSKPSVGKLGGPLLDYLSSDED Sbjct: 301 FIEKLKKVKKNISRENISSKPSVGKLGGPLLDYLSSDED 339 >3U1M-A nrPDB Length = 240 Score = 507 bits (1306), Expect = e-144, Method: Compositional matrix adjust. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG Sbjct: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 Query: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY Sbjct: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 Query: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN Sbjct: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 Query: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE Sbjct: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 >3JB9-Y nrPDB Length = 388 Score = 176 bits (446), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 98/235 (41%), Positives = 134/235 (57%), Gaps = 27/235 (11%) Query: 23 PAQTGLTFNIWYNKWSQGFAGN---TRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKG 79 P Q G +N+WYNKWS G + ++ S SG T+ D + FFCL+FA+G Sbjct: 64 PEQPGQVYNLWYNKWSGGMRQDPLKSQVKSETRCVISRDSGYTKADKNPGSFFCLYFARG 123 Query: 80 MCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRKKNKTLYV 139 MC G KCEYLH +P + D + DCFGREK ADYR+DMGG+GSF ++N TLYV Sbjct: 124 MCSEGSKCEYLHRLPKDTDFFNANV-----DCFGREKHADYRDDMGGVGSFLRQNYTLYV 178 Query: 140 GGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAM 199 GGI + IE + F+ GDI+RIR + S+ F+ + +ANA+FAKEAM Sbjct: 179 GGITPTDD--------IEEIVSRHFAEWGDIERIRVLNSRGIAFITYLNEANAQFAKEAM 230 Query: 200 SNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQEELKLESLNMMVHLI 254 ++Q+L D E L V+WA DP+PA+Q R Q L+ + N + L+ Sbjct: 231 AHQSL---------DHDE--CLNVRWATTDPNPASQARNQRRLEERAANAVKKLL 274 >6ID0-O nrPDB Length = 420 Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 27/161 (16%) Query: 72 FCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFG-----REKFADYREDMGG 126 C F+ KG C G +C Y H P + D LA + +G +K M Sbjct: 164 ICSFWVKGECKRGEECPYRHEKPTDPD-DPLADQNIKDRYYGINDPVADKLLKRASTMPR 222 Query: 127 IGSFRKKN-KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVK 185 + K TLYVGG+ + E+ +R F + G+I I V+ + C F++ Sbjct: 223 LDPPEDKTITTLYVGGLGDTIT---------ETDLRNHFYQFGEIRTITVVQRQQCAFIQ 273 Query: 186 FKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWA 226 F + AE A E N+ ++ G L VKW Sbjct: 274 FATRQAAEVAAEKSFNKLIV-----------NGRRLNVKWG 303 >6QDV-M nrPDB Length = 289 Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 27/161 (16%) Query: 72 FCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFG-----REKFADYREDMGG 126 C F+ KG C G +C Y H P + D LA + +G +K M Sbjct: 147 ICSFWVKGECKRGEECPYRHEKPTDPD-DPLADQNIKDRYYGINDPVADKLLKRASTMPR 205 Query: 127 IGSFRKKN-KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVK 185 + K TLYVGG+ + E+ +R F + G+I I V+ + C F++ Sbjct: 206 LDPPEDKTITTLYVGGLGDTIT---------ETDLRNHFYQFGEIRTITVVQRQQCAFIQ 256 Query: 186 FKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWA 226 F + AE A E N+ ++ G L VKW Sbjct: 257 FATRQAAEVAAEKSFNKLIV-----------NGRRLNVKWG 286 >2YTC-A nrPDB Length = 85 Score = 37.7 bits (86), Expect = 0.006, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 40/91 (43%), Gaps = 20/91 (21%) Query: 136 TLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFA 195 TLYVGG+ + E+ +R F + G+I I V+ + C F++F + AE A Sbjct: 14 TLYVGGLGDTIT---------ETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVA 64 Query: 196 KEAMSNQTLLLPSDKEWDDRREGTGLLVKWA 226 E N+ ++ G L VKW Sbjct: 65 AEKSFNKLIV-----------NGRRLNVKWG 84 >5ZWN-V nrPDB Length = 523 Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 9/66 (13%) Query: 134 NKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAE 193 N T+++GG+ + E +R F G I ++ K CGFV++ + +AE Sbjct: 312 NTTVFIGGLSSLV---------TEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAE 362 Query: 194 FAKEAM 199 A M Sbjct: 363 AAIAGM 368 >2LEC-A nrPDB Length = 135 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Query: 164 FSRLGD--IDRIRYV-ESKNCGFVKFKYQANAEFAKEAMSNQTL 204 + R+GD I R RY ES+ FV+F + +AE A +AM L Sbjct: 71 YGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVL 114 >2KG7-B nrPDB Length = 97 Score = 29.6 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 10/32 (31%), Positives = 20/32 (62%) Query: 9 AKVQVKESELPSSIPAQTGLTFNIWYNKWSQG 40 A++ V+++ L S+ TG+T+ W +W+Q Sbjct: 31 AEIAVEQAALQSAWQGDTGITYQAWQAQWNQA 62 >5MDU-A nrPDB Length = 157 Score = 29.6 bits (65), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 129 SFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKY 188 S + ++TL++GGI ++ E +R +F R G + + + GF+K Sbjct: 17 SIKVYSRTLFLGGITRSVR---------EPVLRSMFERFGSVQSLILNHNYRHGFLKMFR 67 Query: 189 QANAEFAKEAMSN 201 + AE A+ AM N Sbjct: 68 RDAAEKAQVAMEN 80 >2KN4-A nrPDB Length = 158 Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Query: 164 FSRLGD--IDRIRYV-ESKNCGFVKFKYQANAEFAKEAMSNQTL 204 + R+GD I R RY ES+ FV+F + +AE A +AM L Sbjct: 94 YGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVL 137 >6EM1-o nrPDB Length = 220 Score = 28.9 bits (63), Expect = 2.9, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 6/55 (10%) Query: 157 ESRIRFVFSRLGDIDRIRYVE------SKNCGFVKFKYQANAEFAKEAMSNQTLL 205 E + F++ GD+ +R S++ GF++F + +A A+E+M+N L+ Sbjct: 104 EKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQESMNNYLLM 158 >1FXL-A nrPDB Length = 167 Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 5/71 (7%) Query: 133 KNKTLYVGGIDGALNSKHLKPAQIESRI-RFVFSRLGDIDRIRYVESKNCGFVKFKYQAN 191 ++ LYV G+ + K L+ Q+ S+ R + SR+ +D++ V S+ GF++F + Sbjct: 87 RDANLYVSGLPKTMTQKELE--QLFSQYGRIITSRI-LVDQVTGV-SRGVGFIRFDKRIE 142 Query: 192 AEFAKEAMSNQ 202 AE A + ++ Q Sbjct: 143 AEEAIKGLNGQ 153 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5LJ5-M nrPDB 624 e-179 3U1M-A nrPDB 435 e-122 3JB9-Y nrPDB 334 2e-92 6ID0-O nrPDB 197 4e-51 6QDV-M nrPDB 194 6e-50 Sequences not found previously or not previously below threshold: 2YTC-A nrPDB 106 2e-23 3NNA-A nrPDB 44 9e-05 4LMZ-A nrPDB 43 2e-04 6EM1-o nrPDB 41 7e-04 5ZWN-V nrPDB 41 8e-04 3JB9-a nrPDB 39 0.003 3NNH-A nrPDB 37 0.013 6DNH-C nrPDB 37 0.015 2MYF-A nrPDB 36 0.018 5ZWN-Q nrPDB 36 0.024 6G90-B nrPDB 36 0.029 6EOJ-B nrPDB 36 0.030 5ZWM-4 nrPDB 36 0.031 6AH0-4 nrPDB 35 0.043 5MDU-A nrPDB 35 0.044 2BZ2-A nrPDB 34 0.082 2MGZ-B nrPDB 34 0.089 2DGP-A nrPDB 34 0.10 4EGL-A nrPDB 34 0.10 1X5P-A nrPDB 32 0.24 2DGQ-A nrPDB 32 0.25 1FXL-A nrPDB 32 0.26 6GML-X nrPDB 32 0.26 1FNX-H nrPDB 32 0.34 5EN1-A nrPDB 32 0.41 4CS7-A nrPDB 32 0.46 2CJK-A nrPDB 32 0.53 3MDF-A nrPDB 31 0.86 2DH8-A nrPDB 31 1.1 1D9A-A nrPDB 31 1.2 6C8U-1 nrPDB 30 1.8 5XSY-B nrPDB 30 2.0 5YZG-w nrPDB 29 2.3 3EX7-B nrPDB 29 2.3 2J0Q-D nrPDB 29 2.3 6HA9-A nrPDB 29 2.4 2KU7-A nrPDB 29 2.4 6NCZ-A nrPDB 29 4.3 2NVU-B nrPDB 29 4.4 1YOV-B nrPDB 29 4.4 >5LJ5-M nrPDB Length = 339 Score = 624 bits (1610), Expect = e-179, Method: Composition-based stats. Identities = 339/339 (100%), Positives = 339/339 (100%) Query: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG Sbjct: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 Query: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY Sbjct: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 Query: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN Sbjct: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 Query: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE Sbjct: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 Query: 241 ELKLESLNMMVHLINNNTNSAGTEVNNKNNERLDRTFPEASVDNVKKRLLPLDNGMESDD 300 ELKLESLNMMVHLINNNTNSAGTEVNNKNNERLDRTFPEASVDNVKKRLLPLDNGMESDD Sbjct: 241 ELKLESLNMMVHLINNNTNSAGTEVNNKNNERLDRTFPEASVDNVKKRLLPLDNGMESDD 300 Query: 301 FIEKLKKVKKNISRENISSKPSVGKLGGPLLDYLSSDED 339 FIEKLKKVKKNISRENISSKPSVGKLGGPLLDYLSSDED Sbjct: 301 FIEKLKKVKKNISRENISSKPSVGKLGGPLLDYLSSDED 339 >3U1M-A nrPDB Length = 240 Score = 435 bits (1117), Expect = e-122, Method: Composition-based stats. Identities = 240/240 (100%), Positives = 240/240 (100%) Query: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG Sbjct: 1 MTSWRDKSAKVQVKESELPSSIPAQTGLTFNIWYNKWSQGFAGNTRFVSPFALQPQLHSG 60 Query: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY Sbjct: 61 KTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADY 120 Query: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN Sbjct: 121 REDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKN 180 Query: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE Sbjct: 181 CGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQE 240 >3JB9-Y nrPDB Length = 388 Score = 334 bits (857), Expect = 2e-92, Method: Composition-based stats. Identities = 98/235 (41%), Positives = 134/235 (57%), Gaps = 27/235 (11%) Query: 23 PAQTGLTFNIWYNKWSQGFAGN---TRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKG 79 P Q G +N+WYNKWS G + ++ S SG T+ D + FFCL+FA+G Sbjct: 64 PEQPGQVYNLWYNKWSGGMRQDPLKSQVKSETRCVISRDSGYTKADKNPGSFFCLYFARG 123 Query: 80 MCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRKKNKTLYV 139 MC G KCEYLH +P + D + DCFGREK ADYR+DMGG+GSF ++N TLYV Sbjct: 124 MCSEGSKCEYLHRLPKDTDFFNANV-----DCFGREKHADYRDDMGGVGSFLRQNYTLYV 178 Query: 140 GGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAM 199 GGI + IE + F+ GDI+RIR + S+ F+ + +ANA+FAKEAM Sbjct: 179 GGITPTDD--------IEEIVSRHFAEWGDIERIRVLNSRGIAFITYLNEANAQFAKEAM 230 Query: 200 SNQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQEELKLESLNMMVHLI 254 ++Q+L D E L V+WA DP+PA+Q R Q L+ + N + L+ Sbjct: 231 AHQSL---------DHDE--CLNVRWATTDPNPASQARNQRRLEERAANAVKKLL 274 >6ID0-O nrPDB Length = 420 Score = 197 bits (501), Expect = 4e-51, Method: Composition-based stats. Identities = 51/220 (23%), Positives = 82/220 (37%), Gaps = 35/220 (15%) Query: 40 GFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKGMCCLGPKCEYLHHIPDEEDI 99 G G S L+ + + + C F+ KG C G +C Y H P + D Sbjct: 135 GMLGKATSTSDMLLKLARTTPYYKRNR---PHICSFWVKGECKRGEECPYRHEKPTDPD- 190 Query: 100 GKLALRTEVLDCFG-----REKFADYREDMGGIGSFRKKN-KTLYVGGIDGALNSKHLKP 153 LA + +G +K M + K TLYVGG+ + Sbjct: 191 DPLADQNIKDRYYGINDPVADKLLKRASTMPRLDPPEDKTITTLYVGGLGDTIT------ 244 Query: 154 AQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQANAEFAKEAMSNQTLLLPSDKEWD 213 E+ +R F + G+I I V+ + C F++F + AE A E N+ ++ Sbjct: 245 ---ETDLRNHFYQFGEIRTITVVQRQQCAFIQFATRQAAEVAAEKSFNKLIV-------- 293 Query: 214 DRREGTGLLVKWANEDPDPAAQKRLQEELKLESLNMMVHL 253 G L VKW + R +E+ K + + + L Sbjct: 294 ---NGRRLNVKWGR-----SQAARGKEKEKDGTTDSGIKL 325 >6QDV-M nrPDB Length = 289 Score = 194 bits (492), Expect = 6e-50, Method: Composition-based stats. Identities = 43/161 (26%), Positives = 64/161 (39%), Gaps = 27/161 (16%) Query: 72 FCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFG-----REKFADYREDMGG 126 C F+ KG C G +C Y H P + D LA + +G +K M Sbjct: 147 ICSFWVKGECKRGEECPYRHEKPTDPD-DPLADQNIKDRYYGINDPVADKLLKRASTMPR 205 Query: 127 IGSFRKKN-KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVK 185 + K TLYVGG+ + E+ +R F + G+I I V+ + C F++ Sbjct: 206 LDPPEDKTITTLYVGGLGDTIT---------ETDLRNHFYQFGEIRTITVVQRQQCAFIQ 256 Query: 186 FKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWA 226 F + AE A E N+ ++ G L VKW Sbjct: 257 FATRQAAEVAAEKSFNKLIV-----------NGRRLNVKWG 286 >2YTC-A nrPDB Length = 85 Score = 106 bits (263), Expect = 2e-23, Method: Composition-based stats. Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 21/99 (21%) Query: 129 SFRKKN-KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFK 187 S K TLYVGG+ + E+ +R F + G+I I V+ + C F++F Sbjct: 6 SGEDKTITTLYVGGLGDTIT---------ETDLRNHFYQFGEIRTITVVQRQQCAFIQFA 56 Query: 188 YQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWA 226 + AE A E N+ ++ G L VKW Sbjct: 57 TRQAAEVAAEKSFNKLIV-----------NGRRLNVKWG 84 >3NNA-A nrPDB Length = 175 Score = 44.0 bits (102), Expect = 9e-05, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%) Query: 157 ESRIRFVFSRLGDIDRIRYVE-----SKNCGFVKFKYQANAEFAKEAM 199 E+ IR +FS G I+ R + S+ C FV F +A A+ A +AM Sbjct: 109 ENDIRVMFSSFGQIEECRILRGPDGLSRGCAFVTFTTRAMAQTAIKAM 156 Score = 38.3 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 17/84 (20%) Query: 157 ESRIRFVFSRLGDIDRIRYV--------ESKNCGFVKFKYQANAEFAKEAMSNQTLLL-- 206 E +R +F + G + I + +SK C FV F + A A+ A+ N +L Sbjct: 17 EKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGM 76 Query: 207 -------PSDKEWDDRREGTGLLV 223 P+D E ++ E L + Sbjct: 77 HHPIQMKPADSEKNNAVEDRKLFI 100 >4LMZ-A nrPDB Length = 180 Score = 43.3 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 6/52 (11%) Query: 157 ESRIRFVFSRLGDIDRIRYVE-----SKNCGFVKFKYQANAEFAKEAMSNQT 203 E+ IR +FS G I+ R + S+ C FV F +A A+ A +AM +Q+ Sbjct: 114 ENDIRVMFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAM-HQS 164 Score = 32.9 bits (73), Expect = 0.20, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 17/84 (20%) Query: 157 ESRIRFVFSRLGDIDRIRYV--------ESKNCGFVKFKYQANAEFAKEA---------M 199 E ++ +F G + +I + +SK C FV F + A A+ A M Sbjct: 22 EKELKELFEPYGAVYQINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNIKTLPGM 81 Query: 200 SNQTLLLPSDKEWDDRREGTGLLV 223 + + P+D E + E L + Sbjct: 82 HHPIQMKPADSEKSNAVEDRKLFI 105 >6EM1-o nrPDB Length = 220 Score = 41.0 bits (94), Expect = 7e-04, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 15/118 (12%) Query: 143 DGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFKYQANAEFAK 196 G + L E + F++ GD+ +R S++ GF++F + +A A+ Sbjct: 90 SGIIYVSRLPHGFHEKELSKYFAQFGDLKEVRLARNKKTGNSRHYGFLEFVNKEDAMIAQ 149 Query: 197 EAMSNQTL---------LLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRLQEELKLE 245 E+M+N L L K + +LV+ P + ++++ + Sbjct: 150 ESMNNYLLMGHLLQVRVLPKGAKIEKLYKYKKRVLVEKGITKPVKQLKDNMKQKHEER 207 >5ZWN-V nrPDB Length = 523 Score = 41.0 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 10/76 (13%) Query: 125 GGIGSFRK-KNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGF 183 + F N T+++GG+ + E +R F G I ++ K CGF Sbjct: 302 PSLNHFTDPNNTTVFIGGLSSLVT---------EDELRAYFQPFGTIVYVKIPVGKCCGF 352 Query: 184 VKFKYQANAEFAKEAM 199 V++ + +AE A M Sbjct: 353 VQYVDRLSAEAAIAGM 368 >3JB9-a nrPDB Length = 354 Score = 39.0 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 42/101 (41%), Gaps = 20/101 (19%) Query: 127 IGSFRKKN-KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVK 185 + + K +L++ G++ L + +IR F + G + + C FV Sbjct: 203 MEPPKDKKIASLFLIGVEDEL---------ADYKIRKHFEQYGPLKSVVCSHRAKCAFVN 253 Query: 186 FKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWA 226 FK +++AE A A + +++ EG L V+W Sbjct: 254 FKTRSSAEIAAAASPDGNVVI----------EGFRLKVQWG 284 >3NNH-A nrPDB Length = 88 Score = 36.7 bits (83), Expect = 0.013, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 8/57 (14%) Query: 157 ESRIRFVFSRLGDIDRIRYV--------ESKNCGFVKFKYQANAEFAKEAMSNQTLL 205 E +R +F + G + I + +SK C FV F + A A+ A+ N +L Sbjct: 17 EKDLRELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVL 73 >6DNH-C nrPDB Length = 245 Score = 36.7 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 22/48 (45%), Gaps = 10/48 (20%) Query: 72 FCLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFAD 119 C + +G+C G +CE+LH T++ +C+ KF + Sbjct: 68 VCKHWLRGLCKKGDQCEFLHEY----------DMTKMPECYFYSKFGE 105 Score = 31.3 bits (69), Expect = 0.64, Method: Composition-based stats. Identities = 9/28 (32%), Positives = 11/28 (39%) Query: 64 GDNDGQLFFCLFFAKGMCCLGPKCEYLH 91 G + C FF K C G C + H Sbjct: 33 GMDKSGAAVCEFFLKAACGKGGMCPFRH 60 >2MYF-A nrPDB Length = 89 Score = 36.3 bits (82), Expect = 0.018, Method: Composition-based stats. Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 27/101 (26%) Query: 134 NKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRY------VESKNCGFVKFK 187 L+VGGID ++ E + +FS GDI I +++ FV++ Sbjct: 10 TDILFVGGIDETID---------EKSLYDIFSSFGDIRNIEVPLNMTTKKNRGFAFVEYV 60 Query: 188 YQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANE 228 +A+ A M+N L G + V ++ Sbjct: 61 EVDDAKHALYNMNNFEL------------NGKRIHVNYSKT 89 >5ZWN-Q nrPDB Length = 300 Score = 35.9 bits (81), Expect = 0.024, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 52/144 (36%), Gaps = 22/144 (15%) Query: 89 YLHHIPDEEDIGKLA-LRTEVLDCFGREKFADYR--EDMGGIGSFRKKN---KTLYVGGI 142 Y+ P+ L L + D R + K +T+++G + Sbjct: 55 YMEEFPEGSPNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRL 114 Query: 143 DGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFKYQANAEFA- 195 L+ E ++ F + G+I++IR V +SK F+ FK +++ A Sbjct: 115 PYDLD---------EIELQKYFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAF 165 Query: 196 KEAMSNQTLLLPSDKEWDDRREGT 219 KE ++ + + D G Sbjct: 166 KEIGVHRGIQIKDRICIVDIERGR 189 >6G90-B nrPDB Length = 300 Score = 35.6 bits (80), Expect = 0.029, Method: Composition-based stats. Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 19/105 (18%) Query: 125 GGIGSFRKKN---KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV----- 176 + K +T+++G + L+ E ++ F + G+I++IR V Sbjct: 94 PNVDPHIKDTDPYRTIFIGRLPYDLD---------EIELQKYFVKFGEIEKIRIVKDKIT 144 Query: 177 -ESKNCGFVKFKYQANAEFA-KEAMSNQTLLLPSDKEWDDRREGT 219 +SK F+ FK +++ A KE ++ + + D G Sbjct: 145 QKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIERGR 189 >6EOJ-B nrPDB Length = 208 Score = 35.6 bits (80), Expect = 0.030, Method: Composition-based stats. Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 7/65 (10%) Query: 72 FCLFFAKGMCCLGPKCEYLHH-----IPDEEDIGKLALRTEVLDCFGREKFADYREDMGG 126 C + +G+C +CEYLH +P+ K T+ DC + D + Sbjct: 66 VCRHWLRGLCKKNDQCEYLHEYNLRKMPECVFFSKNGYCTQSPDC--QYLHIDPASKIPK 123 Query: 127 IGSFR 131 ++ Sbjct: 124 CENYE 128 >5ZWM-4 nrPDB Length = 213 Score = 35.6 bits (80), Expect = 0.031, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 40/95 (42%), Gaps = 15/95 (15%) Query: 132 KKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVES------KNCGFVK 185 T+YVG ID + + ++ +F ++ + RI+Y + + F++ Sbjct: 6 DSGNTVYVGNIDPRIT---------KEQLYELFIQINPVLRIKYPKDKVLQAYQGYAFIE 56 Query: 186 FKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGTG 220 F Q +A++A + M+N L + TG Sbjct: 57 FYNQGDAQYAIKIMNNTVRLYDRLIKVRQVTNSTG 91 >6AH0-4 nrPDB Length = 424 Score = 35.2 bits (79), Expect = 0.043, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 50/109 (45%), Gaps = 11/109 (10%) Query: 129 SFRKKNKTLYVGGIDGALNSKHLKPAQIES--RIRFVFSRLGDIDRIRYVESKNCGFVKF 186 S R ++ T+YVGG+D ++ L +++ + + DR+ + + GFV+F Sbjct: 7 SERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPK----DRVTG-QHQGYGFVEF 61 Query: 187 KYQANAEFAKEAMSNQTL----LLPSDKEWDDRREGTGLLVKWANEDPD 231 + +A++A + M+ L + + ++ G + N DP+ Sbjct: 62 LSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPE 110 Score = 29.8 bits (65), Expect = 1.6, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 21/124 (16%) Query: 131 RKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV-------ESKNCGF 183 +++G +D ++ E + FS G I + + SK F Sbjct: 96 LDVGANIFIGNLDPEID---------EKLLYDTFSAFGVILQTPKIMRDPDTGNSKGYAF 146 Query: 184 VKFKYQANAEFAKEAMS-----NQTLLLPSDKEWDDRREGTGLLVKWANEDPDPAAQKRL 238 + F ++ A EAM+ N+ + + + D + E G + +P +Q Sbjct: 147 INFASFDASDAAIEAMNGQYLCNRPITVSYAFKKDSKGERHGSAAERLLAAQNPLSQADR 206 Query: 239 QEEL 242 +L Sbjct: 207 PHQL 210 >5MDU-A nrPDB Length = 157 Score = 35.2 bits (79), Expect = 0.044, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 9/74 (12%) Query: 128 GSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFK 187 S + ++TL++GGI ++ E +R +F R G + + + GF+K Sbjct: 16 DSIKVYSRTLFLGGITRSVR---------EPVLRSMFERFGSVQSLILNHNYRHGFLKMF 66 Query: 188 YQANAEFAKEAMSN 201 + AE A+ AM N Sbjct: 67 RRDAAEKAQVAMEN 80 >2BZ2-A nrPDB Length = 121 Score = 34.0 bits (76), Expect = 0.082, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Query: 119 DYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVES 178 + + RK N TLYV G D + +R FS G+I + Sbjct: 25 RRSDSFPERRAPRKGN-TLYVYGEDMT-----------PTLLRGAFSPFGNIIDLSMDPP 72 Query: 179 KNCGFVKFKYQANAEFA 195 +NC FV ++ +A+ A Sbjct: 73 RNCAFVTYEKMESADQA 89 >2MGZ-B nrPDB Length = 105 Score = 34.0 bits (76), Expect = 0.089, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 15/77 (19%) Query: 125 GGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ES 178 +GS ++VGG+ + + F + GDI+ + +S Sbjct: 7 PVVGSRDTMFTKIFVGGL---------PYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKS 57 Query: 179 KNCGFVKFKYQANAEFA 195 + GFV K +A+AE A Sbjct: 58 RGYGFVTMKDRASAERA 74 >2DGP-A nrPDB Length = 106 Score = 34.0 bits (76), Expect = 0.10, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 15/81 (18%) Query: 137 LYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESK------NCGFVKFKYQA 190 L++G I L+ K LKP F G I + ++ + C F+ + + Sbjct: 16 LFIGQIPRNLDEKDLKPL---------FEEFGKIYELTVLKDRFTGMHKGCAFLTYCERE 66 Query: 191 NAEFAKEAMSNQTLLLPSDKE 211 +A A+ A+ Q L ++ Sbjct: 67 SALKAQSALHEQKTLPGMNRP 87 >4EGL-A nrPDB Length = 177 Score = 34.0 bits (76), Expect = 0.10, Method: Composition-based stats. Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 15/69 (21%) Query: 133 KNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVE------SKNCGFVKF 186 K+ LY+ G+ + K + +FSR G I R + S+ F++F Sbjct: 87 KDANLYISGLPRTMTQK---------DVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRF 137 Query: 187 KYQANAEFA 195 ++ AE A Sbjct: 138 DKRSEAEEA 146 >1X5P-A nrPDB Length = 97 Score = 32.5 bits (72), Expect = 0.24, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 11/64 (17%) Query: 132 KKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESKNCGFVKFKYQAN 191 +K TLYV G D + +R FS G+I + +NC FV ++ + Sbjct: 13 RKGNTLYVYGEDMT-----------PTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMES 61 Query: 192 AEFA 195 A+ A Sbjct: 62 ADQA 65 >2DGQ-A nrPDB Length = 108 Score = 32.5 bits (72), Expect = 0.25, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 18/93 (19%) Query: 137 LYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVESK------NCGFVKFKYQA 190 L+VG I L+ E ++ +F G I + ++ + C F+ + + Sbjct: 18 LFVGQIPRGLD---------EQDLKPLFEEFGRIYELTVLKDRLTGLHKGCAFLTYCARD 68 Query: 191 NAEFAKEAMSNQTLLLPSDKEWDDR---REGTG 220 +A A+ A+ Q L ++ + EG G Sbjct: 69 SALKAQSALHEQKTLPGMNRPIQVKPAASEGRG 101 >1FXL-A nrPDB Length = 167 Score = 32.5 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 34/84 (40%), Gaps = 17/84 (20%) Query: 125 GGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVE------S 178 S R N LYV G+ + K L+ FS+ G I R + S Sbjct: 81 PSSASIRDAN--LYVSGLPKTMTQKELEQL---------FSQYGRIITSRILVDQVTGVS 129 Query: 179 KNCGFVKFKYQANAEFAKEAMSNQ 202 + GF++F + AE A + ++ Q Sbjct: 130 RGVGFIRFDKRIEAEEAIKGLNGQ 153 >6GML-X nrPDB Length = 404 Score = 32.5 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 12/77 (15%) Query: 119 DYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYVES 178 + + RK N TLYV G D + +R FS G+I + Sbjct: 271 RRSDSFPERRAPRKGN-TLYVYGEDMT-----------PTLLRGAFSPFGNIIDLSMDPP 318 Query: 179 KNCGFVKFKYQANAEFA 195 +NC FV ++ +A+ A Sbjct: 319 RNCAFVTYEKMESADQA 335 >1FNX-H nrPDB Length = 174 Score = 32.1 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 57/178 (32%), Gaps = 34/178 (19%) Query: 31 NIWYNKWSQGFAGNTRFVSPFALQPQLHSGKTRGDNDGQLFFCLFFAKGMCCLGPKCEYL 90 N+ N Q + F S F + S K D F Sbjct: 6 NLIVNYLPQNMTQD-EFKSLFGSIGDIESCKLVRDKITGQSLGYGFVN------------ 52 Query: 91 HHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRKKNKTLYVGGIDGALNSKH 150 + P++ D L L + K S R N LYV G+ ++ K Sbjct: 53 YSDPNDADKAINTLNGLKL----QTKTIKVSYARPSSASIRDAN--LYVSGLPKTMSQKE 106 Query: 151 LKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFKYQANAEFAKEAMSNQ 202 ++ FS+ G I R + S+ GF++F + AE A + ++ Q Sbjct: 107 MEQL---------FSQYGRIITSRILLDQATGVSRGVGFIRFDKRIEAEEAIKGLNGQ 155 >5EN1-A nrPDB Length = 184 Score = 31.7 bits (70), Expect = 0.41, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 29/77 (37%), Gaps = 15/77 (19%) Query: 131 RKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFV 184 +++ + L++GG+ E +R + + G + + S+ GFV Sbjct: 6 KEQFRKLFIGGLS---------FETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFV 56 Query: 185 KFKYQANAEFAKEAMSN 201 F A + A A + Sbjct: 57 TFSSMAEVDAAMAARPH 73 >4CS7-A nrPDB Length = 189 Score = 31.7 bits (70), Expect = 0.46, Method: Composition-based stats. Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 2/64 (3%) Query: 73 CLFFAKGMCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGIGSFRK 132 C + +G C G +C++ H+ D L +L+ R D + + I + Sbjct: 9 CKYEVRGKCNRGSECKFNHNYWSWPDRYLLIRSNYLLNQLLRN--TDRADGLSIISGAGR 66 Query: 133 KNKT 136 +++T Sbjct: 67 EDRT 70 >2CJK-A nrPDB Length = 167 Score = 31.7 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 18/95 (18%) Query: 131 RKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFV 184 + K ++VGGI ++P + E FS+ G I + + +S+ GFV Sbjct: 84 QDKTGKIFVGGIGP-----DVRPKEFEE----FFSQWGTIIDAQLMLDKDTGQSRGFGFV 134 Query: 185 KFKYQANAEFAKEAMSNQTLLLPSDKEWDDRREGT 219 + +A+ N+ + K R E Sbjct: 135 TY---DSADAVDRVCQNKFIDFKDRKIEIKRAEPR 166 >3MDF-A nrPDB Length = 85 Score = 30.9 bits (68), Expect = 0.86, Method: Composition-based stats. Identities = 22/83 (26%), Positives = 34/83 (40%), Gaps = 15/83 (18%) Query: 128 GSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNC 181 GS + LYVGG+ ++ K L A F GDI I+ + + Sbjct: 1 GSMATTKRVLYVGGLAEEVDDKVLHAA---------FIPFGDITDIQIPLDYETEKHRGF 51 Query: 182 GFVKFKYQANAEFAKEAMSNQTL 204 FV+F+ +A A + M+ L Sbjct: 52 AFVEFELAEDAAAAIDNMNESEL 74 >2DH8-A nrPDB Length = 105 Score = 30.6 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 15/57 (26%) Query: 137 LYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFK 187 L+VGG+D + + +R FS+ G++ + +S+ GFVKFK Sbjct: 19 LFVGGLDWSTT---------QETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFK 66 >1D9A-A nrPDB Length = 85 Score = 30.6 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 15/72 (20%) Query: 137 LYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFKYQA 190 LYV G+ ++ K ++ FS+ G I R + S+ GF++F + Sbjct: 4 LYVSGLPKTMSQKEMEQL---------FSQYGRIITSRILLDQATGVSRGVGFIRFDKRI 54 Query: 191 NAEFAKEAMSNQ 202 AE A + ++ Q Sbjct: 55 EAEEAIKGLNGQ 66 >6C8U-1 nrPDB Length = 115 Score = 29.8 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 24/66 (36%), Gaps = 6/66 (9%) Query: 134 NKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFK 187 + LY G + L +R FS+ G+I + S+ GFV F Sbjct: 15 TENLYFQSNAGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFA 74 Query: 188 YQANAE 193 A+ + Sbjct: 75 DPASVD 80 >5XSY-B nrPDB Length = 209 Score = 29.8 bits (65), Expect = 2.0, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 33/91 (36%), Gaps = 6/91 (6%) Query: 115 EKFADYREDMGGIGSFRKKNKTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIR 174 E+F D MG +F ++ ++Y+ ++ LN + + F + R Sbjct: 87 ERFLDRLNWMGSKNTFDLQDGSIYI--LNVTLNDTGTYRCYFDRTLTFNYYEF----RTN 140 Query: 175 YVESKNCGFVKFKYQANAEFAKEAMSNQTLL 205 ++ V + A E M +++ Sbjct: 141 INKTITLNVVPKATRGTASILSEVMMYVSII 171 >5YZG-w nrPDB Length = 174 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 157 ESRIRFVFSRLGDIDRIRYVESKNCGF------VKFKYQANAEFAKEAMSNQTLL-LPSD 209 E I F+ G+I I + G+ V+++ A+ A E ++ Q L+ P Sbjct: 86 EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPIS 145 Query: 210 KEW 212 +W Sbjct: 146 VDW 148 >3EX7-B nrPDB Length = 126 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 157 ESRIRFVFSRLGDIDRIRYVESKNCGF------VKFKYQANAEFAKEAMSNQTLL-LPSD 209 E I F+ G+I I + G+ V+++ A+ A E ++ Q L+ P Sbjct: 36 EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPIS 95 Query: 210 KEW 212 +W Sbjct: 96 VDW 98 >2J0Q-D nrPDB Length = 109 Score = 29.4 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 7/63 (11%) Query: 157 ESRIRFVFSRLGDIDRIRYVESKNCGF------VKFKYQANAEFAKEAMSNQTLL-LPSD 209 E I F+ G+I I + G+ V+++ A+ A E ++ Q L+ P Sbjct: 21 EEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQPIS 80 Query: 210 KEW 212 +W Sbjct: 81 VDW 83 >6HA9-A nrPDB Length = 396 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 14/116 (12%) Query: 181 CGFVKFKYQANAEFAKEAM--SNQTLLLPSDKEW----DDRREGTGL--LVKWANEDPDP 232 + ++ Q +AE + + Q + + D E + +G L + A +D + Sbjct: 96 VAWDQYANQESAEISAAWLNRVKQVVQMAIDNELYVLINIHWDGGWLENNITPAKKDENN 155 Query: 233 AAQKRLQEELKLESLNMMVHLINNNTNSAGTEVNNKNNERLD--RTFPEASVDNVK 286 A QK E++ + HL+ TN+ N +N E++D ++ + VD V+ Sbjct: 156 AKQKAFWEQIATHLRDFDEHLLFAGTNAP----NAENAEQMDVLNSYLQTFVDAVR 207 >2KU7-A nrPDB Length = 140 Score = 29.4 bits (64), Expect = 2.4, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 15/76 (19%) Query: 135 KTLYVGGIDGALNSKHLKPAQIESRIRFVFSRLGDIDRIRYV------ESKNCGFVKFKY 188 + LYVGG+ ++ K L A F GDI I+ + + FV+F+ Sbjct: 64 RVLYVGGLAEEVDDKVLHAA---------FIPFGDITDIQIPLDYETEKHRGFAFVEFEL 114 Query: 189 QANAEFAKEAMSNQTL 204 +A A + M+ L Sbjct: 115 AEDAAAAIDNMNESEL 130 >6NCZ-A nrPDB Length = 610 Score = 28.6 bits (62), Expect = 4.3, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 43/106 (40%), Gaps = 21/106 (19%) Query: 170 IDRIRYVESKNCGFVKFK-YQANAEFAKEAMSNQTLLLPSDKEWDDRREGTGLLVKWANE 228 I+ IR + C F++ Y N E AK A LL W++ + V WA Sbjct: 334 IENIRIAKELGCNFMRLAHYPHNEEMAKLADELGLLL------WEE------IPVYWAI- 380 Query: 229 DPDPAAQKRLQEELKLESLNMMVHLINNNTNSAGTEVNNKNNERLD 274 + +E+ ++ N + LIN + N A + + NE D Sbjct: 381 -------RFEREKTYEDAQNQLRELINRDWNRASVIIWSVGNENAD 419 >2NVU-B nrPDB Length = 805 Score = 28.6 bits (62), Expect = 4.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 19/65 (29%), Gaps = 3/65 (4%) Query: 80 MCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGI-GSFRKKNKTLY 138 C +P A EVLD + I + KN+TLY Sbjct: 699 EAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKS--PAITATLEGKNRTLY 756 Query: 139 VGGID 143 + + Sbjct: 757 LQSVT 761 >1YOV-B nrPDB Length = 444 Score = 28.6 bits (62), Expect = 4.4, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 19/65 (29%), Gaps = 3/65 (4%) Query: 80 MCCLGPKCEYLHHIPDEEDIGKLALRTEVLDCFGREKFADYREDMGGI-GSFRKKNKTLY 138 C +P A EVLD + I + KN+TLY Sbjct: 338 EAERKENCPACSQLPQNIQFSPSAKLQEVLDYLTNSASLQMKS--PAITATLEGKNRTLY 395 Query: 139 VGGID 143 + + Sbjct: 396 LQSVT 400 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.306 0.122 0.333 Lambda K H 0.267 0.0378 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,699,884 Number of Sequences: 36641 Number of extensions: 490329 Number of successful extensions: 1351 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 24 Number of HSP's successfully gapped in prelim test: 51 Number of HSP's that attempted gapping in prelim test: 1281 Number of HSP's gapped (non-prelim): 95 length of query: 339 length of database: 10,336,785 effective HSP length: 98 effective length of query: 241 effective length of database: 6,745,967 effective search space: 1625778047 effective search space used: 1625778047 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 59 (27.5 bits)