BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= Q10423
(258 letters)
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
36,641 sequences; 10,336,785 total letters
Searching..................................................done
Results from round 1
Score E
Sequences producing significant alignments: (bits) Value
1KCF-A nrPDB 538 e-154
5E6F-A nrPDB 35 0.028
2CWO-A nrPDB 31 0.57
5HMP-A nrPDB 30 0.89
4ZLK-A nrPDB 30 1.5
4RYL-A nrPDB 28 3.2
1Z69-A nrPDB 28 4.0
5NGL-A nrPDB 28 4.4
4J15-A nrPDB 28 4.5
1W7I-A nrPDB 27 6.0
>1KCF-A nrPDB
Length = 258
Score = 538 bits (1387), Expect = e-154, Method: Compositional matrix adjust.
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MATVKLSFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQN 60
MATVKLSFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQN
Sbjct: 1 MATVKLSFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQN 60
Query: 61 EDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQR 120
EDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQR
Sbjct: 61 EDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQR 120
Query: 121 YRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLN 180
YRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLN
Sbjct: 121 YRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLN 180
Query: 181 TKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGWMR 240
TKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGWMR
Sbjct: 181 TKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGWMR 240
Query: 241 WQAQLKHYRNFCKQFLKQ 258
WQAQLKHYRNFCKQFLKQ
Sbjct: 241 WQAQLKHYRNFCKQFLKQ 258
>5E6F-A nrPDB
Length = 152
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 20/87 (22%)
Query: 42 VLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQL 101
+ +D+GIKN +Y + EDSKV + EK+ W+++++ + DL+
Sbjct: 4 ICSVDIGIKNPAYTIF-RYEDSKVSLI------AIEKS----DWSDNWEYNVTKDLT--- 49
Query: 102 FNTLHEKFNPHVILMERQRYRSGIATI 128
K+NP +I++E+Q YRS A I
Sbjct: 50 ------KYNPDIIVLEKQGYRSPNAKI 70
>2CWO-A nrPDB
Length = 197
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 7 SFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSY 54
+FL+ C++TGL+R E +R++ ++ S +L ++ FSY
Sbjct: 128 AFLEEYCRITGLAREDALREKMRKVKSVVLFHHSELLKFEVTENMFSY 175
>5HMP-A nrPDB
Length = 750
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 7 SFLQHICKLTGLSRSGRKDELL--RRIVDSP---IYPTSRVLGID----LGIKNFSYCFA 57
S L+ C+L GL SGR + L R+IV S + P +R ++ L K +++ F
Sbjct: 349 SHLKVFCELLGL-ESGRVAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFD 407
Query: 58 SQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNT-LHEKFNPHVILM 116
E + +S + T LDI E F +S I N L ++FN HV +
Sbjct: 408 FIVERINQALQ-FSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKL 466
Query: 117 ERQRYRSGIATIPEWTL 133
E++ Y IP WTL
Sbjct: 467 EQEEYMK--EDIP-WTL 480
>4ZLK-A nrPDB
Length = 839
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 34/150 (22%)
Query: 81 LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRYRSGIATIPEWTL------ 133
LDI E F+ +S I N L ++FN HV +E++ Y IP WTL
Sbjct: 484 LDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMK--EQIP-WTLIDFYDN 540
Query: 134 --RVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWA-----SVLNTKASFS 186
+N++ES L L ++ + PK T WA + LN A F
Sbjct: 541 QPCINLIESKLGILDLLDEECKM-------------PKGTDDTWAQKLYNTHLNKCALFE 587
Query: 187 KKK--SRVQMVKELIDGQKILFENEEALYK 214
K + ++ ++K D K+ ++ E L K
Sbjct: 588 KPRMSNKAFIIKHFAD--KVEYQCEGFLEK 615
>4RYL-A nrPDB
Length = 340
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 128 IPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKST---------YSYWASV 178
I EW + ESML ++ YA+ + + YP + ++S + ++W V
Sbjct: 136 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHADRIAFWDDV 195
Query: 179 LNTKASFSKKKSRVQMVKELIDGQKILFE 207
K S KK + V E++D + ++ E
Sbjct: 196 YGFKMSCMKKAVIPEAVVEVLDPKTLISE 224
>1Z69-A nrPDB
Length = 327
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 163 LLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVE 222
+L L P ++ A + K + K +Q +++ I G+K+ + E + K+ G+++
Sbjct: 89 VLGLGPGDKATFDAMGIAWKKPLATTKEAIQAIRDFISGKKVSMDGE--MIKF-AGAKLA 145
Query: 223 FKKDDM 228
FK ++
Sbjct: 146 FKAGNI 151
>5NGL-A nrPDB
Length = 494
Score = 28.1 bits (61), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/201 (19%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 60 NEDSKVIIHNWS------VENLTEKNGLD-------------------IQWTEDFQPSSM 94
N KVI W+ V++LT++ LD ++W + F+ +
Sbjct: 167 NPSIKVIAAPWTCPKWMKVKSLTDRTPLDSWTNGQLNPDYYQDYATYFVKWIQAFKAEGI 226
Query: 95 ADLSIQLFNTLHEKFNPHVILMERQRYRSGIATIPEWTLRVNMLESMLYALHYAEKRNSI 154
++ N + N + ME + R + T ++ L + +YA + ++I
Sbjct: 227 DIYAVTPQNEPLNRGNSASLYMEWEEQRDFVKTALGPQMKAAGLSTKIYAFDHNYNYDNI 286
Query: 155 EQKIQYPF-LLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALY 213
E + YP + + S Y A+ N + + + + + +++LF E ++
Sbjct: 287 ESQKNYPGKIYEDAAASQYLAGAAYHN----YGGNREELLNIHQAYPEKELLF-TETSIG 341
Query: 214 KWNNGSRVEFK-KDDMADSAL 233
WN+G + + +DM + AL
Sbjct: 342 TWNSGRDLSKRLMEDMEEVAL 362
>4J15-A nrPDB
Length = 521
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%)
Query: 50 KNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQ----PSSMADLSIQLFNTL 105
K FS + EDS H LTE GLDI+ ++ +AD +Q+F L
Sbjct: 284 KVFSIGPVFRAEDSNTHRH------LTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGL 337
Query: 106 HEKFNPHVILMERQRYRSGIATIPEWTLRVNMLESM 141
E+F + + +Q + E TLR+ E++
Sbjct: 338 QERFQTEIQTVNKQ-FPCEPFKFLEPTLRLEYCEAL 372
>1W7I-A nrPDB
Length = 795
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 81 LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRYRSGIATIPEWTL 133
LDI E F+ +S I N L ++FN HV +E++ Y IP WTL
Sbjct: 436 LDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMK--EQIP-WTL 486
Searching..................................................done
Results from round 2
Score E
Sequences producing significant alignments: (bits) Value
Sequences used in model and found again:
1KCF-A nrPDB 546 e-156
Sequences not found previously or not previously below threshold:
5E6F-A nrPDB 37 0.009
5HMP-A nrPDB 32 0.21
4ZLK-A nrPDB 32 0.24
2CWO-A nrPDB 32 0.36
5NGL-A nrPDB 30 0.98
1W7I-A nrPDB 30 1.4
4J15-A nrPDB 29 3.0
4RYL-A nrPDB 28 4.1
6NF8-z nrPDB 27 7.8
2WZQ-A nrPDB 27 8.0
2JLW-A nrPDB 27 8.0
CONVERGED!
>1KCF-A nrPDB
Length = 258
Score = 546 bits (1408), Expect = e-156, Method: Composition-based stats.
Identities = 258/258 (100%), Positives = 258/258 (100%)
Query: 1 MATVKLSFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQN 60
MATVKLSFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQN
Sbjct: 1 MATVKLSFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQN 60
Query: 61 EDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQR 120
EDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQR
Sbjct: 61 EDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFNTLHEKFNPHVILMERQR 120
Query: 121 YRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLN 180
YRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLN
Sbjct: 121 YRSGIATIPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWASVLN 180
Query: 181 TKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGWMR 240
TKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGWMR
Sbjct: 181 TKASFSKKKSRVQMVKELIDGQKILFENEEALYKWNNGSRVEFKKDDMADSALIASGWMR 240
Query: 241 WQAQLKHYRNFCKQFLKQ 258
WQAQLKHYRNFCKQFLKQ
Sbjct: 241 WQAQLKHYRNFCKQFLKQ 258
>5E6F-A nrPDB
Length = 152
Score = 37.0 bits (84), Expect = 0.009, Method: Composition-based stats.
Identities = 27/87 (31%), Positives = 46/87 (52%), Gaps = 20/87 (22%)
Query: 42 VLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQL 101
+ +D+GIKN +Y + EDSKV + EK+ W+++++ + DL+
Sbjct: 4 ICSVDIGIKNPAYTIF-RYEDSKVSLI------AIEKS----DWSDNWEYNVTKDLT--- 49
Query: 102 FNTLHEKFNPHVILMERQRYRSGIATI 128
K+NP +I++E+Q YRS A I
Sbjct: 50 ------KYNPDIIVLEKQGYRSPNAKI 70
>5HMP-A nrPDB
Length = 750
Score = 32.4 bits (72), Expect = 0.21, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 7 SFLQHICKLTGLSRSGRKDELL--RRIVDSP---IYPTSRVLGID----LGIKNFSYCFA 57
S L+ C+L GL SGR + L R+IV S + P +R ++ L K +++ F
Sbjct: 349 SHLKVFCELLGL-ESGRVAQWLCNRKIVTSSETVVKPMTRPQAVNARDALAKKIYAHLFD 407
Query: 58 SQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILM 116
E + +S + T LDI E F +S I N L ++FN HV +
Sbjct: 408 FIVERINQALQ-FSGKQHTFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNMHVFKL 466
Query: 117 ERQRYRSGIATIPEWTL 133
E++ Y IP WTL
Sbjct: 467 EQEEYMK--EDIP-WTL 480
>4ZLK-A nrPDB
Length = 839
Score = 32.0 bits (71), Expect = 0.24, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 63/150 (42%), Gaps = 34/150 (22%)
Query: 81 LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRYRSGIATIPEWTLR----- 134
LDI E F+ +S I N L ++FN HV +E++ Y IP WTL
Sbjct: 484 LDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMK--EQIP-WTLIDFYDN 540
Query: 135 ---VNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKSTYSYWA-----SVLNTKASFS 186
+N++ES L L ++ + PK T WA + LN A F
Sbjct: 541 QPCINLIESKLGILDLLDEECKM-------------PKGTDDTWAQKLYNTHLNKCALFE 587
Query: 187 KKK--SRVQMVKELIDGQKILFENEEALYK 214
K + ++ ++K D K+ ++ E L K
Sbjct: 588 KPRMSNKAFIIKHFAD--KVEYQCEGFLEK 615
>2CWO-A nrPDB
Length = 197
Score = 31.6 bits (70), Expect = 0.36, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 7 SFLQHICKLTGLSRSGRKDELLRRIVDSPIYPTSRVLGIDLGIKNFSY 54
+FL+ C++TGL+R E +R++ ++ S +L ++ FSY
Sbjct: 128 AFLEEYCRITGLAREDALREKMRKVKSVVLFHHSELLKFEVTENMFSY 175
>5NGL-A nrPDB
Length = 494
Score = 30.0 bits (66), Expect = 0.98, Method: Composition-based stats.
Identities = 39/201 (19%), Positives = 81/201 (40%), Gaps = 32/201 (15%)
Query: 60 NEDSKVIIHNWS------VENLTEKNGLD-------------------IQWTEDFQPSSM 94
N KVI W+ V++LT++ LD ++W + F+ +
Sbjct: 167 NPSIKVIAAPWTCPKWMKVKSLTDRTPLDSWTNGQLNPDYYQDYATYFVKWIQAFKAEGI 226
Query: 95 ADLSIQLFNTLHEKFNPHVILMERQRYRSGIATIPEWTLRVNMLESMLYALHYAEKRNSI 154
++ N + N + ME + R + T ++ L + +YA + ++I
Sbjct: 227 DIYAVTPQNEPLNRGNSASLYMEWEEQRDFVKTALGPQMKAAGLSTKIYAFDHNYNYDNI 286
Query: 155 EQKIQYP-FLLSLSPKSTYSYWASVLNTKASFSKKKSRVQMVKELIDGQKILFENEEALY 213
E + YP + + S Y A+ N + + + + + +++LF E ++
Sbjct: 287 ESQKNYPGKIYEDAAASQYLAGAAYHN----YGGNREELLNIHQAYPEKELLF-TETSIG 341
Query: 214 KWNNGSRVEFK-KDDMADSAL 233
WN+G + + +DM + AL
Sbjct: 342 TWNSGRDLSKRLMEDMEEVAL 362
>1W7I-A nrPDB
Length = 795
Score = 29.7 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 81 LDIQWTEDFQPSSMADLSIQLFN-TLHEKFNPHVILMERQRYRSGIATIPEWTL 133
LDI E F+ +S I N L ++FN HV +E++ Y IP WTL
Sbjct: 436 LDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMK--EQIP-WTL 486
>4J15-A nrPDB
Length = 521
Score = 28.5 bits (62), Expect = 3.0, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 50 KNFSYCFASQNEDSKVIIHNWSVENLTEKNGLDIQWTEDFQ----PSSMADLSIQLFNTL 105
K FS + EDS H LTE GLDI+ ++ +AD +Q+F L
Sbjct: 284 KVFSIGPVFRAEDSNTHRH------LTEFVGLDIEMAFNYHYHEVMEEIADTMVQIFKGL 337
Query: 106 HEKFNPHVILMERQ 119
E+F + + +Q
Sbjct: 338 QERFQTEIQTVNKQ 351
>4RYL-A nrPDB
Length = 340
Score = 28.1 bits (61), Expect = 4.1, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 40/89 (44%), Gaps = 9/89 (10%)
Query: 128 IPEWTLRVNMLESMLYALHYAEKRNSIEQKIQYPFLLSLSPKST---------YSYWASV 178
I EW + ESML ++ YA+ + + YP + ++S + ++W V
Sbjct: 136 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVAVSDVNKHADRIAFWDDV 195
Query: 179 LNTKASFSKKKSRVQMVKELIDGQKILFE 207
K S KK + V E++D + ++ E
Sbjct: 196 YGFKMSCMKKAVIPEAVVEVLDPKTLISE 224
>6NF8-z nrPDB
Length = 247
Score = 27.0 bits (58), Expect = 7.8, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 50/117 (42%), Gaps = 16/117 (13%)
Query: 114 ILMERQRYRSGIATIPEW--TLRVNMLESMLYALHYAE-KRNSIEQKIQYPFLLSLSPKS 170
IL ERQR R P+ TLR ++ S H + K I+Q I+ L+ ++ K
Sbjct: 105 ILQERQRLREMEKANPKTGPTLRKELILSSNIGQHDLDTKTKQIQQWIKKKHLVQITIKK 164
Query: 171 TYSYWAS----------VLNTK---ASFSKKKSRVQMVKELIDGQKILFENEEALYK 214
+ S +L T A+FS + VQ K L+ + +NEE YK
Sbjct: 165 GKNVDVSENEMEEIFHQILQTMPGIATFSSRPQAVQGGKALMCVLRAFSKNEEKAYK 221
>2WZQ-A nrPDB
Length = 619
Score = 27.0 bits (58), Expect = 8.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 26 ELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLT---EKNGLD 82
EL+RR D P++ + +V + K+ +CF + +++++ N VE T EK L
Sbjct: 536 ELMRR-GDLPVWLSYKVASAGISYKDREWCFTGE-RNNQILEENMEVEIWTREGEKKKLR 593
Query: 83 IQWTE 87
+W +
Sbjct: 594 PKWLD 598
>2JLW-A nrPDB
Length = 451
Score = 27.0 bits (58), Expect = 8.0, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 26 ELLRRIVDSPIYPTSRVLGIDLGIKNFSYCFASQNEDSKVIIHNWSVENLT---EKNGLD 82
EL+RR D P++ + +V + K+ +CF + +++++ N VE T EK L
Sbjct: 368 ELMRR-GDLPVWLSYKVASAGISYKDREWCFTGE-RNNQILEENMEVEIWTREGEKKKLR 425
Query: 83 IQWTE 87
+W +
Sbjct: 426 PKWLD 430
Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
Posted date: Jan 3, 2023 9:05 PM
Number of letters in database: 10,336,785
Number of sequences in database: 36,641
Lambda K H
0.320 0.132 0.396
Lambda K H
0.267 0.0423 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,921,502
Number of Sequences: 36641
Number of extensions: 455485
Number of successful extensions: 1257
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1251
Number of HSP's gapped (non-prelim): 25
length of query: 258
length of database: 10,336,785
effective HSP length: 95
effective length of query: 163
effective length of database: 6,855,890
effective search space: 1117510070
effective search space used: 1117510070
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)