BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q08188 (693 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1L9N-A nrPDB 1420 0.0 3LY6-A nrPDB 497 e-141 1G0D-A nrPDB 444 e-125 5MHL-A nrPDB 413 e-115 2XZZ-A nrPDB 49 6e-06 6BH8-A nrPDB 33 0.37 1SOW-A nrPDB 32 0.92 2NRA-C nrPDB 30 4.6 5SVC-B nrPDB 28 9.0 >1L9N-A nrPDB Length = 692 Score = 1420 bits (3675), Expect = 0.0, Method: Compositional matrix adjust. Identities = 688/692 (99%), Positives = 690/692 (99%) Query: 2 AALGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTG 61 AALGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTG Sbjct: 1 AALGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTG 60 Query: 62 PYPSESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQG 121 PYPSESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQG Sbjct: 61 PYPSESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQG 120 Query: 122 GISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQF 181 GISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQF Sbjct: 121 GISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQF 180 Query: 182 EEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTY 241 EEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTY Sbjct: 181 EEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTY 240 Query: 242 TGGRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAH 301 TGGRDPRSW+GSVEILKNWKKSG SPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAH Sbjct: 241 TGGRDPRSWDGSVEILKNWKKSGLSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAH 300 Query: 302 DTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 361 DTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS Sbjct: 301 DTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 360 Query: 362 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 421 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR Sbjct: 361 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 420 Query: 422 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEP 481 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEP Sbjct: 421 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEP 480 Query: 482 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATM 541 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATM Sbjct: 481 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATM 540 Query: 542 SLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEV 601 SLDPEEEAEHPIKISYAQYE+YLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEV Sbjct: 541 SLDPEEEAEHPIKISYAQYERYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEV 600 Query: 602 LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSRVRFDI 661 LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKE SRVRFDI Sbjct: 601 LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDI 660 Query: 662 LPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE 693 LPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE Sbjct: 661 LPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE 692 >3LY6-A nrPDB Length = 697 Score = 497 bits (1280), Expect = e-141, Method: Compositional matrix adjust. Identities = 265/694 (38%), Positives = 391/694 (56%), Gaps = 24/694 (3%) Query: 4 LGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMN--KGLGSNERLEFIVSTG 61 L ++ + + N + HHT ++L++RRGQ F + + S + L F V TG Sbjct: 5 LVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTG 64 Query: 62 PYPSESAMTKAVFPLSNG-SSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQ 120 P PS+ A TKA FPL + G W+A + TL++ +++PA+APIG Y ++L+ + Sbjct: 65 PAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTG 124 Query: 121 GGISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQ 180 SS LG FILLFN W D+V++ + ER+EYV G I+ GS I I WNFGQ Sbjct: 125 YQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQ 184 Query: 181 FEEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGT 240 FE+ IL ICL +LD + F ++A D + R+ P YVGRV S M+N NDD GVL G W Sbjct: 185 FEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNN 244 Query: 241 YTGGRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSA 300 Y G P SW GSV+IL+ WK G V+YGQCWVFA T LR LGIP+RV+TN+NSA Sbjct: 245 YGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSA 304 Query: 301 HDTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQER 360 HD + NL ++ + + G S+ +WNFH W E W R DL P Y GWQ LD TPQE+ Sbjct: 305 HDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEK 364 Query: 361 SQGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIG 420 S+G + CGP V ++EGD+ +D PF+FAEVNAD + W+ + G K+ S +G Sbjct: 365 SEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQD-DGSVHKSINRSLIVG 423 Query: 421 RYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKA--LGKLKPNTPFAATSSMGLETEE 478 ISTK+VG + R D+T YKYPEGS +ER+ F +A L KL E+ Sbjct: 424 LKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRANHLNKL---------------AEK 468 Query: 479 QEPSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEV-WKD 537 +E + +++V + +G + ++ + N + + + + A T+ YNG L E K Sbjct: 469 EETGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKY 528 Query: 538 SATMSLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVP-DESEVVVERDIILDNPT 596 ++L+P E P+ I Y +Y L N+I++ A+ P S ++ ERD+ L+NP Sbjct: 529 LLNLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPE 588 Query: 597 LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPT-LGPKEGS 655 + + +L E + ++ + ++ NPL + C VEG+GL +++P + E Sbjct: 589 IKIRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEV 648 Query: 656 RVRFDILPSRSGTKQLLADFSCNKFPAIKAMLSI 689 +VR D+LP G +L+ +F +K A+K ++ Sbjct: 649 KVRMDLLPLHMGLHKLVVNFESDKLKAVKGFRNV 682 >1G0D-A nrPDB Length = 695 Score = 444 bits (1141), Expect = e-125, Method: Compositional matrix adjust. Identities = 242/692 (34%), Positives = 378/692 (54%), Gaps = 24/692 (3%) Query: 6 VQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTGPYPS 65 + +N ++ N AH T + + LI+RRGQ F + + + L LE ++ G Sbjct: 8 IVDVNGRSHENNLAHRTREIDRERLIVRRGQPFSITLQCSDSLPPKHHLELVLHLGK--R 65 Query: 66 ESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQGG--I 123 + + K +G+ W Q + L +++ SPA+A IG Y +A+ + S G + Sbjct: 66 DEVVIKV--QKEHGARDKWWFNQQGAQDEIL-LTLHSPANAVIGHYRLAVLVMSPDGHIV 122 Query: 124 SSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFEE 183 +F +LFNPW D V++ + ++ +EYV + G+I++G+ + I I WN+GQFE+ Sbjct: 123 ERADKISFHMLFNPWCRDDMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFED 182 Query: 184 DILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYTG 243 ++ IC +LD S +++ D+ R+DP YVGR ++AM+NSN D GVL G W YT Sbjct: 183 YVMDICFEVLDNSPAALKNSEMDIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTD 242 Query: 244 GRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHDT 303 G P W GSV IL+ W K+G PV+YGQCWVFA T LR LGIP+R ITNF SAHD Sbjct: 243 GVAPYRWTGSVPILQQWSKAGVRPVKYGQCWVFAAVACTVLRCLGIPTRPITNFASAHDV 302 Query: 304 DRNLSVDVYYDPMGNPLD--KGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 361 D NLSVD + LD + SDS WNFH W E W R DL GWQVLD TPQE S Sbjct: 303 DGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQELS 362 Query: 362 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 421 G F CGP V ++EG++ + +D PF+FAEVNAD I W+ G++ K + + ++G+ Sbjct: 363 DGEFCCGPCPVAAIKEGNLGVKYDAPFVFAEVNADTIYWIV-QKDGQRRKITEDHASVGK 421 Query: 422 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKL-KPNTPFAATSSMGLETEEQE 480 ISTK+V N R DVT YKYPEGS +ER+V++KA ++ +P+ A + L + + Sbjct: 422 NISTKSVYGNHREDVTLHYKYPEGSQKEREVYKKAGRRVTEPSNEIAEQGRLQLSIKHAQ 481 Query: 481 PSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSAT 540 P G + ++++ +KN + M A + YN E + + + Sbjct: 482 P------------VFGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTIS 529 Query: 541 MSLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDES-EVVVERDIILDNPTLTL 599 +++ + + +++ Y Y + + ++IR+ A+ P E+ ++ +I L P L + Sbjct: 530 VTVPAHKAHKEVMRLHYDDYVRCVSEHHLIRVKALLDAPGENGPIMTVANIPLSTPELLV 589 Query: 600 EVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSRVRF 659 +V +A V +P+ + F+NPL P++ V +EG+GLL + P V+ Sbjct: 590 QVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKL 649 Query: 660 DILPSRSGTKQLLADFSCNKFPAIKAMLSIDV 691 P R+G ++LL DF ++ +K + ++ V Sbjct: 650 SFSPMRTGVRKLLVDFDSDRLKDVKGVTTVVV 681 >5MHL-A nrPDB Length = 738 Score = 413 bits (1061), Expect = e-115, Method: Compositional matrix adjust. Identities = 242/695 (34%), Positives = 376/695 (54%), Gaps = 40/695 (5%) Query: 11 WQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNE---RLEFIVSTGPYPSES 67 W T N+ HHTDK+ + +LI+RRGQ+F V + ++ R+E+++ G YP E+ Sbjct: 64 WDT--NKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVI--GRYPQEN 119 Query: 68 AMTKAVFPL-SNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQGGI--- 123 T P+ S SG W A + ++ +SI S +G++ M + +++ G+ Sbjct: 120 KGTYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRT 179 Query: 124 -SSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFE 182 + + T+IL FNPW D+V++ N EREEYV D G+IF G N I W++GQFE Sbjct: 180 SRNPETDTYIL-FNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFE 238 Query: 183 EDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYT 242 + IL CL ++DR A D++ R +P V RV SAM+N+ DD GVL G+W Y Sbjct: 239 DGILDTCLYVMDR-------AQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYA 291 Query: 243 GGRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHD 302 G P +W GSV+IL ++ S +PVRYGQCWVFAG NT LR LGIP+R++TN+ SAHD Sbjct: 292 YGVPPSAWTGSVDILLEYRSSE-NPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHD 350 Query: 303 TDRNLSVDVYYDPMGNPLDK-GSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 361 D NL +D++ + GN K DSVWN+H WNE W R DL +GGWQ +D+TPQE S Sbjct: 351 NDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENS 410 Query: 362 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 421 G+++CGPASV ++ G V FD PF+FAEVN+D I ++ G +V++ IG+ Sbjct: 411 DGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLI-YITAKKDGTHVVENVDATHIGK 469 Query: 422 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKAL--GKLKP-NTPFAATSSMGLETE- 477 I TK +G + MD+TD YK+ EG ++ER + AL G KP NT S ++ + Sbjct: 470 LIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDF 529 Query: 478 EQEPSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKD 537 E E +++ GK+ L + +N S + T+T ++A Y G E K+ Sbjct: 530 EVENAVL-----------GKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKE 578 Query: 538 SATMSLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVV-ERDIILDNPT 596 + ++L+P + + I +Y L + ++ + +V+ ++ +L P Sbjct: 579 TFDVTLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPE 638 Query: 597 LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSR 656 + ++V V + V + F+NPL E +R+ + ++G G+ K+ + P + Sbjct: 639 IIIKVRGTQVVGSDMTVIVEFTNPLKETLRNVWVHLDGPGVTRPMKKM-FREIRPNSTVQ 697 Query: 657 VRFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDV 691 P SG ++L+A S + + L + + Sbjct: 698 WEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 732 >2XZZ-A nrPDB Length = 102 Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 1/96 (1%) Query: 597 LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSR 656 L+L +L A V + VQ++F NPL + + V +EGSGL + ++V +G E Sbjct: 8 LSLTLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRPKI-LNVGDIGGNETVT 66 Query: 657 VRFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDVA 692 +R +P R G +QL+A + + ++ +DVA Sbjct: 67 LRQSFVPVRPGPRQLIASLDSPQLSQVHGVIQVDVA 102 >6BH8-A nrPDB Length = 483 Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 6/55 (10%) Query: 184 DILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDN-GVLAGNW 237 ++LS CL++L R F+ DA + Y SA+I N DN G +W Sbjct: 401 EVLSFCLTVLSRRFEFQADAFAKKLGKAKDLY-----SALIKLNKDNLGFPVSDW 450 >1SOW-A nrPDB Length = 328 Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 39/80 (48%), Gaps = 4/80 (5%) Query: 559 QYEKYLKSDNMIRITAVCKVPDESEVVVER-DIILDNPTLTLEVLNEARVRKPVNVQMLF 617 QYEK SD +I + KVP +S+ R D++ N + EV + P+ ++ Sbjct: 70 QYEKIAGSDVVIITAGLTKVPGKSDKEWSRNDLLPFNAKIIREVAQGVKKYCPLAFVIVV 129 Query: 618 SNPLDEPVRDCVLMVEGSGL 637 +NPLD V+ E SGL Sbjct: 130 TNPLDCMVK---CFHEASGL 146 >2NRA-C nrPDB Length = 276 Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%) Query: 439 KYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEPSIIGKLK 488 +YKYP+ +R V KA+ ++K T S +G E+E I KLK Sbjct: 214 EYKYPDFPIFKRDVLNKAIAEIKKKTEI---SFVGFTVHEKEGRKISKLK 260 >5SVC-B nrPDB Length = 727 Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust. Identities = 41/173 (23%), Positives = 58/173 (33%), Gaps = 36/173 (20%) Query: 172 GMIGWNFGQFEEDILS------ICLSILDRSLNFRRDAATDVAS---------------R 210 G I W + I+S I L L ++ A +D+ + Sbjct: 279 GTISWKAKELARTIVSGPIGGVIGAKYLGEVLGYKNIACSDIGGTSFDVALITQGEMTIK 338 Query: 211 NDPKYVGRVLSAMINSNDDNGVLAGNWS--GTYTGGRDPRSWNGSVEILKNWKKSGFSPV 268 NDP VLS + + D G AG++ YT + + WK+SG V Sbjct: 339 NDPDMARLVLSLPLVAMDSVGAGAGSFIRLDPYTRAIKLGPDSAGYRVGVCWKESGIETV 398 Query: 269 RYGQCWVFAGTLNTALRSLGIPSRVITNF-NSAHDTDRNLSVDVYYDPMGNPL 320 C + G LN NF A DR SVD + +PL Sbjct: 399 TISDCHMVLGYLNP------------DNFLGGAVKLDRQRSVDAIKAQIADPL 439 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1L9N-A nrPDB 1139 0.0 3LY6-A nrPDB 1029 0.0 1G0D-A nrPDB 1010 0.0 5MHL-A nrPDB 949 0.0 2XZZ-A nrPDB 129 5e-30 Sequences not found previously or not previously below threshold: 2VW0-A nrPDB 33 0.59 4KNH-A nrPDB 32 0.95 1U3C-A nrPDB 32 1.2 4KCA-A nrPDB 31 1.6 3QFH-A nrPDB 30 2.3 1J39-A nrPDB 30 3.4 3B8P-A nrPDB 30 3.8 2O5R-A nrPDB 29 6.0 4PE5-B nrPDB 29 7.3 CONVERGED! >1L9N-A nrPDB Length = 692 Score = 1139 bits (2946), Expect = 0.0, Method: Composition-based stats. Identities = 688/692 (99%), Positives = 690/692 (99%) Query: 2 AALGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTG 61 AALGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTG Sbjct: 1 AALGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTG 60 Query: 62 PYPSESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQG 121 PYPSESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQG Sbjct: 61 PYPSESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQG 120 Query: 122 GISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQF 181 GISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQF Sbjct: 121 GISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQF 180 Query: 182 EEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTY 241 EEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTY Sbjct: 181 EEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTY 240 Query: 242 TGGRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAH 301 TGGRDPRSW+GSVEILKNWKKSG SPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAH Sbjct: 241 TGGRDPRSWDGSVEILKNWKKSGLSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAH 300 Query: 302 DTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 361 DTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS Sbjct: 301 DTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 360 Query: 362 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 421 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR Sbjct: 361 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 420 Query: 422 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEP 481 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEP Sbjct: 421 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEP 480 Query: 482 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATM 541 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATM Sbjct: 481 SIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATM 540 Query: 542 SLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEV 601 SLDPEEEAEHPIKISYAQYE+YLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEV Sbjct: 541 SLDPEEEAEHPIKISYAQYERYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEV 600 Query: 602 LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSRVRFDI 661 LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKE SRVRFDI Sbjct: 601 LNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKERSRVRFDI 660 Query: 662 LPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE 693 LPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE Sbjct: 661 LPSRSGTKQLLADFSCNKFPAIKAMLSIDVAE 692 >3LY6-A nrPDB Length = 697 Score = 1029 bits (2660), Expect = 0.0, Method: Composition-based stats. Identities = 262/695 (37%), Positives = 391/695 (56%), Gaps = 20/695 (2%) Query: 4 LGVQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMN--KGLGSNERLEFIVSTG 61 L ++ + + N + HHT ++L++RRGQ F + + S + L F V TG Sbjct: 5 LVLERCDLELETNGRDHHTADLCREKLVVRRGQPFWLTLHFEGRNYEASVDSLTFSVVTG 64 Query: 62 PYPSESAMTKAVFPLSNG-SSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQ 120 P PS+ A TKA FPL + G W+A + TL++ +++PA+APIG Y ++L+ + Sbjct: 65 PAPSQEAGTKARFPLRDAVEEGDWTATVVDQQDCTLSLQLTTPANAPIGLYRLSLEASTG 124 Query: 121 GGISSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQ 180 SS LG FILLFN W D+V++ + ER+EYV G I+ GS I I WNFGQ Sbjct: 125 YQGSSFVLGHFILLFNAWCPADAVYLDSEEERQEYVLTQQGFIYQGSAKFIKNIPWNFGQ 184 Query: 181 FEEDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGT 240 FE+ IL ICL +LD + F ++A D + R+ P YVGRV S M+N NDD GVL G W Sbjct: 185 FEDGILDICLILLDVNPKFLKNAGRDCSRRSSPVYVGRVGSGMVNCNDDQGVLLGRWDNN 244 Query: 241 YTGGRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSA 300 Y G P SW GSV+IL+ WK G V+YGQCWVFA T LR LGIP+RV+TN+NSA Sbjct: 245 YGDGVSPMSWIGSVDILRRWKNHGCQRVKYGQCWVFAAVACTVLRCLGIPTRVVTNYNSA 304 Query: 301 HDTDRNLSVDVYYDPMGNPLDKGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQER 360 HD + NL ++ + + G S+ +WNFH W E W R DL P Y GWQ LD TPQE+ Sbjct: 305 HDQNSNLLIEYFRNEFGEIQGDKSEMIWNFHCWVESWMTRPDLQPGYEGWQALDPTPQEK 364 Query: 361 SQGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIG 420 S+G + CGP V ++EGD+ +D PF+FAEVNAD + W+ + G K+ S +G Sbjct: 365 SEGTYCCGPVPVRAIKEGDLSTKYDAPFVFAEVNADVVDWIQQD-DGSVHKSINRSLIVG 423 Query: 421 RYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQE 480 ISTK+VG + R D+T YKYPEGS +ER+ F +A + + E++E Sbjct: 424 LKISTKSVGRDEREDITHTYKYPEGSSEEREAFTRA-------------NHLNKLAEKEE 470 Query: 481 PSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEV-WKDSA 539 + +++V + +G + ++ + N + + + + A T+ YNG L E K Sbjct: 471 TGMAMRIRVGQSMNMGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLL 530 Query: 540 TMSLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVP-DESEVVVERDIILDNPTLT 598 ++L+P E P+ I Y +Y L N+I++ A+ P S ++ ERD+ L+NP + Sbjct: 531 NLNLEPFSEKSVPLCILYEKYRDCLTESNLIKVRALLVEPVINSYLLAERDLYLENPEIK 590 Query: 599 LEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPT-LGPKEGSRV 657 + +L E + ++ + ++ NPL + C VEG+GL +++P + E +V Sbjct: 591 IRILGEPKQKRKLVAEVSLQNPLPVALEGCTFTVEGAGLTEEQKTVEIPDPVEAGEEVKV 650 Query: 658 RFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDVA 692 R D+LP G +L+ +F +K A+K ++ + Sbjct: 651 RMDLLPLHMGLHKLVVNFESDKLKAVKGFRNVIIG 685 >1G0D-A nrPDB Length = 695 Score = 1010 bits (2611), Expect = 0.0, Method: Composition-based stats. Identities = 242/692 (34%), Positives = 378/692 (54%), Gaps = 24/692 (3%) Query: 6 VQSINWQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNERLEFIVSTGPYPS 65 + +N ++ N AH T + + LI+RRGQ F + + + L LE ++ G Sbjct: 8 IVDVNGRSHENNLAHRTREIDRERLIVRRGQPFSITLQCSDSLPPKHHLELVLHLGK--R 65 Query: 66 ESAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQGG--I 123 + + K +G+ W Q + L +++ SPA+A IG Y +A+ + S G + Sbjct: 66 DEVVIKV--QKEHGARDKWWFNQQGAQDEIL-LTLHSPANAVIGHYRLAVLVMSPDGHIV 122 Query: 124 SSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFEE 183 +F +LFNPW D V++ + ++ +EYV + G+I++G+ + I I WN+GQFE+ Sbjct: 123 ERADKISFHMLFNPWCRDDMVYLPDESKLQEYVMNEDGVIYMGTWDYIRSIPWNYGQFED 182 Query: 184 DILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYTG 243 ++ IC +LD S +++ D+ R+DP YVGR ++AM+NSN D GVL G W YT Sbjct: 183 YVMDICFEVLDNSPAALKNSEMDIEHRSDPVYVGRTITAMVNSNGDRGVLTGRWEEPYTD 242 Query: 244 GRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHDT 303 G P W GSV IL+ W K+G PV+YGQCWVFA T LR LGIP+R ITNF SAHD Sbjct: 243 GVAPYRWTGSVPILQQWSKAGVRPVKYGQCWVFAAVACTVLRCLGIPTRPITNFASAHDV 302 Query: 304 DRNLSVDVYYDPMGNPLD--KGSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 361 D NLSVD + LD + SDS WNFH W E W R DL GWQVLD TPQE S Sbjct: 303 DGNLSVDFLLNERLESLDSRQRSDSSWNFHCWVESWMSREDLPEGNDGWQVLDPTPQELS 362 Query: 362 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 421 G F CGP V ++EG++ + +D PF+FAEVNAD I W+ G++ K + + ++G+ Sbjct: 363 DGEFCCGPCPVAAIKEGNLGVKYDAPFVFAEVNADTIYWIV-QKDGQRRKITEDHASVGK 421 Query: 422 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALGKL-KPNTPFAATSSMGLETEEQE 480 ISTK+V N R DVT YKYPEGS +ER+V++KA ++ +P+ A + L + + Sbjct: 422 NISTKSVYGNHREDVTLHYKYPEGSQKEREVYKKAGRRVTEPSNEIAEQGRLQLSIKHAQ 481 Query: 481 PSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSAT 540 P G + ++++ +KN + M A + YN E + + + Sbjct: 482 P------------VFGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTIS 529 Query: 541 MSLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDES-EVVVERDIILDNPTLTL 599 +++ + + +++ Y Y + + ++IR+ A+ P E+ ++ +I L P L + Sbjct: 530 VTVPAHKAHKEVMRLHYDDYVRCVSEHHLIRVKALLDAPGENGPIMTVANIPLSTPELLV 589 Query: 600 EVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSRVRF 659 +V +A V +P+ + F+NPL P++ V +EG+GLL + P V+ Sbjct: 590 QVPGKAVVWEPLTAYVSFTNPLPVPLKGGVFTLEGAGLLSATQIHVNGAVAPSGKVSVKL 649 Query: 660 DILPSRSGTKQLLADFSCNKFPAIKAMLSIDV 691 P R+G ++LL DF ++ +K + ++ V Sbjct: 650 SFSPMRTGVRKLLVDFDSDRLKDVKGVTTVVV 681 >5MHL-A nrPDB Length = 738 Score = 949 bits (2452), Expect = 0.0, Method: Composition-based stats. Identities = 242/695 (34%), Positives = 376/695 (54%), Gaps = 40/695 (5%) Query: 11 WQTAFNRQAHHTDKFSSQELILRRGQNFQVLMIMNKGLGSNE---RLEFIVSTGPYPSES 67 W T N+ HHTDK+ + +LI+RRGQ+F V + ++ R+E+++ G YP E+ Sbjct: 64 WDT--NKVDHHTDKYENNKLIVRRGQSFYVQIDFSRPYDPRRDLFRVEYVI--GRYPQEN 119 Query: 68 AMTKAVFPL-SNGSSGGWSAVLQASNGNTLTISISSPASAPIGRYTMALQIFSQGGI--- 123 T P+ S SG W A + ++ +SI S +G++ M + +++ G+ Sbjct: 120 KGTYIPVPIVSELQSGKWGAKIVMREDRSVRLSIQSSPKCIVGKFRMYVAVWTPYGVLRT 179 Query: 124 -SSVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFE 182 + + T+IL FNPW D+V++ N EREEYV D G+IF G N I W++GQFE Sbjct: 180 SRNPETDTYIL-FNPWCEDDAVYLDNEKEREEYVLNDIGVIFYGEVNDIKTRSWSYGQFE 238 Query: 183 EDILSICLSILDRSLNFRRDAATDVASRNDPKYVGRVLSAMINSNDDNGVLAGNWSGTYT 242 + IL CL ++DR A D++ R +P V RV SAM+N+ DD GVL G+W Y Sbjct: 239 DGILDTCLYVMDR-------AQMDLSGRGNPIKVSRVGSAMVNAKDDEGVLVGSWDNIYA 291 Query: 243 GGRDPRSWNGSVEILKNWKKSGFSPVRYGQCWVFAGTLNTALRSLGIPSRVITNFNSAHD 302 G P +W GSV+IL ++ S +PVRYGQCWVFAG NT LR LGIP+R++TN+ SAHD Sbjct: 292 YGVPPSAWTGSVDILLEYRSSE-NPVRYGQCWVFAGVFNTFLRCLGIPARIVTNYFSAHD 350 Query: 303 TDRNLSVDVYYDPMGNPLDK-GSDSVWNFHVWNEGWFVRSDLGPSYGGWQVLDATPQERS 361 D NL +D++ + GN K DSVWN+H WNE W R DL +GGWQ +D+TPQE S Sbjct: 351 NDANLQMDIFLEEDGNVNSKLTKDSVWNYHCWNEAWMTRPDLPVGFGGWQAVDSTPQENS 410 Query: 362 QGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGR 421 G+++CGPASV ++ G V FD PF+FAEVN+D I ++ G +V++ IG+ Sbjct: 411 DGMYRCGPASVQAIKHGHVCFQFDAPFVFAEVNSDLI-YITAKKDGTHVVENVDATHIGK 469 Query: 422 YISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKAL--GKLKP-NTPFAATSSMGLETE- 477 I TK +G + MD+TD YK+ EG ++ER + AL G KP NT S ++ + Sbjct: 470 LIVTKQIGGDGMMDITDTYKFQEGQEEERLALETALMYGAKKPLNTEGVMKSRSNVDMDF 529 Query: 478 EQEPSIIGKLKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKD 537 E E +++ GK+ L + +N S + T+T ++A Y G E K+ Sbjct: 530 EVENAVL-----------GKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKE 578 Query: 538 SATMSLDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVV-ERDIILDNPT 596 + ++L+P + + I +Y L + ++ + +V+ ++ +L P Sbjct: 579 TFDVTLEPLSFKKEAVLIQAGEYMGQLLEQASLHFFVTARINETRDVLAKQKSTVLTIPE 638 Query: 597 LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSR 656 + ++V V + V + F+NPL E +R+ + ++G G+ K+ + P + Sbjct: 639 IIIKVRGTQVVGSDMTVIVEFTNPLKETLRNVWVHLDGPGVTRPMKKM-FREIRPNSTVQ 697 Query: 657 VRFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDV 691 P SG ++L+A S + + L + + Sbjct: 698 WEEVCRPWVSGHRKLIASMSSDSLRHVYGELDVQI 732 >2XZZ-A nrPDB Length = 102 Score = 129 bits (323), Expect = 5e-30, Method: Composition-based stats. Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 1/96 (1%) Query: 597 LTLEVLNEARVRKPVNVQMLFSNPLDEPVRDCVLMVEGSGLLLGNLKIDVPTLGPKEGSR 656 L+L +L A V + VQ++F NPL + + V +EGSGL ++V +G E Sbjct: 8 LSLTLLGAAVVGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-KILNVGDIGGNETVT 66 Query: 657 VRFDILPSRSGTKQLLADFSCNKFPAIKAMLSIDVA 692 +R +P R G +QL+A + + ++ +DVA Sbjct: 67 LRQSFVPVRPGPRQLIASLDSPQLSQVHGVIQVDVA 102 >2VW0-A nrPDB Length = 697 Score = 32.8 bits (73), Expect = 0.59, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 8/78 (10%) Query: 339 VRSDLGPSYGGWQVLDATPQERSQGVFQCGPASVIGVREGDVQLNFDMPFIFAEVNADRI 398 + G S+ +++L E+ G + C P + ++ + IFA + + Sbjct: 463 TSQNRGESWEQFKLLPPFLGEKHNGTYLC-PGQGLALKSSN-------RLIFATYTSGEL 514 Query: 399 TWLYDNTTGKQWKNSVNS 416 T+L + +G+ WK S S Sbjct: 515 TYLISDDSGQTWKKSSAS 532 >4KNH-A nrPDB Length = 961 Score = 32.0 bits (71), Expect = 0.95, Method: Composition-based stats. Identities = 52/310 (16%), Positives = 98/310 (31%), Gaps = 72/310 (23%) Query: 325 DSVWNFHVWNEGWFVRS--DLGPSYGGWQVLD-----ATPQERSQGVFQCGPASVIGVRE 377 D++W W E W L S G Q + PQE + +F RE Sbjct: 668 DAMWR---WVEAWMTNPFSSLPGSQGAPQRISFLGQTPGPQECMEMMF----------RE 714 Query: 378 GDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGRYISTKAVGSNARMDVT 437 FI + ++T V + Sbjct: 715 FGTGFEQSNAFI-------------------------------QLLTTLLVPPEGLNSLN 743 Query: 438 DKYKYPE--GSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEPSIIGKLKVA----- 490 D +PE GS + LG ++P F + +PS + L+++ Sbjct: 744 DSVPFPEWLGSS------IRTLG-IEPYVDFVFDVFANRTKDISDPSQLRILRLSCLDFV 796 Query: 491 --GMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEE 548 ++ +++ ++ N+S D N+ + ++ + V E + ++ Sbjct: 797 MVCLVTFNEDLIVLGHESNISIDDAMAATNLATYVRLHPFSRVMEWLFNEKVITSLINTI 856 Query: 549 AEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEVLNEARVR 608 + PI + A + L + I + K + + E + L P + L EA VR Sbjct: 857 HQDPISLGSASPDSPLVVSILRAIQVMIKALE----LQETYLHLVRPEV-LRYQGEAGVR 911 Query: 609 KPVNVQMLFS 618 + +S Sbjct: 912 RKPVANAAYS 921 >1U3C-A nrPDB Length = 509 Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 26/144 (18%) Query: 67 SAMTKAVFPLSNGSSGGWSAVLQASNGNTLTISISSPASAPIGR--YTMALQIFSQGGIS 124 + VF L W+ + ++ + + S IG Y+ + Sbjct: 258 EVSVRKVFHLVRIKQVAWANEGNEAGEESVNLFLKS-----IGLREYSRYISFNHPYSHE 312 Query: 125 SVKLGTFILLFNPWLNVDSVFMGNHAEREEYVQEDAGI--IFVGST--NRIG-------- 172 LG L F PW ++ F R Y DAG+ ++ +RI Sbjct: 313 RPLLGH--LKFFPWAVDENYFKAWRQGRTGYPLVDAGMRELWATGWLHDRIRVVVSSFFV 370 Query: 173 ---MIGWNFGQ--FEEDILSICLS 191 + W +G F + +L L Sbjct: 371 KVLQLPWRWGMKYFWDTLLDADLE 394 >4KCA-A nrPDB Length = 692 Score = 31.3 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 55/184 (29%), Gaps = 14/184 (7%) Query: 367 CGPASVIGVREGDVQLNFDMPFIFAEVNADRITWLYDNTTGKQWKNSVNSHTIGRYISTK 426 CGP +I ++ + A++N D G K + I T Sbjct: 33 CGPCKMIAPILDEIADEYQGKLTVAKLNID-------QNPGTAPKYGIRG------IPTL 79 Query: 427 AVGSNARMDVTDKYKYPEGSDQERQVFQKALGKLKPNTPFAATSSMGLETEEQEPSIIGK 486 + N + T +G +E A P+T S+ + +PS Sbjct: 80 LLFKNGEVAATKVGALSKGQLKEFLDANLAGSGSGPSTYELKRVSVHDPSIVWDPSSKTY 139 Query: 487 LKVAGMLAVGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPE 546 A K +L + + KT T N A + + V +V K + Sbjct: 140 YIFGSHRAAAKTTDL-MSWTAFTAPWKTATSNNAANNVAFETPAVKKVKKGGVDVDFPAF 198 Query: 547 EEAE 550 + Sbjct: 199 SATK 202 >3QFH-A nrPDB Length = 447 Score = 30.5 bits (67), Expect = 2.3, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 31/72 (43%), Gaps = 2/72 (2%) Query: 411 KNSVNSHTIGRYISTKAVGSNARMDVTDKYKYPEGSDQERQVFQKALG--KLKPNTPFAA 468 K V + G + +VGS +D D + + E QKA+ K K + AA Sbjct: 218 KAIVQAANDGNQVINISVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAA 277 Query: 469 TSSMGLETEEQE 480 + G++ +++ Sbjct: 278 AGNDGIDVNDKQ 289 >1J39-A nrPDB Length = 351 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 10/42 (23%), Positives = 18/42 (42%) Query: 145 FMGNHAEREEYVQEDAGIIFVGSTNRIGMIGWNFGQFEEDIL 186 FM + + Y+ D + F S + W + EE++L Sbjct: 86 FMAKYKSKIYYLFTDIRLPFSQSWPNVKNRPWAYLYTEEELL 127 >3B8P-A nrPDB Length = 243 Score = 30.1 bits (66), Expect = 3.8, Method: Composition-based stats. Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 6/74 (8%) Query: 90 ASNGNTLTISISSPASAPIGRYTMALQIFSQGGISSVKL----GTFILLFNPWLNVDSVF 145 S T T I+ P +A + YT AL + G ++ K+ FI F+ + S Sbjct: 1 GSEKWTSTAIITQPDAAQVATYTNALNVL--YGGNAPKISEVQANFISRFSSAFSALSEV 58 Query: 146 MGNHAEREEYVQED 159 + N ERE+ E Sbjct: 59 LDNQKEREKLTIEQ 72 >2O5R-A nrPDB Length = 481 Score = 29.3 bits (64), Expect = 6.0, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 24/57 (42%) Query: 548 EAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEVLNE 604 + IKI +Y K + R+ + + P+ES E ++ P EV ++ Sbjct: 353 FEKAGIKIIDEEYFKKVLEITKERVEVLSEFPEESRFFFEDPAPVEIPEEMKEVFSQ 409 >4PE5-B nrPDB Length = 820 Score = 28.9 bits (63), Expect = 7.3, Method: Composition-based stats. Identities = 14/69 (20%), Positives = 26/69 (37%) Query: 543 LDPEEEAEHPIKISYAQYEKYLKSDNMIRITAVCKVPDESEVVVERDIILDNPTLTLEVL 602 L P Y +EK + NM+ + + ++ D +P L + +L Sbjct: 282 LSEHSFIPEPKSSCYNTHEKRIYQSNMLNRYLINVTFEGRDLSFSEDGYQMHPKLVIILL 341 Query: 603 NEARVRKPV 611 N+ R + V Sbjct: 342 NKERKWERV 350 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.128 0.355 Lambda K H 0.267 0.0395 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 25,458,617 Number of Sequences: 36641 Number of extensions: 1035718 Number of successful extensions: 2752 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 12 Number of HSP's successfully gapped in prelim test: 17 Number of HSP's that attempted gapping in prelim test: 2691 Number of HSP's gapped (non-prelim): 31 length of query: 693 length of database: 10,336,785 effective HSP length: 104 effective length of query: 589 effective length of database: 6,526,121 effective search space: 3843885269 effective search space used: 3843885269 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 62 (28.5 bits)