BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q08032 (650 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5U8S-E nrPDB 1326 0.0 5DGO-A nrPDB 148 9e-36 6CC2-A nrPDB 124 1e-28 5JXF-A nrPDB 30 3.1 >5U8S-E nrPDB Length = 650 Score = 1326 bits (3433), Expect = 0.0, Method: Compositional matrix adjust. Identities = 650/650 (100%), Positives = 650/650 (100%) Query: 1 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP 60 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP Sbjct: 1 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP 60 Query: 61 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDI 120 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDI Sbjct: 61 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDI 120 Query: 121 YVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDEND 180 YVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDEND Sbjct: 121 YVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDEND 180 Query: 181 NNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEY 240 NNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEY Sbjct: 181 NNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEY 240 Query: 241 YSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVK 300 YSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVK Sbjct: 241 YSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVK 300 Query: 301 RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLH 360 RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLH Sbjct: 301 RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLH 360 Query: 361 KMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSIS 420 KMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSIS Sbjct: 361 KMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSIS 420 Query: 421 ASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLS 480 ASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLS Sbjct: 421 ASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLS 480 Query: 481 WDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYR 540 WDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYR Sbjct: 481 WDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYR 540 Query: 541 NPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKP 600 NPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKP Sbjct: 541 NPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKP 600 Query: 601 ILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL 650 ILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL Sbjct: 601 ILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL 650 >5DGO-A nrPDB Length = 555 Score = 148 bits (373), Expect = 9e-36, Method: Compositional matrix adjust. Identities = 159/654 (24%), Positives = 289/654 (44%), Gaps = 120/654 (18%) Query: 5 ISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGY 64 +S F + + +++++ ++++FV+ ++DALCA K+L LF+ VQ +VP+ G+ Sbjct: 3 VSDFRKEFYEVVQSQ------RVLLFVAS-DVDALCACKILQALFQCDHVQYTLVPVSGW 55 Query: 65 SELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDIYVLD 124 EL + + + + +L+ G +DL L+ P E I +V D Sbjct: 56 QELETAFLEHKEQFHYFILINCGANVDLLDILQ--PDEDTI--------------FFVCD 99 Query: 125 AHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDENDNNGG 184 HRP N+ N++ I KLL DD+L Sbjct: 100 THRPVNVVNVYNDTQI--------------------KLLI----KQDDDL---------- 125 Query: 185 DDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVL---EEYY 241 E +++ ++EEDE+ + ++ G+ + +R+QR++ +L E+Y Sbjct: 126 --EVPAYEDIFRDEEEDEEHSGNDSDGSEPV--EQTMRRRQRREWEARRRDILFDYEQYE 181 Query: 242 SQGTTVVNSISAQIYSLLSAIGETNLSN-LWLNILGTTSL---DIAYAQVYNRLYPLLQD 297 GT+ SA + L+ + +L++ LW I+G T D Y +LQ Sbjct: 182 YHGTS-----SAMVMFELAWMLSKDLNDMLWWAIVGLTDQWVQDKITQMKYVTDVGVLQR 236 Query: 298 EVKRLTPSSRNSVKT--PDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENG 355 V R + + T D ++ + D L L +H SL+DS ++Y A+ LW+ +G Sbjct: 237 HVSRHNHRNEDEENTLSVDCTRISFEYDLRLVLYQHWSLHDSLCNTSYTAARFKLWSVHG 296 Query: 356 KKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGY 415 +KRL + A MG+PL ++ + MD S+K L + +++ +++G++D+ F G+ Sbjct: 297 QKRLQEFLADMGLPLKQVKQKFQAMDISLKENLREMIEESANKFGMKDMRVQTFSIHFGF 356 Query: 416 RGSISASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVS 475 + AS+ V A +L+E E+D S Sbjct: 357 KHKFLASDVVFATMSLME----------------------SPEKDGSG----------TD 384 Query: 476 NFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDG-P 534 +F + D+L ++ L G++LA+ RA T + L L+ + C L +G P Sbjct: 385 HFIQALDSLSRSNLDKLYHGLELAKKQLRATQQTIASCLCTNLVISQGPFLYCSLMEGTP 444 Query: 535 DLDLYRNP---LTLLRLGNWLIECCAESEDKQLLPMVLAS-IDENTDTYLVAGLTPRYPR 590 D+ L+ P L + C ++ +LLP+V+A+ + T V G+ P Sbjct: 445 DVMLFSRPASLSLLSKHLLKSFVCSTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPE--- 501 Query: 591 GLDTIHTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKL 644 D+ K N F AF++ T +++ ++F+ S+IE++ ED S FL+ L Sbjct: 502 -TDSSDRK----NFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDAL 550 >6CC2-A nrPDB Length = 543 Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 146/643 (22%), Positives = 257/643 (39%), Gaps = 116/643 (18%) Query: 6 SQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYS 65 + F E YN + + QL + +DA+ K+LS++F+K + VP+ Y Sbjct: 6 TSFEELYNGLRNRGKDKKTIQLYV---SPTVDAIVCYKILSMMFEKDGLLHSAVPVNNYE 62 Query: 66 ELRRHYSQL--DDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDIYVL 123 L R + + +++++ + G ID+ L E F +Y++ Sbjct: 63 TLSRVFKETIGHTDVHTVFFIDCAGSIDVSELL-------------GDIENIF---VYII 106 Query: 124 DAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQ-KEAYYKLLELDEESGDDELSGDENDNN 182 D+HRP+N N+ + I G + +Q E +L + D DD+L G + Sbjct: 107 DSHRPFNKLNVTNTNI------GLITSNEYQQFIEQETQLEKSDLLEVDDDLIGLNKSQS 160 Query: 183 GGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEYYS 242 + E ++ D D E E++ G ++ + + + GV ++Y S Sbjct: 161 FNNCEYIR--KMVDSDGEFYSESV----GRVALAIAKKLNKVENDMYWYAAIGVCDQYIS 214 Query: 243 QGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVKRL 302 I+A+ Y + AI + + NL L L T L LQ Sbjct: 215 L------KINAKTY--VHAI-QYFIDNLQLETLEITDL--------------LQ------ 245 Query: 303 TPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLHKM 362 +VKTP + ++ Q L LLRH +LYDS +++ + +KL +W GK++ + Sbjct: 246 ------TVKTPMCVKMDCQ----LMLLRHWTLYDSLFHTREIASKLGIWTSRGKEKFDVL 295 Query: 363 FARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISAS 422 A MGIPLS AQ+++ M +K + + + Y +++ F + G SISA Sbjct: 296 IADMGIPLSQAQQSYKTMSLEMKNKFLLKMEGYSKFYHFENLFLPSFFKKFGMDYSISAF 355 Query: 423 EFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLSWD 482 + A+ +++ ND+ D + W FW + Sbjct: 356 DAAHAIGSII----------------TNDEPD----------------QNWQQQFWEGFK 383 Query: 483 ALDDRKVELLNRGIQLAQDLQRAIFNTGVA-ILEKKLIKHLRIYRLCVLQDGPDLDLYRN 541 L E + G + + + TG+ +L YR C + D ++ Sbjct: 384 LLSSTTAEPYDFGFAKCIESNKNLVETGIILLLSGSCFNEANKYRFCSVSDELLSIRFKT 443 Query: 542 PLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKPI 601 P L+L +L E + K+ LP +LA +D T+++ G + P + T Sbjct: 444 PYKALQLAQFLAE-ASSRRYKKWLPFILAVLDAEKKTFVIVGYSS--PISVKT------- 493 Query: 602 LNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKL 644 LN F F Q + +F+S + EI RE+L + + L Sbjct: 494 LNYFGAKFTQTAQNMKISILQKSFDSFVTEIHRENLVKYKKAL 536 >5JXF-A nrPDB Length = 731 Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%) Query: 401 LQDIIRDGFVRTLGYRGSISASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEED 460 L + D F +GY G E++ + A+ ++ N T+ ++I DG +D Sbjct: 271 LDGVQEDDFTMVMGYPGK--TQEYLPSF-AVAQIVNETNPAKIEIREAALKVQDGFMRKD 327 Query: 461 NSAQKLTNLRKRWVSNFWLSW--DALDDRKVELLNRGIQLAQDLQRAIFNTG 510 N+ + + V+N+W W ++ +K + +D Q+ + G Sbjct: 328 NAIKIQYASKYAGVANYWKKWIGESQGLKKSNAIGLKQNFEKDFQQKVIAAG 379 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5U8S-E nrPDB 869 0.0 5DGO-A nrPDB 602 e-172 6CC2-A nrPDB 594 e-170 Sequences not found previously or not previously below threshold: 4V7D-BZ nrPDB 31 2.2 1W63-A nrPDB 29 8.7 CONVERGED! >5U8S-E nrPDB Length = 650 Score = 869 bits (2246), Expect = 0.0, Method: Composition-based stats. Identities = 650/650 (100%), Positives = 650/650 (100%) Query: 1 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP 60 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP Sbjct: 1 MYYGISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVP 60 Query: 61 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDI 120 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDI Sbjct: 61 IFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDI 120 Query: 121 YVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDEND 180 YVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDEND Sbjct: 121 YVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDEND 180 Query: 181 NNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEY 240 NNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEY Sbjct: 181 NNGGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEY 240 Query: 241 YSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVK 300 YSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVK Sbjct: 241 YSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVK 300 Query: 301 RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLH 360 RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLH Sbjct: 301 RLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLH 360 Query: 361 KMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSIS 420 KMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSIS Sbjct: 361 KMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSIS 420 Query: 421 ASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLS 480 ASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLS Sbjct: 421 ASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLS 480 Query: 481 WDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYR 540 WDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYR Sbjct: 481 WDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYR 540 Query: 541 NPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKP 600 NPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKP Sbjct: 541 NPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKP 600 Query: 601 ILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL 650 ILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL Sbjct: 601 ILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL 650 >5DGO-A nrPDB Length = 555 Score = 602 bits (1552), Expect = e-172, Method: Composition-based stats. Identities = 156/654 (23%), Positives = 287/654 (43%), Gaps = 120/654 (18%) Query: 5 ISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGY 64 +S F + + +++++ ++++FV+ ++DALCA K+L LF+ VQ +VP+ G+ Sbjct: 3 VSDFRKEFYEVVQSQ------RVLLFVAS-DVDALCACKILQALFQCDHVQYTLVPVSGW 55 Query: 65 SELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDIYVLD 124 EL + + + + +L+ G +DL L+ P E I +V D Sbjct: 56 QELETAFLEHKEQFHYFILINCGANVDLLDILQ--PDEDTI--------------FFVCD 99 Query: 125 AHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELDEESGDDELSGDENDNNGG 184 HRP N+ N++ I+ DD+L Sbjct: 100 THRPVNVVNVYNDTQIKL------------------------LIKQDDDL---------- 125 Query: 185 DDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVL---EEYY 241 E +++ ++EEDE+ + ++ G+ + +R+QR++ +L E+Y Sbjct: 126 --EVPAYEDIFRDEEEDEEHSGNDSDGSEPV--EQTMRRRQRREWEARRRDILFDYEQYE 181 Query: 242 SQGTTVVNSISAQIYSLLSAIGETNLSN-LWLNILGTTSL---DIAYAQVYNRLYPLLQD 297 GT+ SA + L+ + +L++ LW I+G T D Y +LQ Sbjct: 182 YHGTS-----SAMVMFELAWMLSKDLNDMLWWAIVGLTDQWVQDKITQMKYVTDVGVLQR 236 Query: 298 EVKRLTPSSRNSVKT--PDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENG 355 V R + + T D ++ + D L L +H SL+DS ++Y A+ LW+ +G Sbjct: 237 HVSRHNHRNEDEENTLSVDCTRISFEYDLRLVLYQHWSLHDSLCNTSYTAARFKLWSVHG 296 Query: 356 KKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGY 415 +KRL + A MG+PL ++ + MD S+K L + +++ +++G++D+ F G+ Sbjct: 297 QKRLQEFLADMGLPLKQVKQKFQAMDISLKENLREMIEESANKFGMKDMRVQTFSIHFGF 356 Query: 416 RGSISASEFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVS 475 + AS+ V A +L+E E+D S Sbjct: 357 KHKFLASDVVFATMSLME----------------------SPEKDGSG----------TD 384 Query: 476 NFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDG-P 534 +F + D+L ++ L G++LA+ RA T + L L+ + C L +G P Sbjct: 385 HFIQALDSLSRSNLDKLYHGLELAKKQLRATQQTIASCLCTNLVISQGPFLYCSLMEGTP 444 Query: 535 DLDLYRNP---LTLLRLGNWLIECCAESEDKQLLPMVLAS-IDENTDTYLVAGLTPRYPR 590 D+ L+ P L + C ++ +LLP+V+A+ + T V G+ P Sbjct: 445 DVMLFSRPASLSLLSKHLLKSFVCSTKNRRCKLLPLVMAAPLSMEHGTVTVVGIPPE--- 501 Query: 591 GLDTIHTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKL 644 D+ K N F AF++ T +++ ++F+ S+IE++ ED S FL+ L Sbjct: 502 -TDSSDRK----NFFGRAFEKAAESTSSRMLHNHFDLSVIELKAEDRSKFLDAL 550 >6CC2-A nrPDB Length = 543 Score = 594 bits (1530), Expect = e-170, Method: Composition-based stats. Identities = 146/643 (22%), Positives = 257/643 (39%), Gaps = 116/643 (18%) Query: 6 SQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYS 65 + F E YN + + QL + +DA+ K+LS++F+K + VP+ Y Sbjct: 6 TSFEELYNGLRNRGKDKKTIQLYV---SPTVDAIVCYKILSMMFEKDGLLHSAVPVNNYE 62 Query: 66 ELRRHYSQL--DDNINSLLLVGFGGVIDLEAFLEIDPQEYVIDTDEKSGEQSFRRDIYVL 123 L R + + +++++ + G ID+ L E F +Y++ Sbjct: 63 TLSRVFKETIGHTDVHTVFFIDCAGSIDVSELL-------------GDIENIF---VYII 106 Query: 124 DAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQ-KEAYYKLLELDEESGDDELSGDENDNN 182 D+HRP+N N+ + I G + +Q E +L + D DD+L G + Sbjct: 107 DSHRPFNKLNVTNTNI------GLITSNEYQQFIEQETQLEKSDLLEVDDDLIGLNKSQS 160 Query: 183 GGDDEATDADEVTDEDEEDEDETISNKRGNSSIGPNDLSKRKQRKKQIHEYEGVLEEYYS 242 + E ++ D D E E++ G ++ + + + GV ++Y S Sbjct: 161 FNNCEYIR--KMVDSDGEFYSESV----GRVALAIAKKLNKVENDMYWYAAIGVCDQYIS 214 Query: 243 QGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVKRL 302 I+A+ Y + AI + + NL L L T L LQ Sbjct: 215 L------KINAKTY--VHAI-QYFIDNLQLETLEITDL--------------LQ------ 245 Query: 303 TPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLHKM 362 +VKTP + ++ Q L LLRH +LYDS +++ + +KL +W GK++ + Sbjct: 246 ------TVKTPMCVKMDCQ----LMLLRHWTLYDSLFHTREIASKLGIWTSRGKEKFDVL 295 Query: 363 FARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISAS 422 A MGIPLS AQ+++ M +K + + + Y +++ F + G SISA Sbjct: 296 IADMGIPLSQAQQSYKTMSLEMKNKFLLKMEGYSKFYHFENLFLPSFFKKFGMDYSISAF 355 Query: 423 EFVEALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLSWD 482 + A+ +++ ND+ D + W FW + Sbjct: 356 DAAHAIGSII----------------TNDEPD----------------QNWQQQFWEGFK 383 Query: 483 ALDDRKVELLNRGIQLAQDLQRAIFNTGVA-ILEKKLIKHLRIYRLCVLQDGPDLDLYRN 541 L E + G + + + TG+ +L YR C + D ++ Sbjct: 384 LLSSTTAEPYDFGFAKCIESNKNLVETGIILLLSGSCFNEANKYRFCSVSDELLSIRFKT 443 Query: 542 PLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGLDTIHTKKPI 601 P L+L +L E + K+ LP +LA +D T+++ G + P + T Sbjct: 444 PYKALQLAQFLAE-ASSRRYKKWLPFILAVLDAEKKTFVIVGYSS--PISVKT------- 493 Query: 602 LNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKL 644 LN F F Q + +F+S + EI RE+L + + L Sbjct: 494 LNYFGAKFTQTAQNMKISILQKSFDSFVTEIHRENLVKYKKAL 536 >4V7D-BZ nrPDB Length = 711 Score = 30.6 bits (67), Expect = 2.2, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 34/104 (32%), Gaps = 6/104 (5%) Query: 427 ALTALLEVGNSTDKDSVKINNDNNDDTDGEEEEDNSAQKLTNLRKRWVSNFWLSWDALDD 486 A+ A D +K N N+ D E ++ + L W N S + Sbjct: 171 AIGAEEHFTGVVDLVKMKAINWNDADQGVTFEYEDIPADMVELANEWHQNLIESAAEASE 230 Query: 487 RKVELLNRGIQLAQDL------QRAIFNTGVAILEKKLIKHLRI 524 +E G +L + QR + N + + K+ + Sbjct: 231 ELMEKYLGGEELTEAEIKGALRQRVLNNEIILVTCGSAFKNKGV 274 >1W63-A nrPDB Length = 618 Score = 28.7 bits (62), Expect = 8.7, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 33/98 (33%), Gaps = 4/98 (4%) Query: 224 KQRKKQIHEYEGVLEEYYSQGTTVVNSISAQIYSLLSAIG----ETNLSNLWLNILGTTS 279 + +L + + T N +A +Y + I E+ L L +NILG Sbjct: 263 RNDDDSSEAMNDILAQVATNTETSKNVGNAILYETVLTIMDIKSESGLRVLAINILGRFL 322 Query: 280 LDIAYAQVYNRLYPLLQDEVKRLTPSSRNSVKTPDTLT 317 L+ Y L LL+ R+ D L Sbjct: 323 LNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLK 360 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.317 0.116 0.281 Lambda K H 0.267 0.0353 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,388,249 Number of Sequences: 36641 Number of extensions: 775224 Number of successful extensions: 3497 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 40 Number of HSP's successfully gapped in prelim test: 53 Number of HSP's that attempted gapping in prelim test: 2904 Number of HSP's gapped (non-prelim): 379 length of query: 650 length of database: 10,336,785 effective HSP length: 103 effective length of query: 547 effective length of database: 6,562,762 effective search space: 3589830814 effective search space used: 3589830814 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 62 (28.7 bits)