BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q07915 (199 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6EM4-u nrPDB 402 e-113 4U56-N4 nrPDB 66 1e-11 4V4N-AV nrPDB 63 7e-11 6IP5-2Q nrPDB 62 1e-10 4V6W-CW nrPDB 61 4e-10 3CCU-U nrPDB 52 2e-07 4V8M-BY nrPDB 42 2e-04 5XY3-W nrPDB 42 3e-04 4V8P-BT nrPDB 40 5e-04 5UMD-0 nrPDB 38 0.003 2R7E-B nrPDB 28 3.0 5T6R-V nrPDB 27 4.1 5E9U-B nrPDB 27 4.3 5WVI-Z nrPDB 27 4.7 >6EM4-u nrPDB Length = 199 Score = 402 bits (1033), Expect = e-113, Method: Compositional matrix adjust. Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF 120 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF Sbjct: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF 120 Query: 121 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL 180 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL Sbjct: 121 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL 180 Query: 181 EKQKILLKNRRRNTKKIAF 199 EKQKILLKNRRRNTKKIAF Sbjct: 181 EKQKILLKNRRRNTKKIAF 199 >4U56-N4 nrPDB Length = 155 Score = 65.9 bits (159), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 28/57 (49%), Positives = 36/57 (63%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57 M++ F + YPG G +FVR D+K FRF SK FKQR+NPR++ WT FRK Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRK 57 >4V4N-AV nrPDB Length = 66 Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 35/53 (66%) Query: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKA 58 C +C P PG G M+VRND + FC KC + + RNPRKLKWTKA+++A Sbjct: 7 CSYCGKPFEPGTGKMYVRNDGRVLFFCSRKCERYYFMGRNPRKLKWTKAYQEA 59 >6IP5-2Q nrPDB Length = 157 Score = 62.4 bits (150), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 34/57 (59%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57 M++ C F YPGHG + R D K F+F +KC AF +RNPR++ WT +R+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRR 57 >4V6W-CW nrPDB Length = 155 Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 33/57 (57%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRK 57 M+I C F YPGHG V+ D K F F KC +++ +RNPRK+ WT +R+ Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRR 57 >3CCU-U nrPDB Length = 67 Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 23/60 (38%), Positives = 28/60 (46%) Query: 2 RIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGK 61 R +C +C + PG G MFV D FC SKC R R L+WT R AG+ Sbjct: 3 RTRECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGE 62 >4V8M-BY nrPDB Length = 125 Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVR----NDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFR 56 MR C F +PGHG +V + F R KC + +++NPR + WT+ +R Sbjct: 1 MRTIDCEFSHFAVHPGHGRRYVPFAFLSTKPVLTFARPKCFAMYMRKKNPRFIAWTRTYR 60 Query: 57 K 57 + Sbjct: 61 R 61 >5XY3-W nrPDB Length = 113 Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%) Query: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAV 65 C F + GHG + +R D F K + ++++RNPRK+ WT+ +R K +A Sbjct: 8 CGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKKSVA- 66 Query: 66 DSTLT 70 D+ T Sbjct: 67 DTAAT 71 >4V8P-BT nrPDB Length = 158 Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 9/98 (9%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 +R C FC YPG G F+ D + F F K ++ +K+ WT A R+ Sbjct: 3 VRTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWK 62 Query: 61 KELAVDSTLTFAQ---RRNVPVRYNRELVATTLKAMAR 95 K A D AQ +RNV V R +V +L+ + R Sbjct: 63 KVKATD----IAQKKKKRNVTV--ARAIVGISLEEINR 94 >5UMD-0 nrPDB Length = 162 Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 9/98 (9%) Query: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAV 65 C F YPG G ++ D K + + SK Q++ KL+WT+ +R+ K+ + Sbjct: 13 CSFSEYRIYPGRGQKYIARDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRR-NNKKTKI 71 Query: 66 DSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKR 103 ++T QRR RY + + +E+IR ++ Sbjct: 72 ETT----QRR----RYKKTIKVQKAVCGLTVEDIRNRK 101 >2R7E-B nrPDB Length = 770 Score = 27.7 bits (60), Expect = 3.0, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 29/63 (46%) Query: 122 RDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQLE 181 R ++L NP +L+ + EI R + + + E ++ED +I ++E + Sbjct: 69 RTERLCSQNPPVLKRHQREITRTTLQSDQEEIDYDDTISVEMKKEDFDIYDEDENQSPRS 128 Query: 182 KQK 184 QK Sbjct: 129 FQK 131 >5T6R-V nrPDB Length = 917 Score = 27.3 bits (59), Expect = 4.1, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 143 RKLAKEQERAE------SVSEQEESEEEEEDMEIDSDE-EEEEQLEKQKILLKNRRRN 193 +++AKE + + S ++++E E E+D E+ E EE+ +L + L KNR N Sbjct: 814 KRMAKEHKDIDASLDYNSRAQKQEMERAEKDYELFLQELEEDAELRQSVNLYKNREAN 871 >5E9U-B nrPDB Length = 446 Score = 27.3 bits (59), Expect = 4.3, Method: Compositional matrix adjust. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 8/68 (11%) Query: 60 GKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGN--KE 117 G E VD L F Q VPV E+ +AR+ ++ ++R R Y ++ RG K+ Sbjct: 50 GDEEGVDHPLFFNQ---VPVPPFWEITGD--HQVARVSDMGEERARIHYASQARGRLVKQ 104 Query: 118 KDFLRDKK 125 D+L DKK Sbjct: 105 VDWL-DKK 111 >5WVI-Z nrPDB Length = 993 Score = 27.3 bits (59), Expect = 4.7, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 20/29 (68%) Query: 150 ERAESVSEQEESEEEEEDMEIDSDEEEEE 178 E+ ++ EE+E E ++ME+D++ EE E Sbjct: 654 EQVNEPTKNEEAEIEVDEMEVDAEGEEVE 682 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6EM4-u nrPDB 262 6e-71 4V8P-BT nrPDB 99 1e-21 6IP5-2Q nrPDB 91 4e-19 4V6W-CW nrPDB 89 9e-19 4V4N-AV nrPDB 89 9e-19 5XY3-W nrPDB 88 3e-18 3CCU-U nrPDB 86 9e-18 4V8M-BY nrPDB 82 2e-16 4U56-N4 nrPDB 80 5e-16 Sequences not found previously or not previously below threshold: 5UMD-0 nrPDB 67 6e-12 2Z2R-A nrPDB 33 0.067 2AYU-A nrPDB 33 0.080 5HZR-A nrPDB 32 0.19 5WLC-SS nrPDB 31 0.30 3LVH-D nrPDB 31 0.39 2R7E-B nrPDB 30 0.72 6AHD-u nrPDB 30 0.73 6N8N-V nrPDB 30 0.78 5T6R-V nrPDB 30 0.78 5E9U-B nrPDB 30 0.79 4XA1-A nrPDB 29 1.1 2I1J-A nrPDB 29 1.2 6MAT-A nrPDB 29 1.4 5V8F-A nrPDB 29 1.4 3N5M-A nrPDB 29 1.5 4FF5-A nrPDB 29 1.6 6CHS-H nrPDB 28 2.2 5WVI-Z nrPDB 28 2.3 5A5T-C nrPDB 28 3.1 1OXZ-A nrPDB 28 3.6 4BNE-A nrPDB 27 4.1 3Q5R-A nrPDB 27 5.4 4H03-A nrPDB 27 6.8 6AH0-2 nrPDB 27 7.7 5N9J-W nrPDB 27 7.9 3LLL-A nrPDB 26 8.2 >6EM4-u nrPDB Length = 199 Score = 262 bits (670), Expect = 6e-71, Method: Composition-based stats. Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF 120 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF Sbjct: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF 120 Query: 121 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL 180 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL Sbjct: 121 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL 180 Query: 181 EKQKILLKNRRRNTKKIAF 199 EKQKILLKNRRRNTKKIAF Sbjct: 181 EKQKILLKNRRRNTKKIAF 199 >4V8P-BT nrPDB Length = 158 Score = 99.1 bits (245), Expect = 1e-21, Method: Composition-based stats. Identities = 33/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 +R C FC YPG G F+ D + F F K ++ +K+ WT A R+ Sbjct: 3 VRTGTCSFCEYRIYPGRGQRFIAKDGRGFFFLTKKAKCLSLRKVKAQKITWTIARRRLWK 62 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEK 118 K A D ++RNV V R +V +L+ + R + + ++A + +R K+K Sbjct: 63 KVKATDIAQK-KKKRNVTV--ARAIVGISLEEINRRKNLDASHKKAEAEKAVRELKQK 117 >6IP5-2Q nrPDB Length = 157 Score = 90.6 bits (223), Expect = 4e-19, Method: Composition-based stats. Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 8/111 (7%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 M++ C F YPGHG + R D K F+F +KC AF +RNPR++ WT +R+ Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAM----ARIEEIRQ-KRERA 106 K + + +R V++ R + +L + + E+R+ +RE+A Sbjct: 61 KGQSEEIQKKRTRR---AVKFQRAITGASLADIMAKRNQKPEVRKAQREQA 108 >4V6W-CW nrPDB Length = 155 Score = 89.4 bits (220), Expect = 9e-19, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 58/118 (49%), Gaps = 3/118 (2%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 M+I C F YPGHG V+ D K F F KC +++ +RNPRK+ WT +R+ Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEK 118 K + +++ +R ++ R +V +L + ++ + +A ++ KE+ Sbjct: 61 KGIEEEASKKRTRR---TQKFQRAIVGASLAEILAKRNMKPEVRKAQRDQAIKVAKEQ 115 >4V4N-AV nrPDB Length = 66 Score = 89.4 bits (220), Expect = 9e-19, Method: Composition-based stats. Identities = 28/57 (49%), Positives = 36/57 (63%) Query: 2 RIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKA 58 R C +C P PG G M+VRND + FC KC + + RNPRKLKWTKA+++A Sbjct: 3 RWNVCSYCGKPFEPGTGKMYVRNDGRVLFFCSRKCERYYFMGRNPRKLKWTKAYQEA 59 >5XY3-W nrPDB Length = 113 Score = 87.5 bits (215), Expect = 3e-18, Method: Composition-based stats. Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 1/110 (0%) Query: 2 RIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGK 61 + C F + GHG + +R D F K + ++++RNPRK+ WT+ +R K Sbjct: 4 KTEICGFSGHIFHAGHGRVHIREDKHLMAFESRKAFRMWERKRNPRKIAWTEHYRHDHKK 63 Query: 62 ELA-VDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKN 110 +A +T AQR+ Y + M +I + R R+ KN Sbjct: 64 SVADTAATEKRAQRKKATRTYAGVAMEGNQHQMVQIVKKRVARKPVAKKN 113 >3CCU-U nrPDB Length = 67 Score = 86.0 bits (211), Expect = 9e-18, Method: Composition-based stats. Identities = 23/61 (37%), Positives = 28/61 (45%) Query: 2 RIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGK 61 R +C +C + PG G MFV D FC SKC R R L+WT R AG+ Sbjct: 3 RTRECDYCGTDIEPGTGTMFVHKDGATTHFCSSKCENNADLGREARNLEWTDTARGEAGE 62 Query: 62 E 62 Sbjct: 63 A 63 >4V8M-BY nrPDB Length = 125 Score = 81.7 bits (200), Expect = 2e-16, Method: Composition-based stats. Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 10/109 (9%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVR----NDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFR 56 MR C F +PGHG +V + F R KC + +++NPR + WT+ +R Sbjct: 1 MRTIDCEFSHFAVHPGHGRRYVPFAFLSTKPVLTFARPKCFAMYMRKKNPRFIAWTRTYR 60 Query: 57 KAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRER 105 + K + +R VR R +V ++ I+E+R K ++ Sbjct: 61 RIHRK---TTTDRVGRRRAARTVRAERAIVGA---ELSYIQEVRAKAKK 103 >4U56-N4 nrPDB Length = 155 Score = 80.2 bits (196), Expect = 5e-16, Method: Composition-based stats. Identities = 33/106 (31%), Positives = 54/106 (50%), Gaps = 3/106 (2%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 M++ F + YPG G +FVR D+K FRF SK FKQR+NPR++ WT FRK Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERA 106 K + + +++ V+ R + +L + ++ + +A Sbjct: 61 KGITEEVAKKRSRK---TVKAQRPITGASLDLIKERRSLKPEVRKA 103 >5UMD-0 nrPDB Length = 162 Score = 66.7 bits (161), Expect = 6e-12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 47/111 (42%), Gaps = 7/111 (6%) Query: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60 ++ C F YPG G ++ D K + + SK Q++ KL+WT+ +R+ Sbjct: 8 VKTEACSFSEYRIYPGRGQKYIARDGKVYFYLSSKFASLALQKKKAAKLRWTQTWRRNNK 67 Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAM----ARIEEIRQKRERAF 107 K + +R ++ + + T++ + A ++ I K + F Sbjct: 68 KTKIETTQR---RRYKKTIKVQKAVCGLTVEDIRNRKAYVQSIEAKNKAKF 115 >2Z2R-A nrPDB Length = 292 Score = 33.2 bits (74), Expect = 0.067, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 117 EKDFLRDKKLV-ESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEE 175 E FL+ K + E ++ +E ++AK QE ES++E E +EEE + DS+EE Sbjct: 48 ENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEE 107 Query: 176 E 176 + Sbjct: 108 Q 108 >2AYU-A nrPDB Length = 417 Score = 33.2 bits (74), Expect = 0.080, Method: Composition-based stats. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%) Query: 117 EKDFLRDKKLV-ESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEE 175 E FL+ K + E ++ +E ++AK QE ES++E E +EEE + DS+EE Sbjct: 121 ENKFLQKYKPIWEQRSRIISGQEQPKPEQIAKGQEIVESLNETELLVDEEEKAQNDSEEE 180 Query: 176 E 176 + Sbjct: 181 Q 181 >5HZR-A nrPDB Length = 732 Score = 32.0 bits (71), Expect = 0.19, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 64/167 (38%), Gaps = 23/167 (13%) Query: 19 IMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAA---GKELAVDSTLTFAQRR 75 F + D+ F F S +A N + + A D Q+ Sbjct: 489 RQFNQPDSPYFMFLLST--RAGGLGLNLQTADTVIIYDSDWNPHQDLQAQDRAHRIGQKN 546 Query: 76 NVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDFLRDKKLVESNPELLR 135 V R R + + +++ + ERA +K M G + D K E++ + + Sbjct: 547 EV--RILRLISSASVEE--------KILERARFKLDMDGKVIQAGRFDNKSSETDRDAM- 595 Query: 136 IREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQLEK 182 R L + + AES EQEE +++E +M + +EEE +K Sbjct: 596 ------LRTLLETADMAES-GEQEEMDDDELNMILARNEEELAIFQK 635 >5WLC-SS nrPDB Length = 898 Score = 31.3 bits (69), Expect = 0.30, Method: Composition-based stats. Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 5/122 (4%) Query: 70 TFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDFLR-----DK 124 T+ + + + NREL A + +I + +ER K++ KD ++ D Sbjct: 403 TYRKIKKKELMKNRELAAVSSDEDNEDHDIARAKERMTLKHKTNSKWAKDMIKHGMTNDA 462 Query: 125 KLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQLEKQK 184 + E E+LR E A+ L + + E Q S+ E E+ E E + +L K Sbjct: 463 ETREEMEEMLRQGERLKAKMLDRNSDDEEDGRVQTLSDVENEEKENIDSEALKSKLGKTG 522 Query: 185 IL 186 ++ Sbjct: 523 VM 524 >3LVH-D nrPDB Length = 205 Score = 30.9 bits (68), Expect = 0.39, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%) Query: 131 PELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQLEKQKI 185 PE +R + E RK +E + A V EQE E+ ++D+E + ++ + EQ+EK KI Sbjct: 99 PESIR-KWREEQRKRLQELDAASKVMEQEWREKAKKDLE-EWNQRQSEQVEKNKI 151 >2R7E-B nrPDB Length = 770 Score = 30.1 bits (66), Expect = 0.72, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 49 LKWTKAF-----RKAAGKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKR 103 L W + ++ + F ++ + E + A+A I E + K Sbjct: 3 LAWDNHYGTQIPKEEWKSQEKSPEKTAFKKKDTILSLNACE----SNHAIAAINEGQNKP 58 Query: 104 ERAFYKNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEE 163 E + R ++L NP +L+ + EI R + + + E Sbjct: 59 EIEVTWAKQG--------RTERLCSQNPPVLKRHQREITRTTLQSDQEEIDYDDTISVEM 110 Query: 164 EEEDMEIDSDEEEEEQLEKQK 184 ++ED +I ++E + QK Sbjct: 111 KKEDFDIYDEDENQSPRSFQK 131 >6AHD-u nrPDB Length = 793 Score = 30.1 bits (66), Expect = 0.73, Method: Composition-based stats. Identities = 13/32 (40%), Positives = 21/32 (65%) Query: 148 EQERAESVSEQEESEEEEEDMEIDSDEEEEEQ 179 +QE+AE Q + + + +DM+ SD+EEE Q Sbjct: 335 KQEKAEEPPSQLDQDTQVQDMDEGSDDEEEGQ 366 >6N8N-V nrPDB Length = 518 Score = 29.7 bits (65), Expect = 0.78, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 143 RKLAKEQERAE------SVSEQEESEEEEEDMEIDSDE-EEEEQLEKQKILLKNRRRN 193 +++AKE + + S ++++E E E+D E+ E EE+ +L + L KNR N Sbjct: 415 KRMAKEHKDIDASLDYNSRAQKQEMERAEKDYELFLQELEEDAELRQSVNLYKNREAN 472 >5T6R-V nrPDB Length = 917 Score = 29.7 bits (65), Expect = 0.78, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 7/58 (12%) Query: 143 RKLAKEQERAE------SVSEQEESEEEEEDMEIDSDE-EEEEQLEKQKILLKNRRRN 193 +++AKE + + S ++++E E E+D E+ E EE+ +L + L KNR N Sbjct: 814 KRMAKEHKDIDASLDYNSRAQKQEMERAEKDYELFLQELEEDAELRQSVNLYKNREAN 871 >5E9U-B nrPDB Length = 446 Score = 29.7 bits (65), Expect = 0.79, Method: Composition-based stats. Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 8/68 (11%) Query: 60 GKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGN--KE 117 G E VD L F Q VPV E+ +AR+ ++ ++R R Y ++ RG K+ Sbjct: 50 GDEEGVDHPLFFNQ---VPVPPFWEITGD--HQVARVSDMGEERARIHYASQARGRLVKQ 104 Query: 118 KDFLRDKK 125 D+L DKK Sbjct: 105 VDWL-DKK 111 >4XA1-A nrPDB Length = 159 Score = 29.3 bits (64), Expect = 1.1, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 4/89 (4%) Query: 109 KNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDM 168 K++MR + E+ L+ E+ LR + + +L ++ + + V ++ E E+ E + Sbjct: 51 KSKMRRDLEEATLQH----EATAAALRKKHADSVAELGEQIDNLQRVKQKLEKEKSEFKL 106 Query: 169 EIDSDEEEEEQLEKQKILLKNRRRNTKKI 197 E+D EQ+EK++ + RN + I Sbjct: 107 ELDDVTSNMEQIEKERDFYFGKLRNIELI 135 >2I1J-A nrPDB Length = 575 Score = 29.3 bits (64), Expect = 1.2, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 80/187 (42%), Gaps = 32/187 (17%) Query: 22 VRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRRNVPVRY 81 VR + + C H+ + +RR P + + +A ++LA + Sbjct: 274 VRVNKRILALCMGN-HELYMRRRKPDTIDVQQMKAQAREEKLAKQA-------------- 318 Query: 82 NRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDFLRDKKLVESNPELLRIREVEI 141 RE + + A R E+ +Q+ Y++R+R +E+ L+E+ +LR+ E Sbjct: 319 QREKLQLEIAARERAEKKQQE-----YQDRLRQMQEEMERSQANLLEAQDMILRLEEQLR 373 Query: 142 ARKLAKEQ------------ERAESVSEQEESEEEEEDMEIDSDEEEEEQLEKQKILLKN 189 + AKE+ +R E E +E ++ + EI + +EE +++++ L + Sbjct: 374 QLQAAKEELEQRQNELQAMMQRLEETKNMEAAERQKLEDEIRAKQEEVSRIQQEVELKDS 433 Query: 190 RRRNTKK 196 R ++ Sbjct: 434 ETRRLQE 440 >6MAT-A nrPDB Length = 813 Score = 29.0 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%) Query: 109 KNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDM 168 +N R D++ D + SN L R ++ R L ER +V +++ EEE D Sbjct: 29 ENGKRPRLTVDYVYDT-IKRSNSSLARQKK----RMLEDSIERVLAVRKEQAKAEEETDS 83 Query: 169 EIDSDEEEEEQLEKQKILLKNRRRN 193 + D E +E + E+QK R N Sbjct: 84 D-DLIEAQERERERQKAAQAQRDAN 107 >5V8F-A nrPDB Length = 913 Score = 29.0 bits (63), Expect = 1.4, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 52/117 (44%), Gaps = 12/117 (10%) Query: 74 RRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDFLRDKKLVESNPEL 133 R+ VRY E + IE+++ Y ++ + +++L+D L E+ Sbjct: 168 ERDFTVRYICEPTGEKFVDIN-IEDVKA------YIKKVEPREAQEYLKDLTLPSKKKEI 220 Query: 134 LR----IREVEIARKLAKEQERAESVSEQEE-SEEEEEDMEIDSDEEEEEQLEKQKI 185 R + +++ + RA +++ E+ +E+E D E SD + E ++ +I Sbjct: 221 KRGPQKKDKATQTAQISDAETRATDITDNEDGNEDESSDYESPSDIDVSEDMDSGEI 277 >3N5M-A nrPDB Length = 452 Score = 29.0 bits (63), Expect = 1.5, Method: Composition-based stats. Identities = 10/40 (25%), Positives = 18/40 (45%) Query: 36 CHKAFKQRRNPRKLKWTKAFRKAAGKELAVDSTLTFAQRR 75 + + Q+ P + K+ +R G +A + AQRR Sbjct: 127 ARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRR 166 >4FF5-A nrPDB Length = 266 Score = 29.0 bits (63), Expect = 1.6, Method: Composition-based stats. Identities = 12/40 (30%), Positives = 21/40 (52%) Query: 60 GKELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEI 99 G + A S +T Q+RNVPV + +++ M + E+ Sbjct: 99 GIDKAYKSHITELQKRNVPVAVYAYVAGKSVQEMEKAAEV 138 >6CHS-H nrPDB Length = 819 Score = 28.2 bits (61), Expect = 2.2, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%) Query: 142 ARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQLEKQKI--LLKNRRRNTKKI 197 A KLA ++ A + Q+ E ED+ ++ DE+ +L K+ +++ RR+ + Sbjct: 711 AVKLAIKESIAAEIERQKAREAAGEDVNMEDDEDPVPELTKRHFEEAMRDARRSVSDV 768 >5WVI-Z nrPDB Length = 993 Score = 28.2 bits (61), Expect = 2.3, Method: Composition-based stats. Identities = 11/29 (37%), Positives = 20/29 (68%) Query: 150 ERAESVSEQEESEEEEEDMEIDSDEEEEE 178 E+ ++ EE+E E ++ME+D++ EE E Sbjct: 654 EQVNEPTKNEEAEIEVDEMEVDAEGEEVE 682 >5A5T-C nrPDB Length = 843 Score = 27.8 bits (60), Expect = 3.1, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 156 SEQEESEEEEEDMEIDSDEEEEEQLEKQKILLKNR 190 S E++E+ EED E SDE+E+E LK + Sbjct: 96 SADEDAEKNEEDSEGSSDEDEDEDGVSAAAFLKKK 130 >1OXZ-A nrPDB Length = 186 Score = 27.8 bits (60), Expect = 3.6, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 31/56 (55%) Query: 109 KNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEE 164 KN + ++EK + + L S+PE LR I + ++Q+R E +S++ + EE Sbjct: 25 KNVIFEDEEKSKMLARLLKSSHPEDLRAANKLIKEMVQEDQKRMEKISKRVNAIEE 80 >4BNE-A nrPDB Length = 457 Score = 27.4 bits (59), Expect = 4.1, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 33/70 (47%) Query: 97 EEIRQKRERAFYKNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVS 156 E+I+ ++ AF+K M G KE D P +++EVE A+K + E ++ Sbjct: 119 EKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAYHAACKEEKLA 178 Query: 157 EQEESEEEEE 166 E+ + + Sbjct: 179 ISRETNSKAD 188 >3Q5R-A nrPDB Length = 284 Score = 27.0 bits (58), Expect = 5.4, Method: Composition-based stats. Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Query: 86 VATTLKAMARIEEIRQKRERAFYKNRMRGNKEK-DFL 121 + T L+ M + +++ + AFY + R +EK DFL Sbjct: 62 IGTPLEEMKKAQDLEMEELFAFYTEQERQIREKLDFL 98 >4H03-A nrPDB Length = 418 Score = 26.6 bits (57), Expect = 6.8, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 17/86 (19%) Query: 116 KEKDFLRDKK-----------LVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEE 164 + +DFL+DK+ VE N + L +E+ +K +E +S ++ + Sbjct: 10 RPEDFLKDKENAIQWEKKEAERVEKNLDTLEKEALELYKK------DSEQISNYSQTRQY 63 Query: 165 EEDMEIDSDEEEEEQLEKQKILLKNR 190 D +I+S+ E+E + + KN+ Sbjct: 64 FYDYQIESNPREKEYKNLRNAISKNK 89 >6AH0-2 nrPDB Length = 895 Score = 26.6 bits (57), Expect = 7.7, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 21/33 (63%) Query: 140 EIARKLAKEQERAESVSEQEESEEEEEDMEIDS 172 +I + L K + ES E+ S++EEE+ME D+ Sbjct: 268 KIPQALEKILQLKESRQEEMNSQQEEEEMETDA 300 >5N9J-W nrPDB Length = 545 Score = 26.6 bits (57), Expect = 7.9, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 7/78 (8%) Query: 110 NRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDME 169 N + N ++ F +K+++ ++E ++ ++L KE + ES ++ E+E E Sbjct: 28 NFLENNLQQIF---QKIIQERGPFRDLKEEDLQKELQKESIKDESSAKSSETENVLEFAT 84 Query: 170 IDS----DEEEEEQLEKQ 183 +DS ++ E E ++ Q Sbjct: 85 LDSKRNVNDTEVESMDSQ 102 >3LLL-A nrPDB Length = 287 Score = 26.3 bits (56), Expect = 8.2, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Query: 97 EEIRQKRERAFYKNRMRGNKEKDFLRDKKLVESNPELLRIREVEIARKLAKEQERAESVS 156 E+I+ ++ AF+K M G KE D P +++EVE A+K + E ++ Sbjct: 95 EKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKKAHHTACKEEKLA 154 Query: 157 -EQEESEEEEEDMEIDSDEEEEEQLEKQK 184 +E + + + + + ++ ++++EK K Sbjct: 155 ISREANSKADPSLNPEQLKKLQDKIEKCK 183 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.127 0.331 Lambda K H 0.267 0.0394 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 6,804,693 Number of Sequences: 36641 Number of extensions: 243281 Number of successful extensions: 3739 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 209 Number of HSP's successfully gapped in prelim test: 148 Number of HSP's that attempted gapping in prelim test: 1936 Number of HSP's gapped (non-prelim): 1148 length of query: 199 length of database: 10,336,785 effective HSP length: 92 effective length of query: 107 effective length of database: 6,965,813 effective search space: 745341991 effective search space used: 745341991 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 56 (26.2 bits)