BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q07896 (663 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6EM5-I nrPDB 1357 0.0 5WLC-SU nrPDB 36 0.053 5IKJ-A nrPDB 30 3.8 2KR6-A nrPDB 29 6.4 >6EM5-I nrPDB Length = 663 Score = 1357 bits (3513), Expect = 0.0, Method: Compositional matrix adjust. Identities = 663/663 (100%), Positives = 663/663 (100%) Query: 1 MAKRNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEM 60 MAKRNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEM Sbjct: 1 MAKRNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEM 60 Query: 61 VPRKNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQE 120 VPRKNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQE Sbjct: 61 VPRKNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQE 120 Query: 121 AEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLA 180 AEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLA Sbjct: 121 AEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLA 180 Query: 181 LVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN 240 LVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN Sbjct: 181 LVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN 240 Query: 241 AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFET 300 AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFET Sbjct: 241 AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFET 300 Query: 301 LLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPK 360 LLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPK Sbjct: 301 LLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPK 360 Query: 361 LKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKN 420 LKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKN Sbjct: 361 LKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKN 420 Query: 421 NAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVSAF 480 NAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVSAF Sbjct: 421 NAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVSAF 480 Query: 481 SLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVNVS 540 SLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVNVS Sbjct: 481 SLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVNVS 540 Query: 541 TKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPE 600 TKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPE Sbjct: 541 TKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPE 600 Query: 601 ISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKE 660 ISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKE Sbjct: 601 ISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKE 660 Query: 661 CSK 663 CSK Sbjct: 661 CSK 663 >5WLC-SU nrPDB Length = 552 Score = 36.2 bits (82), Expect = 0.053, Method: Compositional matrix adjust. Identities = 33/152 (21%), Positives = 64/152 (42%), Gaps = 22/152 (14%) Query: 531 EIIKPSV-NVSTKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILK 589 +II P + +V +A + +D VF S + +F K+L +P + ++ Sbjct: 343 QIINPDLMHVKYRARFF-RLMD-VFLSSTHLSAHLVASFIKKLARLTLESPPSAIVTVIP 400 Query: 590 FIDKLMNRYPE----------ISGLYSSEDRIGN---------GHFIMEADNPSRSNPEA 630 FI L+ ++P IS + + D++ N F + +P ++ Sbjct: 401 FIYNLIRKHPNCMIMLHNPAFISNPFQTPDQVANLKTLKENYVDPFDVHESDPELTHALD 460 Query: 631 ATLWDNALLEKHYCPVVTKGLRSLSSRSKECS 662 ++LW+ A L +HY P V + + K+ S Sbjct: 461 SSLWELASLMEHYHPNVATLAKIFAQPFKKLS 492 >5IKJ-A nrPDB Length = 548 Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 10/78 (12%) Query: 159 LGRLCKMVESKNPNTCKFSMLALVPVFKSIIPGYRIRPLTET-----EKKEKVSKEVSKL 213 L +LCK + + NPN S + P K+++ +RP ++ EK+ K S ++ Sbjct: 78 LNQLCKRLSTGNPNNTNASTVVTAPE-KNVVSARHVRPNPKSSKDTLEKQPKYSSQIYLT 136 Query: 214 RNFEQ----ALVYNYKNY 227 +FE +L NY+ Y Sbjct: 137 DSFENYYLASLPTNYQLY 154 >2KR6-A nrPDB Length = 176 Score = 29.3 bits (64), Expect = 6.4, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 8/92 (8%) Query: 71 NLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQEAEAKEDEPDT 130 N+ EG P + +R++ K + + E + + DD G +EE EA+ ++ Sbjct: 6 NMAEGDP-----EAQRRVSKNSKYNAESTERESQDTVAENDDGGFSEEWEAQ-RDSHLGP 59 Query: 131 EEKILQLKEDIADLVTKVM--EEPEENTAALG 160 + + + +L + ++ E+PEE LG Sbjct: 60 HRSTPESRAAVQELSSSILAGEDPEERGVKLG 91 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6EM5-I nrPDB 1352 0.0 Sequences not found previously or not previously below threshold: 5WLC-SU nrPDB 38 0.018 5IKJ-A nrPDB 34 0.25 6GMH-U nrPDB 32 0.60 2E87-A nrPDB 32 0.78 2KMW-A nrPDB 31 1.3 6MAT-A nrPDB 31 1.6 5FN4-B nrPDB 31 1.7 2KR6-A nrPDB 31 1.7 6FGZ-A nrPDB 30 3.4 6CV9-A nrPDB 30 3.4 6FAI-l nrPDB 30 3.7 4TYM-A nrPDB 30 4.0 4F9B-A nrPDB 30 4.2 1F9T-A nrPDB 30 4.4 4UQI-A nrPDB 30 4.5 4ETP-A nrPDB 30 4.8 5A5T-C nrPDB 29 5.0 3J3R-1 nrPDB 29 5.1 CONVERGED! >6EM5-I nrPDB Length = 663 Score = 1352 bits (3499), Expect = 0.0, Method: Composition-based stats. Identities = 663/663 (100%), Positives = 663/663 (100%) Query: 1 MAKRNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEM 60 MAKRNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEM Sbjct: 1 MAKRNRSQFRIQERTAKKRKHEDSLLEGNVFQNAPEDMDENTIYSAKGSSWDEEEQDYEM 60 Query: 61 VPRKNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQE 120 VPRKNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQE Sbjct: 61 VPRKNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQE 120 Query: 121 AEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLA 180 AEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLA Sbjct: 121 AEAKEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSMLA 180 Query: 181 LVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN 240 LVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN Sbjct: 181 LVPVFKSIIPGYRIRPLTETEKKEKVSKEVSKLRNFEQALVYNYKNYVGRLQSLSKTPSN 240 Query: 241 AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFET 300 AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFET Sbjct: 241 AAPIQVSLGILATQAAKELISTASHFNFRTDIFTLLLRRICKPRISTDPTSIQIIQTFET 300 Query: 301 LLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPK 360 LLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPK Sbjct: 301 LLNEDEEGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPK 360 Query: 361 LKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKN 420 LKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKN Sbjct: 361 LKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKN 420 Query: 421 NAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVSAF 480 NAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVSAF Sbjct: 421 NAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDNLSSAEVRKALLCIVSAF 480 Query: 481 SLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVNVS 540 SLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVNVS Sbjct: 481 SLISNTQYMKVNVDLSKFVDGLYALLPYICLDADIELSYRSLRLADPLNNEIIKPSVNVS 540 Query: 541 TKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPE 600 TKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPE Sbjct: 541 TKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILKFIDKLMNRYPE 600 Query: 601 ISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKE 660 ISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKE Sbjct: 601 ISGLYSSEDRIGNGHFIMEADNPSRSNPEAATLWDNALLEKHYCPVVTKGLRSLSSRSKE 660 Query: 661 CSK 663 CSK Sbjct: 661 CSK 663 >5WLC-SU nrPDB Length = 552 Score = 37.8 bits (86), Expect = 0.018, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 59/137 (43%), Gaps = 22/137 (16%) Query: 531 EIIKPSV-NVSTKAELLLKALDHVFFRSKSGTKERATAFTKRLYMCISHTPEKTSIAILK 589 +II P + +V +A + +D VF S + +F K+L +P + ++ Sbjct: 343 QIINPDLMHVKYRARFF-RLMD-VFLSSTHLSAHLVASFIKKLARLTLESPPSAIVTVIP 400 Query: 590 FIDKLMNRYPE----------ISGLYSSEDRIGN---------GHFIMEADNPSRSNPEA 630 FI L+ ++P IS + + D++ N F + +P ++ Sbjct: 401 FIYNLIRKHPNCMIMLHNPAFISNPFQTPDQVANLKTLKENYVDPFDVHESDPELTHALD 460 Query: 631 ATLWDNALLEKHYCPVV 647 ++LW+ A L +HY P V Sbjct: 461 SSLWELASLMEHYHPNV 477 >5IKJ-A nrPDB Length = 548 Score = 33.9 bits (76), Expect = 0.25, Method: Composition-based stats. Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 10/78 (12%) Query: 159 LGRLCKMVESKNPNTCKFSMLALVPVFKSIIPGYRIRPLTET-----EKKEKVSKEVSKL 213 L +LCK + + NPN S + P K+++ +RP ++ EK+ K S ++ Sbjct: 78 LNQLCKRLSTGNPNNTNASTVVTAPE-KNVVSARHVRPNPKSSKDTLEKQPKYSSQIYLT 136 Query: 214 RNFEQ----ALVYNYKNY 227 +FE +L NY+ Y Sbjct: 137 DSFENYYLASLPTNYQLY 154 >6GMH-U nrPDB Length = 776 Score = 32.4 bits (72), Expect = 0.60, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 16/118 (13%) Query: 31 FQNAPEDMD-ENTIYSAKGSSWDEEEQDYEMVPRKNRSDTSNLVEGLPIKVNGKVERKLH 89 QN+ +D +NT + D+E Q + N D P+ + E++ Sbjct: 286 LQNSDDDEKMQNTDDEERPQLSDDERQQLSEEEKANSDDER------PVASDNDDEKQNS 339 Query: 90 KAQEKPKDDDEE------DEDSNDSSEDDEGPNEEQEAEAKEDE---PDTEEKILQLK 138 +E+P+ DEE DE S E+ ++E+E + K + D+E+++L++K Sbjct: 340 DDEEQPQLSDEEKMQNSDDERPQASDEEHRHSDDEEEQDHKSESARGSDSEDEVLRMK 397 Score = 32.4 bits (72), Expect = 0.70, Method: Composition-based stats. Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 3/111 (2%) Query: 22 EDSLLEGNVFQNAPEDMDENTIYSAKGSSW-DEEEQDYEMVPRKNRSDTSNLVEGLPIKV 80 +DS EG + ++ E + ++ S D E+ D V + + S+ N E + Sbjct: 174 DDSEDEGASHHSGSDNHSERSDNRSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRS 233 Query: 81 NGKVERKLHKAQEKPKDDDEE--DEDSNDSSEDDEGPNEEQEAEAKEDEPD 129 +G + EK DDE+ ED +D S+D++ N + E A+ + D Sbjct: 234 DGGSHHSEAEGSEKAHSDDEKWGREDKSDQSDDEKIQNSDDEERAQGSDED 284 Score = 28.9 bits (63), Expect = 7.0, Method: Composition-based stats. Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 13/129 (10%) Query: 12 QERTAKKRKHED---SLLEGNVFQNAPEDMDENTIYSAKGSSWDEEE------QDYEMVP 62 + +++ HED S ++ + AP D ++ S GS E E D E Sbjct: 197 RSEASERSDHEDNDPSDVDQHSGSEAPNDDEDEGHRSDGGSHHSEAEGSEKAHSDDEKWG 256 Query: 63 RKNRSDTSN----LVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEE 118 R+++SD S+ + G E KL + + K + +DE+ S+D+ E Sbjct: 257 REDKSDQSDDEKIQNSDDEERAQGSDEDKLQNSDDDEKMQNTDDEERPQLSDDERQQLSE 316 Query: 119 QEAEAKEDE 127 +E +DE Sbjct: 317 EEKANSDDE 325 >2E87-A nrPDB Length = 357 Score = 32.0 bits (71), Expect = 0.78, Method: Composition-based stats. Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 8/76 (10%) Query: 144 LVTKVMEEPEENTAALGRLCKMVESKNPNTCKFSML---ALVPVFKSIIPGYRIRPLTET 200 ++ K+ EEN + RL K V+ K N K S L + V + II +RPL E Sbjct: 286 VINKIDVADEEN---IKRLEKFVKEKGLNPIKISALKGTGIDLVKEEIIK--TLRPLAEK 340 Query: 201 EKKEKVSKEVSKLRNF 216 +EK+ +E+ + R++ Sbjct: 341 VAREKIERELRRYRSY 356 >2KMW-A nrPDB Length = 150 Score = 31.2 bits (69), Expect = 1.3, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 14/60 (23%) Query: 87 KLHKAQEKP----KDD-----DEEDEDSNDSSEDDEGPNEEQEAEAKEDE-----PDTEE 132 +L K++EKP K D DE++E +++++ DDE Q++E+ +D+ PD E+ Sbjct: 87 RLLKSEEKPAPYIKVDWNKWCDEDEEVNSETASDDESAFVNQDSESSDDDGLLYLPDLEK 146 >6MAT-A nrPDB Length = 813 Score = 31.2 bits (69), Expect = 1.6, Method: Composition-based stats. Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 5/89 (5%) Query: 317 IFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKGNVSAPKLKKKDRVHLSKKQRKA 376 ++N +L +E+ L++D ++D T + N S + KK+ ++ Sbjct: 15 VYNIVLNLEQQGTDENGKRPRLTVDYVYD----TIKRSNSSLARQKKRMLEDSIERVLAV 70 Query: 377 RKEMQQIEEEMRNAEQAVSAEERERNQSE 405 RKE + EEE +++ + A+ERER + + Sbjct: 71 RKEQAKAEEET-DSDDLIEAQERERERQK 98 >5FN4-B nrPDB Length = 467 Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 8/92 (8%) Query: 71 NLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQEAEAKEDEPDT 130 N+ EG P + +R++ K + + E + + DD G +EE EA+ ++ Sbjct: 297 NMAEGDP-----EAQRRVSKNSKYNAESTERESQDTVAENDDGGFSEEWEAQ-RDSHLGP 350 Query: 131 EEKILQLKEDIADLVTKVM--EEPEENTAALG 160 + + + +L + ++ E+PEE LG Sbjct: 351 HRSTPESRAAVQELSSSILAGEDPEERGVKLG 382 >2KR6-A nrPDB Length = 176 Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats. Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 8/92 (8%) Query: 71 NLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQEAEAKEDEPDT 130 N+ EG P + +R++ K + + E + + DD G +EE EA+ ++ Sbjct: 6 NMAEGDP-----EAQRRVSKNSKYNAESTERESQDTVAENDDGGFSEEWEAQ-RDSHLGP 59 Query: 131 EEKILQLKEDIADLVTKVM--EEPEENTAALG 160 + + + +L + ++ E+PEE LG Sbjct: 60 HRSTPESRAAVQELSSSILAGEDPEERGVKLG 91 >6FGZ-A nrPDB Length = 774 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 10/93 (10%) Query: 29 NVFQNAPED--MDENTIYSAKGSSWDEEEQDYEMVPRKNRSDTSNLVEGLPIKVNGKVER 86 N +AP++ ++N I + + DE + + RK+ D S P K + Sbjct: 561 NAANSAPKESNANDNRILQPRRRNQDENAKKNDDARRKD--DKS------PNKTDASNAE 612 Query: 87 KLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQ 119 K ++ P+ D D N++ ED+E NE + Sbjct: 613 KDARSDRNPRGDPTMDNFFNEADEDEEDGNERR 645 Score = 29.3 bits (64), Expect = 5.2, Method: Composition-based stats. Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 4/64 (6%) Query: 64 KNRSDTSNLVEGLPIKVNGKVERKLHKAQEKPKDDDEEDEDSNDS-SEDDEGPNEEQEAE 122 K + T N P + N R L Q + ++ DE + ++D+ +DD+ PN+ + Sbjct: 554 KAANSTDNAANSAPKESNANDNRIL---QPRRRNQDENAKKNDDARRKDDKSPNKTDASN 610 Query: 123 AKED 126 A++D Sbjct: 611 AEKD 614 >6CV9-A nrPDB Length = 842 Score = 30.1 bits (66), Expect = 3.4, Method: Composition-based stats. Identities = 13/41 (31%), Positives = 25/41 (60%) Query: 124 KEDEPDTEEKILQLKEDIADLVTKVMEEPEENTAALGRLCK 164 KE + E ++ ++K+DI+ L +++EE +NT L L + Sbjct: 785 KESDEVNEGELKEIKQDISSLRYELLEEKSQNTEDLAELIR 825 >6FAI-l nrPDB Length = 425 Score = 30.1 bits (66), Expect = 3.7, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 2/54 (3%) Query: 97 DDDEEDEDSNDSSEDDEGPNEEQEAEAKEDEPDTEEKILQLKEDIADLVTKVME 150 D+ EE+ D SE+DE + E + E+ ED D+E+ + E I + ++ +E Sbjct: 361 DEAEEENGEGDYSEEDEYYDSELDNESSED--DSEDAQEEENERIIEALSSGVE 412 >4TYM-A nrPDB Length = 258 Score = 29.7 bits (65), Expect = 4.0, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 337 LLSLDVLHDYDPNTKL---KGNVSAPKLKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQA 393 +LS DV + P+ + K V A +++ +L+ + M I + + N E+ Sbjct: 175 VLSSDVFYSNQPDRNMALGKLGVHAIEMEAAALYYLAAQHNVNALAMMTISDNLNNPEED 234 Query: 394 VSAEERERNQSEILKI 409 SAEER+ ++++K+ Sbjct: 235 TSAEERQTTFTDMMKV 250 >4F9B-A nrPDB Length = 361 Score = 29.7 bits (65), Expect = 4.2, Method: Composition-based stats. Identities = 12/31 (38%), Positives = 19/31 (61%) Query: 586 AILKFIDKLMNRYPEISGLYSSEDRIGNGHF 616 + K I+KL P++S ++ ED+IG G F Sbjct: 4 GVKKDIEKLYEAVPQLSNVFKIEDKIGEGTF 34 >1F9T-A nrPDB Length = 358 Score = 29.7 bits (65), Expect = 4.4, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 34/193 (17%) Query: 289 PTSI-QIIQTFETLLNEDEEGSISFEILRIFNK----ILKTRNFNIEESVLNMLLSLDVL 343 P++I I L + + ++ E + I+N+ +L++ N N E++ + L ++ Sbjct: 122 PSTISHIFNWINKLKTKGWDYKVNCEFIEIYNENIVDLLRSDNNNKEDTSIG--LKHEIR 179 Query: 344 HDYDPNTKLKGNVSAPKLKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQ 403 HD + T NV++ KL+ ++ V + K KA K +R+ S E R+ Sbjct: 180 HDQETKTTTITNVTSCKLESEEMVEIILK--KANK--------LRSTASTASNEHSSRSH 229 Query: 404 SEILKIVFTIYLNILKNNAKTLIGSVLEGLTKFGNMANFDLLGDFLEVMKELISDTEFDN 463 S +F I+L+ +NAKT G +G + DL G + +++ D + Sbjct: 230 S-----IFIIHLS--GSNAKT-------GAHSYGTLNLVDLAGSERINVSQVVGDRLRE- 274 Query: 464 LSSAEVRKALLCI 476 + + K+L C+ Sbjct: 275 --TQNINKSLSCL 285 >4UQI-A nrPDB Length = 628 Score = 29.7 bits (65), Expect = 4.5, Method: Composition-based stats. Identities = 43/192 (22%), Positives = 81/192 (42%), Gaps = 17/192 (8%) Query: 248 LGILATQAAKELISTASHFNFRTDIFTLLLRRI-CKPRISTDPTSIQIIQTFETLLNEDE 306 L + T A+ +L +F + LLR + C P ++ + ET+LN+ + Sbjct: 233 LSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQ 292 Query: 307 EGSISFEILRIFNKILKTRNFNIEESVLNMLLSLDVLHDYDPNTKLKG-NVSAPKLKKKD 365 E K K ++ N + +VL +SL + HD +PN ++ N L+ ++ Sbjct: 293 EPP----------KSKKVQHSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRE 342 Query: 366 R----VHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILKIVFTIYLNILKNN 421 + L A E E + E ++A + ER+ S + V +Y ++N Sbjct: 343 TNLRYLALESMCTLASSEFSH-EAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSN 401 Query: 422 AKTLIGSVLEGL 433 A+ ++ +L L Sbjct: 402 AQQIVAEMLSYL 413 >4ETP-A nrPDB Length = 403 Score = 29.7 bits (65), Expect = 4.8, Method: Composition-based stats. Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 31/163 (19%) Query: 289 PTSI-QIIQTFETLLNEDEEGSISFEILRIFNK----ILKTRNFNIEESVLNMLLSLDVL 343 P++I I L + + ++ E + I+N+ +L++ N N E++ + L ++ Sbjct: 167 PSTISHIFNWINKLKTKGWDYKVNAEFIEIYNENIVDLLRSDNNNKEDTSIG--LKHEIR 224 Query: 344 HDYDPNTKLKGNVSAPKLKKKDRVHLSKKQRKARKEMQQIEEEMRNAEQAVSAEERERNQ 403 HD + T NV++ KL+ ++ V + K KA K +R+ S E R+ Sbjct: 225 HDQETKTTTITNVTSVKLESEEMVEIILK--KANK--------LRSTASTASNEHSSRSH 274 Query: 404 SEILKIVFTIYLNILKNNAKTLIGSVLEGLTKFGNMANFDLLG 446 S +F I+L+ +NAKT G +G + DL G Sbjct: 275 S-----IFIIHLS--GSNAKT-------GAHSYGTLNLVDLAG 303 >5A5T-C nrPDB Length = 843 Score = 29.3 bits (64), Expect = 5.0, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Query: 79 KVNGKVERKLHKAQEKPKDDDEEDEDSNDSSEDDEGPNEEQEAE 122 K N E + ++ P+ +ED + N+ ED EG ++E E E Sbjct: 77 KYNRDFESHITNYKQNPEQSADEDAEKNE--EDSEGSSDEDEDE 118 >3J3R-1 nrPDB Length = 218 Score = 29.3 bits (64), Expect = 5.1, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 24/38 (63%) Query: 371 KKQRKARKEMQQIEEEMRNAEQAVSAEERERNQSEILK 408 KKQ A +++ + ++ + EQAV+ EE+E+ +L+ Sbjct: 95 KKQEPASEDLDALLDDFQKEEQAVNQEEKEQKLQFVLR 132 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.130 0.355 Lambda K H 0.267 0.0405 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,991,944 Number of Sequences: 36641 Number of extensions: 968560 Number of successful extensions: 5091 Number of sequences better than 10.0: 92 Number of HSP's better than 10.0 without gapping: 108 Number of HSP's successfully gapped in prelim test: 107 Number of HSP's that attempted gapping in prelim test: 3470 Number of HSP's gapped (non-prelim): 875 length of query: 663 length of database: 10,336,785 effective HSP length: 103 effective length of query: 560 effective length of database: 6,562,762 effective search space: 3675146720 effective search space used: 3675146720 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 62 (28.5 bits)