BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q07794 (436 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2ZFN-A nrPDB 897 0.0 3CZ7-A nrPDB 726 0.0 5ZBB-A nrPDB 64 1e-10 6AK1-A nrPDB 30 1.9 4B8C-B nrPDB 28 9.3 >2ZFN-A nrPDB Length = 460 Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/436 (100%), Positives = 436/436 (100%) Query: 1 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 60 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK Sbjct: 25 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 84 Query: 61 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 120 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL Sbjct: 85 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 144 Query: 121 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT 180 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT Sbjct: 145 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT 204 Query: 181 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 240 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA Sbjct: 205 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 264 Query: 241 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 300 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE Sbjct: 265 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 324 Query: 301 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 360 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA Sbjct: 325 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 384 Query: 361 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKREHRERNQPVPASNINTLA 420 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKREHRERNQPVPASNINTLA Sbjct: 385 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKREHRERNQPVPASNINTLA 444 Query: 421 ITMLKPRKKAKALPKT 436 ITMLKPRKKAKALPKT Sbjct: 445 ITMLKPRKKAKALPKT 460 >3CZ7-A nrPDB Length = 364 Score = 726 bits (1874), Expect = 0.0, Method: Compositional matrix adjust. Identities = 362/403 (89%), Positives = 362/403 (89%), Gaps = 39/403 (9%) Query: 1 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 60 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK Sbjct: 1 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 60 Query: 61 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 120 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL Sbjct: 61 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 120 Query: 121 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT 180 QKVKPAI GS FQQDLYLSFT Sbjct: 121 QKVKPAI------------------------------GGSG---------FQQDLYLSFT 141 Query: 181 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 240 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA Sbjct: 142 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 201 Query: 241 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 300 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE Sbjct: 202 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 261 Query: 301 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 360 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA Sbjct: 262 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 321 Query: 361 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKRE 403 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKRE Sbjct: 322 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKRE 364 >5ZBB-A nrPDB Length = 544 Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust. Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 52/179 (29%) Query: 189 ICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIE----------CFQNDT 238 + LF R +QYLFP S +N +KH+L+ L+KWW ++D +L E + T Sbjct: 136 VSLFARAQNQYLFPGSIENPEKHVLDDRGLIKWWCRVIDPILREYEPETGSHEKAVDDQT 195 Query: 239 Q--------AKLRIPGEDPARVRSYL------------RGMK-YPLWQVGDIFTSKENSL 277 Q A L +PG D R + R + YPL Q+ D + L Sbjct: 196 QESAKSSATAFLIVPGCDKFETRGFFPITARSDGKDRPRWLNSYPLHQLCDNPNAPPRCL 255 Query: 278 AVYNIPLFPDDPKARFIHQLAEED----------------RLLKVSLSSFWIELQERQE 320 +P FPDDPK RF+ L +E R +K SL+ FW + RQE Sbjct: 256 ----VPRFPDDPKTRFLIDLDDELPESTGAAGSKENSGHWRSVK-SLAQFWEMMSFRQE 309 >6AK1-A nrPDB Length = 488 Score = 30.0 bits (66), Expect = 1.9, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 21/95 (22%) Query: 331 GISGYSLA---TPSLFPSSADVIVPKSRKQFRAIKKYITG----EEYDTEEGAIEA---F 380 G+ G++LA TP D IVP+ RK+ RA Y G + T +G +E+ Sbjct: 390 GVDGFNLAYAVTPGSVTDFIDYIVPELRKRGRAQDSYKPGSLRRKLIGTNDGRVESTHPA 449 Query: 381 TNIRDFLLLRMATNLQSLTGKREHRERNQPVPASN 415 RD + GK +R QP P +N Sbjct: 450 AQYRD-----------AYVGKESVADRTQPSPFAN 473 >4B8C-B nrPDB Length = 249 Score = 27.7 bits (60), Expect = 9.3, Method: Compositional matrix adjust. Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 7/60 (11%) Query: 294 IHQLAEEDRLLK------VSLSSFWIELQERQEFKLSVTSSV-MGISGYSLATPSLFPSS 346 I Q A E ++ K V + IEL E+ +KLS+T V + + ++L T SL PS+ Sbjct: 177 ILQRASESKIFKPPNPWTVGILKLLIELNEKANWKLSLTFEVEVLLKSFNLTTKSLKPSN 236 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2ZFN-A nrPDB 841 0.0 3CZ7-A nrPDB 701 0.0 5ZBB-A nrPDB 193 2e-49 Sequences not found previously or not previously below threshold: 6AK1-A nrPDB 33 0.22 1S9I-A nrPDB 31 1.0 3J9E-D nrPDB 30 2.5 4AN9-A nrPDB 29 3.2 5KUC-A nrPDB 29 3.6 5NGW-A nrPDB 29 5.6 5KKR-C nrPDB 29 6.3 3EQC-A nrPDB 29 6.3 CONVERGED! >2ZFN-A nrPDB Length = 460 Score = 841 bits (2172), Expect = 0.0, Method: Composition-based stats. Identities = 436/436 (100%), Positives = 436/436 (100%) Query: 1 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 60 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK Sbjct: 25 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 84 Query: 61 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 120 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL Sbjct: 85 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 144 Query: 121 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT 180 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT Sbjct: 145 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT 204 Query: 181 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 240 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA Sbjct: 205 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 264 Query: 241 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 300 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE Sbjct: 265 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 324 Query: 301 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 360 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA Sbjct: 325 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 384 Query: 361 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKREHRERNQPVPASNINTLA 420 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKREHRERNQPVPASNINTLA Sbjct: 385 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKREHRERNQPVPASNINTLA 444 Query: 421 ITMLKPRKKAKALPKT 436 ITMLKPRKKAKALPKT Sbjct: 445 ITMLKPRKKAKALPKT 460 >3CZ7-A nrPDB Length = 364 Score = 701 bits (1810), Expect = 0.0, Method: Composition-based stats. Identities = 362/403 (89%), Positives = 362/403 (89%), Gaps = 39/403 (9%) Query: 1 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 60 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK Sbjct: 1 MSLNDFLSSVLPVSEQFEYLSLQSIPLETHAVVTPNKDDKRVPKSTIKTQHFFSLFHQGK 60 Query: 61 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 120 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL Sbjct: 61 VFFSLEVYVYVTLWDEADAERLIFVSKADTNGYCNTRVSVRDITKIILEFILSIDPNYYL 120 Query: 121 QKVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFT 180 QKVKPAI GS FQQDLYLSFT Sbjct: 121 QKVKPAI------------------------------GGSG---------FQQDLYLSFT 141 Query: 181 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 240 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA Sbjct: 142 CPREILTKICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECFQNDTQA 201 Query: 241 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 300 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE Sbjct: 202 KLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKARFIHQLAEE 261 Query: 301 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 360 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA Sbjct: 262 DRLLKVSLSSFWIELQERQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRA 321 Query: 361 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKRE 403 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKRE Sbjct: 322 IKKYITGEEYDTEEGAIEAFTNIRDFLLLRMATNLQSLTGKRE 364 >5ZBB-A nrPDB Length = 544 Score = 193 bits (489), Expect = 2e-49, Method: Composition-based stats. Identities = 55/179 (30%), Positives = 77/179 (43%), Gaps = 52/179 (29%) Query: 189 ICLFTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIE----------CFQNDT 238 + LF R +QYLFP S +N +KH+L+ L+KWW ++D +L E + T Sbjct: 136 VSLFARAQNQYLFPGSIENPEKHVLDDRGLIKWWCRVIDPILREYEPETGSHEKAVDDQT 195 Query: 239 Q--------AKLRIPGEDPARVRSYL------------RGMK-YPLWQVGDIFTSKENSL 277 Q A L +PG D R + R + YPL Q+ D + L Sbjct: 196 QESAKSSATAFLIVPGCDKFETRGFFPITARSDGKDRPRWLNSYPLHQLCDNPNAPPRCL 255 Query: 278 AVYNIPLFPDDPKARFIHQLAEED----------------RLLKVSLSSFWIELQERQE 320 +P FPDDPK RF+ L +E R +K SL+ FW + RQE Sbjct: 256 ----VPRFPDDPKTRFLIDLDDELPESTGAAGSKENSGHWRSVK-SLAQFWEMMSFRQE 309 >6AK1-A nrPDB Length = 488 Score = 33.2 bits (74), Expect = 0.22, Method: Composition-based stats. Identities = 28/95 (29%), Positives = 40/95 (42%), Gaps = 21/95 (22%) Query: 331 GISGYSLA---TPSLFPSSADVIVPKSRKQFRAIKKYITG----EEYDTEEGAIEAF--- 380 G+ G++LA TP D IVP+ RK+ RA Y G + T +G +E+ Sbjct: 390 GVDGFNLAYAVTPGSVTDFIDYIVPELRKRGRAQDSYKPGSLRRKLIGTNDGRVESTHPA 449 Query: 381 TNIRDFLLLRMATNLQSLTGKREHRERNQPVPASN 415 RD + GK +R QP P +N Sbjct: 450 AQYRD-----------AYVGKESVADRTQPSPFAN 473 >1S9I-A nrPDB Length = 354 Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 68/179 (37%), Gaps = 21/179 (11%) Query: 122 KVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTC 181 ++KPAIR+ +++ ++P A S ++ ++ Q L + Sbjct: 52 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRI 111 Query: 182 PREILTKICL-------FTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECF 234 P EIL K+ + + R Q + D ++N +K F + LI+ Sbjct: 112 PEEILGKVSIAVLRGLAYLREKHQIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSM 169 Query: 235 QND---TQAKLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPK 290 N T++ + P R++ ++ +W +G LAV P+ P D K Sbjct: 170 ANSFVGTRSYMA-----PERLQGTHYSVQSDIWSMGLSLVE----LAVGRYPIPPPDAK 219 >3J9E-D nrPDB Length = 526 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 12/71 (16%) Query: 348 DVIVPKSRKQFRAIKKYITGE---------EYDTEEGAIEAFTNI---RDFLLLRMATNL 395 D I K K+ + ++ GE ++D A+ ++ I D + R+AT L Sbjct: 117 DKIKEKFGKELEEVYNFMNGEANAEIEDEKQFDILNKAVTSYNKILTEEDLQMRRLATAL 176 Query: 396 QSLTGKREHRE 406 Q G+R H E Sbjct: 177 QKEIGERTHAE 187 >4AN9-A nrPDB Length = 301 Score = 29.3 bits (64), Expect = 3.2, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 24/182 (13%) Query: 122 KVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTC 181 ++KPAIR+ +++ ++P A S ++ ++ Q L + Sbjct: 45 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 104 Query: 182 PREILTKICL-------FTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECF 234 P +IL K+ + + R + + D ++N +K F + LI+ Sbjct: 105 PEQILGKVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDEM 162 Query: 235 QND---TQAKLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPKA 291 N+ T++ + P R++ ++ +W +G SL + +P P A Sbjct: 163 ANEFVGTRSYM-----SPERLQGTHYSVQSDIWSMG-------LSLVEMAVGRYPRPPMA 210 Query: 292 RF 293 F Sbjct: 211 IF 212 >5KUC-A nrPDB Length = 475 Score = 29.3 bits (64), Expect = 3.6, Method: Composition-based stats. Identities = 11/65 (16%), Positives = 29/65 (44%), Gaps = 1/65 (1%) Query: 214 NGEELMKWWGFILDRLLIECFQNDTQAKLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSK 273 + + +WW L L+I+ + ++ G+ + Y + ++ L + D S Sbjct: 89 SDKTSAEWWNKNLYPLIIKSANDIASYGFKVAGDPSIKKDGYFKKLQDELDNIVDN-NSD 147 Query: 274 ENSLA 278 ++++A Sbjct: 148 DDAIA 152 >5NGW-A nrPDB Length = 389 Score = 28.5 bits (62), Expect = 5.6, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 312 WIELQE---RQEFKLSVTSSVMGISGYSLATPSLFPSSADVIVPKSRKQFRAIKKYITGE 368 W QE R EF L ++ S Y L P+ + + I K+ K FR++ G Sbjct: 282 WSYSQEALGRSEFNLEYIPTISPSSNYKLQNPN----NQNYIFEKNEKLFRSVCNAARGA 337 Query: 369 EYDTEEGAIEAFTN 382 +++ +E+F N Sbjct: 338 VGESKMVLLESFNN 351 >5KKR-C nrPDB Length = 395 Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 122 KVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTC 181 ++KPAIR+ +++ ++P A S ++ ++ Q L + Sbjct: 104 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 163 Query: 182 PREILTKICL-------FTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECF 234 P +IL K+ + + R + + D ++N +K F + LI+ Sbjct: 164 PEQILGKVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSM 221 Query: 235 QND---TQAKLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPK 290 N T++ + P R++ ++ +W +G + E ++ Y IP P D K Sbjct: 222 ANSFVGTRSYM-----SPERLQGTHYSVQSDIWSMG--LSLVEMAVGRYPIP--PPDAK 271 >3EQC-A nrPDB Length = 360 Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats. Identities = 34/179 (18%), Positives = 70/179 (39%), Gaps = 21/179 (11%) Query: 122 KVKPAIRSYKKISPELISAASTPARTLRILARRLKQSGSTVLKEIESPRFQQDLYLSFTC 181 ++KPAIR+ +++ ++P A S ++ ++ Q L + Sbjct: 69 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRI 128 Query: 182 PREILTKICL-------FTRPASQYLFPDSSKNSKKHILNGEELMKWWGFILDRLLIECF 234 P +IL K+ + + R + + D ++N +K F + LI+ Sbjct: 129 PEQILGKVSIAVIKGLTYLREKHKIMHRDV--KPSNILVNSRGEIKLCDFGVSGQLIDSM 186 Query: 235 QND---TQAKLRIPGEDPARVRSYLRGMKYPLWQVGDIFTSKENSLAVYNIPLFPDDPK 290 N T++ + P R++ ++ +W +G + E ++ Y IP P D K Sbjct: 187 ANSFVGTRSYM-----SPERLQGTHYSVQSDIWSMG--LSLVEMAVGRYPIP--PPDAK 236 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.130 0.382 Lambda K H 0.267 0.0403 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,952,771 Number of Sequences: 36641 Number of extensions: 690472 Number of successful extensions: 1596 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 1579 Number of HSP's gapped (non-prelim): 23 length of query: 436 length of database: 10,336,785 effective HSP length: 100 effective length of query: 336 effective length of database: 6,672,685 effective search space: 2242022160 effective search space used: 2242022160 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 60 (27.7 bits)