BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q07749 (152 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2LXX-A nrPDB 315 6e-87 2MP4-A nrPDB 110 2e-25 2MV2-A nrPDB 102 7e-23 1CNU-A nrPDB 87 4e-18 2MOT-A nrPDB 75 8e-15 2L72-A nrPDB 75 9e-15 1F7S-A nrPDB 75 9e-15 2I2Q-A nrPDB 75 2e-14 5IVU-A nrPDB 69 7e-13 1QPV-A nrPDB 64 2e-11 2LJ8-A nrPDB 61 2e-10 2KVK-A nrPDB 53 5e-08 5L6W-C nrPDB 48 1e-06 1AK7-A nrPDB 45 1e-05 2XFA-A nrPDB 44 3e-05 5YU8-H nrPDB 43 4e-05 3Q2B-A nrPDB 38 0.002 1M4J-A nrPDB 37 0.003 2VAC-A nrPDB 37 0.003 1HQZ-1 nrPDB 34 0.023 1V6F-A nrPDB 27 3.4 3CM1-A nrPDB 27 3.8 5DVX-A nrPDB 27 5.0 3QOY-A nrPDB 27 5.1 5IWY-A nrPDB 26 5.7 1QI7-A nrPDB 26 6.3 4HDE-A nrPDB 25 9.4 2F51-A nrPDB 25 10.0 >2LXX-A nrPDB Length = 152 Score = 315 bits (806), Expect = 6e-87, Method: Compositional matrix adjust. Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 Query: 121 LGLESLFQVQASEMSDLDEKSVKSDLMSNQRI 152 LGLESLFQVQASEMSDLDEKSVKSDLMSNQRI Sbjct: 121 LGLESLFQVQASEMSDLDEKSVKSDLMSNQRI 152 >2MP4-A nrPDB Length = 165 Score = 110 bits (275), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/155 (37%), Positives = 94/155 (60%), Gaps = 14/155 (9%) Query: 1 MASGVKVDPSCKNAYD-LLHNKHQHSYIIFKIDKN----DTAIVVEKVG--------EKN 47 M+SGV VDP + ++ L + ++ YIIFKID+N + A+ +++G Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKIDENKVIVEAAVTQDQLGITGDDYDDSSK 60 Query: 48 APYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRR 107 A + +FVE++K ++ +CRYA D + T R GA GTS ++K+IF+Q CPD A ++++ Sbjct: 61 AAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGA-GTSKMDKIIFLQICPDGASIKKK 119 Query: 108 MLYASSVRALKASLGLESLFQVQASEMSDLDEKSV 142 M+YASS A+K SLG + Q Q S+ S++ K + Sbjct: 120 MVYASSAAAIKTSLGTGKILQFQVSDESEMSHKEL 154 >2MV2-A nrPDB Length = 148 Score = 102 bits (254), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 6/152 (3%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASGV V CK Y+ + +H Y+IF I +++ I VE V ++NA Y +F+E+++K Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYI-RDEKQIDVETVADRNAEYDQFLEDIQKC 59 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 ECRY D E Q QG +S K+ + +CPD A V+++MLY+SS ALK S Sbjct: 60 --GPGECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 117 Query: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151 L G++ +QA+++S+ ++V+ L + R Sbjct: 118 LVGVQKY--IQATDLSEASREAVEEKLRATDR 147 >1CNU-A nrPDB Length = 137 Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 83/141 (58%), Gaps = 14/141 (9%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SG+ V C ++ L HQH Y+ FK++ ++T +VVE VG NA Y +F ++ + Sbjct: 1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPE--- 57 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL- 121 ++CRYA D E V G + NK+ F+ + PD+AP++ +M+Y S+ ++K L Sbjct: 58 --RDCRYAIFDYEFQV--DGGQ----RNKITFILWAPDSAPIKSKMMYTSTKDSIKKKLV 109 Query: 122 GLESLFQVQASEMSDLDEKSV 142 G++ +VQA++ +++ E +V Sbjct: 110 GIQ--VEVQATDAAEISEDAV 128 >2MOT-A nrPDB Length = 118 Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 23/137 (16%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASG+ VD +C ++ L + +I+FKI+ +T IVVEK G+ NA +E + Sbjct: 1 MASGMGVDENCVARFNELKIRKTVKWIVFKIE--NTKIVVEKDGKGNA------DEFRGA 52 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 + +CR+ D NK+ FV +CPDNAPV+ RM YASS AL Sbjct: 53 LP-ANDCRFGVYDCG--------------NKIQFVLWCPDNAPVKPRMTYASSKDALLKK 97 Query: 121 LGLESLFQVQASEMSDL 137 L + ++A EM DL Sbjct: 98 LDGATAVALEAHEMGDL 114 >2L72-A nrPDB Length = 139 Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 50/137 (36%), Positives = 71/137 (51%), Gaps = 23/137 (16%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASG+ VD +C ++ L + +I+FKI+ +T IVVEK G+ NA +E + Sbjct: 22 MASGMGVDENCVARFNELKIRKTVKWIVFKIE--NTKIVVEKDGKGNA------DEFRGA 73 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 + +CR+ D NK+ FV +CPDNAPV+ RM YASS AL Sbjct: 74 LP-ANDCRFGVYDCG--------------NKIQFVLWCPDNAPVKPRMTYASSKDALLKK 118 Query: 121 LGLESLFQVQASEMSDL 137 L + ++A EM DL Sbjct: 119 LDGATAVALEAHEMGDL 135 >1F7S-A nrPDB Length = 139 Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 48/138 (34%), Positives = 74/138 (53%), Gaps = 13/138 (9%) Query: 2 ASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLV 61 ASG+ V CK + L K H +I++KI++ +VVEKVG+ Y EF + Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61 Query: 62 EDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL 121 ECRYA D + AE +K+ F+ +CPD A VR +M+YASS K L Sbjct: 62 --ADECRYAIYDFDFVT----AENCQK-SKIFFIAWCPDIAKVRSKMIYASSKDRFKREL 114 Query: 122 -GLESLFQVQASEMSDLD 138 G++ ++QA++ +++D Sbjct: 115 DGIQ--VELQATDPTEMD 130 >2I2Q-A nrPDB Length = 137 Score = 74.7 bits (182), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 15/141 (10%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGVKV P C A+ L Y++FK++ T IVVEK + + F+ ++ + Sbjct: 4 SGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEK-KSTDKDFDTFLGDLPE--- 59 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRAL-KASL 121 K+CRYA D E + G NK+IF+ + PD AP++ +M+Y+SS L +A Sbjct: 60 --KDCRYAIYDFEFNL------GEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAFT 111 Query: 122 GLESLFQVQASEMSDLDEKSV 142 G+ + +QA++ S++ ++V Sbjct: 112 GIGT--DIQATDFSEVAYETV 130 >5IVU-A nrPDB Length = 141 Score = 69.3 bits (168), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 47/141 (33%), Positives = 79/141 (56%), Gaps = 13/141 (9%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV ++ +C Y L + YIIF ++K +T I VEK + + Y F+ + L E Sbjct: 5 SGVTLNDACVETYQQLKLGKKLKYIIFHLNKENTEIAVEKSSD-SVDYDNFLAD---LPE 60 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL- 121 D ECR+A D+E + EG NK+ FV + PD+A ++++M YASS L+ +L Sbjct: 61 D--ECRWAVYDLEY----EKEEGAGKRNKLTFVSWAPDSAKMKQKMAYASSKDILRRALT 114 Query: 122 GLESLFQVQASEMSDLDEKSV 142 G+ ++Q ++ S++ ++V Sbjct: 115 GI--AVEIQGTDFSEVAHENV 133 >1QPV-A nrPDB Length = 143 Score = 64.3 bits (155), Expect = 2e-11, Method: Compositional matrix adjust. Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 11/140 (7%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV V A++ L ++ +I+F ++ T IVV++ + Y F+E++ + Sbjct: 4 SGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKET-STDPSYDAFLEKLPE--- 59 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 +C YA D E + G EG + K++F + PD APVR +M+YASS AL+ +L Sbjct: 60 --NDCLYAIYDFEYEIN--GNEGKRS--KIVFFTWSPDTAPVRSKMVYASSKDALRRALN 113 Query: 123 LESLFQVQASEMSDLDEKSV 142 S VQ ++ S++ SV Sbjct: 114 GVST-DVQGTDFSEVSYDSV 132 >2LJ8-A nrPDB Length = 144 Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 17/149 (11%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV V C A + L +K I+ +D+ +I V+ +GE+ A + +F+E + K V Sbjct: 12 SGVSVADECVTALNDLRHKKSRYVIMHIVDQK--SIAVKTIGERGANFDQFIEAIDKNVP 69 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 C YAA D E T +K+I + + PD+ R +MLY+SS AL + Sbjct: 70 ----C-YAAFDFEYTTN------DGPRDKLILISWNPDSGAPRTKMLYSSSRDAL---VP 115 Query: 123 LESLFQ-VQASEMSDLDEKSVKSDLMSNQ 150 L FQ +QA++ S LD + + + SN+ Sbjct: 116 LTQGFQGIQANDASGLDFEEISRKVKSNR 144 >2KVK-A nrPDB Length = 144 Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 42/140 (30%), Positives = 67/140 (47%), Gaps = 14/140 (10%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV ++ S + A D L K Y++ I + I V +VGE++ Y + E+ Sbjct: 4 SGVTLEESVRGAIDDLRMKKSR-YVMMCIGADGKKIEVTEVGERSVNYTDLKEKFST--- 59 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 K C Y A D E + S K+I +Q+ PD A R +M+Y++S AL + Sbjct: 60 -EKPC-YVAFDFEYN------DAGSKREKLILIQWIPDTARPREKMMYSASRDALSSV-- 109 Query: 123 LESLFQVQASEMSDLDEKSV 142 E +QA++ S LD + + Sbjct: 110 SEGYLPIQANDESGLDAEEI 129 >5L6W-C nrPDB Length = 167 Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 13/98 (13%) Query: 38 IVVEKVGEK-NAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQ 96 I+V VG+ + PYA FV K++ D K+CRYA D + E ++F+ Sbjct: 56 ILVGDVGQTVDDPYATFV----KMLPD-KDCRYALYDATYETKESKKED------LVFIF 104 Query: 97 YCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASE 133 + P++AP++ +M+YASS A+K L G++ Q E Sbjct: 105 WAPESAPLKSKMIYASSKDAIKKKLTGIKHELQANCYE 142 >1AK7-A nrPDB Length = 174 Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 32/164 (19%) Query: 2 ASGVKV-DPSCKNAYDLL--------HNKHQHSYIIFKIDKNDTAIVVEK-----VGEKN 47 ASGV+V D C+ YD+ K + +IF + + I+VE+ VG+ Sbjct: 11 ASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVG 70 Query: 48 A----PYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAP 103 P+ FV + + K+CRYA D + E +++F + P+ AP Sbjct: 71 VTITDPFKHFVGMLPE-----KDCRYALYDASFETKESRKE------ELMFFLWAPELAP 119 Query: 104 VRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDL 146 ++ +M+YASS A+K G++ + QA+ DL+ + L Sbjct: 120 LKSKMIYASSKDAIKKKFQGIKH--ECQANGPEDLNRACIAEKL 161 >2XFA-A nrPDB Length = 148 Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 9/119 (7%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 M SGV V C ++ L KH + YII+KI+ N IVV+ V E + + ++ Sbjct: 6 MVSGVNVSDECIYEFNRLKVKHLNKYIIYKIE-NLEKIVVD-VLEHDMELTSLDNIIMRI 63 Query: 61 VEDGK--ECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRAL 117 + K ECRY D+ + EG +++ F+ + P + + +MLYA+S +L Sbjct: 64 KNNLKNTECRYIIADMPIPT----PEGVLR-DRIYFIFWSPGLSKPKEKMLYAASKESL 117 >5YU8-H nrPDB Length = 166 Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 15/106 (14%) Query: 38 IVVEKVGEK-NAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQ 96 I+V +G+ PY FV+ + +CRYA D + E ++F+ Sbjct: 55 ILVGDIGDTVEDPYTAFVKLLPL-----NDCRYALYDATYETKESKKED------LVFIF 103 Query: 97 YCPDNAPVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKS 141 + P++AP++ +M+YASS A+K G++ +QV + D+ ++S Sbjct: 104 WAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVNG--LDDIKDRS 147 >3Q2B-A nrPDB Length = 124 Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 22/140 (15%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 M SG++V+ +C ++ + + +IIF I + I++ G + E V+ + K Sbjct: 3 MISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQ--NCEIIIHSKG-ASTTLTELVQSIDK- 58 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRA-LKA 119 + +C Y D ++K+ F Y +++ R RM YASS +A LK Sbjct: 59 -NNEIQCAYVVFD--------------AVSKIHFFMYARESSNSRDRMTYASSKQAILKK 103 Query: 120 SLGLESLFQV--QASEMSDL 137 G+ L V A +++DL Sbjct: 104 IEGVNVLTSVIESAQDVADL 123 >1M4J-A nrPDB Length = 142 Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 9/63 (14%) Query: 60 LVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKA 119 L+ED + C V + Q A+G + IF+ + PD++ VR++MLYA++ LK Sbjct: 60 LLEDKQPCY-----VLFRLDSQNAQGY----EWIFIAWSPDHSHVRQKMLYAATRATLKK 110 Query: 120 SLG 122 G Sbjct: 111 EFG 113 >2VAC-A nrPDB Length = 134 Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 4/42 (9%) Query: 81 QGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 Q A+G L F+ + PDN+PVR +MLYA++ +K G Sbjct: 73 QNAQGFEWL----FLAWSPDNSPVRLKMLYAATRATVKKEFG 110 >1HQZ-1 nrPDB Length = 141 Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%) Query: 74 VEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASE 133 V+ + R G S + K+I + +CPD+AP++ R +A++ A+ +L QV A + Sbjct: 64 VQYGLARVSPPG-SDVEKIIIIGWCPDSAPLKTRASFAANFAAVANNLFKGYHVQVTARD 122 Query: 134 MSDLDEKSV 142 DLDE + Sbjct: 123 EDDLDENEL 131 >1V6F-A nrPDB Length = 151 Score = 26.9 bits (58), Expect = 3.4, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 62/123 (50%), Gaps = 13/123 (10%) Query: 27 IIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGT 86 II KIDK++ +V+++ E +P +E+K + + ++ R+ + + + Q +G Sbjct: 38 IIMKIDKDERLVVLDEELEGVSP-----DELKDELPE-RQPRF----IVYSYKYQHDDGR 87 Query: 87 STLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDL 146 + + F+ P ++M+YA S L + L +F+++ +E DL E+ ++ L Sbjct: 88 VSY-PLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELTKVFEIRNTE--DLTEEWLREKL 144 Query: 147 MSN 149 S Sbjct: 145 GSG 147 >3CM1-A nrPDB Length = 139 Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 17/29 (58%) Query: 48 APYAEFVEEMKKLVEDGKECRYAAVDVEV 76 AP +EF+ +LV G+E Y +D E+ Sbjct: 106 APLSEFLHRTYELVPAGQESDYIDIDAEI 134 >5DVX-A nrPDB Length = 260 Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust. Identities = 9/38 (23%), Positives = 23/38 (60%) Query: 37 AIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDV 74 A +E+ E+N+ Y + + ++++ E+G E + +D+ Sbjct: 137 AAFLEEGPEENSAYEQLLSRLEEIAEEGSETQVPGLDI 174 >3QOY-A nrPDB Length = 242 Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust. Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Query: 40 VEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCP 99 V+K G + P + E +KL+++ YAA+D V + GA+G N + + P Sbjct: 169 VDKAGNVHMPVGKISFEKEKLIDN----LYAAIDAVVRAKPPGAKGQYIKNMAVSLTMSP 224 >5IWY-A nrPDB Length = 158 Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 16/77 (20%) Query: 8 DPSCKNA--YDLLHNKHQHSYIIFK-----IDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 DP K+A + LL QH + I K + D I+ +K K PY +E+M+K Sbjct: 66 DPEFKDADSFKLL----QHVWGIVKQKGYVLGNIDCTIIAQK--PKMLPY---IEDMRKR 116 Query: 61 VEDGKECRYAAVDVEVT 77 + +G E + V+V+ T Sbjct: 117 IAEGLEADVSQVNVKAT 133 >1QI7-A nrPDB Length = 253 Score = 26.2 bits (56), Expect = 6.3, Method: Compositional matrix adjust. Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 20/107 (18%) Query: 36 TAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVT----------VQRQGAEG 85 T+I ++ V Y+ FV++++ V+D +Y D+ V + Q + G Sbjct: 2 TSITLDLVNPTAGQYSSFVDKIRNNVKD-PNLKYGGTDIAVIGPPSKEKFLRINFQSSRG 60 Query: 86 TSTL-----NKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLESLF 127 T +L N + DN V R + S + S L +LF Sbjct: 61 TVSLGLKRDNLYVVAYLAMDNTNVNRAYYFKSEI----TSAELTALF 103 >4HDE-A nrPDB Length = 170 Score = 25.4 bits (54), Expect = 9.4, Method: Compositional matrix adjust. Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Query: 24 HSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 H + ID+N ++ + G N PY + + +MK+L E Sbjct: 133 HGTSFYLIDQN-GKVMKKYSGISNTPYEDIIRDMKRLAE 170 >2F51-A nrPDB Length = 118 Score = 25.4 bits (54), Expect = 10.0, Method: Compositional matrix adjust. Identities = 15/80 (18%), Positives = 34/80 (42%) Query: 17 LLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEV 76 ++H H ++ +I + ++V+ P + + + E K+ + VDV+ Sbjct: 5 IVHFNGTHEALLNRIKEAPGLVLVDFFATWCGPCQRLGQILPSIAEANKDVTFIKVDVDK 64 Query: 77 TVQRQGAEGTSTLNKVIFVQ 96 A G S++ + FV+ Sbjct: 65 NGNAADAYGVSSIPALFFVK 84 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2LXX-A nrPDB 198 7e-52 2MV2-A nrPDB 170 3e-43 1CNU-A nrPDB 162 6e-41 2I2Q-A nrPDB 154 2e-38 1QPV-A nrPDB 153 2e-38 5IVU-A nrPDB 152 5e-38 2MP4-A nrPDB 147 2e-36 1F7S-A nrPDB 146 3e-36 2L72-A nrPDB 144 1e-35 2LJ8-A nrPDB 144 2e-35 2MOT-A nrPDB 144 2e-35 2KVK-A nrPDB 128 7e-31 1AK7-A nrPDB 128 9e-31 5YU8-H nrPDB 126 3e-30 2XFA-A nrPDB 125 7e-30 5L6W-C nrPDB 117 2e-27 3Q2B-A nrPDB 113 5e-26 Sequences not found previously or not previously below threshold: 1M4J-A nrPDB 68 1e-12 1V6F-A nrPDB 61 1e-10 4JD2-H nrPDB 58 1e-09 3L50-A nrPDB 56 6e-09 2VAC-A nrPDB 55 1e-08 1HQZ-1 nrPDB 44 2e-05 5YNR-A nrPDB 44 2e-05 2W0I-A nrPDB 41 1e-04 2D8B-A nrPDB 39 7e-04 2HD7-A nrPDB 39 0.001 4LIZ-A nrPDB 38 0.002 3DAW-B nrPDB 38 0.002 3LEC-A nrPDB 29 0.91 5E9J-A nrPDB 28 1.4 5B5R-A nrPDB 28 1.4 3BGV-A nrPDB 28 1.5 5ICA-C nrPDB 27 2.2 6FAI-l nrPDB 27 2.3 4U1Y-A nrPDB 26 5.5 >2LXX-A nrPDB Length = 152 Score = 198 bits (504), Expect = 7e-52, Method: Composition-based stats. Identities = 152/152 (100%), Positives = 152/152 (100%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL Sbjct: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS Sbjct: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 Query: 121 LGLESLFQVQASEMSDLDEKSVKSDLMSNQRI 152 LGLESLFQVQASEMSDLDEKSVKSDLMSNQRI Sbjct: 121 LGLESLFQVQASEMSDLDEKSVKSDLMSNQRI 152 >2MV2-A nrPDB Length = 148 Score = 170 bits (429), Expect = 3e-43, Method: Composition-based stats. Identities = 57/152 (37%), Positives = 90/152 (59%), Gaps = 6/152 (3%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASGV V CK Y+ + +H Y+IF I +++ I VE V ++NA Y +F+E+++K Sbjct: 1 MASGVTVSDVCKTTYEEIKKDKKHRYVIFYI-RDEKQIDVETVADRNAEYDQFLEDIQKC 59 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 ECRY D E Q QG +S K+ + +CPD A V+++MLY+SS ALK S Sbjct: 60 GPG--ECRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 117 Query: 121 L-GLESLFQVQASEMSDLDEKSVKSDLMSNQR 151 L G++ +QA+++S+ ++V+ L + R Sbjct: 118 LVGVQKY--IQATDLSEASREAVEEKLRATDR 147 >1CNU-A nrPDB Length = 137 Score = 162 bits (409), Expect = 6e-41, Method: Composition-based stats. Identities = 45/147 (30%), Positives = 80/147 (54%), Gaps = 12/147 (8%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SG+ V C ++ L HQH Y+ FK++ ++T +VVE VG NA Y +F ++ + Sbjct: 1 SGIAVSDDCVQKFNELKLGHQHRYVTFKMNASNTEVVVEHVGGPNATYEDFKSQLPE--- 57 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 ++CRYA D E V NK+ F+ + PD+AP++ +M+Y S+ ++K L Sbjct: 58 --RDCRYAIFDYEFQV------DGGQRNKITFILWAPDSAPIKSKMMYTSTKDSIKKKL- 108 Query: 123 LESLFQVQASEMSDLDEKSVKSDLMSN 149 + +VQA++ +++ E +V + Sbjct: 109 VGIQVEVQATDAAEISEDAVSERAKKD 135 >2I2Q-A nrPDB Length = 137 Score = 154 bits (388), Expect = 2e-38, Method: Composition-based stats. Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 13/144 (9%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGVKV P C A+ L Y++FK++ T IVVEK + + F+ ++ + Sbjct: 4 SGVKVSPECLEAFQELKLGKSLRYVVFKMNDTKTEIVVEKK-STDKDFDTFLGDLPE--- 59 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 K+CRYA D E + G NK+IF+ + PD AP++ +M+Y+SS L+ + Sbjct: 60 --KDCRYAIYDFEFNL------GEGVRNKIIFISWSPDVAPIKSKMVYSSSKDTLRRAF- 110 Query: 123 LESLFQVQASEMSDLDEKSVKSDL 146 +QA++ S++ ++V + Sbjct: 111 TGIGTDIQATDFSEVAYETVLEKV 134 >1QPV-A nrPDB Length = 143 Score = 153 bits (387), Expect = 2e-38, Method: Composition-based stats. Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 11/144 (7%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV V A++ L ++ +I+F ++ T IVV++ + Y F+E++ + Sbjct: 4 SGVAVADESLTAFNDLKLGKKYKFILFGLNDAKTEIVVKET-STDPSYDAFLEKLPE--- 59 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 +C YA D E + +K++F + PD APVR +M+YASS AL+ +L Sbjct: 60 --NDCLYAIYDFEYEING----NEGKRSKIVFFTWSPDTAPVRSKMVYASSKDALRRALN 113 Query: 123 LESLFQVQASEMSDLDEKSVKSDL 146 S VQ ++ S++ SV + Sbjct: 114 GVS-TDVQGTDFSEVSYDSVLERV 136 >5IVU-A nrPDB Length = 141 Score = 152 bits (384), Expect = 5e-38, Method: Composition-based stats. Identities = 43/143 (30%), Positives = 75/143 (52%), Gaps = 11/143 (7%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV ++ +C Y L + YIIF ++K +T I VEK + + Y F+ ++ + Sbjct: 5 SGVTLNDACVETYQQLKLGKKLKYIIFHLNKENTEIAVEKSSD-SVDYDNFLADLPE--- 60 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 ECR+A D+E EG NK+ FV + PD+A ++++M YASS L+ +L Sbjct: 61 --DECRWAVYDLEYE----KEEGAGKRNKLTFVSWAPDSAKMKQKMAYASSKDILRRAL- 113 Query: 123 LESLFQVQASEMSDLDEKSVKSD 145 ++Q ++ S++ ++V Sbjct: 114 TGIAVEIQGTDFSEVAHENVLDK 136 >2MP4-A nrPDB Length = 165 Score = 147 bits (370), Expect = 2e-36, Method: Composition-based stats. Identities = 59/159 (37%), Positives = 96/159 (60%), Gaps = 14/159 (8%) Query: 1 MASGVKVDPSCKNAYDLL-HNKHQHSYIIFKIDKN----DTAIVVEKVG--------EKN 47 M+SGV VDP + ++ L + ++ YIIFKID+N + A+ +++G Sbjct: 1 MSSGVMVDPDVQTSFQKLSEGRKEYRYIIFKIDENKVIVEAAVTQDQLGITGDDYDDSSK 60 Query: 48 APYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRR 107 A + +FVE++K ++ +CRYA D + T R GA GTS ++K+IF+Q CPD A ++++ Sbjct: 61 AAFDKFVEDVKSRTDNLTDCRYAVFDFKFTCSRVGA-GTSKMDKIIFLQICPDGASIKKK 119 Query: 108 MLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDL 146 M+YASS A+K SLG + Q Q S+ S++ K + + L Sbjct: 120 MVYASSAAAIKTSLGTGKILQFQVSDESEMSHKELLNKL 158 >1F7S-A nrPDB Length = 139 Score = 146 bits (368), Expect = 3e-36, Method: Composition-based stats. Identities = 46/144 (31%), Positives = 71/144 (49%), Gaps = 11/144 (7%) Query: 2 ASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLV 61 ASG+ V CK + L K H +I++KI++ +VVEKVG+ Y EF + Sbjct: 5 ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61 Query: 62 EDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL 121 ECRYA D + +K+ F+ +CPD A VR +M+YASS K L Sbjct: 62 --ADECRYAIYDFDFVTAEN-----CQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKREL 114 Query: 122 GLESLFQVQASEMSDLDEKSVKSD 145 ++QA++ +++D +S Sbjct: 115 DGIQ-VELQATDPTEMDLDVFRSR 137 >2L72-A nrPDB Length = 139 Score = 144 bits (364), Expect = 1e-35, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 23/138 (16%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASG+ VD +C ++ L + +I+FKI+ +T IVVEK G+ NA EF + Sbjct: 22 MASGMGVDENCVARFNELKIRKTVKWIVFKIE--NTKIVVEKDGKGNA--DEFRGALP-- 75 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 +CR+ D NK+ FV +CPDNAPV+ RM YASS AL Sbjct: 76 ---ANDCRFGVYDCG--------------NKIQFVLWCPDNAPVKPRMTYASSKDALLKK 118 Query: 121 LGLESLFQVQASEMSDLD 138 L + ++A EM DL Sbjct: 119 LDGATAVALEAHEMGDLA 136 >2LJ8-A nrPDB Length = 144 Score = 144 bits (362), Expect = 2e-35, Method: Composition-based stats. Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 17/149 (11%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVE 62 SGV V C A + L +K I+ +D+ +I V+ +GE+ A + +F+E + K V Sbjct: 12 SGVSVADECVTALNDLRHKKSRYVIMHIVDQ--KSIAVKTIGERGANFDQFIEAIDKNVP 69 Query: 63 DGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 C YAA D E T +K+I + + PD+ R +MLY+SS AL + Sbjct: 70 ----C-YAAFDFEYTTN------DGPRDKLILISWNPDSGAPRTKMLYSSSRDAL---VP 115 Query: 123 LESLFQ-VQASEMSDLDEKSVKSDLMSNQ 150 L FQ +QA++ S LD + + + SN+ Sbjct: 116 LTQGFQGIQANDASGLDFEEISRKVKSNR 144 >2MOT-A nrPDB Length = 118 Score = 144 bits (362), Expect = 2e-35, Method: Composition-based stats. Identities = 51/138 (36%), Positives = 70/138 (50%), Gaps = 23/138 (16%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 MASG+ VD +C ++ L + +I+FKI+ +T IVVEK G+ NA EF + Sbjct: 1 MASGMGVDENCVARFNELKIRKTVKWIVFKIE--NTKIVVEKDGKGNA--DEFRGALP-- 54 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKAS 120 +CR+ D NK+ FV +CPDNAPV+ RM YASS AL Sbjct: 55 ---ANDCRFGVYDCG--------------NKIQFVLWCPDNAPVKPRMTYASSKDALLKK 97 Query: 121 LGLESLFQVQASEMSDLD 138 L + ++A EM DL Sbjct: 98 LDGATAVALEAHEMGDLA 115 >2KVK-A nrPDB Length = 144 Score = 128 bits (322), Expect = 7e-31, Method: Composition-based stats. Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 14/151 (9%) Query: 2 ASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLV 61 SGV ++ S + A D L K Y++ I + I V +VGE++ Y + E+ Sbjct: 3 ISGVTLEESVRGAIDDLRMKKS-RYVMMCIGADGKKIEVTEVGERSVNYTDLKEKFST-- 59 Query: 62 EDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL 121 K C Y A D E + S K+I +Q+ PD A R +M+Y++S AL + Sbjct: 60 --EKPC-YVAFDFEYN------DAGSKREKLILIQWIPDTARPREKMMYSASRDALSSV- 109 Query: 122 GLESLFQVQASEMSDLDEKSVKSDLMSNQRI 152 E +QA++ S LD + + + ++ + Sbjct: 110 -SEGYLPIQANDESGLDAEEIIRKVRLHRSV 139 >1AK7-A nrPDB Length = 174 Score = 128 bits (321), Expect = 9e-31, Method: Composition-based stats. Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 32/164 (19%) Query: 2 ASGVKVDPS-CKNAYDLL--------HNKHQHSYIIFKIDKNDTAIVVEK-----VGEKN 47 ASGV+V C+ YD+ K + +IF + + I+VE+ VG+ Sbjct: 11 ASGVQVADEVCRIFYDMKVRKCSTPEEIKKRKKAVIFCLSADKKCIIVEEGKEILVGDVG 70 Query: 48 A----PYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAP 103 P+ FV + + K+CRYA D + E +++F + P+ AP Sbjct: 71 VTITDPFKHFVGMLPE-----KDCRYALYDASFETKESRKE------ELMFFLWAPELAP 119 Query: 104 VRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDL 146 ++ +M+YASS A+K G++ + QA+ DL+ + L Sbjct: 120 LKSKMIYASSKDAIKKKFQGIKH--ECQANGPEDLNRACIAEKL 161 >5YU8-H nrPDB Length = 166 Score = 126 bits (317), Expect = 3e-30, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 73/168 (43%), Gaps = 31/168 (18%) Query: 1 MASGVKVDPSCKNAYDLLH---------NKHQHSYIIFKIDKNDTAIVVEK--------V 43 MASGV V+ ++ + K + ++F + + I+VE+ + Sbjct: 1 MASGVTVNDEVIKVFNDMKVRKSSTPEEIKKRKKAVLFCLSDDKKQIIVEEAKQILVGDI 60 Query: 44 GEK-NAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNA 102 G+ PY FV+ + +CRYA D + E ++F+ + P++A Sbjct: 61 GDTVEDPYTAFVKLLP-----LNDCRYALYDATYETKESKKED------LVFIFWAPESA 109 Query: 103 PVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDLMSN 149 P++ +M+YASS A+K G++ +QV + D ++ L N Sbjct: 110 PLKSKMIYASSKDAIKKKFTGIKHEWQVNGLDDIK-DRSTLGEKLGGN 156 >2XFA-A nrPDB Length = 148 Score = 125 bits (314), Expect = 7e-30, Method: Composition-based stats. Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 M SGV V C ++ L KH + YII+KI+ N IVV+ V E + + ++ Sbjct: 6 MVSGVNVSDECIYEFNRLKVKHLNKYIIYKIE-NLEKIVVD-VLEHDMELTSLDNIIMRI 63 Query: 61 VEDGK--ECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRAL- 117 + K ECRY D+ + +++ F+ + P + + +MLYA+S +L Sbjct: 64 KNNLKNTECRYIIADMPIPTPE-----GVLRDRIYFIFWSPGLSKPKEKMLYAASKESLV 118 Query: 118 KASLGLESLFQVQASEMSDLDEK 140 + G+ ++ ++++ +E+ Sbjct: 119 RKINGIFKSLEITC-DINEFEEE 140 >5L6W-C nrPDB Length = 167 Score = 117 bits (292), Expect = 2e-27, Method: Composition-based stats. Identities = 40/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%) Query: 1 MASGVKVDPSCKNAYDLLHN---------KHQHSYIIFKIDKNDT--------AIVVEKV 43 MA GV V ++ + K + ++F + ++ I+V V Sbjct: 2 MACGVAVSDGVIKVFNDMKVRKSSTPEEVKKRKKAVLFCLSEDKKNIILEEGKEILVGDV 61 Query: 44 GEK-NAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNA 102 G+ + PYA FV+ + K+CRYA D + E ++F+ + P++A Sbjct: 62 GQTVDDPYATFVKMLPD-----KDCRYALYDATYETKESKKED------LVFIFWAPESA 110 Query: 103 PVRRRMLYASSVRALKASL-GLESLFQVQASEMSDLDEKSVKSDL 146 P++ +M+YASS A+K L G++ Q E D ++ L Sbjct: 111 PLKSKMIYASSKDAIKKKLTGIKHELQANCYEEVK-DRCTLAEKL 154 >3Q2B-A nrPDB Length = 124 Score = 113 bits (281), Expect = 5e-26, Method: Composition-based stats. Identities = 36/141 (25%), Positives = 64/141 (45%), Gaps = 22/141 (15%) Query: 1 MASGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKL 60 M SG++V+ +C ++ + + +IIF I + I++ G + E V+ + K Sbjct: 3 MISGIRVNDNCVTEFNNMKIRKTCGWIIFVIQ--NCEIIIHSKG-ASTTLTELVQSIDK- 58 Query: 61 VEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRA-LKA 119 + +C Y D ++K+ F Y +++ R RM YASS +A LK Sbjct: 59 -NNEIQCAYVVFDA--------------VSKIHFFMYARESSNSRDRMTYASSKQAILKK 103 Query: 120 SLGLESLFQV--QASEMSDLD 138 G+ L V A +++DL Sbjct: 104 IEGVNVLTSVIESAQDVADLK 124 >1M4J-A nrPDB Length = 142 Score = 68.3 bits (165), Expect = 1e-12, Method: Composition-based stats. Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 14/148 (9%) Query: 3 SGVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAE-FVEEMKKLV 61 +G++ K + N Y + KI + +VV + + + + + L+ Sbjct: 5 TGIQASEDVKEIFARARNGK---YRLLKISIENEQLVVGSCSPPSDSWEQDYDSFVLPLL 61 Query: 62 EDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL 121 ED + C Y ++ + QG E IF+ + PD++ VR++MLYA++ LK Sbjct: 62 EDKQPC-YVLFRLD-SQNAQGYEW-------IFIAWSPDHSHVRQKMLYAATRATLKKEF 112 Query: 122 GLESLF-QVQASEMSDLDEKSVKSDLMS 148 G + +V + D+ K L+S Sbjct: 113 GGGHIKDEVFGTVKEDVSLHGYKKYLLS 140 >1V6F-A nrPDB Length = 151 Score = 61.4 bits (147), Expect = 1e-10, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 59/144 (40%), Gaps = 15/144 (10%) Query: 7 VDPSCKNAYDLLHNKHQ--HSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDG 64 V + + ++ II KIDK++ +V+++ E +P E +E+ + Sbjct: 16 VAEDLVEKLRKFRFRKETHNAAIIMKIDKDERLVVLDEELEGVSP-DELKDELPERQP-- 72 Query: 65 KECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLE 124 R+ + + + F+ P ++M+YA S L + L Sbjct: 73 ---RFIVYSYKYQH-----DDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNKLVQTAELT 124 Query: 125 SLFQVQASEMSDLDEKSVKSDLMS 148 +F+++ +E DL E+ ++ L S Sbjct: 125 KVFEIRNTE--DLTEEWLREKLGS 146 >4JD2-H nrPDB Length = 142 Score = 58.3 bits (139), Expect = 1e-09, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 57/142 (40%), Gaps = 15/142 (10%) Query: 7 VDPSCKNAYDLLHNKHQ--HSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDG 64 VDP K + + ++ II K+DK+ +V+E + +P E E+ + Sbjct: 10 VDPELKETLRKFRFRKETNNAAIIMKVDKDRQMVVLEDELQNISP-EELKLELPERQP-- 66 Query: 65 KECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLE 124 R+ + + + F+ P ++M+YA S L + L Sbjct: 67 ---RFVVYSYKYVH-----DDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELT 118 Query: 125 SLFQVQASEMSDLDEKSVKSDL 146 +F+++ ++ DL E +K L Sbjct: 119 KVFEIRTTD--DLTETWLKEKL 138 >3L50-A nrPDB Length = 136 Score = 56.0 bits (133), Expect = 6e-09, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 57/142 (40%), Gaps = 15/142 (10%) Query: 7 VDPSCKNAYDLLHNKHQ--HSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDG 64 VDP + + ++ II K+DK+ +V+E+ + +P E E+ + Sbjct: 6 VDPELTEKLRKFRFRKETDNAAIIMKVDKDRQMVVLEEEFQNISP-EELKMELPERQP-- 62 Query: 65 KECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGLE 124 R+ + + + F+ P ++M+YA S L + L Sbjct: 63 ---RFVVYSYKYVH-----DDGRVSYPLCFIFSSPVGCKPEQQMMYAGSKNRLVQTAELT 114 Query: 125 SLFQVQASEMSDLDEKSVKSDL 146 +F+++ ++ DL E ++ L Sbjct: 115 KVFEIRTTD--DLTEAWLQEKL 134 >2VAC-A nrPDB Length = 134 Score = 54.8 bits (130), Expect = 1e-08, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 53/139 (38%), Gaps = 16/139 (11%) Query: 4 GVKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAI--VVEKVGEKNAPYAEFVEEMKKLV 61 G+ K + I I+ + E VG + Y + L+ Sbjct: 3 GIHATEELKEFFAKARAG-SVRLIKVVIEDEQLVLGASQEPVGRWDQDYDR---AVLPLL 58 Query: 62 EDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASL 121 + + C Y ++ + QG E +F+ + PDN+PVR +MLYA++ +K Sbjct: 59 DAQQPC-YLLYRLD-SQNAQGFEW-------LFLAWSPDNSPVRLKMLYAATRATVKKEF 109 Query: 122 GLESLF-QVQASEMSDLDE 139 G + ++ + DL Sbjct: 110 GGGHIKDELFGTVKDDLSF 128 >1HQZ-1 nrPDB Length = 141 Score = 44.4 bits (103), Expect = 2e-05, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 13/102 (12%) Query: 45 EKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPV 104 + + +F++ + V+ + R G S + K+I + +CPD+AP+ Sbjct: 47 STGSSFHDFLQLFDETK------------VQYGLARVSPPG-SDVEKIIIIGWCPDSAPL 93 Query: 105 RRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKSVKSDL 146 + R +A++ A+ +L QV A + DLDE + + Sbjct: 94 KTRASFAANFAAVANNLFKGYHVQVTARDEDDLDENELLMKI 135 >5YNR-A nrPDB Length = 140 Score = 44.1 bits (102), Expect = 2e-05, Method: Composition-based stats. Identities = 21/143 (14%), Positives = 52/143 (36%), Gaps = 15/143 (10%) Query: 6 KVDPSCKNAYDLLHNKH--QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVED 63 + K + +I KID+ + E++ + EF EE+ Sbjct: 11 SIPDGVKEDLKKFRFSKSTTMNALILKIDRESHELQSEQLLN-DCSIEEFKEELPSQQP- 68 Query: 64 GKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPDNAPVRRRMLYASSVRALKASLGL 123 R+ + + ++ + YCP+ + +MLYA S + + Sbjct: 69 ----RFILL-----SWCKKHSDERISYPMLLIYYCPNGSSPELQMLYAGSRNFIVNECHV 119 Query: 124 ESLFQVQASEMSDLDEKSVKSDL 146 +++ ++ ++D++ ++S Sbjct: 120 SKNTEIR--DIDEIDDELLESKF 140 >2W0I-A nrPDB Length = 135 Score = 41.4 bits (95), Expect = 1e-04, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 55/147 (37%), Gaps = 19/147 (12%) Query: 5 VKVDPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDG 64 + + P + A L + +YI K+D I + + V ++ V Sbjct: 2 MPLQPEAQRALQQLK-QKMVNYIQMKLDLERETIELVHTEPTD------VAQLPSRVPR- 53 Query: 65 KECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPD-NAPVRRRMLYASSV----RALKA 119 RY + T + L V+F+ P ++ RMLY+S +++ Sbjct: 54 DAARYHFFLYKHTHEGD------PLESVVFIYSMPGYKCSIKERMLYSSCKSRLLDSVEQ 107 Query: 120 SLGLESLFQVQASEMSDLDEKSVKSDL 146 LE +++ + ++L + + ++ Sbjct: 108 DFHLEIAKKIEIGDGAELTAEFLDDEV 134 >2D8B-A nrPDB Length = 166 Score = 39.0 bits (89), Expect = 7e-04, Method: Composition-based stats. Identities = 25/147 (17%), Positives = 57/147 (38%), Gaps = 20/147 (13%) Query: 9 PSCKNAYDLLHN--KHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKE 66 P ++A+ L K Q +Y+ +ID + I++ + ++ K + Sbjct: 28 PISRDAFQALEKLSKKQLNYVQLEIDIKNETIILANTENTE------LRDLPKRIPK-DS 80 Query: 67 CRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPD-NAPVRRRMLYASSV----RALKASL 121 RY + + + E V+F+ P +R RMLY+S ++ L Sbjct: 81 ARYHFFLYKHSHEGDYLES------VVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQL 134 Query: 122 GLESLFQVQASEMSDLDEKSVKSDLMS 148 ++ + +++ +L + ++ S Sbjct: 135 QMDVIRKIEIDNGDELTADFLYDEVHS 161 >2HD7-A nrPDB Length = 142 Score = 38.7 bits (88), Expect = 0.001, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 60/156 (38%), Gaps = 21/156 (13%) Query: 2 ASGVKVDPSCKNAYDLLHN--KHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKK 59 A GV P ++A+ L K Q +Y+ +ID + I++ + ++ K Sbjct: 1 AQGVAF-PISRDAFQALEKLSKKQLNYVQLEIDIKNETIILANTENTE------LRDLPK 53 Query: 60 LVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPD-NAPVRRRMLYASSV---- 114 + RY + + + E V+F+ P +R RMLY+S Sbjct: 54 RIPK-DSARYHFFLYKHSHEGDYLES------VVFIYSMPGYTCSIRERMLYSSCKSPLL 106 Query: 115 RALKASLGLESLFQVQASEMSDLDEKSVKSDLMSNQ 150 ++ L ++ + +++ +L + ++ Q Sbjct: 107 EIVERQLQMDVIRKIEIDNGDELTADFLYDEVHPKQ 142 >4LIZ-A nrPDB Length = 142 Score = 37.9 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 45/126 (35%), Gaps = 15/126 (11%) Query: 23 QHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQG 82 + +++F + +VV+ G+ E +K+ A+ G Sbjct: 23 EVEFVVFGVQTQPNKLVVDAKGKGG--LEEVKAALKED----------ALQFAYYRTISG 70 Query: 83 AEGTSTLNKVIFVQYCPDN-APVRRRMLYASSVRALKASLGLESLFQVQASEMSDLDEKS 141 E S K +F+ + + + R + + +K + ++ A+ + DL E Sbjct: 71 DEE-SKRVKFVFISWAGEGIKKPKLRAVMSILKGDVKNVIN-NFHIELHATSLDDLVEDE 128 Query: 142 VKSDLM 147 + + + Sbjct: 129 IAAKIK 134 >3DAW-B nrPDB Length = 164 Score = 37.9 bits (86), Expect = 0.002, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 57/149 (38%), Gaps = 20/149 (13%) Query: 9 PSCKNAYDLLHN--KHQHSYIIFKIDKNDTAIVVEKVGEKNAPYAEFVEEMKKLVEDGKE 66 P ++A+ L K Q +Y+ +ID + I++ + ++ K + Sbjct: 23 PISRDAFQALEKLSKKQLNYVQLEIDIKNETIILANTENTE------LRDLPKRIPK-DS 75 Query: 67 CRYAAVDVEVTVQRQGAEGTSTLNKVIFVQYCPD-NAPVRRRMLYASSV----RALKASL 121 RY + + + E V+F+ P +R RMLY+S ++ L Sbjct: 76 ARYHFFLYKHSHEGDYLES------VVFIYSMPGYTCSIRERMLYSSCKSPLLEIVERQL 129 Query: 122 GLESLFQVQASEMSDLDEKSVKSDLMSNQ 150 ++ + +++ +L + ++ Q Sbjct: 130 QMDVIRKIEIDNGDELTADFLYDEVHPKQ 158 >3LEC-A nrPDB Length = 230 Score = 29.0 bits (63), Expect = 0.91, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 1/93 (1%) Query: 31 IDKNDTAIVVEKVG-EKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTL 89 + ND IV E + E + Y V + + KE R+ + + + L Sbjct: 136 LAANDFEIVAEDILTENDKRYEILVVKHGHMNLTAKELRFGPFLLSNNTTVFKEKWQNEL 195 Query: 90 NKVIFVQYCPDNAPVRRRMLYASSVRALKASLG 122 NK+ F N+ + R + ++ +K L Sbjct: 196 NKLTFALNSIPNSKMEERAILEDKIQDIKEVLD 228 >5E9J-A nrPDB Length = 274 Score = 28.3 bits (61), Expect = 1.4, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 18/45 (40%), Gaps = 3/45 (6%) Query: 10 SCKNAYDLLHNKHQHSYII---FKIDKNDTAIVVEKVGEKNAPYA 51 C+ Y+ + N+ YI F + ++++K + + Sbjct: 69 QCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFD 113 >5B5R-A nrPDB Length = 468 Score = 28.3 bits (61), Expect = 1.4, Method: Composition-based stats. Identities = 6/39 (15%), Positives = 19/39 (48%) Query: 13 NAYDLLHNKHQHSYIIFKIDKNDTAIVVEKVGEKNAPYA 51 + + + ++ Y++ + + + VE+ G NA ++ Sbjct: 143 SFLNEMRYHEKNLYVVMEAVEAKQEVTVEQTGNANAIFS 181 >3BGV-A nrPDB Length = 313 Score = 28.3 bits (61), Expect = 1.5, Method: Composition-based stats. Identities = 7/45 (15%), Positives = 18/45 (40%), Gaps = 3/45 (6%) Query: 10 SCKNAYDLLHNKHQHSYII---FKIDKNDTAIVVEKVGEKNAPYA 51 C+ Y+ + N+ YI F + ++++K + + Sbjct: 72 QCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFD 116 >5ICA-C nrPDB Length = 244 Score = 27.5 bits (59), Expect = 2.2, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 7/53 (13%) Query: 43 VGEKNAPYAEFVEEMKKLVEDGKECRYAAVDVEVTVQRQGAEGTSTLNKVIFV 95 VG Y +F+E +K L AA D+E+ G +T + F+ Sbjct: 125 VGGAKGDYTDFIEHLKALPP-------AAADLELRSLSIGNGDEATNELLHFI 170 >6FAI-l nrPDB Length = 425 Score = 27.5 bits (59), Expect = 2.3, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 4/79 (5%) Query: 10 SCKNAYDLLHNKHQHSYIIFKIDKNDTAIVVE--KVGEKNAPYAEFVEEMKKLVEDGKEC 67 Y + + + I K+ + +V+ G + + EF +K +ED +C Sbjct: 190 ELIEGYPMRRLRKHKN--IPKLYSDLMCFIVDLANSGLIHCDFNEFNIMIKDKLEDENDC 247 Query: 68 RYAAVDVEVTVQRQGAEGT 86 + +D + Q + Sbjct: 248 GFVVIDFPQCISIQHQDAD 266 >4U1Y-A nrPDB Length = 819 Score = 26.3 bits (56), Expect = 5.5, Method: Composition-based stats. Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 2/52 (3%) Query: 8 DPSCKNAYDLLHNKHQHSYIIFKIDKNDTAIV--VEKVGEKNAPYAEFVEEM 57 D + ++ + L K + I+ IV V +G+ Y + + Sbjct: 165 DETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKHVKGYHYIIANL 216 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.303 0.120 0.305 Lambda K H 0.267 0.0376 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,616,982 Number of Sequences: 36641 Number of extensions: 146422 Number of successful extensions: 616 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 496 Number of HSP's gapped (non-prelim): 81 length of query: 152 length of database: 10,336,785 effective HSP length: 88 effective length of query: 64 effective length of database: 7,112,377 effective search space: 455192128 effective search space used: 455192128 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 54 (25.5 bits)