BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q07688
         (167 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

1C03-A nrPDB                                                          338   9e-94
4G78-A nrPDB                                                           37   0.003
1WN0-A nrPDB                                                           32   0.11 
2Q4F-A nrPDB                                                           32   0.15 
3US6-A nrPDB                                                           30   0.50 
4EUK-B nrPDB                                                           29   0.94 
4TN3-A nrPDB                                                           29   1.0  
5W9A-A nrPDB                                                           28   1.5  
1AW9-A nrPDB                                                           28   2.0  
4QK3-A nrPDB                                                           27   4.1  
6GH2-A nrPDB                                                           27   4.7  
5HX2-D nrPDB                                                           27   5.0  
4Y7U-A nrPDB                                                           26   7.8  

>1C03-A nrPDB
          Length = 168

 Score =  338 bits (866), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MSTIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELD 60
           MSTIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELD
Sbjct: 1   MSTIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELD 60

Query: 61  NLGHFLKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDED 120
           NLGHFLKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDED
Sbjct: 61  NLGHFLKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDED 120

Query: 121 DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL 167
           DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL
Sbjct: 121 DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL 167


>4G78-A nrPDB
          Length = 152

 Score = 37.4 bits (85), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 21  DDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDG-EKNLTELDNLGHFLKGSSAALGLQRIA 79
           DD   DF   ++  F D ++     M R L+    N  ++D   H  KGSSA++G  R+ 
Sbjct: 36  DDTSPDFVIEVMTMFFDDSEKLLNNMSRALEQVPVNFKQIDAHAHQQKGSSASVGAARVK 95

Query: 80  WVCERIQNL 88
            VC   +N 
Sbjct: 96  NVCGTFRNF 104


>1WN0-A nrPDB
          Length = 145

 Score = 32.0 bits (71), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 16  EIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGE-KNLTELDNLGHFLKGSSAALG 74
           +++  D     F   ++  F D A    +++   LD    +  ++D   H LKGSSA++G
Sbjct: 31  QMLQEDGGTPGFVAEVVTLFCDDADRIISELAALLDQPIVDFDKVDAYVHQLKGSSASVG 90

Query: 75  LQRIAWVCERIQNL 88
            Q++ + C + + L
Sbjct: 91  AQKVKFTCMQFRQL 104


>2Q4F-A nrPDB
          Length = 149

 Score = 31.6 bits (70), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 55 NLTELDNLGHFLKGSSAALGLQRIAWVC 82
          N  ++D   H LKGSSA++G Q++ + C
Sbjct: 71 NFDKVDAYVHQLKGSSASVGAQKVKFTC 98


>3US6-A nrPDB
          Length = 153

 Score = 30.0 bits (66), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 21/73 (28%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 21  DDDDSDFSKGLIIQFIDQAQT-----TFAQMQRQLDGEKNLTELDNLGHFLKGSSAALGL 75
           D+++ +F   ++  F D ++      +FA  Q+ +D +K    +D   H  KGSSA++G 
Sbjct: 35  DENNPEFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKK----VDAHVHQFKGSSASIGA 90

Query: 76  QRIAWVCERIQNL 88
           QR+   C   +N 
Sbjct: 91  QRVKNSCVAFRNF 103


>4EUK-B nrPDB
          Length = 159

 Score = 29.3 bits (64), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 21  DDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEK-NLTELDNLGHFLKGSSAALGLQRIA 79
           D+ + DF   ++  F   +      +   LD +  +  ++D   H LKGSS+++G QR+ 
Sbjct: 40  DESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVK 99

Query: 80  WVC 82
             C
Sbjct: 100 NAC 102


>4TN3-A nrPDB
          Length = 400

 Score = 28.9 bits (63), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 12/108 (11%)

Query: 7   EIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFL 66
           EI++W   NE+ +++ ++ D  K L     +  Q T  Q  R+L        +  L H L
Sbjct: 125 EILDWEESNELQNLEKEEEDILKSLTKSETEMVQQT--QYMREL--------ISELEHRL 174

Query: 67  KGSSAALGLQRIAWVCERIQNLG-RKMEHFFPNKTELVNTLSDKSIIN 113
           +GS   L LQ +  + +RI+N+  +K + F  N+  +      K +++
Sbjct: 175 QGSMMDL-LQGVDGIIKRIENMTLKKPKTFHKNQRRVFRAPDLKGMLD 221


>5W9A-A nrPDB
          Length = 193

 Score = 28.5 bits (62), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 12/94 (12%)

Query: 7   EIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFL 66
           EI++W   NE+ +++ ++ D  K L     +  Q T  Q  R+L        +  L H L
Sbjct: 98  EILDWEESNELQNLEKEEEDILKSLTKSETEMVQQT--QYMREL--------ISELEHRL 147

Query: 67  KGSSAALGLQRIAWVCERIQNLG-RKMEHFFPNK 99
           +GS   L LQ +  + +RI+N+  +K + F  N+
Sbjct: 148 QGSMMDL-LQGVDGIIKRIENMTLKKPKTFHKNQ 180


>1AW9-A nrPDB
          Length = 216

 Score = 28.1 bits (61), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 58/137 (42%), Gaps = 8/137 (5%)

Query: 1   MSTIPSEIINWTILNEI-ISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTEL 59
           M   P+ +   T+LNE  +  +    D + G   Q    A   F Q+   +DG++ L E 
Sbjct: 8   MPLSPNVVRVATVLNEKGLDFEIVPVDLTTGAHKQPDFLALNPFGQIPALVDGDEVLFES 67

Query: 60  DNLGHFLKGSSAALG---LQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGIN 116
             +  ++    A+ G   L   A   +    L  +  HF+PN + LV  L  + ++ G  
Sbjct: 68  RAINRYIASKYASEGTDLLPATASAAKLEVWLEVESHHFYPNASPLVFQLLVRPLLGGAP 127

Query: 117 ----IDEDDEEIKIQVD 129
               +D+  E++   +D
Sbjct: 128 DAAVVDKHAEQLAKVLD 144


>4QK3-A nrPDB
          Length = 249

 Score = 26.9 bits (58), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 43  FAQMQRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNLGRKME 93
           F +  +Q DG      L  LG FLK  SA  GLQ++  V + I+  G+  +
Sbjct: 130 FGKAVQQPDG------LAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSAD 174


>6GH2-A nrPDB
          Length = 913

 Score = 26.9 bits (58), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 66  LKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDEDDEEIK 125
           L+GS      +  AW      N G ++E   P+   +  T    +I+ G+  DE  E+I 
Sbjct: 636 LRGSEWIQSKEGYAWFNGYYNNDGERVEGDHPDGVRMTLTGQVFAIMGGVATDEQTEKIS 695

Query: 126 IQVDD--KDENSIY 137
             V+   KDE   Y
Sbjct: 696 QAVNRYLKDERIGY 709


>5HX2-D nrPDB
          Length = 660

 Score = 26.6 bits (57), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 6/121 (4%)

Query: 29  KGLIIQFIDQAQTTFAQM-QRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQN 87
           +G II  ID+  T   ++        K LT +D+  H + GSSA + + R      +   
Sbjct: 437 EGQIIDKIDRYYTEDVEIFNSSFAKSKMLTYVDDADHSVIGSSATIQMVREVQNFYKTPE 496

Query: 88  LGRKMEHFFPNKTELVNTLSDKSIINGINIDEDDEE-----IKIQVDDKDENSIYLILIA 142
            G K  +   +++   NT S  S    +N D   EE     ++I   D+D   I  ++I 
Sbjct: 497 AGIKYNNQIKDRSMESNTFSFNSGRKVVNPDTGLEEDVLYDVRIVSTDRDSKGIGKVIIG 556

Query: 143 K 143
            
Sbjct: 557 P 557


>4Y7U-A nrPDB
          Length = 231

 Score = 26.2 bits (56), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 43  FAQMQRQLDGEKNLTELDNLGHFLKG 68
           FA++Q  L G  +L  +DN GH  +G
Sbjct: 114 FARLQAPLQGLAHLVLVDNPGHHGRG 139


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

1C03-A nrPDB                                                          326   2e-90

Sequences not found previously or not previously below threshold:

4G78-A nrPDB                                                           40   3e-04
4TN3-A nrPDB                                                           35   0.015
1WN0-A nrPDB                                                           34   0.023
3US6-A nrPDB                                                           33   0.067
4EUK-B nrPDB                                                           33   0.079
5W9A-A nrPDB                                                           32   0.093
2Q4F-A nrPDB                                                           32   0.19 
5HX2-D nrPDB                                                           29   0.81 
3V47-C nrPDB                                                           28   2.8  
4QK3-A nrPDB                                                           27   4.0  
6GH2-A nrPDB                                                           27   4.6  
4R4Z-A nrPDB                                                           26   6.7  
5MRJ-A nrPDB                                                           26   6.9  
1Q7Q-A nrPDB                                                           26   7.1  
4Y7U-A nrPDB                                                           26   7.3  
1FR0-A nrPDB                                                           26   9.9  

>1C03-A nrPDB
          Length = 168

 Score =  326 bits (836), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MSTIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELD 60
           MSTIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELD
Sbjct: 1   MSTIPSEIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELD 60

Query: 61  NLGHFLKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDED 120
           NLGHFLKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDED
Sbjct: 61  NLGHFLKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDED 120

Query: 121 DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL 167
           DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL
Sbjct: 121 DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTNL 167


>4G78-A nrPDB
          Length = 152

 Score = 40.4 bits (93), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 21  DDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDG-EKNLTELDNLGHFLKGSSAALGLQRIA 79
           DD   DF   ++  F D ++     M R L+    N  ++D   H  KGSSA++G  R+ 
Sbjct: 36  DDTSPDFVIEVMTMFFDDSEKLLNNMSRALEQVPVNFKQIDAHAHQQKGSSASVGAARVK 95

Query: 80  WVCERIQNL 88
            VC   +N 
Sbjct: 96  NVCGTFRNF 104


>4TN3-A nrPDB
          Length = 400

 Score = 35.0 bits (79), Expect = 0.015,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 77/178 (43%), Gaps = 31/178 (17%)

Query: 7   EIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFL 66
           EI++W   NE+ +++ ++ D  K L     +  Q T  Q  R+L  E        L H L
Sbjct: 125 EILDWEESNELQNLEKEEEDILKSLTKSETEMVQQT--QYMRELISE--------LEHRL 174

Query: 67  KGSSAALGLQRIAWVCERIQNLGRKMEHFF----------PNKTELVNTLSDKS-----I 111
           +GS   L LQ +  + +RI+N+  K    F          P+   +++   D +     +
Sbjct: 175 QGSMMDL-LQGVDGIIKRIENMTLKKPKTFHKNQRRVFRAPDLKGMLDMFRDAAAEESPV 233

Query: 112 INGINIDED---DEEIKIQVDDKDENSIYLILIAKALNQSRLEFKLARIELSKYYNTN 166
           +  +NI E    DE +++++  K+    Y I I   L +S      A+ EL K    N
Sbjct: 234 LLAMNIFEMLRIDEGLRLKI-YKNTEGYYTIGIGHLLTKSP-SLNAAKSELDKAIGRN 289


>1WN0-A nrPDB
          Length = 145

 Score = 34.3 bits (77), Expect = 0.023,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 37/74 (50%), Gaps = 1/74 (1%)

Query: 16  EIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGE-KNLTELDNLGHFLKGSSAALG 74
           +++  D     F   ++  F D A    +++   LD    +  ++D   H LKGSSA++G
Sbjct: 31  QMLQEDGGTPGFVAEVVTLFCDDADRIISELAALLDQPIVDFDKVDAYVHQLKGSSASVG 90

Query: 75  LQRIAWVCERIQNL 88
            Q++ + C + + L
Sbjct: 91  AQKVKFTCMQFRQL 104


>3US6-A nrPDB
          Length = 153

 Score = 33.1 bits (74), Expect = 0.067,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 21  DDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEK-NLTELDNLGHFLKGSSAALGLQRIA 79
           D+++ +F   ++  F D ++     +   +D +  +  ++D   H  KGSSA++G QR+ 
Sbjct: 35  DENNPEFVFEVVSLFFDDSERILKDLSFAVDQQSIDFKKVDAHVHQFKGSSASIGAQRVK 94

Query: 80  WVCERIQNL 88
             C   +N 
Sbjct: 95  NSCVAFRNF 103


>4EUK-B nrPDB
          Length = 159

 Score = 32.7 bits (73), Expect = 0.079,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 21  DDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEK-NLTELDNLGHFLKGSSAALGLQRIA 79
           D+ + DF   ++  F   +      +   LD +  +  ++D   H LKGSS+++G QR+ 
Sbjct: 40  DESNPDFVSQVVTLFFQDSDRILNDLSLSLDQQVVDFKKVDPHVHQLKGSSSSIGAQRVK 99

Query: 80  WVC 82
             C
Sbjct: 100 NAC 102


>5W9A-A nrPDB
          Length = 193

 Score = 32.3 bits (72), Expect = 0.093,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 11/90 (12%)

Query: 7   EIINWTILNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFL 66
           EI++W   NE+ +++ ++ D  K L     +  Q T  Q  R+L  E        L H L
Sbjct: 98  EILDWEESNELQNLEKEEEDILKSLTKSETEMVQQT--QYMRELISE--------LEHRL 147

Query: 67  KGSSAALGLQRIAWVCERIQNLGRKMEHFF 96
           +GS   L LQ +  + +RI+N+  K    F
Sbjct: 148 QGSMMDL-LQGVDGIIKRIENMTLKKPKTF 176


>2Q4F-A nrPDB
          Length = 149

 Score = 31.6 bits (70), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 13/75 (17%)

Query: 14  LNEIISMDDDDSDFSKGLIIQFIDQAQTTFAQMQRQLDGEKNLTELDNLGHFLKGSSAAL 73
           ++E++++  DD+D       + I++  T   Q     D      ++D   H LKGSSA++
Sbjct: 43  VSEVVTLFCDDAD-------RIINEIATLLEQPVVNFD------KVDAYVHQLKGSSASV 89

Query: 74  GLQRIAWVCERIQNL 88
           G Q++ + C + +  
Sbjct: 90  GAQKVKFTCMQFRQF 104


>5HX2-D nrPDB
          Length = 660

 Score = 29.2 bits (64), Expect = 0.81,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 29  KGLIIQFIDQAQTTFAQM-QRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQN 87
           +G II  ID+  T   ++        K LT +D+  H + GSSA + + R      +   
Sbjct: 437 EGQIIDKIDRYYTEDVEIFNSSFAKSKMLTYVDDADHSVIGSSATIQMVREVQNFYKTPE 496

Query: 88  LGRKMEHFFPNKTELVNTLSDKSIINGINIDEDDEE-----IKIQVDDKDENSIYLILIA 142
            G K  +   +++   NT S  S    +N D   EE     ++I   D+D   I  ++I 
Sbjct: 497 AGIKYNNQIKDRSMESNTFSFNSGRKVVNPDTGLEEDVLYDVRIVSTDRDSKGIGKVIIG 556


>3V47-C nrPDB
          Length = 425

 Score = 27.7 bits (60), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 25/42 (59%)

Query: 99  KTELVNTLSDKSIINGINIDEDDEEIKIQVDDKDENSIYLIL 140
           + E ++ +S+++  NG+ +   D ++KIQV   D  +I + L
Sbjct: 78  RLEEIDRVSNQTQFNGVKVLSQDNQMKIQVGANDGETITIDL 119


>4QK3-A nrPDB
          Length = 249

 Score = 26.9 bits (58), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)

Query: 43  FAQMQRQLDGEKNLTELDNLGHFLKGSSAALGLQRIAWVCERIQNLGRKME 93
           F +  +Q DG      L  LG FLK  SA  GLQ++  V + I+  G+  +
Sbjct: 130 FGKAVQQPDG------LAVLGIFLKVGSAKPGLQKVVDVLDSIKTKGKSAD 174


>6GH2-A nrPDB
          Length = 913

 Score = 26.9 bits (58), Expect = 4.6,   Method: Composition-based stats.
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 2/74 (2%)

Query: 66  LKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDEDDEEIK 125
           L+GS      +  AW      N G ++E   P+   +  T    +I+ G+  DE  E+I 
Sbjct: 636 LRGSEWIQSKEGYAWFNGYYNNDGERVEGDHPDGVRMTLTGQVFAIMGGVATDEQTEKIS 695

Query: 126 IQVDD--KDENSIY 137
             V+   KDE   Y
Sbjct: 696 QAVNRYLKDERIGY 709


>4R4Z-A nrPDB
          Length = 544

 Score = 26.2 bits (56), Expect = 6.7,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 66  LKGSSAALGLQRIAWVCERIQNLGRKMEHFFPNKTELVNTLSDKSIINGINIDEDD 121
           +KG  + LG Q +  V + ++N    +E       + +  L D+S+ NG NI E D
Sbjct: 121 VKGGPSILG-QDLGLVLKTVRNGSSVVE---ATSVKKIKALDDQSLFNGKNITEKD 172


>5MRJ-A nrPDB
          Length = 396

 Score = 26.2 bits (56), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 2/32 (6%)

Query: 7   EIINWTILNEIISMDDD--DSDFSKGLIIQFI 36
           +I++W ++NEI S D +  DS FS+ L   F+
Sbjct: 212 KIVHWDVVNEIFSEDGNLRDSVFSRVLGEDFV 243


>1Q7Q-A nrPDB
          Length = 566

 Score = 26.2 bits (56), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 27/45 (60%)

Query: 109 KSIINGINIDEDDEEIKIQVDDKDENSIYLILIAKALNQSRLEFK 153
           +S+ N   +DE++ E+KI +  K   ++ ++L+ K + +S  E K
Sbjct: 407 RSLFNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERK 451


>4Y7U-A nrPDB
          Length = 231

 Score = 26.2 bits (56), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 43  FAQMQRQLDGEKNLTELDNLGHFLKGSSAALGLQRI 78
           FA++Q  L G  +L  +DN GH  +G    +G Q +
Sbjct: 114 FARLQAPLQGLAHLVLVDNPGHHGRGDFRLVGEQVV 149


>1FR0-A nrPDB
          Length = 125

 Score = 25.8 bits (55), Expect = 9.9,   Method: Composition-based stats.
 Identities = 13/40 (32%), Positives = 24/40 (60%), Gaps = 5/40 (12%)

Query: 53 EKNLTELDNLG-----HFLKGSSAALGLQRIAWVCERIQN 87
          E NLT  D  G     H +KG++ ++GL+ +  + ++IQ+
Sbjct: 48 ESNLTAQDKKGIVEEGHKIKGAAGSVGLRHLQQLGQQIQS 87


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.317    0.135    0.375 

Lambda     K      H
   0.267   0.0413    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,352,620
Number of Sequences: 36641
Number of extensions: 239715
Number of successful extensions: 679
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 653
Number of HSP's gapped (non-prelim): 49
length of query: 167
length of database: 10,336,785
effective HSP length: 90
effective length of query: 77
effective length of database: 7,039,095
effective search space: 542010315
effective search space used: 542010315
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)