BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q07071 (627 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4LC9-A nrPDB 1292 0.0 4PX2-A nrPDB 1134 0.0 3W0L-B nrPDB 771 0.0 4LZJ-A nrPDB 63 5e-10 4S12-A nrPDB 54 3e-07 5OPT-L nrPDB 32 0.77 1ZJC-A nrPDB 31 1.3 3LDG-A nrPDB 31 1.8 3Q6J-A nrPDB 30 3.5 4TWL-A nrPDB 30 3.9 >4LC9-A nrPDB Length = 636 Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust. Identities = 627/627 (100%), Positives = 627/627 (100%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI Sbjct: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 Query: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV Sbjct: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 Query: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ Sbjct: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 Query: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE Sbjct: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 Query: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI Sbjct: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 Query: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ Sbjct: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 Query: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL Sbjct: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ Sbjct: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 Query: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV Sbjct: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 Query: 601 VRSALSGPGQKRSTQALEDPPACGTLN 627 VRSALSGPGQKRSTQALEDPPACGTLN Sbjct: 601 VRSALSGPGQKRSTQALEDPPACGTLN 627 >4PX2-A nrPDB Length = 638 Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust. Identities = 553/618 (89%), Positives = 588/618 (95%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 MPGTKR+QHVIETPEPG+WELSGYEAAVPITEKSNPLT++LDKADAE IV+LLGQCDAEI Sbjct: 13 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 72 Query: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQ + TYQRLYSES+LTTM+QVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 73 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 132 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASRE TEDSALHGIEELKKVAAGKKRV+VIGISV Sbjct: 133 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 192 Query: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMD CM+NTAVFLPVLVGFNPVSMARNDPIEDW STFRQVAERMQKMQEKQ Sbjct: 193 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 252 Query: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 +AFVLNPAIGPEGLSGSSRMKGG ATKILLETLLLAAHKTVDQG+ +SQRCLLEILRTFE Sbjct: 253 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 312 Query: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 RAHQVTYSQS KIATLMK V SLEKKG V+LVGWQTLGIIAIMDGVECIHTFGADF+D+ Sbjct: 313 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 372 Query: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQK ELTNQGPQFTFSQ+DFLTSILPSLTE DTVVFIFTLDDNLTEVQ Sbjct: 373 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 432 Query: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 + E+V+EK +IQAL HSTVGQ+LP PLKKLFPS+ISITWPLLFF+YEG ++QKFQREL Sbjct: 433 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 492 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRI+NSKLFWRALAMLQRFSGQSKARCIESLL+ Sbjct: 493 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 552 Query: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 AIHFPQPLSDD+RAAPISCHVQVAHEKE+VIP ALLSLL RCSI+EA+A L+AA SVCE Sbjct: 553 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 612 Query: 601 VRSALSGPGQKRSTQALE 618 VRSAL+GPGQKR+ LE Sbjct: 613 VRSALAGPGQKRTADPLE 630 >3W0L-B nrPDB Length = 619 Score = 771 bits (1990), Expect = 0.0, Method: Compositional matrix adjust. Identities = 355/618 (57%), Positives = 485/618 (78%), Gaps = 1/618 (0%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 M GT++YQHVIETP+PG+WEL+GYE ++PI+EKSNP+TR LDKAD ++V+LL CDAEI Sbjct: 1 MRGTRKYQHVIETPDPGKWELAGYEESLPISEKSNPMTRELDKADPSQLVQLLRDCDAEI 60 Query: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEE + + Y RLYSESVL TM VA +VQEVLK PD LVVLSG GTSGR+A L++ S Sbjct: 61 FQEEDENLIHYHRLYSESVLKTMGDVAKRVQEVLKNPDDSLVVLSGCGTSGRLALLLANS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 FN L+KGL + P Y Y+++GGDRS+V S+E +ED+ G +EL+KV GKK V+ IGIS Sbjct: 121 FNGLLKGLHKTPCYCYIMSGGDRSIVTSQESSEDNPQLGAQELEKVCEGKKNVLFIGISC 180 Query: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 GLSAPF+AGQ+D+CM + V+LPVLVGFNPVSMARN+ IE W S+FRQVAER+Q + + Q Sbjct: 181 GLSAPFIAGQLDFCMRHLDVYLPVLVGFNPVSMARNERIEGWHSSFRQVAERLQTLHDSQ 240 Query: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 + F+LNPA+GPEG+SGSSRMKGG ATKILLETLLL AHK + V +++CLLEILRT+E Sbjct: 241 KGFILNPAVGPEGVSGSSRMKGGSATKILLETLLLVAHK-AESNVPVTEKCLLEILRTYE 299 Query: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 RAH+VTYSQS KIA LMKQ SL+KKG ++++GW TLG++ IMD VEC+ T+ AD++D+ Sbjct: 300 RAHKVTYSQSKKIAALMKQTATSLQKKGHLYILGWGTLGLVGIMDAVECVPTYQADWRDV 359 Query: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 RGF+ G + + N++ +L++ GPQF+ S +DF+ ++LPS++ETDTV+ IFTLDD+L +++ Sbjct: 360 RGFITGGYHSIENKEGDLSSLGPQFSISHEDFVKNVLPSVSETDTVLLIFTLDDDLNQIE 419 Query: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 L V+EK NIQ + H+T GQ LP LKK PS+I +TWP+LF +YEG ++QKFQREL Sbjct: 420 KLVALVKEKTSNIQVICHATAGQYLPNSLKKTIPSIIGLTWPILFLEYEGAFIQKFQREL 479 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 STKW+L+TV++GA+ L GKI +N M+D +I NSKLF RA ++LQR +GQS+ RC E LLQ Sbjct: 480 STKWILDTVTSGAYTLRGKIFRNFMVDFKINNSKLFHRATSVLQRLTGQSQQRCTEVLLQ 539 Query: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 +I+ Q LS+ +R I+ HV+ A ++KV+P A++SLL C+I ++++R++++ S+ Sbjct: 540 SIYGEQTLSEQIRNTTIAGHVEAAASQDKVLPVAIVSLLRSCTIQDSRSRINSSLSIRSA 599 Query: 601 VRSALSGPGQKRSTQALE 618 + S+++ PG+KR + E Sbjct: 600 IESSMNVPGRKRGAEDSE 617 >4LZJ-A nrPDB Length = 303 Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust. Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 60/257 (23%) Query: 30 ITEKSNPLTRNLDKADAEKIVKLLGQCDAEIFQEEGQIVPTYQRLYSESVLTTMLQVAGK 89 ITE+ NP + ++D+ +IV+L+ EE ++VP L ES L Q++ Sbjct: 13 ITEQRNPNSVDIDRQSTLEIVRLM--------NEEDKLVP----LAIESCLP---QISLA 57 Query: 90 VQEVLKE-PDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAG 140 V+++++ GG ++ G GTSGR+ L VS +++KG+ IAG Sbjct: 58 VEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVS-TEMVKGI---------IAG 107 Query: 141 GDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISVGLSAPFVAGQMDYCMDNTAV 200 G+ ++ E ED+ + +L+ + K V+V GI+ P+V + Y A Sbjct: 108 GECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLV-GIAASGRTPYVIAGLQYAKSLGA- 165 Query: 201 FLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQEAFVLNPAIGPEGLSGSSRM 260 L + + NP +S ++A+ + +GPE L+GSSR+ Sbjct: 166 -LTISIASNP------------KSEMAEIAD-----------IAIETIVGPEILTGSSRL 201 Query: 261 KGGGATKILLETLLLAA 277 K G A K++L L A+ Sbjct: 202 KSGTAQKMVLNMLTTAS 218 Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 51/238 (21%), Positives = 106/238 (44%), Gaps = 32/238 (13%) Query: 312 KIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDIRGFLIGDHSDM 371 +I+ ++Q+ + ++ GR+ +G T G + ++D EC TFG + ++G + G + Sbjct: 53 QISLAVEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAI 112 Query: 372 F-------NQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ-ALA 423 + + N FS++D L I S T V+ +L + ++A Sbjct: 113 RHPVEGAEDNTKAVLNDLQSIHFSKNDVLVGIAAS-GRTPYVIAGLQYAKSLGALTISIA 171 Query: 424 ERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQRELSTK 483 + + I + T+ + P ++ T + + + K Sbjct: 172 SNPKSEMAEIADIAIETI----------VGPEIL-------------TGSSRLKSGTAQK 208 Query: 484 WVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQA 541 VLN ++T + +LLGK +N M+D++ +N KL RA+ ++ + + +K ++LL+A Sbjct: 209 MVLNMLTTASMILLGKCYENLMVDVQASNEKLKARAVRIVMQATDCNKTLAEQTLLEA 266 >4S12-A nrPDB Length = 298 Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 107/254 (42%), Gaps = 62/254 (24%) Query: 30 ITEKSNPLTRNLDKADAEKIVKLLGQCDAEIFQEEGQIVPTYQRLYSESVLTTMLQVAGK 89 I+E NP T +LD +++ + +E + VP RL V+ + Q Sbjct: 10 ISESRNPDTMDLDTLSTLEMLTRI--------NDEDRKVPEAIRL----VIPNIAQAVDL 57 Query: 90 VQEVLKEPDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAGG 141 + L+ DGG ++ G GTSGR+ L V +++ LIAGG Sbjct: 58 AAKALR--DGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIG----------LIAGG 105 Query: 142 DRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISVGLSAPFVAGQMDYCMDNTAVF 201 +++ + E ED G +L+ + +VV G++ P+V G + + + Sbjct: 106 PGALLKAVEGAEDDVSLGERDLRDLQLTATDMVV-GLAASGRTPYVIGALRFARQ---LG 161 Query: 202 LP-VLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQEAFV-LNPAIGPEGLSGSSR 259 P + NP + PI QEA V ++P +GPE L+GS+R Sbjct: 162 CPTAAISCNP-----DSPI-------------------AQEALVAISPVVGPEALTGSTR 197 Query: 260 MKGGGATKILLETL 273 MK G A K++L L Sbjct: 198 MKSGTAQKLVLNML 211 Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust. Identities = 54/218 (24%), Positives = 96/218 (44%), Gaps = 16/218 (7%) Query: 323 SLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDIRGFLIGDHSDMFNQKDELTNQG 382 +L GR+ +G T G + ++D EC TFG + G + G + + + Sbjct: 61 ALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDD- 119 Query: 383 PQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQALAERVREKCQNIQALVHSTVG 442 + + D LT TD VV + + AL + C + + Sbjct: 120 --VSLGERDLRDL---QLTATDMVVGLAASGRTPYVIGALRFARQLGCPT------AAIS 168 Query: 443 QSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQRELSTKWVLNTVSTGAHVLLGKILQ 502 + +P+ + +L++I+ P++ + T + + + K VLN +STGA V LGK+ Q Sbjct: 169 CNPDSPIAQ--EALVAIS-PVVGPEAL-TGSTRMKSGTAQKLVLNMLSTGAMVKLGKVYQ 224 Query: 503 NHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 N M+D++ N KL RA ++ +G S+ +L Q Sbjct: 225 NLMVDVKATNVKLVDRACRIVVEATGASRVEAENALSQ 262 >5OPT-L nrPDB Length = 273 Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 10/118 (8%) Query: 7 YQHVIETPEPGE-----WELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEIF 61 + V+E P G+ +++ G A V + E N+ E + G+ + Sbjct: 83 FMDVVEIPRTGDRFRILYDVKGRFALVKVGEAEG----NIKLLKVENVYTSTGRIPVAMT 138 Query: 62 QEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSV 119 + +I R + L L+ KV +++K +G +V+++GG GR+ +MS+ Sbjct: 139 HDGHRIRYPDPRTHRGDTLVYNLK-EKKVVDLIKSSNGKVVMVTGGANRGRIGEIMSI 195 >1ZJC-A nrPDB Length = 418 Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 20/33 (60%) Query: 208 FNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 F+ V + NDP+E+WR ++ QK+Q+K Sbjct: 179 FDIVRIDGNDPVENWRQHIANLSVYAQKLQQKN 211 >3LDG-A nrPDB Length = 384 Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 18/94 (19%) Query: 488 TVSTGAHVLLGKILQNHMLDLR--------------IANSKLFWRALAMLQRFSGQSKAR 533 T + G ++GK L+N LD + IA S L+ R+ ++ G+ AR Sbjct: 10 TAAAGIEAVVGKELRNLGLDCQVENGRVLFKGNIETIAKSNLWLRSADRIKIVVGEFPAR 69 Query: 534 CIESLLQAIHFPQPLSDDVRAAPISCHVQVAHEK 567 E L Q ++ D P+ C VA K Sbjct: 70 TFEELFQGVY----ALDWENYLPLGCQFPVAKAK 99 >3Q6J-A nrPDB Length = 523 Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 16/60 (26%) Query: 82 TMLQVAGKVQEVLKEPDGGLVVLS--------------GGGTSGRM--AFLMSVSFNQLM 125 T+ Q A ++ E+L+ PDGG V+ + GGG +GR A+L ++ QL+ Sbjct: 12 TINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGRFGSAYLRAMGGRQLI 71 >4TWL-A nrPDB Length = 246 Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust. Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 10/89 (11%) Query: 497 LGKILQNH-MLDLRIANSKLFWRALAMLQRFSGQSKARCI---ESLLQAIHFPQPLSDDV 552 LGK+ +N+ +D R+ NS +L F G + + I E L+ IHF P ++ Sbjct: 50 LGKLRRNYRAVDARLRNS-----GHDVLVDFKGNAGSLSINRVEYQLKRIHFHSPSEHEM 104 Query: 553 RAAPISCHVQVAHEKEKVIPTALLSLLLR 581 Q+ HE + A++S+L R Sbjct: 105 NGERFDLEAQLVHESQDQ-KRAVVSILFR 132 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4LC9-A nrPDB 1018 0.0 4PX2-A nrPDB 976 0.0 3W0L-B nrPDB 947 0.0 4LZJ-A nrPDB 244 8e-65 4S12-A nrPDB 242 3e-64 Sequences not found previously or not previously below threshold: 3Q6J-A nrPDB 34 0.22 5A1Y-E nrPDB 33 0.51 4RTB-A nrPDB 31 1.8 6OIK-A nrPDB 31 2.4 5FA5-A nrPDB 30 3.0 1BW0-A nrPDB 29 5.6 4GGV-A nrPDB 29 6.2 CONVERGED! >4LC9-A nrPDB Length = 636 Score = 1018 bits (2631), Expect = 0.0, Method: Composition-based stats. Identities = 627/627 (100%), Positives = 627/627 (100%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI Sbjct: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 Query: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV Sbjct: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 Query: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ Sbjct: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 Query: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE Sbjct: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 Query: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI Sbjct: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 Query: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ Sbjct: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 Query: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL Sbjct: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ Sbjct: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 Query: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV Sbjct: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 Query: 601 VRSALSGPGQKRSTQALEDPPACGTLN 627 VRSALSGPGQKRSTQALEDPPACGTLN Sbjct: 601 VRSALSGPGQKRSTQALEDPPACGTLN 627 >4PX2-A nrPDB Length = 638 Score = 976 bits (2523), Expect = 0.0, Method: Composition-based stats. Identities = 553/618 (89%), Positives = 588/618 (95%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 MPGTKR+QHVIETPEPG+WELSGYEAAVPITEKSNPLT++LDKADAE IV+LLGQCDAEI Sbjct: 13 MPGTKRFQHVIETPEPGKWELSGYEAAVPITEKSNPLTQDLDKADAENIVRLLGQCDAEI 72 Query: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEEGQ + TYQRLYSES+LTTM+QVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS Sbjct: 73 FQEEGQALSTYQRLYSESILTTMVQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 132 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 FNQLMKGLGQKPLYTYLIAGGDRSVVASRE TEDSALHGIEELKKVAAGKKRV+VIGISV Sbjct: 133 FNQLMKGLGQKPLYTYLIAGGDRSVVASREGTEDSALHGIEELKKVAAGKKRVIVIGISV 192 Query: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 GLSAPFVAGQMD CM+NTAVFLPVLVGFNPVSMARNDPIEDW STFRQVAERMQKMQEKQ Sbjct: 193 GLSAPFVAGQMDCCMNNTAVFLPVLVGFNPVSMARNDPIEDWSSTFRQVAERMQKMQEKQ 252 Query: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 +AFVLNPAIGPEGLSGSSRMKGG ATKILLETLLLAAHKTVDQG+ +SQRCLLEILRTFE Sbjct: 253 KAFVLNPAIGPEGLSGSSRMKGGSATKILLETLLLAAHKTVDQGIAASQRCLLEILRTFE 312 Query: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 RAHQVTYSQS KIATLMK V SLEKKG V+LVGWQTLGIIAIMDGVECIHTFGADF+D+ Sbjct: 313 RAHQVTYSQSPKIATLMKSVSTSLEKKGHVYLVGWQTLGIIAIMDGVECIHTFGADFRDV 372 Query: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 RGFLIGDHSDMFNQK ELTNQGPQFTFSQ+DFLTSILPSLTE DTVVFIFTLDDNLTEVQ Sbjct: 373 RGFLIGDHSDMFNQKAELTNQGPQFTFSQEDFLTSILPSLTEIDTVVFIFTLDDNLTEVQ 432 Query: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 + E+V+EK +IQAL HSTVGQ+LP PLKKLFPS+ISITWPLLFF+YEG ++QKFQREL Sbjct: 433 TIVEQVKEKTNHIQALAHSTVGQTLPIPLKKLFPSIISITWPLLFFEYEGNFIQKFQREL 492 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 STKWVLNTVSTGAHVLLGKILQNHMLDLRI+NSKLFWRALAMLQRFSGQSKARCIESLL+ Sbjct: 493 STKWVLNTVSTGAHVLLGKILQNHMLDLRISNSKLFWRALAMLQRFSGQSKARCIESLLR 552 Query: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 AIHFPQPLSDD+RAAPISCHVQVAHEKE+VIP ALLSLL RCSI+EA+A L+AA SVCE Sbjct: 553 AIHFPQPLSDDIRAAPISCHVQVAHEKEQVIPIALLSLLFRCSITEAQAHLAAAPSVCEA 612 Query: 601 VRSALSGPGQKRSTQALE 618 VRSAL+GPGQKR+ LE Sbjct: 613 VRSALAGPGQKRTADPLE 630 >3W0L-B nrPDB Length = 619 Score = 947 bits (2448), Expect = 0.0, Method: Composition-based stats. Identities = 355/618 (57%), Positives = 485/618 (78%), Gaps = 1/618 (0%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 M GT++YQHVIETP+PG+WEL+GYE ++PI+EKSNP+TR LDKAD ++V+LL CDAEI Sbjct: 1 MRGTRKYQHVIETPDPGKWELAGYEESLPISEKSNPMTRELDKADPSQLVQLLRDCDAEI 60 Query: 61 FQEEGQIVPTYQRLYSESVLTTMLQVAGKVQEVLKEPDGGLVVLSGGGTSGRMAFLMSVS 120 FQEE + + Y RLYSESVL TM VA +VQEVLK PD LVVLSG GTSGR+A L++ S Sbjct: 61 FQEEDENLIHYHRLYSESVLKTMGDVAKRVQEVLKNPDDSLVVLSGCGTSGRLALLLANS 120 Query: 121 FNQLMKGLGQKPLYTYLIAGGDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISV 180 FN L+KGL + P Y Y+++GGDRS+V S+E +ED+ G +EL+KV GKK V+ IGIS Sbjct: 121 FNGLLKGLHKTPCYCYIMSGGDRSIVTSQESSEDNPQLGAQELEKVCEGKKNVLFIGISC 180 Query: 181 GLSAPFVAGQMDYCMDNTAVFLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQ 240 GLSAPF+AGQ+D+CM + V+LPVLVGFNPVSMARN+ IE W S+FRQVAER+Q + + Q Sbjct: 181 GLSAPFIAGQLDFCMRHLDVYLPVLVGFNPVSMARNERIEGWHSSFRQVAERLQTLHDSQ 240 Query: 241 EAFVLNPAIGPEGLSGSSRMKGGGATKILLETLLLAAHKTVDQGVVSSQRCLLEILRTFE 300 + F+LNPA+GPEG+SGSSRMKGG ATKILLETLLL AHK + V +++CLLEILRT+E Sbjct: 241 KGFILNPAVGPEGVSGSSRMKGGSATKILLETLLLVAHK-AESNVPVTEKCLLEILRTYE 299 Query: 301 RAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDI 360 RAH+VTYSQS KIA LMKQ SL+KKG ++++GW TLG++ IMD VEC+ T+ AD++D+ Sbjct: 300 RAHKVTYSQSKKIAALMKQTATSLQKKGHLYILGWGTLGLVGIMDAVECVPTYQADWRDV 359 Query: 361 RGFLIGDHSDMFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ 420 RGF+ G + + N++ +L++ GPQF+ S +DF+ ++LPS++ETDTV+ IFTLDD+L +++ Sbjct: 360 RGFITGGYHSIENKEGDLSSLGPQFSISHEDFVKNVLPSVSETDTVLLIFTLDDDLNQIE 419 Query: 421 ALAERVREKCQNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQREL 480 L V+EK NIQ + H+T GQ LP LKK PS+I +TWP+LF +YEG ++QKFQREL Sbjct: 420 KLVALVKEKTSNIQVICHATAGQYLPNSLKKTIPSIIGLTWPILFLEYEGAFIQKFQREL 479 Query: 481 STKWVLNTVSTGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQ 540 STKW+L+TV++GA+ L GKI +N M+D +I NSKLF RA ++LQR +GQS+ RC E LLQ Sbjct: 480 STKWILDTVTSGAYTLRGKIFRNFMVDFKINNSKLFHRATSVLQRLTGQSQQRCTEVLLQ 539 Query: 541 AIHFPQPLSDDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSISEAKARLSAASSVCEV 600 +I+ Q LS+ +R I+ HV+ A ++KV+P A++SLL C+I ++++R++++ S+ Sbjct: 540 SIYGEQTLSEQIRNTTIAGHVEAAASQDKVLPVAIVSLLRSCTIQDSRSRINSSLSIRSA 599 Query: 601 VRSALSGPGQKRSTQALE 618 + S+++ PG+KR + E Sbjct: 600 IESSMNVPGRKRGAEDSE 617 >4LZJ-A nrPDB Length = 303 Score = 244 bits (623), Expect = 8e-65, Method: Composition-based stats. Identities = 61/287 (21%), Positives = 125/287 (43%), Gaps = 37/287 (12%) Query: 268 ILLETL-LLAAHKTVDQGVVSSQRCLLEILRTFERAHQVT----YSQSSKIATLMKQVGI 322 I+L++L L + V ++ LEI+R ++ S +I+ ++Q+ Sbjct: 4 IILKSLSTLITEQRNPNSVDIDRQSTLEIVRLMNEEDKLVPLAIESCLPQISLAVEQIVQ 63 Query: 323 SLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDIRGFLIGDHSDMF-------NQK 375 + ++ GR+ +G T G + ++D EC TFG + ++G + G + + Sbjct: 64 AFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVSTEMVKGIIAGGECAIRHPVEGAEDNT 123 Query: 376 DELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQ-ALAERVREKCQNIQ 434 + N FS++D L I S T V+ +L + ++A + + I Sbjct: 124 KAVLNDLQSIHFSKNDVLVGIAAS-GRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIA 182 Query: 435 ALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQRELSTKWVLNTVSTGAH 494 + T+ + P ++ T + + + K VLN ++T + Sbjct: 183 DIAIETI----------VGPEIL-------------TGSSRLKSGTAQKMVLNMLTTASM 219 Query: 495 VLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQA 541 +LLGK +N M+D++ +N KL RA+ ++ + + +K ++LL+A Sbjct: 220 ILLGKCYENLMVDVQASNEKLKARAVRIVMQATDCNKTLAEQTLLEA 266 Score = 206 bits (523), Expect = 3e-53, Method: Composition-based stats. Identities = 69/257 (26%), Positives = 118/257 (45%), Gaps = 60/257 (23%) Query: 30 ITEKSNPLTRNLDKADAEKIVKLLGQCDAEIFQEEGQIVPTYQRLYSESVLTTMLQVAGK 89 ITE+ NP + ++D+ +IV+L+ EE ++VP L ES L Q++ Sbjct: 13 ITEQRNPNSVDIDRQSTLEIVRLM--------NEEDKLVP----LAIESCLP---QISLA 57 Query: 90 VQEVLKE-PDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAG 140 V+++++ GG ++ G GTSGR+ L VS +++KG+ IAG Sbjct: 58 VEQIVQAFQQGGRLIYIGAGTSGRLGVLDASECPPTFGVS-TEMVKGI---------IAG 107 Query: 141 GDRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISVGLSAPFVAGQMDYCMDNTAV 200 G+ ++ E ED+ + +L+ + K V+V GI+ P+V + Y A Sbjct: 108 GECAIRHPVEGAEDNTKAVLNDLQSIHFSKNDVLV-GIAASGRTPYVIAGLQYAKSLGA- 165 Query: 201 FLPVLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQEAFVLNPAIGPEGLSGSSRM 260 L + + NP +S ++A+ + +GPE L+GSSR+ Sbjct: 166 -LTISIASNP------------KSEMAEIAD-----------IAIETIVGPEILTGSSRL 201 Query: 261 KGGGATKILLETLLLAA 277 K G A K++L L A+ Sbjct: 202 KSGTAQKMVLNMLTTAS 218 >4S12-A nrPDB Length = 298 Score = 242 bits (618), Expect = 3e-64, Method: Composition-based stats. Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 16/237 (6%) Query: 311 SKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADFQDIRGFLIGDHSD 370 IA + +L GR+ +G T G + ++D EC TFG + G + G Sbjct: 49 PNIAQAVDLAAKALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGA 108 Query: 371 MFNQKDELTNQGPQFTFSQDDFLTSILPSLTETDTVVFIFTLDDNLTEVQALAERVREKC 430 + + + + + D LT TD VV + + AL + C Sbjct: 109 LLKAVEGAEDD---VSLGERDLRDL---QLTATDMVVGLAASGRTPYVIGALRFARQLGC 162 Query: 431 QNIQALVHSTVGQSLPAPLKKLFPSLISITWPLLFFDYEGTYVQKFQRELSTKWVLNTVS 490 + + + +P+ + +L++I+ P++ + T + + + K VLN +S Sbjct: 163 PT------AAISCNPDSPIAQ--EALVAIS-PVVGPEAL-TGSTRMKSGTAQKLVLNMLS 212 Query: 491 TGAHVLLGKILQNHMLDLRIANSKLFWRALAMLQRFSGQSKARCIESLLQAIHFPQP 547 TGA V LGK+ QN M+D++ N KL RA ++ +G S+ +L Q +P Sbjct: 213 TGAMVKLGKVYQNLMVDVKATNVKLVDRACRIVVEATGASRVEAENALSQTEFEVKP 269 Score = 204 bits (519), Expect = 9e-53, Method: Composition-based stats. Identities = 67/258 (25%), Positives = 108/258 (41%), Gaps = 62/258 (24%) Query: 30 ITEKSNPLTRNLDKADAEKIVKLLGQCDAEIFQEEGQIVPTYQRLYSESVLTTMLQVAGK 89 I+E NP T +LD +++ + +E + VP RL V+ + Q Sbjct: 10 ISESRNPDTMDLDTLSTLEMLTRI--------NDEDRKVPEAIRL----VIPNIAQAVDL 57 Query: 90 VQEVLKEPDGGLVVLSGGGTSGRMAFL--------MSVSFNQLMKGLGQKPLYTYLIAGG 141 + L+ DGG ++ G GTSGR+ L V +++ LIAGG Sbjct: 58 AAKALR--DGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIG----------LIAGG 105 Query: 142 DRSVVASREQTEDSALHGIEELKKVAAGKKRVVVIGISVGLSAPFVAGQMDYCMDNTAVF 201 +++ + E ED G +L+ + +VV G++ P+V G + + + Sbjct: 106 PGALLKAVEGAEDDVSLGERDLRDLQLTATDMVV-GLAASGRTPYVIGALRFARQ---LG 161 Query: 202 LP-VLVGFNPVSMARNDPIEDWRSTFRQVAERMQKMQEKQEAFV-LNPAIGPEGLSGSSR 259 P + NP + PI QEA V ++P +GPE L+GS+R Sbjct: 162 CPTAAISCNP-----DSPI-------------------AQEALVAISPVVGPEALTGSTR 197 Query: 260 MKGGGATKILLETLLLAA 277 MK G A K++L L A Sbjct: 198 MKSGTAQKLVLNMLSTGA 215 >3Q6J-A nrPDB Length = 523 Score = 34.0 bits (76), Expect = 0.22, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 19/76 (25%) Query: 82 TMLQVAGKVQEVLKEPDGGLVVL--------------SGGGTSGRMAFLMSVSFNQLMKG 127 T+ Q A ++ E+L+ PDGG V+ GGG +GR ++ + M G Sbjct: 12 TINQWATRIDEILEAPDGGEVIYNVDENDPREYDAIFIGGGAAGR----FGSAYLRAMGG 67 Query: 128 LGQKPLYTYLIAGGDR 143 Q + + GG Sbjct: 68 -RQLIVDRWPFLGGSC 82 >5A1Y-E nrPDB Length = 874 Score = 32.8 bits (73), Expect = 0.51, Method: Composition-based stats. Identities = 22/90 (24%), Positives = 42/90 (46%), Gaps = 20/90 (22%) Query: 550 DDVRAAPISCHVQVAHEKEKVIPTALLSLLLRCSI---SEAKARLSAASSVCEVVRSALS 606 ++VRA +S + + E+++P ++L LL RC + +E + R + +V E + AL+ Sbjct: 485 EEVRAGAVSALAKFGAQNEEMLP-SILVLLKRCVMDDDNEVRDRATFYLNVLEQKQKALN 543 Query: 607 -----------GPG-----QKRSTQALEDP 620 PG Q+ + + E P Sbjct: 544 AGYILNGLTVSIPGLEKALQQYTLEPSEKP 573 >4RTB-A nrPDB Length = 477 Score = 30.9 bits (68), Expect = 1.8, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 4/56 (7%) Query: 281 VDQGVVSSQRCLLEILRTFERAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQ 336 V +G +Q + + RT+E ++V + +I+ Q+ L+K R+ L+ Sbjct: 15 VPRGSHMTQEIITLVQRTYEIVNKVNRNPKEEIS----QIIQKLQKGERLSLIEAG 66 >6OIK-A nrPDB Length = 354 Score = 30.5 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 29/64 (45%) Query: 298 TFERAHQVTYSQSSKIATLMKQVGISLEKKGRVHLVGWQTLGIIAIMDGVECIHTFGADF 357 T + +S I +K+ GIS K ++ L+G G I+ ++ IH G Sbjct: 4 TLSAEDKAAVERSKMIEKNLKEDGISAAKDVKLLLLGAGESGKSTIVKQMKIIHEDGFSG 63 Query: 358 QDIR 361 +D++ Sbjct: 64 EDVK 67 >5FA5-A nrPDB Length = 650 Score = 30.2 bits (66), Expect = 3.0, Method: Composition-based stats. Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 11/98 (11%) Query: 171 KRVVVIGISVGLSAPFVAGQMDYCMDNTAVFLPVLVGFNP--VSMARNDPIEDWRSTFRQ 228 V V+ + P V + V NP V N E+W S Sbjct: 369 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNAVVTLENWQFEEWGSQVTV 428 Query: 229 VAERMQKMQEKQEA-FVLNPAIG--------PEGLSGS 257 V+ M++ ++A +++ +G PE L G+ Sbjct: 429 VSSDMREWVAPEKADIIVSELLGSFADNELSPECLDGA 466 >1BW0-A nrPDB Length = 416 Score = 29.4 bits (64), Expect = 5.6, Method: Composition-based stats. Identities = 22/122 (18%), Positives = 45/122 (36%), Gaps = 4/122 (3%) Query: 30 ITEKSNPLTRNLDKADAEKIVKLLGQCDAEIFQEEGQIVPTYQRLYSESVLTTMLQVAGK 89 +T SNP N + E IV+L + +F +E ++ + T++ Sbjct: 183 VTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFETT 242 Query: 90 VQEVLKEPDGGLVVLSGGGTSGRMAFLMSVSFNQLMKGLGQKPLYTYLIAGGDRSVVASR 149 V V+ +V+ G R+ +L+ V + + ++ G +VV + Sbjct: 243 VPRVILGGTAKNLVVPGW----RLGWLLYVDPHGNGPSFLEGLKRVGMLVCGPCTVVQAA 298 Query: 150 EQ 151 Sbjct: 299 LG 300 >4GGV-A nrPDB Length = 418 Score = 29.0 bits (63), Expect = 6.2, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 12/132 (9%) Query: 1 MPGTKRYQHVIETPEPGEWELSGYEAAVPITEKSNPLTRNLDKADAEKIVKLLGQCDAEI 60 + G + V+ G W + GY A+ I + T +L + L + D + Sbjct: 38 LRGQRPESPVVFDETQGVWNVYGYPEAMDILNDHDTFTSDLAHLLPVSVDAPLLEGD--M 95 Query: 61 FQEEGQIVPTYQRLYSESVLTTML-----QVAGKVQEVLKEPDGGLVVLSGGGTSGRMAF 115 Q + Y++L S + ++ +VA +E+L DG + + + Sbjct: 96 SQMDPPRHRKYRQLVSRAFTPRLVADMETRVADITRELLDAVDGKPEIEIAADLAYPLPV 155 Query: 116 -----LMSVSFN 122 L+ V Sbjct: 156 IVIAELLGVPAG 167 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.309 0.123 0.307 Lambda K H 0.267 0.0375 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,389,981 Number of Sequences: 36641 Number of extensions: 673292 Number of successful extensions: 2009 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 11 Number of HSP's that attempted gapping in prelim test: 1963 Number of HSP's gapped (non-prelim): 33 length of query: 627 length of database: 10,336,785 effective HSP length: 103 effective length of query: 524 effective length of database: 6,562,762 effective search space: 3438887288 effective search space used: 3438887288 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 62 (28.6 bits)