BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q06549 (142 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1R5T-A nrPDB 297 1e-81 1UX0-A nrPDB 102 7e-23 1MQ0-A nrPDB 101 1e-22 2FR6-A nrPDB 97 3e-21 3DMO-A nrPDB 91 1e-19 2D30-A nrPDB 89 7e-19 3R2N-A nrPDB 84 3e-17 3MPZ-A nrPDB 65 7e-12 3IJF-X nrPDB 65 1e-11 4EG2-A nrPDB 59 8e-10 1CTU-A nrPDB 44 3e-05 2Z3H-A nrPDB 36 0.006 3DH1-A nrPDB 28 1.3 4ECL-A nrPDB 28 1.7 3OJ6-A nrPDB 27 2.9 3CIG-A nrPDB 27 3.9 >1R5T-A nrPDB Length = 142 Score = 297 bits (760), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 142/142 (100%), Positives = 142/142 (100%) Query: 1 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCI 60 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCI Sbjct: 1 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCI 60 Query: 61 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG 120 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG Sbjct: 61 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG 120 Query: 121 SRSKVMTMGELLPMAFGPSHLN 142 SRSKVMTMGELLPMAFGPSHLN Sbjct: 121 SRSKVMTMGELLPMAFGPSHLN 142 >1UX0-A nrPDB Length = 136 Score = 102 bits (253), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 52/125 (41%), Positives = 81/125 (64%), Gaps = 3/125 (2%) Query: 18 ALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRS 77 ALKA +++Y+PYS F+VG ++LT + ++ G N+ENA+YS C CAE++A+ + + G + Sbjct: 10 ALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEQTALFKAVSEGD-T 68 Query: 78 GWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFG 137 ++ + + D+ VSPCG CRQ I+E KD +V+ N G + K MT+ ELLP AF Sbjct: 69 EFQMLAVAADTPGP-VSPCGACRQVISELCTKDVIVVLTNLQG-QIKEMTVEELLPGAFS 126 Query: 138 PSHLN 142 L+ Sbjct: 127 SEDLH 131 >1MQ0-A nrPDB Length = 140 Score = 101 bits (251), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 52/123 (42%), Positives = 76/123 (61%), Gaps = 3/123 (2%) Query: 20 KACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGW 79 +A + +Y PYSHF VG ++LT IF G N+ENA Y ICAER+A+ + + G++ + Sbjct: 18 EAKQSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAERTAIQKAVSEGYKD-F 76 Query: 80 KCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFGPS 139 + + I D +D +SPCG CRQ + EF ++P+ M G+ VMT+ ELLP +FGP Sbjct: 77 RAIAIASDMQDDFISPCGACRQVMREFGT-NWPVYMTKPDGTYI-VMTVQELLPSSFGPE 134 Query: 140 HLN 142 L Sbjct: 135 DLQ 137 >2FR6-A nrPDB Length = 146 Score = 97.1 bits (240), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 3/138 (2%) Query: 5 GIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAER 64 +E ++ L ++ +A + +Y PYS F VG ++LT + IF+G N+ENA Y +CAER Sbjct: 9 AVEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAER 68 Query: 65 SAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSK 124 +A+ + + G++ ++ + I D +++ +SPCG CRQ + EF D+ + M G+ Sbjct: 69 TAIQKAISEGYKD-FRAIAISSDLQEEFISPCGACRQVMREFGT-DWAVYMTKPDGT-FV 125 Query: 125 VMTMGELLPMAFGPSHLN 142 V T+ ELLP +FGP L Sbjct: 126 VRTVQELLPASFGPEDLQ 143 >3DMO-A nrPDB Length = 138 Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 3/110 (2%) Query: 28 PYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSG-WKCMVICG 86 PYS+F+VG +++TN+ +F G NVENASY C CAER+A+ L AG+R G + + + G Sbjct: 28 PYSNFKVGAALVTNDGKVFHGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAVVG 87 Query: 87 DSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAF 136 ++ ++PCG CRQ + E +V+ N G +V + G+LLP AF Sbjct: 88 ETHGP-IAPCGACRQVMIELGKPTLEVVLTNMQGD-VRVTSAGDLLPDAF 135 >2D30-A nrPDB Length = 141 Score = 89.0 bits (219), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 48/123 (39%), Positives = 75/123 (60%), Gaps = 3/123 (2%) Query: 14 LKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMA 73 L + A++A + +Y PYS F+VG ++LT + ++ G NVENASY C CAER+A+ + + Sbjct: 15 LIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFKAVSE 74 Query: 74 GHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLP 133 G + + + I D++ + V PCG CRQ + E +D + + N G + T+GELLP Sbjct: 75 GDKE-FVAIAIVADTK-RPVPPCGACRQVMVELCKQDTKVYLSNLHGDVQET-TVGELLP 131 Query: 134 MAF 136 AF Sbjct: 132 GAF 134 >3R2N-A nrPDB Length = 138 Score = 83.6 bits (205), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 53/137 (38%), Positives = 70/137 (51%), Gaps = 8/137 (5%) Query: 4 GGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAE 63 G + D + L++AA+ A SY+PYS+F VG + N+ + TG NVENASY +CAE Sbjct: 3 GSMGDVNWDTLQKAAVAARANSYAPYSNFPVGVAGFVNDGRLITGVNVENASYGLALCAE 62 Query: 64 RSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRS 123 S MI L A G V C D + PCG CRQ + E + I+ + Sbjct: 63 CS-MISALYA-TGGGRLVAVYCVDGNGDSLMPCGRCRQLLYEHGGPELKIM------TPK 114 Query: 124 KVMTMGELLPMAFGPSH 140 V TM +LLP AF P Sbjct: 115 GVQTMAQLLPQAFNPQE 131 >3MPZ-A nrPDB Length = 150 Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 8/130 (6%) Query: 13 ALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLM 72 AL+ A++ +Y+PYS F VG + L ++ TG NVEN SY +CAE A++ L Sbjct: 27 ALRSKAIEVSRHAYAPYSGFPVGAAALVDDGRTVTGCNVENVSYGLGLCAE-CAVVCALH 85 Query: 73 AGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELL 132 +G G + C + + PCG CRQ + E + +++ ++ G R + ELL Sbjct: 86 SGG-GGRLVALSCVGPDGGVLMPCGRCRQVLLEHGGPE--LLIDHAHGPRP----LRELL 138 Query: 133 PMAFGPSHLN 142 P AFGP L Sbjct: 139 PDAFGPDDLG 148 >3IJF-X nrPDB Length = 133 Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 44/140 (31%), Positives = 65/140 (46%), Gaps = 16/140 (11%) Query: 6 IEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERS 65 + D L+ A +A +Y PYS F VG + L ++ + TG NVEN SY +CAE + Sbjct: 1 MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECA 60 Query: 66 AMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEF----VVKDFPIVMLNSTGS 121 + + G G + C D + PCG CRQ + E ++ D P+ Sbjct: 61 VVCALHSTG--GGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLIDHPV-------- 110 Query: 122 RSKVMTMGELLPMAFGPSHL 141 + +G+LLP AFG L Sbjct: 111 --RPRRLGDLLPDAFGLDDL 128 >4EG2-A nrPDB Length = 298 Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust. Identities = 46/145 (31%), Positives = 67/145 (46%), Gaps = 20/145 (13%) Query: 1 MKVGGIEDRQLEALKRAALK--ACELSYSPYSHFRVGCSILTNNDVIFTGANVE--NASY 56 + + G+ED L R AL A SY+P S F VG + + ++ GAN+E A Sbjct: 45 LTLSGLEDADL----RVALLPIAAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQL 100 Query: 57 SNCICAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVML 116 + AE+ A+ M G + G + I SPCG CRQF+NE + L Sbjct: 101 GQTVHAEQCAISHAWMKGEK-GVADITIN-------FSPCGHCRQFMNELTTASSLKIQL 152 Query: 117 NSTGSRSKVMTMGELLPMAFGPSHL 141 ++ T+ E LP +FGP+ L Sbjct: 153 PKRAAK----TLQEYLPESFGPADL 173 Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 36/64 (56%) Query: 12 EALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVL 71 E L + AL+A +S+SPY+ G ++ + I+ GA ENA+++ + + A+ Q + Sbjct: 193 EELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPPLQVALAQAM 252 Query: 72 MAGH 75 M G Sbjct: 253 MMGE 256 >1CTU-A nrPDB Length = 294 Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 16/118 (13%) Query: 27 SPYSHFRVGCSILTNNDVIFTGANVE--NASYSNCICAERSAMIQVLMAGHRSGWKCMVI 84 +P S+F VG + + GAN+E A+ + AE+SA+ ++G ++ V Sbjct: 66 TPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITV- 124 Query: 85 CGDSEDQCVSPCGVCRQFINEFVVK-DFPIVMLNSTGSRSKVMTMGELLPMAFGPSHL 141 +PCG CRQF+NE D I + + + + LP AFGP L Sbjct: 125 -------NYTPCGHCRQFMNELNSGLDLRIHL-----PGREAHALRDYLPDAFGPKDL 170 Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 37/64 (57%) Query: 12 EALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVL 71 +AL +AA+ A S+ PYS G ++ + IF+G+ ENA+++ + + A+I + Sbjct: 189 DALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPLQGALILLN 248 Query: 72 MAGH 75 + G+ Sbjct: 249 LKGY 252 >2Z3H-A nrPDB Length = 130 Score = 36.2 bits (82), Expect = 0.006, Method: Compositional matrix adjust. Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 5/105 (4%) Query: 32 FRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGDSEDQ 91 + V + L+++ IFTG NV + ++ CAE ++ A C+V G+ Sbjct: 27 YSVASAALSSDGRIFTGVNVYH--FTGGPCAEL-VVLGTAAAAAAGNLTCIVAIGNENRG 83 Query: 92 CVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAF 136 +SPCG CRQ + + ++ +S G + V + ELLP + Sbjct: 84 ILSPCGRCRQVLLDL-HPGIKAIVKDSDGQPTAV-GIRELLPSGY 126 >3DH1-A nrPDB Length = 189 Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 5/71 (7%) Query: 8 DRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAM 67 ++ +E A +A E + P VGC ++ NN+V+ G N N + + AE A+ Sbjct: 27 EKWMEEAMHMAKEALENTEVP-----VGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAI 81 Query: 68 IQVLMAGHRSG 78 QVL +SG Sbjct: 82 DQVLDWCRQSG 92 >4ECL-A nrPDB Length = 374 Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 20/37 (54%) Query: 52 ENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGDS 88 E+ YS A R ++I +L G+ G+ + CG+S Sbjct: 261 ESVGYSRAFTATRDSLIAILPIGYADGFPRNLSCGNS 297 >3OJ6-A nrPDB Length = 158 Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust. Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 7/110 (6%) Query: 28 PYSHF-RVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICG 86 P S F V + ++++ +F+G NV + ++ CAE + AG + I Sbjct: 46 PVSDFYSVASAAISDDGRVFSGVNVYH--FNGGPCAELVVLGVAAAAGATKLTHIVAIAN 103 Query: 87 DSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAF 136 + +SPCG CRQ + + +++ G K++ + ELLP + Sbjct: 104 EGRG-ILSPCGRCRQVLADL-HPGIKAIVIGKEG--PKMVAVEELLPSIY 149 >3CIG-A nrPDB Length = 697 Score = 26.6 bits (57), Expect = 3.9, Method: Composition-based stats. Identities = 11/35 (31%), Positives = 19/35 (54%) Query: 2 KVGGIEDRQLEALKRAALKACELSYSPYSHFRVGC 36 K+ + +LE L ++L+ +LS +P F GC Sbjct: 156 KILALRSEELEFLGNSSLRKLDLSSNPLKEFSPGC 190 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1R5T-A nrPDB 197 1e-51 2FR6-A nrPDB 180 2e-46 1MQ0-A nrPDB 175 7e-45 2D30-A nrPDB 163 2e-41 1UX0-A nrPDB 162 6e-41 3R2N-A nrPDB 161 1e-40 3IJF-X nrPDB 158 1e-39 3MPZ-A nrPDB 154 2e-38 3DMO-A nrPDB 140 2e-34 4EG2-A nrPDB 139 3e-34 1CTU-A nrPDB 123 3e-29 Sequences not found previously or not previously below threshold: 2Z3H-A nrPDB 59 8e-10 3OJ6-A nrPDB 59 1e-09 3B8F-A nrPDB 36 0.005 3IXV-A nrPDB 31 0.21 5D2Y-A nrPDB 28 1.9 4HC8-A nrPDB 27 4.0 4QHR-A nrPDB 27 4.2 3SUC-A nrPDB 26 5.6 1W9D-M nrPDB 25 8.5 5WB8-A nrPDB 25 9.7 >1R5T-A nrPDB Length = 142 Score = 197 bits (501), Expect = 1e-51, Method: Composition-based stats. Identities = 142/142 (100%), Positives = 142/142 (100%) Query: 1 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCI 60 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCI Sbjct: 1 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCI 60 Query: 61 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG 120 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG Sbjct: 61 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG 120 Query: 121 SRSKVMTMGELLPMAFGPSHLN 142 SRSKVMTMGELLPMAFGPSHLN Sbjct: 121 SRSKVMTMGELLPMAFGPSHLN 142 >2FR6-A nrPDB Length = 146 Score = 180 bits (456), Expect = 2e-46, Method: Composition-based stats. Identities = 50/138 (36%), Positives = 83/138 (60%), Gaps = 3/138 (2%) Query: 5 GIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAER 64 +E ++ L ++ +A + +Y PYS F VG ++LT + IF+G N+ENA Y +CAER Sbjct: 9 AVEPEHVQRLLLSSREAKKSAYCPYSRFPVGAALLTGDGRIFSGCNIENACYPLGVCAER 68 Query: 65 SAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSK 124 +A+ + + G++ ++ + I D +++ +SPCG CRQ + EF D+ + M G+ Sbjct: 69 TAIQKAISEGYKD-FRAIAISSDLQEEFISPCGACRQVMREFGT-DWAVYMTKPDGT-FV 125 Query: 125 VMTMGELLPMAFGPSHLN 142 V T+ ELLP +FGP L Sbjct: 126 VRTVQELLPASFGPEDLQ 143 >1MQ0-A nrPDB Length = 140 Score = 175 bits (443), Expect = 7e-45, Method: Composition-based stats. Identities = 53/139 (38%), Positives = 82/139 (58%), Gaps = 3/139 (2%) Query: 4 GGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAE 63 ++ ++ L + +A + +Y PYSHF VG ++LT IF G N+ENA Y ICAE Sbjct: 2 SHMKPECVQQLLVCSQEAKQSAYCPYSHFPVGAALLTQEGRIFKGCNIENACYPLGICAE 61 Query: 64 RSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRS 123 R+A+ + + G++ ++ + I D +D +SPCG CRQ + EF ++P+ M G+ Sbjct: 62 RTAIQKAVSEGYKD-FRAIAIASDMQDDFISPCGACRQVMREFGT-NWPVYMTKPDGTYI 119 Query: 124 KVMTMGELLPMAFGPSHLN 142 VMT+ ELLP +FGP L Sbjct: 120 -VMTVQELLPSSFGPEDLQ 137 >2D30-A nrPDB Length = 141 Score = 163 bits (413), Expect = 2e-41, Method: Composition-based stats. Identities = 49/133 (36%), Positives = 78/133 (58%), Gaps = 3/133 (2%) Query: 10 QLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQ 69 + L + A++A + +Y PYS F+VG ++LT + ++ G NVENASY C CAER+A+ + Sbjct: 11 NSKQLIQEAIEARKQAYVPYSKFQVGAALLTQDGKVYRGCNVENASYGLCNCAERTALFK 70 Query: 70 VLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMG 129 + G + + + I D++ + V PCG CRQ + E +D + + N G + T+G Sbjct: 71 AVSEGDKE-FVAIAIVADTK-RPVPPCGACRQVMVELCKQDTKVYLSNLHGDVQET-TVG 127 Query: 130 ELLPMAFGPSHLN 142 ELLP AF L+ Sbjct: 128 ELLPGAFLAEDLH 140 >1UX0-A nrPDB Length = 136 Score = 162 bits (409), Expect = 6e-41, Method: Composition-based stats. Identities = 53/133 (39%), Positives = 83/133 (62%), Gaps = 3/133 (2%) Query: 10 QLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQ 69 + L ALKA +++Y+PYS F+VG ++LT + ++ G N+ENA+YS C CAE++A+ + Sbjct: 2 NRQELITEALKARDMAYAPYSKFQVGAALLTKDGKVYRGCNIENAAYSMCNCAEQTALFK 61 Query: 70 VLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMG 129 + G + ++ + + D+ VSPCG CRQ I+E KD +V+ N G + K MT+ Sbjct: 62 AVSEGD-TEFQMLAVAADTPGP-VSPCGACRQVISELCTKDVIVVLTNLQG-QIKEMTVE 118 Query: 130 ELLPMAFGPSHLN 142 ELLP AF L+ Sbjct: 119 ELLPGAFSSEDLH 131 >3R2N-A nrPDB Length = 138 Score = 161 bits (406), Expect = 1e-40, Method: Composition-based stats. Identities = 50/137 (36%), Positives = 69/137 (50%), Gaps = 8/137 (5%) Query: 4 GGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAE 63 G + D + L++AA+ A SY+PYS+F VG + N+ + TG NVENASY +CAE Sbjct: 3 GSMGDVNWDTLQKAAVAARANSYAPYSNFPVGVAGFVNDGRLITGVNVENASYGLALCAE 62 Query: 64 RSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRS 123 S + + G G V C D + PCG CRQ + E + I+ + Sbjct: 63 CSMISALYATG--GGRLVAVYCVDGNGDSLMPCGRCRQLLYEHGGPELKIM------TPK 114 Query: 124 KVMTMGELLPMAFGPSH 140 V TM +LLP AF P Sbjct: 115 GVQTMAQLLPQAFNPQE 131 >3IJF-X nrPDB Length = 133 Score = 158 bits (399), Expect = 1e-39, Method: Composition-based stats. Identities = 43/136 (31%), Positives = 62/136 (45%), Gaps = 8/136 (5%) Query: 6 IEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERS 65 + D L+ A +A +Y PYS F VG + L ++ + TG NVEN SY +CAE + Sbjct: 1 MPDVDWNMLRGNATQAAAGAYVPYSRFAVGAAALVDDGRVVTGCNVENVSYGLTLCAECA 60 Query: 66 AMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKV 125 + + G G + C D + PCG CRQ + E + I + Sbjct: 61 VVCALHSTG--GGRLLALACVDGHGSVLMPCGRCRQVLLEHGGSELLI------DHPVRP 112 Query: 126 MTMGELLPMAFGPSHL 141 +G+LLP AFG L Sbjct: 113 RRLGDLLPDAFGLDDL 128 >3MPZ-A nrPDB Length = 150 Score = 154 bits (388), Expect = 2e-38, Method: Composition-based stats. Identities = 46/134 (34%), Positives = 66/134 (49%), Gaps = 8/134 (5%) Query: 9 RQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMI 68 AL+ A++ +Y+PYS F VG + L ++ TG NVEN SY +CAE A++ Sbjct: 23 VNWNALRSKAIEVSRHAYAPYSGFPVGAAALVDDGRTVTGCNVENVSYGLGLCAE-CAVV 81 Query: 69 QVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTM 128 L +G G + C + + PCG CRQ + E + I ++ G R + Sbjct: 82 CALHSG-GGGRLVALSCVGPDGGVLMPCGRCRQVLLEHGGPELLI--DHAHGPRP----L 134 Query: 129 GELLPMAFGPSHLN 142 ELLP AFGP L Sbjct: 135 RELLPDAFGPDDLG 148 >3DMO-A nrPDB Length = 138 Score = 140 bits (352), Expect = 2e-34, Method: Composition-based stats. Identities = 46/110 (41%), Positives = 69/110 (62%), Gaps = 3/110 (2%) Query: 28 PYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSG-WKCMVICG 86 PYS+F+VG +++TN+ +F G NVENASY C CAER+A+ L AG+R G + + + G Sbjct: 28 PYSNFKVGAALVTNDGKVFHGCNVENASYGLCNCAERTALFSALAAGYRPGEFAAIAVVG 87 Query: 87 DSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAF 136 ++ ++PCG CRQ + E +V+ N G +V + G+LLP AF Sbjct: 88 ETHGP-IAPCGACRQVMIELGKPTLEVVLTNMQGD-VRVTSAGDLLPDAF 135 >4EG2-A nrPDB Length = 298 Score = 139 bits (351), Expect = 3e-34, Method: Composition-based stats. Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 20/146 (13%) Query: 1 MKVGGIEDRQLEALKRAALK--ACELSYSPYSHFRVGCSILTNNDVIFTGANVE--NASY 56 + + G+ED L R AL A SY+P S F VG + + ++ GAN+E A Sbjct: 45 LTLSGLEDADL----RVALLPIAAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQL 100 Query: 57 SNCICAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVML 116 + AE+ A+ M G + G + I SPCG CRQF+NE + L Sbjct: 101 GQTVHAEQCAISHAWMKGEK-GVADITI-------NFSPCGHCRQFMNELTTASSLKIQL 152 Query: 117 NSTGSRSKVMTMGELLPMAFGPSHLN 142 ++ T+ E LP +FGP+ L Sbjct: 153 PKRAAK----TLQEYLPESFGPADLG 174 Score = 44.0 bits (102), Expect = 2e-05, Method: Composition-based stats. Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 1/102 (0%) Query: 12 EALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVL 71 E L + AL+A +S+SPY+ G ++ + I+ GA ENA+++ + + A+ Q + Sbjct: 193 EELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPPLQVALAQAM 252 Query: 72 MAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPI 113 M G +S +S Q E + D P+ Sbjct: 253 MMGESFEDIEAAALVESATGKISHL-ADTQATLEVINPDIPL 293 >1CTU-A nrPDB Length = 294 Score = 123 bits (308), Expect = 3e-29, Method: Composition-based stats. Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 16/119 (13%) Query: 27 SPYSHFRVGCSILTNNDVIFTGANVE--NASYSNCICAERSAMIQVLMAGHRSGWKCMVI 84 +P S+F VG + + GAN+E A+ + AE+SA+ ++G ++ V Sbjct: 66 TPLSNFNVGAIARGVSGTWYFGANMEFIGATMQQTVHAEQSAISHAWLSGEKALAAITV- 124 Query: 85 CGDSEDQCVSPCGVCRQFINEFVVK-DFPIVMLNSTGSRSKVMTMGELLPMAFGPSHLN 142 +PCG CRQF+NE D I + + + + LP AFGP L Sbjct: 125 -------NYTPCGHCRQFMNELNSGLDLRIHL-----PGREAHALRDYLPDAFGPKDLE 171 Score = 41.6 bits (96), Expect = 1e-04, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 37/64 (57%) Query: 12 EALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVL 71 +AL +AA+ A S+ PYS G ++ + IF+G+ ENA+++ + + A+I + Sbjct: 189 DALSQAAIAAANRSHMPYSKSPSGVALECKDGRIFSGSYAENAAFNPTLPPLQGALILLN 248 Query: 72 MAGH 75 + G+ Sbjct: 249 LKGY 252 >2Z3H-A nrPDB Length = 130 Score = 59.0 bits (141), Expect = 8e-10, Method: Composition-based stats. Identities = 31/110 (28%), Positives = 52/110 (47%), Gaps = 6/110 (5%) Query: 28 PYSH-FRVGCSILTNNDVIFTGANVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICG 86 P S + V + L+++ IFTG NV + ++ CAE ++ A C+V G Sbjct: 22 PISEDYSVASAALSSDGRIFTGVNVYH--FTGGPCAE-LVVLGTAAAAAAGNLTCIVAIG 78 Query: 87 DSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAF 136 + +SPCG CRQ + + ++ +S G + V + ELLP + Sbjct: 79 NENRGILSPCGRCRQVLLDL-HPGIKAIVKDSDGQPTAV-GIRELLPSGY 126 >3OJ6-A nrPDB Length = 158 Score = 58.6 bits (140), Expect = 1e-09, Method: Composition-based stats. Identities = 31/136 (22%), Positives = 55/136 (40%), Gaps = 9/136 (6%) Query: 4 GGIEDRQLEALKRAALKACELSY--SPYSHFR-VGCSILTNNDVIFTGANVENASYSNCI 60 G + L A + + P S F V + ++++ +F+G NV + ++ Sbjct: 20 GSMAPEPLSAAGQNLIDTATSVINGIPVSDFYSVASAAISDDGRVFSGVNVYH--FNGGP 77 Query: 61 CAERSAMIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINEFVVKDFPIVMLNSTG 120 CAE + AG + I + +SPCG CRQ + + IV+ Sbjct: 78 CAELVVLGVAAAAGATKLTHIVAIANEGRG-ILSPCGRCRQVLADLHPGIKAIVIGK--- 133 Query: 121 SRSKVMTMGELLPMAF 136 K++ + ELLP + Sbjct: 134 EGPKMVAVEELLPSIY 149 >3B8F-A nrPDB Length = 142 Score = 36.3 bits (82), Expect = 0.005, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 40/102 (39%), Gaps = 8/102 (7%) Query: 36 CSILTNNDVIFTGA--NVENASYSNCICAERSAMIQVLMAGHRSGWKCMVICGDSEDQ-- 91 +I + I+T +V NAS C E A+++ + + + + Sbjct: 27 AAIRVEDGTIYTSVAPDVINASTEL--CMETGAILEAHKFQKKVTHSICLARENEHSELK 84 Query: 92 CVSPCGVCRQFINEFVVKDFPIVMLNSTGSRSKVMTMGELLP 133 +SPCGVC++ + + + + N+ + EL P Sbjct: 85 VLSPCGVCQERLF-YWGPEVQCAITNAKQD-IIFKPLKELQP 124 >3IXV-A nrPDB Length = 626 Score = 30.9 bits (68), Expect = 0.21, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 22/75 (29%), Gaps = 2/75 (2%) Query: 68 IQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINE--FVVKDFPIVMLNSTGSRSKV 125 + + + + C RQ +NE FV V+ V Sbjct: 48 FHARHLAEATELYVALYGAKDFNDFIHLCEQARQIVNEGMFVYAVSVAVLHREDCKGITV 107 Query: 126 MTMGELLPMAFGPSH 140 + E+ P F P+ Sbjct: 108 PPIQEVFPDRFVPAE 122 >5D2Y-A nrPDB Length = 264 Score = 27.8 bits (60), Expect = 1.9, Method: Composition-based stats. Identities = 5/21 (23%), Positives = 12/21 (57%) Query: 33 RVGCSILTNNDVIFTGANVEN 53 R+ +++ + + G+N EN Sbjct: 6 RIDAALIMKDGRVVKGSNFEN 26 >4HC8-A nrPDB Length = 255 Score = 26.6 bits (57), Expect = 4.0, Method: Composition-based stats. Identities = 12/48 (25%), Positives = 23/48 (47%) Query: 1 MKVGGIEDRQLEALKRAALKACELSYSPYSHFRVGCSILTNNDVIFTG 48 + V ++D ++ AL A +A + VG ++T N +F+G Sbjct: 15 IAVISMDDGKVNALGPAMQQALNAAIDNADRDDVGALVITGNGRVFSG 62 >4QHR-A nrPDB Length = 356 Score = 26.6 bits (57), Expect = 4.2, Method: Composition-based stats. Identities = 7/28 (25%), Positives = 16/28 (57%) Query: 52 ENASYSNCICAERSAMIQVLMAGHRSGW 79 E+ Y + CA+++ I ++ G+ G+ Sbjct: 250 EHVGYGSTFCAQQAMDIAIVSIGYGDGY 277 >3SUC-A nrPDB Length = 772 Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 23/55 (41%), Gaps = 2/55 (3%) Query: 2 KVGGIEDRQLEALK--RAALKACELSYSPYSHFRVGCSILTNNDVIFTGANVENA 54 G D + ++ A+++ Y PY F V I ++ + TGA NA Sbjct: 27 TYGAKGDGVTDDIRAFEKAIESGFPVYVPYGTFMVSRGIKLPSNTVLTGAGKRNA 81 >1W9D-M nrPDB Length = 501 Score = 25.5 bits (54), Expect = 8.5, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%) Query: 103 INEFVVKDFPIVMLNSTGSRSKVMTMGELLPMAFGPSH 140 + EF + F + N T + + T+GE LP +F P Sbjct: 278 MKEFFLGWFMGPLTNGTYPQIMIDTVGERLP-SFSPEE 314 >5WB8-A nrPDB Length = 507 Score = 25.5 bits (54), Expect = 9.7, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Query: 48 GANVENAS-YSNCICAERSA-MIQVLMAGHRSGWKCMVICGDSEDQCVSPCGVCRQFINE 105 GA EN + ICA++ + + +C C + S C VCR+F +E Sbjct: 177 GAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRE---SDCLVCRKFRDE 233 Query: 106 FVVKDF--PIVMLNSTGSRSKVMTMGELLPMAFG 137 KD P+++ N T + V G+ +FG Sbjct: 234 ATCKDTCPPLMLYNPTTYQMDVNPEGKY---SFG 264 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.129 0.355 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,780,779 Number of Sequences: 36641 Number of extensions: 146189 Number of successful extensions: 590 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 511 Number of HSP's gapped (non-prelim): 44 length of query: 142 length of database: 10,336,785 effective HSP length: 87 effective length of query: 55 effective length of database: 7,149,018 effective search space: 393195990 effective search space used: 393195990 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.0 bits) S2: 54 (25.5 bits)