BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q06385
         (345 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

4TU3-A nrPDB                                                          702   0.0  
2ZII-A nrPDB                                                          581   e-166
3KN1-A nrPDB                                                          192   2e-49
5I3E-A nrPDB                                                           32   0.42 
2WBE-C nrPDB                                                           28   4.1  
3C8X-A nrPDB                                                           28   4.9  
3FL7-A nrPDB                                                           28   6.7  
3MX0-A nrPDB                                                           28   7.2  
3MBW-A nrPDB                                                           28   8.1  

>4TU3-A nrPDB
          Length = 345

 Score =  702 bits (1812), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 345/345 (100%), Positives = 345/345 (100%)

Query: 1   MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRD 60
           MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRD
Sbjct: 1   MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRD 60

Query: 61  NINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKR 120
           NINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKR
Sbjct: 61  NINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKR 120

Query: 121 FDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQV 180
           FDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQV
Sbjct: 121 FDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQV 180

Query: 181 RERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEY 240
           RERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEY
Sbjct: 181 RERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEY 240

Query: 241 FPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEK 300
           FPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEK
Sbjct: 241 FPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEK 300

Query: 301 ETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 345
           ETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL
Sbjct: 301 ETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 345


>2ZII-A nrPDB
          Length = 288

 Score =  581 bits (1497), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 286/286 (100%), Positives = 286/286 (100%)

Query: 60  DNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARK 119
           DNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARK
Sbjct: 3   DNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARK 62

Query: 120 RFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ 179
           RFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ
Sbjct: 63  RFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ 122

Query: 180 VRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNE 239
           VRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNE
Sbjct: 123 VRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNE 182

Query: 240 YFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLE 299
           YFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLE
Sbjct: 183 YFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLE 242

Query: 300 KETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 345
           KETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL
Sbjct: 243 KETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 288


>3KN1-A nrPDB
          Length = 249

 Score =  192 bits (487), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 19/238 (7%)

Query: 67  LTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKRFDLSER 126
           LTLMEEVLL+GL+DREGY SFWND IS  LRGC++IELALRG++++     R++  L+ +
Sbjct: 11  LTLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRK 70

Query: 127 LIEVIDSSKTGEVLLDETLQLMKNDEPL-SISNWIDLLSGETWNLLKINYQLKQVRERLA 185
           +I   D+  TG+VLLDE L+ +K  +P  ++ NWI+LLSGETWN LK++YQL+ VRERLA
Sbjct: 71  VICKSDAP-TGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLA 129

Query: 186 KGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEYFPETT 245
           K LV+KGVL TE +NF LFDM THP+ + + K+ + ++V         E   +++  +  
Sbjct: 130 KNLVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKV--------QEAVLDKWVNDPH 181

Query: 246 SFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEKETE 303
                R LALI  ++ ++VLEN    L  E+ D A  R  +++        DL+ E E
Sbjct: 182 RMD-RRLLALIYLAHASDVLENAFAPLLDEQYDLATKRVRQLL--------DLDPEVE 230


>5I3E-A nrPDB
          Length = 358

 Score = 32.0 bits (71), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 7/61 (11%)

Query: 79  RDREGYLSFWNDSISYALRGCIIIELALRGKI-RILD-DSARKRFDLSERLIEVIDSSKT 136
           ++R+    FWND +   L+  + +E  +RGKI  +LD D   K +D     I+ ID  K 
Sbjct: 221 KNRKWGKDFWNDLVGPTLKADMYVETWIRGKIPPVLDSDGVHKTYD-----IKFIDLRKL 275

Query: 137 G 137
           G
Sbjct: 276 G 276


>2WBE-C nrPDB
          Length = 373

 Score = 28.5 bits (62), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 51/239 (21%), Positives = 96/239 (40%), Gaps = 51/239 (21%)

Query: 81  REGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKRFDLSERLIEVIDSSKTGEVL 140
           R  YL  +N+ +      C ++      KIRI DDS +K   + + L E+   SK     
Sbjct: 160 RISYLELYNEEL------CDLLSTDDTTKIRIFDDSTKKGSVIIQGLEEIPVHSK----- 208

Query: 141 LDETLQLMK--NDEPLSISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVDKGVLRTEM 198
            D+  +L++   +   + +  ++  S  +  +  I   +++       G+  + +L+  +
Sbjct: 209 -DDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRE------NGIEGEDMLK--I 259

Query: 199 KNFFLFDMA-THPIADASCKEAIK--------------RRVLSVLVSRNMELSY------ 237
               L D+A +  ++ A  ++ I+               RV++ LV R   + Y      
Sbjct: 260 GKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLT 319

Query: 238 ---NEYFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQ 293
               E     T   II T+     S G   +E  L+TLEY  R K I    E+  + ++
Sbjct: 320 RLLQESLGGRTKTSIIATI-----SPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTK 373


>3C8X-A nrPDB
          Length = 206

 Score = 28.5 bits (62), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)

Query: 145 LQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVDKGVLRTEMKNFFLF 204
           +Q + ND P+ + +  +++SG+  N L+ N+  +   ER+            E+K F + 
Sbjct: 59  MQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIF----------IELK-FTVR 107

Query: 205 DMATHPIADASCKEAI 220
           D  + P   +SCKE  
Sbjct: 108 DCNSFPGGASSCKETF 123


>3FL7-A nrPDB
          Length = 536

 Score = 27.7 bits (60), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)

Query: 145 LQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVDKGVLRTEMKNFFLF 204
           +Q + ND P+ + +  +++SG+  N L+ N+  +   ER+            E+K F + 
Sbjct: 60  MQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAERIF----------IELK-FTVR 108

Query: 205 DMATHPIADASCKEAI 220
           D  + P   +SCKE  
Sbjct: 109 DCNSFPGGASSCKETF 124


>3MX0-A nrPDB
          Length = 409

 Score = 27.7 bits (60), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)

Query: 145 LQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVDKGVLRTEMKNFFLF 204
           +Q + ND P+ + +  +++SG+  N L+ N+  +   ER          +  E+K F + 
Sbjct: 29  MQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAER----------IFIELK-FTVR 77

Query: 205 DMATHPIADASCKEAI 220
           D  + P   +SCKE  
Sbjct: 78  DCNSFPGGASSCKETF 93


>3MBW-A nrPDB
          Length = 330

 Score = 27.7 bits (60), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 11/76 (14%)

Query: 145 LQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVDKGVLRTEMKNFFLF 204
           +Q + ND P+ + +  +++SG+  N L+ N+  +   ER          +  E+K F + 
Sbjct: 59  MQNIMNDMPIYMYSVCNVMSGDQDNWLRTNWVYRGEAER----------IFIELK-FTVR 107

Query: 205 DMATHPIADASCKEAI 220
           D  + P   +SCKE  
Sbjct: 108 DCNSFPGGASSCKETF 123


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

4TU3-A nrPDB                                                          602   e-173
2ZII-A nrPDB                                                          491   e-139
3KN1-A nrPDB                                                          355   1e-98

Sequences not found previously or not previously below threshold:

5I3E-A nrPDB                                                           33   0.27 
3K1N-A nrPDB                                                           31   0.70 
3BHG-A nrPDB                                                           31   0.82 
1QHM-A nrPDB                                                           30   1.3  
1H18-A nrPDB                                                           30   1.3  
4F52-A nrPDB                                                           30   1.5  
4KFN-A nrPDB                                                           30   1.9  
1U6G-A nrPDB                                                           30   2.0  
3RTR-A nrPDB                                                           30   2.1  
2Q14-A nrPDB                                                           29   3.3  
2VZM-A nrPDB                                                           28   7.2  
5MDN-A nrPDB                                                           28   8.4  
2Z04-A nrPDB                                                           27   9.9  


CONVERGED!
>4TU3-A nrPDB
          Length = 345

 Score =  602 bits (1553), Expect = e-173,   Method: Composition-based stats.
 Identities = 345/345 (100%), Positives = 345/345 (100%)

Query: 1   MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRD 60
           MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRD
Sbjct: 1   MSTLQRRRVNRADSGDTSSIHSSANNTKGDKIANIAVDGDDDNGTNKKIAYDPEESKLRD 60

Query: 61  NINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKR 120
           NINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKR
Sbjct: 61  NINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKR 120

Query: 121 FDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQV 180
           FDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQV
Sbjct: 121 FDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQV 180

Query: 181 RERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEY 240
           RERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEY
Sbjct: 181 RERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEY 240

Query: 241 FPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEK 300
           FPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEK
Sbjct: 241 FPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEK 300

Query: 301 ETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 345
           ETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL
Sbjct: 301 ETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 345


>2ZII-A nrPDB
          Length = 288

 Score =  491 bits (1264), Expect = e-139,   Method: Composition-based stats.
 Identities = 286/286 (100%), Positives = 286/286 (100%)

Query: 60  DNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARK 119
           DNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARK
Sbjct: 3   DNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARK 62

Query: 120 RFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ 179
           RFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ
Sbjct: 63  RFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNLLKINYQLKQ 122

Query: 180 VRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNE 239
           VRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNE
Sbjct: 123 VRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNE 182

Query: 240 YFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLE 299
           YFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLE
Sbjct: 183 YFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLE 242

Query: 300 KETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 345
           KETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL
Sbjct: 243 KETELGVSVNLNKEVKEEIENNPGHDLQLEVIAGVFEVFSRMDMLL 288


>3KN1-A nrPDB
          Length = 249

 Score =  355 bits (912), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 109/238 (45%), Positives = 155/238 (65%), Gaps = 19/238 (7%)

Query: 67  LTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKIRILDDSARKRFDLSER 126
           LTLMEEVLL+GL+DREGY SFWND IS  LRGC++IELALRG++++     R++  L+ +
Sbjct: 11  LTLMEEVLLLGLKDREGYTSFWNDCISSGLRGCMLIELALRGRLQLEACGMRRKSLLTRK 70

Query: 127 LIEVIDSSKTGEVLLDETLQLMKNDEPL-SISNWIDLLSGETWNLLKINYQLKQVRERLA 185
           +I   D+  TG+VLLDE L+ +K  +P  ++ NWI+LLSGETWN LK++YQL+ VRERLA
Sbjct: 71  VICKSDAP-TGDVLLDEALKHVKETQPPETVQNWIELLSGETWNPLKLHYQLRNVRERLA 129

Query: 186 KGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLVSRNMELSYNEYFPETT 245
           K LV+KGVL TE +NF LFDM THP+ + + K+ + ++V         E   +++  +  
Sbjct: 130 KNLVEKGVLTTEKQNFLLFDMTTHPLTNNNIKQRLIKKV--------QEAVLDKWVNDPH 181

Query: 246 SFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDLEKETE 303
                R LALI  ++ ++VLEN    L  E+ D A  R  +++        DL+ E E
Sbjct: 182 RMD-RRLLALIYLAHASDVLENAFAPLLDEQYDLATKRVRQLL--------DLDPEVE 230


>5I3E-A nrPDB
          Length = 358

 Score = 32.7 bits (73), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 79  RDREGYLSFWNDSISYALRGCIIIELALRGKIR--ILDDSARKRFDLSERLIEVIDSS 134
           ++R+    FWND +   L+  + +E  +RGKI   +  D   K +D+    +  + + 
Sbjct: 221 KNRKWGKDFWNDLVGPTLKADMYVETWIRGKIPPVLDSDGVHKTYDIKFIDLRKLGAP 278


>3K1N-A nrPDB
          Length = 312

 Score = 31.2 bits (69), Expect = 0.70,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 20/122 (16%)

Query: 108 GKIRILDDSARKRFDLSERLIEVIDSSKTGEV----------LLDETLQLMKNDEPLSIS 157
           G+++I D + ++    +ERL+  + +S               L+DE + L  +    + S
Sbjct: 145 GRLKISDPAIKRTLLRNERLMVAVHASHPLNQMKDKGVHLNDLIDEKILLYPSSPKPNFS 204

Query: 158 NWI-DLLSGETWNLLKINYQLKQVRE-RLAKGLVDKG----VLRTEMKNFFLFDMATHPI 211
             + ++ S       KIN    +VRE +LA GLV  G    ++    ++  LF+++  P+
Sbjct: 205 THVMNIFSDHGLEPTKIN----EVREVQLALGLVAAGEGISLVPASTQSIQLFNLSYVPL 260

Query: 212 AD 213
            D
Sbjct: 261 LD 262


>3BHG-A nrPDB
          Length = 459

 Score = 30.8 bits (68), Expect = 0.82,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 59/150 (39%), Gaps = 20/150 (13%)

Query: 169 NLLKINYQLKQVRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVL 228
           N L I++  K  + R+ + L D  VLR     F    +A H +A  + K  I +  L   
Sbjct: 321 NALFIHFANKLTQSRMQRDLSDSTVLRNLGVAFSYSLIAYHSVAKGNDKLQINKSALQKD 380

Query: 229 VSRNMELSYN------EYFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAIS 282
           +S N E+           + E  +++ ++ L         N+          +K  K +S
Sbjct: 381 LSENWEVLAEAIQTVMRRYNEPNAYEQLKELTRGQMIDAENL----------KKFIKTLS 430

Query: 283 RAEEIMAQFSQYPFDLEKETELGVSVNLNK 312
             EE  A+  +    L  ET  G++  L K
Sbjct: 431 IPEEAKAELMK----LTPETYTGLATQLVK 456


>1QHM-A nrPDB
          Length = 624

 Score = 30.4 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 13/103 (12%)

Query: 220 IKRRVLSVLVSRNMELSYNEYFPETTSFKIIRTLALICGSYG-----ANVLENVLTTLEY 274
           + +++ +     + +  ++ Y P+    +    L  +  +YG      +     L  ++Y
Sbjct: 132 MIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDY 191

Query: 275 EKRDKAISRAEEIMAQFSQYPFDLEKETELGVSVNLNKEVKEE 317
             +DK        +AQF+    DLE    L  ++ L +E+ E+
Sbjct: 192 LMKDK--------LAQFTSLQADLENGVNLEQTIRLREEIAEQ 226


>1H18-A nrPDB
          Length = 759

 Score = 30.4 bits (67), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 43/103 (41%), Gaps = 13/103 (12%)

Query: 220 IKRRVLSVLVSRNMELSYNEYFPETTSFKIIRTLALICGSYG-----ANVLENVLTTLEY 274
           + +++ +     + +  ++ Y P+    +    L  +  +YG      +     L  ++Y
Sbjct: 132 MIKKIFTEYRKTHNQGVFDVYTPDILRCRKSGVLTGLPDAYGRGRIIGDYRRVALYGIDY 191

Query: 275 EKRDKAISRAEEIMAQFSQYPFDLEKETELGVSVNLNKEVKEE 317
             +DK        +AQF+    DLE    L  ++ L +E+ E+
Sbjct: 192 LMKDK--------LAQFTSLQADLENGVNLEQTIRLREEIAEQ 226


>4F52-A nrPDB
          Length = 282

 Score = 30.0 bits (66), Expect = 1.5,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 47  KKIAYDPEESKLRDNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYAL----RGCIII 102
           KK + +PEE++L D +N     +ME+     + D++ +  F+   ++  L          
Sbjct: 23  KKSSKNPEEAELEDTLN----QVMEK--FKKIEDKDVFQKFYAKMLAKRLVHQNSASDDA 76

Query: 103 ELALRGKIRILDDSARKRFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDL 162
           E ++  K++           L +R+ + I  SK    L ++  + + N EPL +   I +
Sbjct: 77  EASMISKLK-QACGFEYTSKL-QRMFQDIGVSKD---LNEQFKKHLTNSEPLDLDFSIQV 131

Query: 163 LSGETW 168
           LS  +W
Sbjct: 132 LSSGSW 137


>4KFN-A nrPDB
          Length = 501

 Score = 29.6 bits (65), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 27/45 (60%), Gaps = 2/45 (4%)

Query: 148 MKNDEPLS--ISNWIDLLSGETWNLLKINYQLKQVRERLAKGLVD 190
           ++N +P    ++NWI+ +  ++W  + +    ++ ++ LAK L++
Sbjct: 134 VENTDPECYWLTNWIETILVQSWYPITVATNSREQKKILAKYLLE 178


>1U6G-A nrPDB
          Length = 776

 Score = 29.6 bits (65), Expect = 2.0,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 47  KKIAYDPEESKLRDNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYAL----RGCIII 102
           KK + +PEE++L D +N     +M  V+   + D++ +  F+   ++  L          
Sbjct: 431 KKSSKNPEEAELEDTLN----QVM--VVFKYIEDKDVFQKFYAKMLAKRLVHQNSASDDA 484

Query: 103 ELALRGKIRILDDSARKRFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDL 162
           E ++  K++           L +R+ + I  SK    L ++  + + N EPL +   I +
Sbjct: 485 EASMISKLK-QACGFEYTSKL-QRMFQDIGVSKD---LNEQFKKHLTNSEPLDLDFSIQV 539

Query: 163 LSGETW 168
           LS  +W
Sbjct: 540 LSSGSW 545


>3RTR-A nrPDB
          Length = 368

 Score = 29.6 bits (65), Expect = 2.1,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 15/126 (11%)

Query: 47  KKIAYDPEESKLRDNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYAL----RGCIII 102
           KK + +PEE++L D +N     +ME+     + D++ +  F+   ++  L          
Sbjct: 23  KKSSKNPEEAELEDTLN----QVMEK--FKKIEDKDVFQKFYAKMLAKRLVHQNSASDDA 76

Query: 103 ELALRGKIRILDDSARKRFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDL 162
           E ++  K++           L +R+ + I  SK    L ++  + + N EPL +   I +
Sbjct: 77  EASMISKLK-QACGFEYTSKL-QRMFQDIGVSKD---LNEQFKKHLTNSEPLDLDFSIQV 131

Query: 163 LSGETW 168
           LS  +W
Sbjct: 132 LSSGSW 137


>2Q14-A nrPDB
          Length = 410

 Score = 28.9 bits (63), Expect = 3.3,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 73/187 (39%), Gaps = 20/187 (10%)

Query: 111 RILDDSARKRFDLSERLIEVIDSSKTGEVLLDETLQLMKNDEPLSISNWIDLLSGETWNL 170
           R+L  +  +  +L+ + +E+  S      L ++      ++ P  + N+I L   + W  
Sbjct: 233 RMLISTLLRAKELASQGVELFASPALHFFLYNDINHTEFHNNPDCLENFIQLDDNDIWTA 292

Query: 171 LKI-NYQLKQVRERLAKGLVDKGVLRTEMKNFFLFDMATHPIADASCKEAIKRRVLSVLV 229
           LK+ +    +V   L+ G++++ + + E         +  PI +   KE +  ++   L 
Sbjct: 293 LKVWSNHPDKVLSTLSLGMINRNIFKVEN--------SAEPIGEDRIKE-LTLQISQQLG 343

Query: 230 SRNMELSY---------NEYFPETTSFKIIRTLALI-CGSYGANVLENVLTTLEYEKRDK 279
               E +Y         N Y P   S  II     I   +  +++L   L + + +K   
Sbjct: 344 ITLSEANYFVSTPSIEKNMYDPADDSIDIIYKDGTIKNIAEASDMLNISLLSKKVKKYYL 403

Query: 280 AISRAEE 286
              R   
Sbjct: 404 CYQRLHR 410


>2VZM-A nrPDB
          Length = 436

 Score = 27.7 bits (60), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 22/62 (35%), Gaps = 4/62 (6%)

Query: 239 EYFPETTSFKIIRTLALICGSYGANVLENVLTTLEYEKRDKAISRAEEIMAQFSQYPFDL 298
           E FP+   F I R  A    ++G  +   +   L    R +A      ++ +      D+
Sbjct: 347 ERFPDPHRFDIRRDTAG-HLAFGHGIHFCIGAPL---ARLEARIAVRALLERCPDLALDV 402

Query: 299 EK 300
             
Sbjct: 403 SP 404


>5MDN-A nrPDB
          Length = 783

 Score = 27.7 bits (60), Expect = 8.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 275 EKRDKAISRAEEIMAQFSQYPFDLEKETELGVSVNLNKEVKEEIENNPGHDLQLEV 330
           E R++ +    E++ +   Y FDL+   +L +   L+KE+ E     P     LE+
Sbjct: 649 EARERVVKYVREVVERLKAYKFDLD---DLIIWKTLDKELDEYKAYGPHVHAALEL 701


>2Z04-A nrPDB
          Length = 365

 Score = 27.3 bits (59), Expect = 9.9,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 21/111 (18%)

Query: 51  YDPEESKLRDNINIPTLTLMEEVLLMGLRDREGYLSFWNDSISYALRGCIIIELALRGKI 110
           +D EES + +      +    E+  +G+RDREG   F+    +    G +I       K+
Sbjct: 159 HDKEESFIIEEF----VKFEAEISCIGVRDREGKTYFYPQPFNKHEEGILIYNYVPYAKL 214

Query: 111 RILDDSARKRFDLSERLIEVIDSS----------KTGEVLLDETLQLMKND 151
                  ++  ++++RL+E++D            K G VL++E    + N 
Sbjct: 215 -------KEAEEITKRLMELLDIVGVFTVEFFLLKDGRVLINEFAPRVHNT 258


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.316    0.134    0.367 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,932,268
Number of Sequences: 36641
Number of extensions: 516161
Number of successful extensions: 1528
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1507
Number of HSP's gapped (non-prelim): 41
length of query: 345
length of database: 10,336,785
effective HSP length: 98
effective length of query: 247
effective length of database: 6,745,967
effective search space: 1666253849
effective search space used: 1666253849
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)