BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q06151 (350 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5BV3-A nrPDB 708 0.0 1XMM-B nrPDB 145 2e-35 5OSY-A nrPDB 145 3e-35 1VLR-A nrPDB 144 6e-35 6E2O-A nrPDB 31 0.90 3FQD-A nrPDB 30 2.2 4H5L-A nrPDB 29 2.7 >5BV3-A nrPDB Length = 345 Score = 708 bits (1828), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/343 (99%), Positives = 343/343 (100%) Query: 8 FASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 FASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRRPSQDGRSTP Sbjct: 3 FASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRRPSQDGRSTP 62 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 127 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY Sbjct: 63 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 122 Query: 128 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 187 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD Sbjct: 123 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 182 Query: 188 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 247 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY Sbjct: 183 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 242 Query: 248 AVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 307 AVHPDELRILVHYQPSYYHF+IHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM Sbjct: 243 AVHPDELRILVHYQPSYYHFNIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 302 Query: 308 NKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK 350 NKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK Sbjct: 303 NKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK 345 >1XMM-B nrPDB Length = 342 Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 97/317 (30%), Positives = 164/317 (51%), Gaps = 42/317 (13%) Query: 15 FQFVSVLDSNPQTKVMSLLGTI-------DNKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 F+ VL + + K++ L G + D +DA++ EKT F ++ + Sbjct: 52 FRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ---------- 101 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYY-WGLSVIKQDMESNPTAKLNLIWPATPIHIKK 126 + G EL+ SNDIY + L +Q + K +++PAT H++K Sbjct: 102 ----------LLTGSPELQLQFSNDIYSTYHLFPPRQLND----VKTTVVYPATEKHLQK 147 Query: 127 YEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKD 186 Y +Q+ L+RET + Y+ I P++E + ++WV NIL + AE++R+V F + Sbjct: 148 YLRQDLRLIRETGDDYRNITLPHLESQSLS--IQWVYNILDKKAEADRIV---FENPDPS 202 Query: 187 DGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYN 246 DGF+++PD+KW+ LD LYL+AI +R I+++RDL L N+ ++ + + Sbjct: 203 DGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAI--LQR 260 Query: 247 YAVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGY 306 Y + D LR+ +HY PSYYH H+H + G+ + +A LL ++IE L P Y Sbjct: 261 YRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAEVIENLE-CDPRHY 317 Query: 307 MNKTITYAIGENHDLWK 323 +T+T+A+ + L K Sbjct: 318 QQRTLTFALRADDPLLK 334 >5OSY-A nrPDB Length = 301 Score = 145 bits (366), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 162/317 (51%), Gaps = 42/317 (13%) Query: 15 FQFVSVLDSNPQTKVMSLLGTI-------DNKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 F+ VL + + K++ L G + D +DA++ EKT F Sbjct: 11 FRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPF----------------- 53 Query: 68 VLYNCENEYSCINGIQELKEITSNDIY-YWGLSVIKQDMESNPTAKLNLIWPATPIHIKK 126 E + G EL+ SNDIY + L +Q + K +++PAT H++K Sbjct: 54 ---QVEQVAQLLTGSPELQLQFSNDIYSTYHLFPPRQLND----VKTTVVYPATEKHLQK 106 Query: 127 YEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKD 186 Y +Q+ L+RET + Y+ I P++E + ++WV NIL + AE++R+V F + Sbjct: 107 YLRQDLRLIRETGDDYRNITLPHLESQSLS--IQWVYNILDKKAEADRIV---FENPDPS 161 Query: 187 DGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYN 246 DGF+++PD+KW+ LD LYL+AI +R I+++RDL L N+ ++ + + Sbjct: 162 DGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAI--LQR 219 Query: 247 YAVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGY 306 Y + D LR+ +HY PSYYH H+H + G+ + +A LL ++IE L P Y Sbjct: 220 YRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAEVIENLE-CDPRHY 276 Query: 307 MNKTITYAIGENHDLWK 323 +T+T+A+ + L K Sbjct: 277 QQRTLTFALRADDPLLK 293 >1VLR-A nrPDB Length = 350 Score = 144 bits (363), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 96/308 (31%), Positives = 156/308 (50%), Gaps = 40/308 (12%) Query: 15 FQFVSVLDSNPQTKVMSLLGTID-------NKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 F+ VL + + K++ L G ++ +DA++ EKT F Sbjct: 58 FRVQKVLRESARDKIIFLHGKVNEDSGDTHGEDAVVILEKTPF----------------- 100 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 127 E+ + G ELK SNDIY + + K +++PAT H++KY Sbjct: 101 ---QVEHVAQLLTGSPELKLQFSNDIYSTYNLFPPRHLSD---IKTTVVYPATEKHLQKY 154 Query: 128 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 187 +Q+ L+RET + Y+ I PY+E + ++WV NIL + AE++R+V F + D Sbjct: 155 MRQDLRLIRETGDDYRTITLPYLESQSLS--IQWVYNILDKKAEADRIV---FENPDPSD 209 Query: 188 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 247 GF+++PD+KW+ LD LYL+AI +R I+++RDL L N+ + + + Y Sbjct: 210 GFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAI--LKRY 267 Query: 248 AVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 307 V D LR+ +HY PSYYH H+H + G+ + +A LL +IE L P+ Y Sbjct: 268 QVTGDRLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAQVIENLE-CDPKHYQ 324 Query: 308 NKTITYAI 315 +T+T+A+ Sbjct: 325 QRTLTFAL 332 >6E2O-A nrPDB Length = 295 Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust. Identities = 21/63 (33%), Positives = 28/63 (44%) Query: 135 VRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDDGFLILPD 194 ++E PE R QP EE+ + LK N + Y G+ SE K F E+ L Sbjct: 52 IKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 111 Query: 195 MKW 197 KW Sbjct: 112 SKW 114 >3FQD-A nrPDB Length = 899 Score = 29.6 bits (65), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 6/52 (11%) Query: 121 PIHIKKYEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAES 172 P + ++Y +Q FH+ + PE + V+ Y+ +C WV Y+G S Sbjct: 592 PGYRERYYEQKFHISPDEPEKIREAVKHYVHGLC------WVLLYYYQGCPS 637 >4H5L-A nrPDB Length = 253 Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust. Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 140 EMYKRIVQPYIEEMCNNGRL-KWVNNILYEGAESERVV 176 E Y+ I +++E ++G + WVN Y+G + +R+V Sbjct: 4 ENYRDIALAFLDESADSGTINAWVNEFAYQGFDPKRIV 41 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5BV3-A nrPDB 589 e-169 1XMM-B nrPDB 405 e-113 1VLR-A nrPDB 399 e-112 5OSY-A nrPDB 399 e-111 Sequences not found previously or not previously below threshold: 4H5L-A nrPDB 32 0.36 4J4X-A nrPDB 32 0.53 5SUP-A nrPDB 30 1.2 5SUQ-A nrPDB 30 1.3 1SNL-A nrPDB 30 1.6 6E2O-A nrPDB 29 2.6 3EWB-X nrPDB 29 2.6 1XTI-A nrPDB 29 4.6 3J4J-A nrPDB 29 4.8 5OY5-A nrPDB 28 6.2 4GW9-A nrPDB 28 6.2 4B44-A nrPDB 28 6.3 4KJZ-A nrPDB 28 6.4 CONVERGED! >5BV3-A nrPDB Length = 345 Score = 589 bits (1519), Expect = e-169, Method: Composition-based stats. Identities = 342/343 (99%), Positives = 343/343 (100%) Query: 8 FASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 FASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRRPSQDGRSTP Sbjct: 3 FASLIKRFQFVSVLDSNPQTKVMSLLGTIDNKDAIITAEKTHFLFDETVRRPSQDGRSTP 62 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 127 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY Sbjct: 63 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 122 Query: 128 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 187 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD Sbjct: 123 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 182 Query: 188 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 247 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY Sbjct: 183 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 242 Query: 248 AVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 307 AVHPDELRILVHYQPSYYHF+IHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM Sbjct: 243 AVHPDELRILVHYQPSYYHFNIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 302 Query: 308 NKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK 350 NKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK Sbjct: 303 NKTITYAIGENHDLWKRGLEEELTKQLERDGIPKIPKIVNGFK 345 >1XMM-B nrPDB Length = 342 Score = 405 bits (1041), Expect = e-113, Method: Composition-based stats. Identities = 97/317 (30%), Positives = 164/317 (51%), Gaps = 42/317 (13%) Query: 15 FQFVSVLDSNPQTKVMSLLGTI-------DNKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 F+ VL + + K++ L G + D +DA++ EKT F ++ + Sbjct: 52 FRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ---------- 101 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYY-WGLSVIKQDMESNPTAKLNLIWPATPIHIKK 126 + G EL+ SNDIY + L +Q + K +++PAT H++K Sbjct: 102 ----------LLTGSPELQLQFSNDIYSTYHLFPPRQLND----VKTTVVYPATEKHLQK 147 Query: 127 YEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKD 186 Y +Q+ L+RET + Y+ I P++E + ++WV NIL + AE++R+V F + Sbjct: 148 YLRQDLRLIRETGDDYRNITLPHLESQSLS--IQWVYNILDKKAEADRIV---FENPDPS 202 Query: 187 DGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYN 246 DGF+++PD+KW+ LD LYL+AI +R I+++RDL L N+ ++ + + Sbjct: 203 DGFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAI--LQR 260 Query: 247 YAVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGY 306 Y + D LR+ +HY PSYYH H+H + G+ + +A LL ++IE L P Y Sbjct: 261 YRMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAEVIENLE-CDPRHY 317 Query: 307 MNKTITYAIGENHDLWK 323 +T+T+A+ + L K Sbjct: 318 QQRTLTFALRADDPLLK 334 >1VLR-A nrPDB Length = 350 Score = 399 bits (1026), Expect = e-112, Method: Composition-based stats. Identities = 96/313 (30%), Positives = 157/313 (50%), Gaps = 40/313 (12%) Query: 15 FQFVSVLDSNPQTKVMSLLGTID-------NKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 F+ VL + + K++ L G ++ +DA++ EKT F Sbjct: 58 FRVQKVLRESARDKIIFLHGKVNEDSGDTHGEDAVVILEKTPF----------------- 100 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 127 E+ + G ELK SNDIY + + K +++PAT H++KY Sbjct: 101 ---QVEHVAQLLTGSPELKLQFSNDIYSTYNLFPPRHLSD---IKTTVVYPATEKHLQKY 154 Query: 128 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 187 +Q+ L+RET + Y+ I PY+E + ++WV NIL + AE++R+V F + D Sbjct: 155 MRQDLRLIRETGDDYRTITLPYLESQSLS--IQWVYNILDKKAEADRIV---FENPDPSD 209 Query: 188 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 247 GF+++PD+KW+ LD LYL+AI +R I+++RDL L N+ + + + Y Sbjct: 210 GFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILREGQEAI--LKRY 267 Query: 248 AVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 307 V D LR+ +HY PSYYH H+H + G+ + +A LL +IE L P+ Y Sbjct: 268 QVTGDRLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAQVIENLE-CDPKHYQ 324 Query: 308 NKTITYAIGENHD 320 +T+T+A+ + Sbjct: 325 QRTLTFALRTDDP 337 >5OSY-A nrPDB Length = 301 Score = 399 bits (1024), Expect = e-111, Method: Composition-based stats. Identities = 95/316 (30%), Positives = 161/316 (50%), Gaps = 40/316 (12%) Query: 15 FQFVSVLDSNPQTKVMSLLGTI-------DNKDAIITAEKTHFLFDETVRRPSQDGRSTP 67 F+ VL + + K++ L G + D +DA++ EKT F ++ + Sbjct: 11 FRLQKVLRESARDKIIFLHGKVNEASGDGDGEDAVVILEKTPFQVEQVAQ---------- 60 Query: 68 VLYNCENEYSCINGIQELKEITSNDIYYWGLSVIKQDMESNPTAKLNLIWPATPIHIKKY 127 + G EL+ SNDIY + + K +++PAT H++KY Sbjct: 61 ----------LLTGSPELQLQFSNDIYSTYHLFPPRQLND---VKTTVVYPATEKHLQKY 107 Query: 128 EQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDD 187 +Q+ L+RET + Y+ I P++E + ++WV NIL + AE++R+V F + D Sbjct: 108 LRQDLRLIRETGDDYRNITLPHLESQSLS--IQWVYNILDKKAEADRIV---FENPDPSD 162 Query: 188 GFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNY 247 GF+++PD+KW+ LD LYL+AI +R I+++RDL L N+ ++ + + Y Sbjct: 163 GFVLIPDLKWNQQQLDDLYLIAICHRRGIRSLRDLTPEHLPLLRNILHQGQEAI--LQRY 220 Query: 248 AVHPDELRILVHYQPSYYHFHIHIVNIKHPGLGNSIAAGKAILLEDIIEMLNYLGPEGYM 307 + D LR+ +HY PSYYH H+H + G+ + +A LL ++IE L P Y Sbjct: 221 RMKGDHLRVYLHYLPSYYHLHVHFTALGFEAPGSGVE--RAHLLAEVIENLE-CDPRHYQ 277 Query: 308 NKTITYAIGENHDLWK 323 +T+T+A+ + L K Sbjct: 278 QRTLTFALRADDPLLK 293 >4H5L-A nrPDB Length = 253 Score = 32.0 bits (71), Expect = 0.36, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Query: 140 EMYKRIVQPYIEEMCNNGRLK-WVNNILYEGAESERVV 176 E Y+ I +++E ++G + WVN Y+G + +R+V Sbjct: 4 ENYRDIALAFLDESADSGTINAWVNEFAYQGFDPKRIV 41 >4J4X-A nrPDB Length = 257 Score = 31.6 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 22/38 (57%), Gaps = 1/38 (2%) Query: 140 EMYKRIVQPYIEEMCNNGRLK-WVNNILYEGAESERVV 176 + Y+ I +++E ++ + WVN Y+G + +R+V Sbjct: 7 DNYRTIALAFLDESADSTTINAWVNEFAYQGFDPKRIV 44 >5SUP-A nrPDB Length = 390 Score = 30.4 bits (67), Expect = 1.2, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 213 RTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNYAVHP------DELRILVHYQPSYY 265 R D++ I D+Q ++ + I P C + +P DE ++ +H YY Sbjct: 171 RRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYY 229 >5SUQ-A nrPDB Length = 446 Score = 30.4 bits (67), Expect = 1.3, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 213 RTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNYAVHP------DELRILVHYQPSYY 265 R D++ I D+Q ++ + I P C + +P DE ++ +H YY Sbjct: 227 RRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYY 285 >1SNL-A nrPDB Length = 103 Score = 30.0 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 288 AILLEDIIEMLNYLGPEGYMNKT--ITYAIGENHDLWKRGLEEELTKQLERDGIPK 341 + +L+++ E L+ L P + KT I + I + L ++ LE TK+LE+ PK Sbjct: 2 SHMLKEVWEELDGLDPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPK 57 >6E2O-A nrPDB Length = 295 Score = 29.3 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 6/97 (6%) Query: 135 VRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYKDFSEENKDDGFLILPD 194 ++E PE R QP EE+ + LK N + Y G+ SE K F E+ L Sbjct: 52 IKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLR 111 Query: 195 MKW----DGMNLDSLYLVAIVYRTDIKTIRDLRYSDR 227 KW D Y I+ +K + D + R Sbjct: 112 SKWGPLKDNEQTIGFYTKQIL--EGLKYLHDNQIVHR 146 >3EWB-X nrPDB Length = 293 Score = 29.3 bits (64), Expect = 2.6, Method: Composition-based stats. Identities = 23/156 (14%), Positives = 57/156 (36%), Gaps = 15/156 (9%) Query: 119 ATPIHIKKYEQQNFHLVRETPEMYKRIVQPYIEEMCNNGRLKWVNNILYEGAESERVVYK 178 A+ H Y +Q F +V+ +PE R + ++ ++ V + GA + Sbjct: 121 ASIKHHISYARQKFDVVQFSPEDATRSDRAFL--------IEAVQTAIDAGATVINI-PD 171 Query: 179 DFSEENKDDGFLILPDMKWDGMNLDSLYLVAIVYRTDIKTIRDLRYSDRQWLINLNNKIR 238 N + + D++ + D + + + + + + N ++ Sbjct: 172 TVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCH----DDLGMATANALAAIENGARRVE 227 Query: 239 SIVPGCYNYAVHP--DELRILVHYQPSYYHFHIHIV 272 + G A + +E+ + +H + +Y +IV Sbjct: 228 GTINGIGERAGNTALEEVAVALHIRKDFYQAETNIV 263 >1XTI-A nrPDB Length = 391 Score = 28.5 bits (62), Expect = 4.6, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 213 RTDIKTIRDLRYSDRQWLINLNNKIRSIVPGCYNYAVHP------DELRILVHYQPSYY 265 R D++ I + ++Q ++ + I P C + P DE ++ +H YY Sbjct: 171 RRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYY 229 >3J4J-A nrPDB Length = 569 Score = 28.5 bits (62), Expect = 4.8, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 296 EMLNYLGPEGYMNKTITYAIGENH-----DLWK--RGLEEELTKQLERDGIPKIPKIV 346 E+L L G K+ + E +L K RGL+E+L ++ R +P+ P +V Sbjct: 19 ELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVV 76 >5OY5-A nrPDB Length = 525 Score = 28.1 bits (61), Expect = 6.2, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 13/124 (10%) Query: 219 IRDLRYSDRQWLINLNNKIRSIVPGCYNYAVHPDELRILVHYQPSYYHFHIH-IVNIKHP 277 +R + Q+L N+ + +V + L HY P + HF + I + Sbjct: 267 LRSMSPIHLQYLKNMGVRATLVVSLVVGGKLWG--LVACHHYLPRFIHFELRAICELLAE 324 Query: 278 GLGNSIAAGKAILLEDIIEMLNYLGPEGYMNKTITYAIGENHDLWKRGL---EEELTKQL 334 + I A LE + + L + + I E W+ + + + + L Sbjct: 325 AIATRITA-----LESFAQSQSELFVQRLEQRMIEAITREGD--WRAAIFDTSQSILQPL 377 Query: 335 ERDG 338 DG Sbjct: 378 HADG 381 >4GW9-A nrPDB Length = 655 Score = 28.1 bits (61), Expect = 6.2, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 43/124 (34%), Gaps = 13/124 (10%) Query: 219 IRDLRYSDRQWLINLNNKIRSIVPGCYNYAVHPDELRILVHYQPSYYHFHIH-IVNIKHP 277 +R + Q+L N+ + +V + L HY P + HF + I + Sbjct: 267 LRSMSPIHLQYLKNMGVRATLVVSLVVGGKLWG--LVACHHYLPRFIHFELRAICELLAE 324 Query: 278 GLGNSIAAGKAILLEDIIEMLNYLGPEGYMNKTITYAIGENHDLWKRGL---EEELTKQL 334 + I A LE + + L + + I E W+ + + + + L Sbjct: 325 AIATRITA-----LESFAQSQSELFVQRLEQRMIEAITREGD--WRAAIFDTSQSILQPL 377 Query: 335 ERDG 338 DG Sbjct: 378 HADG 381 >4B44-A nrPDB Length = 363 Score = 28.1 bits (61), Expect = 6.3, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 296 EMLNYLGPEGYMNKTITYAIGENH-----DLWK--RGLEEELTKQLERDGIPKIPKIV 346 E+L L G K+ + E +L K RGL+E+L ++ R +P+ P +V Sbjct: 19 ELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVV 76 >4KJZ-A nrPDB Length = 473 Score = 28.1 bits (61), Expect = 6.4, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 7/58 (12%) Query: 296 EMLNYLGPEGYMNKTITYAIGENH-----DLWK--RGLEEELTKQLERDGIPKIPKIV 346 E+L L G K+ + E +L K RGL+E+L ++ R +P+ P +V Sbjct: 18 ELLELLDQMGVAYKSHASTLEEKDAEAVRELVKEQRGLQEKLAEEERRKSLPRRPPVV 75 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.133 0.367 Lambda K H 0.267 0.0407 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,237,449 Number of Sequences: 36641 Number of extensions: 588985 Number of successful extensions: 1609 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 20 Number of HSP's that attempted gapping in prelim test: 1558 Number of HSP's gapped (non-prelim): 33 length of query: 350 length of database: 10,336,785 effective HSP length: 98 effective length of query: 252 effective length of database: 6,745,967 effective search space: 1699983684 effective search space used: 1699983684 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.3 bits)