BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q06138 (341 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3GNI-A nrPDB 695 0.0 4KZG-A nrPDB 610 e-175 3ZHP-A nrPDB 552 e-157 5UJU-A nrPDB 32 0.33 4B8J-A nrPDB 29 3.2 4B8O-A nrPDB 29 3.3 4DVY-P nrPDB 28 8.2 >3GNI-A nrPDB Length = 341 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/341 (99%), Positives = 338/341 (99%) Query: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60 Query: 61 EPQTEAVAQLAQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120 EPQTEAVAQLAQELYNSGLL TLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI Sbjct: 61 EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120 Query: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI Sbjct: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180 Query: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR Sbjct: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240 Query: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQT 300 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQ Sbjct: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300 Query: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRAAQQEA 341 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKR AQQEA Sbjct: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341 >4KZG-A nrPDB Length = 327 Score = 610 bits (1572), Expect = e-175, Method: Compositional matrix adjust. Identities = 304/324 (93%), Positives = 318/324 (98%) Query: 11 SPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQL 70 +PADIVKNLK++M +LEKQDISDKKAEKA+EEVSK+L++MKEILYGTNEKEPQTEAVAQL Sbjct: 4 APADIVKNLKDNMTILEKQDISDKKAEKASEEVSKSLLSMKEILYGTNEKEPQTEAVAQL 63 Query: 71 AQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFML 130 AQELYNSGLL TLVADLQLIDFEGKKDVAQIFN+ILRRQIGTRTPTVEY+CTQQNILFML Sbjct: 64 AQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNDILRRQIGTRTPTVEYLCTQQNILFML 123 Query: 131 LKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKD 190 LKGYESP+IALNCGIMLRECIRHEPLAKI L SEQFYDFFRYVEMSTFDIASDAFATFKD Sbjct: 124 LKGYESPDIALNCGIMLRECIRHEPLAKITLCSEQFYDFFRYVEMSTFDIASDAFATFKD 183 Query: 191 LLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYI 250 LLTRHK+LSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYI Sbjct: 184 LLTRHKVLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYI 243 Query: 251 SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIEFLSKFQ 310 SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKT PILDILLKNQTKLIEFLSKFQ Sbjct: 244 SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTPPILDILLKNQTKLIEFLSKFQ 303 Query: 311 NDRTEDEQFNDEKTYLVKQIRDLK 334 NDR EDEQF+DEKTYL+KQIRDLK Sbjct: 304 NDRAEDEQFSDEKTYLIKQIRDLK 327 >3ZHP-A nrPDB Length = 340 Score = 552 bits (1422), Expect = e-157, Method: Compositional matrix adjust. Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%) Query: 5 FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64 F KSHK+PA+IVK LK+++A+LEKQD KK +KA+EEVSK+L AMKEIL GTNEKEP T Sbjct: 10 FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 66 Query: 65 EAVAQLAQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124 EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI Sbjct: 67 EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 126 Query: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184 +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA Sbjct: 127 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 186 Query: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244 FATFKDLLTRHK+L A+FLEQ+YD F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF Sbjct: 187 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 246 Query: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIE 304 IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE Sbjct: 247 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 306 Query: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRAA 337 FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A Sbjct: 307 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 339 >5UJU-A nrPDB Length = 576 Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust. Identities = 22/92 (23%), Positives = 39/92 (42%), Gaps = 10/92 (10%) Query: 256 LKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIEFLSKFQNDRTE 315 L + + + RD R F+ +V + PN + D+ L+ + KLI+F QN Sbjct: 247 LAITVRIARDVLREAGFDP-NVVTLLATEPNDGALVQDLALRPEIKLIDFTGSTQNGTWL 305 Query: 316 DEQFNDEKTY---------LVKQIRDLKRAAQ 338 + + + Y ++ DLK AA+ Sbjct: 306 ERHAHQAQVYTEKAGVNQIVIDSTDDLKAAAK 337 >4B8J-A nrPDB Length = 528 Score = 28.9 bits (63), Expect = 3.2, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Query: 72 QELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRR----QI------GTRTPTVE-YI 120 Q + N+G++G LV LQ +F+ KK+ A +N QI G P + I Sbjct: 365 QAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLI 424 Query: 121 CTQQNILFMLLKGYES 136 C I+ + L+G E+ Sbjct: 425 CPDIRIVTVCLEGLEN 440 >4B8O-A nrPDB Length = 490 Score = 28.9 bits (63), Expect = 3.3, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 11/76 (14%) Query: 72 QELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRR----QI------GTRTPTVE-YI 120 Q + N+G++G LV LQ +F+ KK+ A +N QI G P + I Sbjct: 327 QAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLCDLLI 386 Query: 121 CTQQNILFMLLKGYES 136 C I+ + L+G E+ Sbjct: 387 CPDIRIVTVCLEGLEN 402 >4DVY-P nrPDB Length = 876 Score = 27.7 bits (60), Expect = 8.2, Method: Compositional matrix adjust. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 10/76 (13%) Query: 184 AFATFKDLLTRHKLLSAEFLEQHYDRFFSEY----EKLLHSENYVTKRQSLKLLGELLLD 239 AF + KD T+H L EF +Y +K L E VT + SLK G + +D Sbjct: 450 AFVSKKD--TKHSALITEFNNGDLSYTLKDYGKKADKALDREKNVTLQGSLKHDGVMFVD 507 Query: 240 RHNFTIMTKYISKPEN 255 NF KY + +N Sbjct: 508 YSNF----KYTNASKN 519 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3GNI-A nrPDB 618 e-178 3ZHP-A nrPDB 566 e-162 4KZG-A nrPDB 564 e-161 Sequences not found previously or not previously below threshold: 6ARG-A nrPDB 33 0.21 6G70-A nrPDB 31 1.0 5X55-A nrPDB 29 2.8 5UJU-A nrPDB 29 3.4 4DVY-P nrPDB 28 6.0 4DVZ-A nrPDB 28 6.0 5C05-A nrPDB 28 8.0 CONVERGED! >3GNI-A nrPDB Length = 341 Score = 618 bits (1595), Expect = e-178, Method: Composition-based stats. Identities = 338/341 (99%), Positives = 338/341 (99%) Query: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK Sbjct: 1 MPFPFGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEK 60 Query: 61 EPQTEAVAQLAQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120 EPQTEAVAQLAQELYNSGLL TLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI Sbjct: 61 EPQTEAVAQLAQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYI 120 Query: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI Sbjct: 121 CTQQNILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDI 180 Query: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR Sbjct: 181 ASDAFATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDR 240 Query: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQT 300 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQ Sbjct: 241 HNFTIMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQA 300 Query: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRAAQQEA 341 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKR AQQEA Sbjct: 301 KLIEFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRPAQQEA 341 >3ZHP-A nrPDB Length = 340 Score = 566 bits (1459), Expect = e-162, Method: Composition-based stats. Identities = 271/333 (81%), Positives = 302/333 (90%), Gaps = 3/333 (0%) Query: 5 FGKSHKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQT 64 F KSHK+PA+IVK LK+++A+LEKQD KK +KA+EEVSK+L AMKEIL GTNEKEP T Sbjct: 10 FSKSHKNPAEIVKILKDNLAILEKQD---KKTDKASEEVSKSLQAMKEILCGTNEKEPPT 66 Query: 65 EAVAQLAQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQ 124 EAVAQLAQELY+SGLL TL+ADLQLIDFEGKKDV QIFNNILRRQIGTR+PTVEYI Sbjct: 67 EAVAQLAQELYSSGLLVTLIADLQLIDFEGKKDVTQIFNNILRRQIGTRSPTVEYISAHP 126 Query: 125 NILFMLLKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDA 184 +ILFMLLKGYE+P+IAL CGIMLRECIRHEPLAKIIL+S QF DFF+YVE+STFDIASDA Sbjct: 127 HILFMLLKGYEAPQIALRCGIMLRECIRHEPLAKIILFSNQFRDFFKYVELSTFDIASDA 186 Query: 185 FATFKDLLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFT 244 FATFKDLLTRHK+L A+FLEQ+YD F +YEKLL SENYVTKRQSLKLLGEL+LDRHNF Sbjct: 187 FATFKDLLTRHKVLVADFLEQNYDTIFEDYEKLLQSENYVTKRQSLKLLGELILDRHNFA 246 Query: 245 IMTKYISKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIE 304 IMTKYISKPENLKLMMNLLRDKS NIQFEAFHVFKVFVA+P+KTQPI++ILLKNQ KLIE Sbjct: 247 IMTKYISKPENLKLMMNLLRDKSPNIQFEAFHVFKVFVASPHKTQPIVEILLKNQPKLIE 306 Query: 305 FLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRAA 337 FLS FQ +RT+DEQF DEK YL+KQIRDLK+ A Sbjct: 307 FLSSFQKERTDDEQFADEKNYLIKQIRDLKKTA 339 >4KZG-A nrPDB Length = 327 Score = 564 bits (1454), Expect = e-161, Method: Composition-based stats. Identities = 304/324 (93%), Positives = 318/324 (98%) Query: 11 SPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVAQL 70 +PADIVKNLK++M +LEKQDISDKKAEKA+EEVSK+L++MKEILYGTNEKEPQTEAVAQL Sbjct: 4 APADIVKNLKDNMTILEKQDISDKKAEKASEEVSKSLLSMKEILYGTNEKEPQTEAVAQL 63 Query: 71 AQELYNSGLLGTLVADLQLIDFEGKKDVAQIFNNILRRQIGTRTPTVEYICTQQNILFML 130 AQELYNSGLL TLVADLQLIDFEGKKDVAQIFN+ILRRQIGTRTPTVEY+CTQQNILFML Sbjct: 64 AQELYNSGLLSTLVADLQLIDFEGKKDVAQIFNDILRRQIGTRTPTVEYLCTQQNILFML 123 Query: 131 LKGYESPEIALNCGIMLRECIRHEPLAKIILWSEQFYDFFRYVEMSTFDIASDAFATFKD 190 LKGYESP+IALNCGIMLRECIRHEPLAKI L SEQFYDFFRYVEMSTFDIASDAFATFKD Sbjct: 124 LKGYESPDIALNCGIMLRECIRHEPLAKITLCSEQFYDFFRYVEMSTFDIASDAFATFKD 183 Query: 191 LLTRHKLLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYI 250 LLTRHK+LSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYI Sbjct: 184 LLTRHKVLSAEFLEQHYDRFFSEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTIMTKYI 243 Query: 251 SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIEFLSKFQ 310 SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKT PILDILLKNQTKLIEFLSKFQ Sbjct: 244 SKPENLKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTPPILDILLKNQTKLIEFLSKFQ 303 Query: 311 NDRTEDEQFNDEKTYLVKQIRDLK 334 NDR EDEQF+DEKTYL+KQIRDLK Sbjct: 304 NDRAEDEQFSDEKTYLIKQIRDLK 327 >6ARG-A nrPDB Length = 399 Score = 32.7 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 26/91 (28%), Positives = 41/91 (45%), Gaps = 12/91 (13%) Query: 9 HKSPADIVKNLKESMAVLEKQDISDKKAEKATEEVSKNLVAMKEILYGTNEKEPQTEAVA 68 H+S D +K+ + KQ++ +AE+ ++ + E T EK A Sbjct: 141 HQSLVD--GIMKDGLTDAGKQELMGLQAEECAQDHGFSREQQDEYAIRTYEK-------A 191 Query: 69 QLAQELYNSGLLGTLVADLQLIDFEGKKDVA 99 Q AQ+ +GL +A +QL F GK DV Sbjct: 192 QAAQK---AGLFDEEIAPIQLPGFRGKPDVT 219 >6G70-A nrPDB Length = 670 Score = 30.7 bits (68), Expect = 1.0, Method: Composition-based stats. Identities = 38/139 (27%), Positives = 59/139 (42%), Gaps = 13/139 (9%) Query: 212 SEYEKLLHSENYVTKRQSLKLLGELLLDRHNFTI----------MTKYISK-PENLKLMM 260 E E LL K + + L RH F I + + I K EN KL + Sbjct: 475 EEAEHLLQDAIKNAKSNNESSFYAIKLARHLFKIQKNLPKSRKVLLEAIEKDKENTKLYL 534 Query: 261 NLLR-DKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIEFLSKFQNDRTEDEQF 319 NLL + S +++ ++ F + + PI + +Q K +EFL F +D + Sbjct: 535 NLLEMEYSCDLKQNEENILNCFDKAIHGSLPIKMRITFSQRK-VEFLEDFGSDVNKLLNA 593 Query: 320 NDEKTYLVKQIRDLKRAAQ 338 DE L+K+ LKR A+ Sbjct: 594 YDEHQTLLKEQDTLKRKAE 612 >5X55-A nrPDB Length = 370 Score = 29.2 bits (64), Expect = 2.8, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 17/21 (80%) Query: 158 KIILWSEQFYDFFRYVEMSTF 178 K++L+ +++DFF+YVE T+ Sbjct: 126 KLLLFRPEWFDFFKYVESKTY 146 >5UJU-A nrPDB Length = 576 Score = 28.8 bits (63), Expect = 3.4, Method: Composition-based stats. Identities = 25/95 (26%), Positives = 39/95 (41%), Gaps = 10/95 (10%) Query: 256 LKLMMNLLRDKSRNIQFEAFHVFKVFVANPNKTQPILDILLKNQTKLIEFLSKFQN---- 311 L + + + RD R F+ +V + PN + D+ L+ + KLI+F QN Sbjct: 247 LAITVRIARDVLREAGFDP-NVVTLLATEPNDGALVQDLALRPEIKLIDFTGSTQNGTWL 305 Query: 312 -DRTEDEQFNDEKT----YLVKQIRDLKRAAQQEA 341 Q EK ++ DLK AA+ A Sbjct: 306 ERHAHQAQVYTEKAGVNQIVIDSTDDLKAAAKNIA 340 >4DVY-P nrPDB Length = 876 Score = 28.0 bits (61), Expect = 6.0, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 10/76 (13%) Query: 184 AFATFKDLLTRHKLLSAEFLEQHYDRFFSEY----EKLLHSENYVTKRQSLKLLGELLLD 239 AF + KD T+H L EF +Y +K L E VT + SLK G + +D Sbjct: 450 AFVSKKD--TKHSALITEFNNGDLSYTLKDYGKKADKALDREKNVTLQGSLKHDGVMFVD 507 Query: 240 RHNFTIMTKYISKPEN 255 NF KY + +N Sbjct: 508 YSNF----KYTNASKN 519 >4DVZ-A nrPDB Length = 569 Score = 28.0 bits (61), Expect = 6.0, Method: Composition-based stats. Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 10/76 (13%) Query: 184 AFATFKDLLTRHKLLSAEFLEQHYDRFFSEY----EKLLHSENYVTKRQSLKLLGELLLD 239 AF + KD T+H L EF +Y +K L E VT + SLK G + +D Sbjct: 190 AFVSKKD--TKHSALITEFNNGDLSYTLKDYGKKADKALDREKNVTLQGSLKHDGVMFVD 247 Query: 240 RHNFTIMTKYISKPEN 255 NF KY + +N Sbjct: 248 YSNF----KYTNASKN 259 >5C05-A nrPDB Length = 559 Score = 27.7 bits (60), Expect = 8.0, Method: Composition-based stats. Identities = 10/36 (27%), Positives = 20/36 (55%) Query: 304 EFLSKFQNDRTEDEQFNDEKTYLVKQIRDLKRAAQQ 339 +F+ F D+ +DE+F +K L+ Q++ L + Sbjct: 32 DFIQSFSTDKYKDEKFLKKKEELIAQVKVLLNTKME 67 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.140 0.399 Lambda K H 0.267 0.0436 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 13,445,342 Number of Sequences: 36641 Number of extensions: 554546 Number of successful extensions: 1818 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 1786 Number of HSP's gapped (non-prelim): 37 length of query: 341 length of database: 10,336,785 effective HSP length: 98 effective length of query: 243 effective length of database: 6,745,967 effective search space: 1639269981 effective search space used: 1639269981 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 60 (27.6 bits)