BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q05315 (142 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6A1S-A nrPDB 297 9e-82 6A66-A nrPDB 155 6e-39 3ZXF-A nrPDB 59 7e-10 4Y26-A nrPDB 57 2e-09 3VV1-A nrPDB 43 5e-05 1SLC-A nrPDB 42 8e-05 5NM1-A nrPDB 42 1e-04 1QMJ-A nrPDB 42 1e-04 5JP5-A nrPDB 42 1e-04 4Y1X-A nrPDB 38 0.002 1W6P-A nrPDB 37 0.002 3M2M-A nrPDB 35 0.009 6E20-A nrPDB 35 0.013 1GAN-A nrPDB 35 0.017 2YMZ-A nrPDB 34 0.024 5DG2-A nrPDB 33 0.032 3DUI-A nrPDB 33 0.034 4DGS-A nrPDB 31 0.20 2R0F-A nrPDB 30 0.36 5OHS-A nrPDB 27 2.4 6H03-D nrPDB 27 3.5 1KFU-L nrPDB 26 5.6 3LDG-A nrPDB 26 5.9 >6A1S-A nrPDB Length = 145 Score = 297 bits (761), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 141/142 (99%), Positives = 141/142 (99%) Query: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR 60 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLN PYLQVDFHTEMKEESDIVFHFQVCFGR Sbjct: 4 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNAPYLQVDFHTEMKEESDIVFHFQVCFGR 63 Query: 61 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 120 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA Sbjct: 64 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 123 Query: 121 VKMVQVWRDISLTKFNVSYLKR 142 VKMVQVWRDISLTKFNVSYLKR Sbjct: 124 VKMVQVWRDISLTKFNVSYLKR 145 >6A66-A nrPDB Length = 142 Score = 155 bits (392), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 77/137 (56%), Positives = 95/137 (69%) Query: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR 60 MS LPVPY SLS GS V IKG P+ F+N+P LQVDF+T+M E+SDI FHF+V FG Sbjct: 4 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFHFRVHFGN 63 Query: 61 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 120 VVMN RE+G W + + +PF+DG++FEL I V ++Y++ VNG Y F HRI P Sbjct: 64 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF 123 Query: 121 VKMVQVWRDISLTKFNV 137 VKMVQV RDISLT V Sbjct: 124 VKMVQVSRDISLTSVCV 140 >3ZXF-A nrPDB Length = 138 Score = 58.9 bits (141), Expect = 7e-10, Method: Compositional matrix adjust. Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Query: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG- 59 MS +P + + G+ + I+G N V+ ++ SD HF Sbjct: 3 MSNVPHKSSLPEGIRPGTVLRIRG---LVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 Query: 60 RRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPE 119 VV NS+E G+W ++ +PFQ GQ FE+ I D ++ +V + F HR+ Sbjct: 60 SEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLA 119 Query: 120 AVKMVQVWRDISLTKFNV 137 V++V+V D+ L + Sbjct: 120 RVRLVEVGGDVQLDSVRI 137 >4Y26-A nrPDB Length = 154 Score = 57.4 bits (137), Expect = 2e-09, Method: Compositional matrix adjust. Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 4/126 (3%) Query: 13 SLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-RRVVMNSREYGA 71 + G+ + I+G N V+ ++ SD HF VV NS+E G+ Sbjct: 31 GIRPGTVLRIRG---LVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSEVVFNSKEQGS 87 Query: 72 WKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDIS 131 W ++ +PFQ GQ FE+ I D ++ +V + F HR+ V++V+V D+ Sbjct: 88 WGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARVRLVEVGGDVQ 147 Query: 132 LTKFNV 137 L + Sbjct: 148 LDSVRI 153 >3VV1-A nrPDB Length = 160 Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Query: 40 FHTEMKEESDIVFHFQVCFGR-RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPD 98 FH ++ DIV HF F VV NS G W+ + N PFQ + + L Sbjct: 61 FHINLRTPDDIVLHFNARFDEGAVVNNSTSGGGWQSEDRHAN-PFQQNKIYTLEFVSNGG 119 Query: 99 KYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSY 139 + VNG F R V ++++ + + +VS+ Sbjct: 120 IISIFVNGAHFADFVERTPSHGVHLIEIEGGVHVHSAHVSH 160 >1SLC-A nrPDB Length = 134 Score = 42.0 bits (97), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 21/101 (20%) Query: 45 KEESDIVFHFQVCFG-----RRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISV---- 95 K+++++ HF F +V NS++ GAW + PFQ G E+ IS Sbjct: 36 KDDNNLCLHFNPRFNAHGDVNTIVCNSKDAGAWGAEQRESAFPFQPGSVVEVCISFNQTD 95 Query: 96 ----LPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISL 132 LPD Y+ + F +R+ EA+ + D + Sbjct: 96 LTIKLPDGYE--------FKFPNRLNLEAINYLSAGGDFKI 128 >5NM1-A nrPDB Length = 139 Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 28/128 (21%), Positives = 60/128 (46%), Gaps = 7/128 (5%) Query: 13 SLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR-RVVMNSREYGA 71 + G +V +KG+ + N +++F + ++ I FHF F R+V NS Sbjct: 12 GMCPGWSVVVKGKTSS---NTSMFEINFLSHPGDQ--IAFHFNPRFASSRIVCNSFLANH 66 Query: 72 WKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKP-EAVKMVQVWRDI 130 W ++ +K PF+ + F++ I D + + ++ + HR K ++ +Q+ DI Sbjct: 67 WGKEEVNKTFPFEAKEPFQVEIYSDQDYFHIFIDENKILQYKHRQKQLSSITKLQILNDI 126 Query: 131 SLTKFNVS 138 ++ ++ Sbjct: 127 EISSVEIT 134 >1QMJ-A nrPDB Length = 132 Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 12/127 (9%) Query: 17 GSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQV---CFG--RRVVMNSREYGA 71 G V +KG+ L+ + V+ K+ S ++ HF C G VV NS+E G Sbjct: 13 GECVKVKGKILS---DAKGFSVNVG---KDSSTLMLHFNPRFDCHGDVNTVVCNSKEDGT 66 Query: 72 WKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDIS 131 W ++ + PFQ G + E+ IS + +V V + + F +R+ E ++ + V D Sbjct: 67 WGEEDRKADFPFQQGDKVEICISFDAAEVKVKVP-EVEFEFPNRLGMEKIQYLAVEGDFK 125 Query: 132 LTKFNVS 138 + S Sbjct: 126 VKAIKFS 132 >5JP5-A nrPDB Length = 145 Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 6/99 (6%) Query: 40 FHTEMKEESDIVFHFQVCFGRR-VVMNSREYGAWKQQVES--KNMPFQDGQEFELSISVL 96 F ++ DI FH F VV N++ +W + S +MPF GQ F + I Sbjct: 44 FQINLRCGGDIAFHLNPRFDENAVVRNTQINNSWGPEERSLPGSMPFSRGQRFSVWILCE 103 Query: 97 PDKYQVMVNGQSSYTFDHRIK--PEAVKMVQVWRDISLT 133 ++V V+GQ + HR+ P+ + ++V DI LT Sbjct: 104 GHCFKVAVDGQHICEYSHRLMNLPD-INTLEVAGDIQLT 141 >4Y1X-A nrPDB Length = 154 Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 21/101 (20%) Query: 45 KEESDIVFHFQVCF-----GRRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISV---- 95 K+ +++ HF F +V NS++ GAW + PFQ G E+ I+ Sbjct: 56 KDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQAN 115 Query: 96 ----LPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISL 132 LPD Y+ + F +R+ EA+ + D + Sbjct: 116 LTVKLPDGYE--------FKFPNRLNLEAINYMAADGDFKI 148 >1W6P-A nrPDB Length = 134 Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust. Identities = 25/101 (24%), Positives = 42/101 (41%), Gaps = 21/101 (20%) Query: 45 KEESDIVFHFQVCF-----GRRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISV---- 95 K+ +++ HF F +V NS++ GAW + PFQ G E+ I+ Sbjct: 36 KDSNNLCLHFNPRFNAHGDANTIVCNSKDDGAWGTEQREAVFPFQPGSVAEVCITFDQAN 95 Query: 96 ----LPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISL 132 LPD Y+ + F +R+ EA+ + D + Sbjct: 96 LTVKLPDGYE--------FKFPNRLNLEAINYMAADGDFKI 128 >3M2M-A nrPDB Length = 134 Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 5/93 (5%) Query: 45 KEESDIVFHFQVCF-----GRRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDK 99 K+ +++ HF F +V NS++ G W + PFQ G E+ I+ Sbjct: 36 KDSNNLCLHFNPRFNAHGDANTIVCNSKDDGTWGTEQRETAFPFQPGSITEVCITFDQAD 95 Query: 100 YQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISL 132 + + + F +R+ EA+ + D + Sbjct: 96 LTIKLPDGHEFKFPNRLNMEAINYMAADGDFKI 128 >6E20-A nrPDB Length = 134 Score = 34.7 bits (78), Expect = 0.013, Method: Compositional matrix adjust. Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 9/114 (7%) Query: 13 SLSTGSTVTIKGRP----LACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRVVMNSRE 68 S G T+TI G P +N + D M D H C +V NS + Sbjct: 10 SFKVGQTLTITGVPKPDSTNFAINIGHSPEDIALHMNPRFDA--HGDQC---TIVCNSFQ 64 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVK 122 G+W ++ N PF +EF++ I+ +++ V + S F +R E K Sbjct: 65 SGSWCEEHRDDNFPFIQDKEFQIKITFTNEEFLVTLPDGSEIHFPNRQGSEKYK 118 >1GAN-A nrPDB Length = 134 Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust. Identities = 29/110 (26%), Positives = 43/110 (39%), Gaps = 15/110 (13%) Query: 13 SLSTGSTVTIKGR-PLACFLNEPYLQVDFHTEMKEE-SDIVFHFQVCFG-----RRVVMN 65 +L G V IKG P C F + E+ S+ + HF F ++V N Sbjct: 11 NLKPGHCVEIKGSIPPDC--------KGFAVNLGEDASNFLLHFNARFDLHGDVNKIVCN 62 Query: 66 SREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHR 115 S+E AW + PFQ G E + DK + + ++F R Sbjct: 63 SKEADAWGSEQREGVFPFQQGAEVMVCFEYQTDKIIIKFSSGDQFSFPVR 112 >2YMZ-A nrPDB Length = 130 Score = 33.9 bits (76), Expect = 0.024, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 7/123 (5%) Query: 16 TGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRVVM-NSREYGAWKQ 74 +G T+ IKG ++E + K SD+ HF F V++ NS W+Q Sbjct: 13 SGGTMKIKGH-----ISEDAESFAINLGCKS-SDLALHFNPRFNESVIVCNSLCSDNWQQ 66 Query: 75 QVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTK 134 + K+ F G ++ + L DK+ V + F +R + + + + +T Sbjct: 67 EQRDKHFNFYKGSTVKIIVEFLGDKFLVKLPDGHEVEFPNRHGYDKISYLNILGGFKVTS 126 Query: 135 FNV 137 F V Sbjct: 127 FKV 129 >5DG2-A nrPDB Length = 135 Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust. Identities = 19/89 (21%), Positives = 40/89 (44%), Gaps = 1/89 (1%) Query: 50 IVFHFQVCFGRR-VVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQS 108 + HF F +V NS + W Q+ ++ F G E + +++ DK++V + Sbjct: 45 LNLHFNPRFSESTIVCNSLDGSNWGQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGH 104 Query: 109 SYTFDHRIKPEAVKMVQVWRDISLTKFNV 137 TF +R+ + + V +++ F + Sbjct: 105 ELTFPNRLGHSHLSYLSVRGGFNMSSFKL 133 >3DUI-A nrPDB Length = 135 Score = 33.5 bits (75), Expect = 0.034, Method: Compositional matrix adjust. Identities = 28/131 (21%), Positives = 48/131 (36%), Gaps = 12/131 (9%) Query: 7 PYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRR----- 61 P L G +T+KG + P + K+ + + HF F Sbjct: 6 PVCTNLGLKPGQRLTVKG------IIAPNAKSFVMNLGKDSTHLGLHFNPRFDAHGDVNL 59 Query: 62 VVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAV 121 +V NS++ W + PFQ G E++ S+ P V + G ++F +R+ Sbjct: 60 IVCNSKKMEEWGTEQRETVFPFQKGAPIEITFSINPSDLTVHLPGH-QFSFPNRLGLSVF 118 Query: 122 KMVQVWRDISL 132 D +L Sbjct: 119 DYFDTHGDFTL 129 >4DGS-A nrPDB Length = 340 Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Query: 21 TIKGRPLACFLNEPYLQVDFHTE-----MKEESDIVFHFQVCFGRRVVMN 65 TI G L F+NEP ++ +FHT M + ++ G+ V+ N Sbjct: 276 TIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMAMGKLVLAN 325 >2R0F-A nrPDB Length = 164 Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 9/86 (10%) Query: 44 MKEESDIVFHFQVCFGRR----VVMNSREYGAWKQQVESKNMPFQDGQEFELSISVL--P 97 + + D++ H + RR V NS YG + E + G + SI++ P Sbjct: 51 INAKGDVLLHIGI---RRRENAFVFNSIPYGESRGPEERIPLEGTFGDRRDPSITIFDHP 107 Query: 98 DKYQVMVNGQSSYTFDHRIKPEAVKM 123 D+YQ+M++ ++ Y + R++ K+ Sbjct: 108 DRYQIMIDYKTVYYYKKRLEGRCEKV 133 >5OHS-A nrPDB Length = 672 Score = 27.3 bits (59), Expect = 2.4, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 41/89 (46%), Gaps = 5/89 (5%) Query: 18 STVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVF-----HFQVCFGRRVVMNSREYGAW 72 S ++GR + +EP + D TE+ +SD+ ++ + + ++SR+Y Sbjct: 120 SYFDMRGRRFPLWTSEPGVGRDKTTEITFKSDVSGKAGGDYYNTNYPQPTWLSSRKYALH 179 Query: 73 KQQVESKNMPFQDGQEFELSISVLPDKYQ 101 + F++G E+ I +P+K + Sbjct: 180 VETSAYSVFDFRNGDFHEIEIWAVPEKIE 208 >6H03-D nrPDB Length = 821 Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 6/54 (11%) Query: 60 RRVVMNSREYGAWKQQVESKNMPFQDGQEF-ELSISVLPDKYQVMVNGQSSYTF 112 R V+N++ +G ++V S DG++F LS +VL +QV +N +Y F Sbjct: 130 RNRVINTKSFGGQCRKVFSG-----DGKDFYRLSGNVLSYTFQVKINNDFNYEF 178 >1KFU-L nrPDB Length = 699 Score = 26.2 bits (56), Expect = 5.6, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 12/59 (20%) Query: 31 LNEPYLQ--VDFHTEMKEESDIVFHFQVCFGRRVVMNSREYGAWKQQVESKNMPFQDGQ 87 LNE L V + +E +FHFQ +YG W + V +P +DG+ Sbjct: 115 LNEEILARVVPLNQSFQENYAGIFHFQFW----------QYGEWVEVVVDDRLPTKDGE 163 >3LDG-A nrPDB Length = 384 Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust. Identities = 11/36 (30%), Positives = 21/36 (58%) Query: 84 QDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPE 119 ++G EF++ IS+L D+ +VM++ F + E Sbjct: 137 ENGPEFKIEISLLKDQARVMIDTTGPSLFKRGYRTE 172 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6A1S-A nrPDB 208 5e-55 6A66-A nrPDB 185 5e-48 3ZXF-A nrPDB 177 2e-45 4Y26-A nrPDB 172 4e-44 5NM1-A nrPDB 145 6e-36 1QMJ-A nrPDB 140 3e-34 4Y1X-A nrPDB 132 6e-32 1SLC-A nrPDB 132 7e-32 5JP5-A nrPDB 127 2e-30 3VV1-A nrPDB 115 9e-27 Sequences not found previously or not previously below threshold: 3M2M-A nrPDB 131 9e-32 1W6P-A nrPDB 131 1e-31 3DUI-A nrPDB 95 1e-20 2YMZ-A nrPDB 94 1e-20 1GAN-A nrPDB 94 2e-20 5DG2-A nrPDB 93 5e-20 6E20-A nrPDB 91 2e-19 1UL9-A nrPDB 41 2e-04 2R0F-A nrPDB 35 0.010 1JMU-B nrPDB 31 0.20 2P0L-A nrPDB 29 0.54 5L94-A nrPDB 28 1.4 3QWY-A nrPDB 27 3.2 5DXY-A nrPDB 26 6.5 >6A1S-A nrPDB Length = 145 Score = 208 bits (530), Expect = 5e-55, Method: Composition-based stats. Identities = 141/142 (99%), Positives = 141/142 (99%) Query: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR 60 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLN PYLQVDFHTEMKEESDIVFHFQVCFGR Sbjct: 4 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNAPYLQVDFHTEMKEESDIVFHFQVCFGR 63 Query: 61 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 120 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA Sbjct: 64 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 123 Query: 121 VKMVQVWRDISLTKFNVSYLKR 142 VKMVQVWRDISLTKFNVSYLKR Sbjct: 124 VKMVQVWRDISLTKFNVSYLKR 145 >6A66-A nrPDB Length = 142 Score = 185 bits (470), Expect = 5e-48, Method: Composition-based stats. Identities = 77/137 (56%), Positives = 95/137 (69%) Query: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR 60 MS LPVPY SLS GS V IKG P+ F+N+P LQVDF+T+M E+SDI FHF+V FG Sbjct: 4 MSSLPVPYKLPVSLSVGSCVIIKGTPIHSFINDPQLQVDFYTDMDEDSDIAFHFRVHFGN 63 Query: 61 RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 120 VVMN RE+G W + + +PF+DG++FEL I V ++Y++ VNG Y F HRI P Sbjct: 64 HVVMNRREFGIWMLEETTDYVPFEDGKQFELCIYVHYNEYEIKVNGIRIYGFVHRIPPSF 123 Query: 121 VKMVQVWRDISLTKFNV 137 VKMVQV RDISLT V Sbjct: 124 VKMVQVSRDISLTSVCV 140 >3ZXF-A nrPDB Length = 138 Score = 177 bits (448), Expect = 2e-45, Method: Composition-based stats. Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 4/138 (2%) Query: 1 MSLLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG- 59 MS +P + + G+ + I+G N V+ ++ SD HF Sbjct: 3 MSNVPHKSSLPEGIRPGTVLRIRG---LVPPNASRFHVNLLCGEEQGSDAALHFNPRLDT 59 Query: 60 RRVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPE 119 VV NS+E G+W ++ +PFQ GQ FE+ I D ++ +V + F HR+ Sbjct: 60 SEVVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLA 119 Query: 120 AVKMVQVWRDISLTKFNV 137 V++V+V D+ L + Sbjct: 120 RVRLVEVGGDVQLDSVRI 137 >4Y26-A nrPDB Length = 154 Score = 172 bits (436), Expect = 4e-44, Method: Composition-based stats. Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%) Query: 3 LLPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-RR 61 ++P + + G+ + I+G N V+ ++ SD HF Sbjct: 21 MVPHKSSLPEGIRPGTVLRIRG---LVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSE 77 Query: 62 VVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAV 121 VV NS+E G+W ++ +PFQ GQ FE+ I D ++ +V + F HR+ V Sbjct: 78 VVFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRLPLARV 137 Query: 122 KMVQVWRDISLTKFNV 137 ++V+V D+ L + Sbjct: 138 RLVEVGGDVQLDSVRI 153 >5NM1-A nrPDB Length = 139 Score = 145 bits (366), Expect = 6e-36, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 60/130 (46%), Gaps = 7/130 (5%) Query: 11 AASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR-RVVMNSREY 69 + G +V +KG+ + N +++F + ++ I FHF F R+V NS Sbjct: 10 PEGMCPGWSVVVKGKTSS---NTSMFEINFLSHPGDQ--IAFHFNPRFASSRIVCNSFLA 64 Query: 70 GAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIK-PEAVKMVQVWR 128 W ++ +K PF+ + F++ I D + + ++ + HR K ++ +Q+ Sbjct: 65 NHWGKEEVNKTFPFEAKEPFQVEIYSDQDYFHIFIDENKILQYKHRQKQLSSITKLQILN 124 Query: 129 DISLTKFNVS 138 DI ++ ++ Sbjct: 125 DIEISSVEIT 134 >1QMJ-A nrPDB Length = 132 Score = 140 bits (352), Expect = 3e-34, Method: Composition-based stats. Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 12/130 (9%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-----RRVVMNSRE 68 + G V +KG+ L+ + V+ K+ S ++ HF F VV NS+E Sbjct: 10 VQPGECVKVKGKILS---DAKGFSVNVG---KDSSTLMLHFNPRFDCHGDVNTVVCNSKE 63 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 128 G W ++ + PFQ G + E+ IS + +V V + + F +R+ E ++ + V Sbjct: 64 DGTWGEEDRKADFPFQQGDKVEICISFDAAEVKVKVP-EVEFEFPNRLGMEKIQYLAVEG 122 Query: 129 DISLTKFNVS 138 D + S Sbjct: 123 DFKVKAIKFS 132 >4Y1X-A nrPDB Length = 154 Score = 132 bits (331), Expect = 6e-32, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 11/129 (8%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-----RRVVMNSRE 68 L G + ++G + ++ K+ +++ HF F +V NS++ Sbjct: 31 LKPGECLRVRGE---VAPDAKSFVLNLG---KDSNNLCLHFNPRFNAHGDANTIVCNSKD 84 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 128 GAW + PFQ G E+ I+ V + + F +R+ EA+ + Sbjct: 85 GGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADG 144 Query: 129 DISLTKFNV 137 D + Sbjct: 145 DFKIKCVAF 153 >1SLC-A nrPDB Length = 134 Score = 132 bits (331), Expect = 7e-32, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 11/129 (8%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-----RRVVMNSRE 68 L G + ++G A + ++ K+++++ HF F +V NS++ Sbjct: 11 LKPGECLRVRGEVAA---DAKSFLLNLG---KDDNNLCLHFNPRFNAHGDVNTIVCNSKD 64 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 128 GAW + PFQ G E+ IS + + + F +R+ EA+ + Sbjct: 65 AGAWGAEQRESAFPFQPGSVVEVCISFNQTDLTIKLPDGYEFKFPNRLNLEAINYLSAGG 124 Query: 129 DISLTKFNV 137 D + Sbjct: 125 DFKIKCVAF 133 >3M2M-A nrPDB Length = 134 Score = 131 bits (330), Expect = 9e-32, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 11/129 (8%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-----RRVVMNSRE 68 L G + ++G + ++ K+ +++ HF F +V NS++ Sbjct: 11 LKPGECLKVRGELA---PDAKSFVLNLG---KDSNNLCLHFNPRFNAHGDANTIVCNSKD 64 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 128 G W + PFQ G E+ I+ + + + F +R+ EA+ + Sbjct: 65 DGTWGTEQRETAFPFQPGSITEVCITFDQADLTIKLPDGHEFKFPNRLNMEAINYMAADG 124 Query: 129 DISLTKFNV 137 D + Sbjct: 125 DFKIKCVAF 133 >1W6P-A nrPDB Length = 134 Score = 131 bits (330), Expect = 1e-31, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 48/129 (37%), Gaps = 11/129 (8%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-----RRVVMNSRE 68 L G + ++G + ++ K+ +++ HF F +V NS++ Sbjct: 11 LKPGECLRVRGE---VAPDAKSFVLNLG---KDSNNLCLHFNPRFNAHGDANTIVCNSKD 64 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 128 GAW + PFQ G E+ I+ V + + F +R+ EA+ + Sbjct: 65 DGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADG 124 Query: 129 DISLTKFNV 137 D + Sbjct: 125 DFKIKCVAF 133 >5JP5-A nrPDB Length = 145 Score = 127 bits (319), Expect = 2e-30, Method: Composition-based stats. Identities = 34/137 (24%), Positives = 58/137 (42%), Gaps = 11/137 (8%) Query: 4 LPVPYTEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-RRV 62 +P + L ++ I G L+ + Q++ ++ DI FH F V Sbjct: 15 VPFFTSIPNGLYPSKSIVISGVVLS---DAKRFQIN----LRCGGDIAFHLNPRFDENAV 67 Query: 63 VMNSREYGAWKQQVES--KNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRI-KPE 119 V N++ +W + S +MPF GQ F + I ++V V+GQ + HR+ Sbjct: 68 VRNTQINNSWGPEERSLPGSMPFSRGQRFSVWILCEGHCFKVAVDGQHICEYSHRLMNLP 127 Query: 120 AVKMVQVWRDISLTKFN 136 + ++V DI LT Sbjct: 128 DINTLEVAGDIQLTHVE 144 >3VV1-A nrPDB Length = 160 Score = 115 bits (287), Expect = 9e-27, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 2/101 (1%) Query: 40 FHTEMKEESDIVFHFQVCFGR-RVVMNSREYGAWKQQVESKNMPFQDGQEFELSISVLPD 98 FH ++ DIV HF F VV NS G W+ + N PFQ + + L Sbjct: 61 FHINLRTPDDIVLHFNARFDEGAVVNNSTSGGGWQSEDRHAN-PFQQNKIYTLEFVSNGG 119 Query: 99 KYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKFNVSY 139 + VNG F R V ++++ + + +VS+ Sbjct: 120 IISIFVNGAHFADFVERTPSHGVHLIEIEGGVHVHSAHVSH 160 >3DUI-A nrPDB Length = 135 Score = 94.8 bits (234), Expect = 1e-20, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 12/128 (9%) Query: 13 SLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRR-----VVMNSR 67 L G +T+KG N ++ K+ + + HF F +V NS+ Sbjct: 12 GLKPGQRLTVKGIIA---PNAKSFVMNLG---KDSTHLGLHFNPRFDAHGDVNLIVCNSK 65 Query: 68 EYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVW 127 + W + PFQ G E++ S+ P V + G ++F +R+ Sbjct: 66 KMEEWGTEQRETVFPFQKGAPIEITFSINPSDLTVHLPG-HQFSFPNRLGLSVFDYFDTH 124 Query: 128 RDISLTKF 135 D +L Sbjct: 125 GDFTLRSV 132 >2YMZ-A nrPDB Length = 130 Score = 94.4 bits (233), Expect = 1e-20, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 7/122 (5%) Query: 17 GSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRV-VMNSREYGAWKQQ 75 G T+ IKG + ++ + SD+ HF F V V NS W+Q+ Sbjct: 14 GGTMKIKG---HISEDAESFAINLGC---KSSDLALHFNPRFNESVIVCNSLCSDNWQQE 67 Query: 76 VESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTKF 135 K+ F G ++ + L DK+ V + F +R + + + + +T F Sbjct: 68 QRDKHFNFYKGSTVKIIVEFLGDKFLVKLPDGHEVEFPNRHGYDKISYLNILGGFKVTSF 127 Query: 136 NV 137 V Sbjct: 128 KV 129 >1GAN-A nrPDB Length = 134 Score = 94.0 bits (232), Expect = 2e-20, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 11/120 (9%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFG-----RRVVMNSRE 68 L G V IKG + + V+ ++ S+ + HF F ++V NS+E Sbjct: 12 LKPGHCVEIKG---SIPPDCKGFAVNLG---EDASNFLLHFNARFDLHGDVNKIVCNSKE 65 Query: 69 YGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWR 128 AW + PFQ G E + DK + + ++F R ++ + + Sbjct: 66 ADAWGSEQREGVFPFQQGAEVMVCFEYQTDKIIIKFSSGDQFSFPVRKVLPSIPFLSLEG 125 >5DG2-A nrPDB Length = 135 Score = 92.9 bits (229), Expect = 5e-20, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 7/125 (5%) Query: 14 LSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGR-RVVMNSREYGAW 72 + GST+ I G + ++ + HF F +V NS + W Sbjct: 15 MKPGSTLKITG---SIADGTDGFVINLGQG---TDKLNLHFNPRFSESTIVCNSLDGSNW 68 Query: 73 KQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISL 132 Q+ ++ F G E + +++ DK++V + TF +R+ + + V ++ Sbjct: 69 GQEQREDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGHSHLSYLSVRGGFNM 128 Query: 133 TKFNV 137 + F + Sbjct: 129 SSFKL 133 >6E20-A nrPDB Length = 134 Score = 90.9 bits (224), Expect = 2e-19, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 11/130 (8%) Query: 13 SLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRR-----VVMNSR 67 S G T+TI G P + ++ + DI H F +V NS Sbjct: 10 SFKVGQTLTITGVP---KPDSTNFAINIGHSPE---DIALHMNPRFDAHGDQCTIVCNSF 63 Query: 68 EYGAWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVKMVQVW 127 + G+W ++ N PF +EF++ I+ +++ V + S F +R E K + Sbjct: 64 QSGSWCEEHRDDNFPFIQDKEFQIKITFTNEEFLVTLPDGSEIHFPNRQGSEKYKYMYFE 123 Query: 128 RDISLTKFNV 137 ++ + + Sbjct: 124 GEVRIQGVEI 133 >1UL9-A nrPDB Length = 150 Score = 41.2 bits (95), Expect = 2e-04, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 9/115 (7%) Query: 9 TEAASLSTGSTVTIKGRPLACFLNEPYLQVDFHTEMKEESDIVFHFQVCFGRRV-VMNSR 67 S I+ +F + +I+ H + G V V NSR Sbjct: 12 KLQNDFKPESVAAIRSSAFNSKGGTTVF--NFLSA---GENILLHISIRPGENVIVFNSR 66 Query: 68 E-YGAWKQQVESKNM-PFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEA 120 GAW + F+ +++ D++Q+ + +S ++ RIK A Sbjct: 67 LKNGAWGPEERIPYAEKFRPPNP-SITVIDHGDRFQIRFDYGTSIYYNKRIKENA 120 >2R0F-A nrPDB Length = 164 Score = 35.1 bits (79), Expect = 0.010, Method: Composition-based stats. Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 3/72 (4%) Query: 48 SDIVFHFQVCF-GRRVVMNSREYG-AWKQQVESK-NMPFQDGQEFELSISVLPDKYQVMV 104 D++ H + V NS YG + + F D ++ ++I PD+YQ+M+ Sbjct: 55 GDVLLHIGIRRRENAFVFNSIPYGESRGPEERIPLEGTFGDRRDPSITIFDHPDRYQIMI 114 Query: 105 NGQSSYTFDHRI 116 + ++ Y + R+ Sbjct: 115 DYKTVYYYKKRL 126 >1JMU-B nrPDB Length = 666 Score = 30.8 bits (68), Expect = 0.20, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 28/87 (32%), Gaps = 16/87 (18%) Query: 40 FHTEMKEESDIVFHFQVCFGRRVVM---------------NSREYGAWKQQVESKNM-PF 83 F ++ + + +HF + G RVV S + +W + F Sbjct: 303 FQIQVTDNTGTNWHFNLRGGTRVVNLDQIAPMRFVLDLGGKSYKETSWDPNGKKVGFIVF 362 Query: 84 QDGQEFELSISVLPDKYQVMVNGQSSY 110 Q FEL + +VN Y Sbjct: 363 QSKIPFELWTAASQIGQATVVNYVQLY 389 >2P0L-A nrPDB Length = 288 Score = 29.3 bits (64), Expect = 0.54, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 3/59 (5%) Query: 83 FQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKPEAVK---MVQVWRDISLTKFNVS 138 +Q + FE+ S P K+ + +NG+ R + + V D +S Sbjct: 136 YQPIEHFEVETSYCPGKFDLSINGKKFAGLAQRRIKNGIAVSIYLSVCGDQKGRSQMIS 194 >5L94-A nrPDB Length = 410 Score = 28.1 bits (61), Expect = 1.4, Method: Composition-based stats. Identities = 7/48 (14%), Positives = 22/48 (45%), Gaps = 1/48 (2%) Query: 71 AWKQQVESKNMPFQDGQEFELSISVLPDKYQVMVNGQSSYTFDHRIKP 118 +W +++ + P Q +E ++ D + ++ ++ ++ D R Sbjct: 27 SWYEEMRN-TAPVQWDEERQVWDVFHYDGVKEVLEQKNIFSSDRRPPQ 73 >3QWY-A nrPDB Length = 308 Score = 27.0 bits (58), Expect = 3.2, Method: Composition-based stats. Identities = 5/27 (18%), Positives = 12/27 (44%) Query: 76 VESKNMPFQDGQEFELSISVLPDKYQV 102 ++PF+ G+ E+ D ++ Sbjct: 159 ERETDLPFEQGERLEILSKTNQDWWEA 185 >5DXY-A nrPDB Length = 387 Score = 25.8 bits (55), Expect = 6.5, Method: Composition-based stats. Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 77 ESKNMPFQDGQEFELSISVLP--DKYQVMVNGQSSYTFDHRIKPEAVKMVQVWRDISLTK 134 + + +Q G +S + P K+++++ + T+ A ++++V D + Sbjct: 107 RASHQVYQPGGAAPISSTSKPISKKWEILLPDATYGTYPEPRPLAANEILEVVEDYRVAA 166 Query: 135 FN 136 N Sbjct: 167 IN 168 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.131 0.347 Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,855,194 Number of Sequences: 36641 Number of extensions: 156705 Number of successful extensions: 417 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 41 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 348 Number of HSP's gapped (non-prelim): 47 length of query: 142 length of database: 10,336,785 effective HSP length: 87 effective length of query: 55 effective length of database: 7,149,018 effective search space: 393195990 effective search space used: 393195990 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 54 (25.4 bits)