BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q04631 (377 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1O1S-A nrPDB 773 0.0 2BED-A nrPDB 641 0.0 2H6F-A nrPDB 641 0.0 4MBG-A nrPDB 203 1e-52 3Q78-A nrPDB 200 1e-51 4YDO-A nrPDB 146 1e-35 1DCE-A nrPDB 75 7e-14 3C72-A nrPDB 74 9e-14 5G04-F nrPDB 33 0.16 1U7N-A nrPDB 32 0.44 3IJD-A nrPDB 30 1.8 4AXG-A nrPDB 28 5.7 6IH4-A nrPDB 28 7.0 6NU3-c nrPDB 28 9.1 >1O1S-A nrPDB Length = 380 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 376/377 (99%), Positives = 376/377 (99%) Query: 1 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 60 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS Sbjct: 4 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 63 Query: 61 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 120 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 64 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 123 Query: 121 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLK 180 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYI AIIEEQPKNYQVWHHRRVLVEWLK Sbjct: 124 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWLK 183 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 184 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 243 Query: 241 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 300 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL Sbjct: 244 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 303 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 304 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 363 Query: 361 RSLQSKHSRESDIPASV 377 RSLQSKHSRESDIPASV Sbjct: 364 RSLQSKHSRESDIPASV 380 >2BED-A nrPDB Length = 313 Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/313 (99%), Positives = 312/313 (99%) Query: 54 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS 113 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS Sbjct: 1 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS 60 Query: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRR 173 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYI AIIEEQPKNYQVWHHRR Sbjct: 61 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRR 120 Query: 174 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN 233 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN Sbjct: 121 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN 180 Query: 234 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP 293 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP Sbjct: 181 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP 240 Query: 294 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 353 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK Sbjct: 241 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 300 Query: 354 EYWRYIGRSLQSK 366 EYWRYIGRSLQSK Sbjct: 301 EYWRYIGRSLQSK 313 >2H6F-A nrPDB Length = 382 Score = 641 bits (1653), Expect = 0.0, Method: Compositional matrix adjust. Identities = 350/377 (92%), Positives = 364/377 (96%) Query: 1 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 60 MAATEGVGE+A GGEPGQP QPPP P PPP QQ +EEMAAEAGEA ASPMDDGF+SLDS Sbjct: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 Query: 61 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 120 P+YVLYRDRAEWADIDPVPQNDGP+PVVQIIYS+KFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 Query: 121 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLK 180 RDAIELNAANYTVWHFRRVLL+SLQKDL EEMNYI AIIEEQPKNYQVWHHRRVLVEWL+ Sbjct: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEF+LWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 Query: 241 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 300 +FVISNTTGY+DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS+YPNLLNQLL Sbjct: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 Query: 361 RSLQSKHSRESDIPASV 377 RSLQSKHS E+D P +V Sbjct: 361 RSLQSKHSTENDSPTNV 377 >4MBG-A nrPDB Length = 367 Score = 203 bits (516), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 123/356 (34%), Positives = 193/356 (54%), Gaps = 51/356 (14%) Query: 66 YRDRAEWADIDPVPQNDGPS----PVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTR 121 Y EWA I P+ NDG P+ I YS ++ + Y RAV+ +E SERA +LT Sbjct: 19 YSSDPEWASIKPIELNDGSDFGAMPLATISYSPEYLEATSYLRAVMAANEMSERALRLTG 78 Query: 122 DAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLV----E 177 D I +N A+YTVW +R +L +L KDL EE+ ++ + + KNYQ+WHHR+VL+ Sbjct: 79 DIISMNPAHYTVWIYRAKILFALGKDLNEEIEWLNKVALKHLKNYQIWHHRQVLMSSRAH 138 Query: 178 WLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDN--ELQYVDQLLKEDVRNNS 235 + P +E +F+ ++ QDAK+YH W +R W+++ F+LWD+ E+Q V+ LLK DVRNNS Sbjct: 139 FPTLPPREQDFLMEMFAQDAKSYHVWTYRHWLVRHFKLWDHPREIQDVEALLKADVRNNS 198 Query: 236 VWNQRHFV-------------ISNTTGYS---------DRAVLEREVQYTLEMIKLVPHN 273 WN R+ + + NTTG S D +++ E+QY+ I P N Sbjct: 199 AWNHRYMLRFGPRDENEFDAGLHNTTGPSSEKGRLPVVDEDLVDSELQYSQSRILEAPEN 258 Query: 274 ESAWNYLKGILQDRG--LSRYPNLL----------NQLLDLQPSHSSPYLIAFLVDIYED 321 S W+Y +G+LQ G LS + + Q++D+ + S + I +L D+Y Sbjct: 259 RSPWSYARGVLQAAGRPLSEWKDFARSFVVEKQENGQVVDV--AVKSSHAIEWLADVYA- 315 Query: 322 MLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSRESDIPASV 377 + D E +A+++ +L ++ D IR+ YW Y R + + + ++I AS Sbjct: 316 ----EEDGSEGSAAEAVKMLTLLKEKYDPIRRNYWEYRIRQITASAAHATEISASA 367 >3Q78-A nrPDB Length = 349 Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 118/330 (35%), Positives = 184/330 (55%), Gaps = 29/330 (8%) Query: 60 SPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKL 119 + TY+ R WAD+ P+ Q+DGP+PVV I+YSE+++D DYFRA+ ++E+SERA +L Sbjct: 17 TSTYIPMSQRRSWADVKPIMQDDGPNPVVPIMYSEEYKDAMDYFRAIAAKEEKSERALEL 76 Query: 120 TRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWL 179 T + +N A+YTVW +R LL SL K L++E+ + + K+YQVWHHR +L++ + Sbjct: 77 TEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 Query: 180 --KDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRL--------WDNELQYVDQLLKE 229 +DP E+E+I L D KNYH W + W+ F W +EL + +++L+ Sbjct: 137 SPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 Query: 230 DVRNNSVWNQRHFV-ISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 D RNNS W R ++ +S + L+ E+ Y L+ I L+PHN SAWNYL+G L+ Sbjct: 197 DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFS 256 Query: 289 LSRYPNLLNQLLDLQPSHSSP---YLIAFLVDIYED------------MLENQCDN--KE 331 L P +L +L S +P + AF + D LE D+ ++ Sbjct: 257 LPLVP-ILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQ 315 Query: 332 DILNKALELCEILAKEKDTIRKEYWRYIGR 361 + ++ A ++ E L+ E D +R YW + R Sbjct: 316 NRVDDAAKVFEKLSSEYDQMRAGYWEFRRR 345 >4YDO-A nrPDB Length = 329 Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 86/310 (27%), Positives = 167/310 (53%), Gaps = 22/310 (7%) Query: 69 RAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 + +++DI PV N + QI+Y E ++ + ++++ +E SERA +T I A Sbjct: 29 KYDYSDITPVDINTEEPQICQILYDEDYKQIMGILLSLMKAEEYSERALHITELGINELA 88 Query: 129 ANYTVWHFRRVLLRSL-QKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLK------- 180 ++YT+W +R +L++L ++L +E+++ I + KNYQ+W++R++++ + Sbjct: 89 SHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNNDF 148 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDN--ELQYVDQLLKEDVRNNSVWN 238 DP +E + +L+ D KN+H W +R+W++ F L ++ EL +VD+++ D++NNS W+ Sbjct: 149 DPYREFPILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAWS 208 Query: 239 QRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQ--DRGLSRYPNLL 296 R F++ + + ++ E+ Y + I P N S WNYL GI + DR +++ Sbjct: 209 HRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEFS 268 Query: 297 NQLLDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEY 355 Q +DL+ +S + + L IY ++ N++ + ++L + D IR + Sbjct: 269 LQFVDLEKDQVTSSFALETLAKIY---------TQQKKYNESRTVYDLLKSKYDPIRSNF 319 Query: 356 WRYIGRSLQS 365 W Y L S Sbjct: 320 WDYQISKLTS 329 >1DCE-A nrPDB Length = 567 Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 20/197 (10%) Query: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKD---------LQEEMNYIIAI 158 Q E E +LT + N T+W+ RR +L+ L+ + ++ E+ ++ + Sbjct: 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC 99 Query: 159 IEEQPKNYQVWHHRRVLVEWLKDP--SQELEFIADILNQDAKNYHAWQHRQW-VIQEFRL 215 + PK+Y WHHR L+ L +P ++ELE A L D +N+H W +R++ Q Sbjct: 100 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 159 Query: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVI--------SNTTGYSDRAVLEREVQYTLEMI 267 EL + D L+ + N S W+ R ++ S G VL +E++ Sbjct: 160 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAF 219 Query: 268 KLVPHNESAWNYLKGIL 284 P+++SAW Y + +L Sbjct: 220 FTDPNDQSAWFYHRWLL 236 >3C72-A nrPDB Length = 334 Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 53/197 (26%), Positives = 92/197 (46%), Gaps = 20/197 (10%) Query: 108 QRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKD---------LQEEMNYIIAI 158 Q E E +LT + N T+W+ RR +L+ L+ + ++ E+ ++ + Sbjct: 44 QAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC 103 Query: 159 IEEQPKNYQVWHHRRVLVEWLKDP--SQELEFIADILNQDAKNYHAWQHRQW-VIQEFRL 215 + PK+Y WHHR L+ L +P ++ELE A L D +N+H W +R++ Q Sbjct: 104 LRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWDYRRFVAAQAAVA 163 Query: 216 WDNELQYVDQLLKEDVRNNSVWNQRHFVI--------SNTTGYSDRAVLEREVQYTLEMI 267 EL + D L+ + N S W+ R ++ S G VL +E++ Sbjct: 164 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAF 223 Query: 268 KLVPHNESAWNYLKGIL 284 P+++SAW Y + +L Sbjct: 224 FTDPNDQSAWFYHRWLL 240 >5G04-F nrPDB Length = 824 Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust. Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 1/116 (0%) Query: 111 ERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWH 170 E ++A R+AI +N +Y W+ ++ +K EM++ A ++ P++ + Sbjct: 615 EELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQKA-LDINPQSSVLLC 673 Query: 171 HRRVLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQL 226 H V+ LK + L+ + + D KN HR V+ + + LQ +++L Sbjct: 674 HIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKYKSALQELEEL 729 >1U7N-A nrPDB Length = 336 Score = 32.0 bits (71), Expect = 0.44, Method: Compositional matrix adjust. Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 7/122 (5%) Query: 72 WADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANY 131 A+ D P++ V+ Y+EK R+V + +L + +LT+ A EL AA+ Sbjct: 145 GANADNKPEHLVQYAVLGSFYAEKVRNVQNPRVGLLNNGTEETKGSELTKKAFELLAADE 204 Query: 132 TVWHFRRVLLRSLQKDLQEEM-------NYIIAIIEEQPKNYQVWHHRRVLVEWLKDPSQ 184 T+ V R L + + + N ++ IE N +L E +K Sbjct: 205 TINFVGNVEARELLNGVADVVVTDGFTGNAVLKSIEGTAMNMMSLLKTAILSEGVKGKMG 264 Query: 185 EL 186 L Sbjct: 265 AL 266 >3IJD-A nrPDB Length = 315 Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 30/55 (54%) Query: 323 LENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSRESDIPASV 377 LEN N EDILNK++ L + + E E IG +++S R+ +I AS+ Sbjct: 241 LENDLMNCEDILNKSVSLSKSIFNELMEFCLEKGIPIGCNIESVSVRKVEIEASI 295 >4AXG-A nrPDB Length = 248 Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 1 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAAS 49 M E SAP E G+PE P P A+ + +E E GE A + Sbjct: 1 MVVLETEKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGN 49 >6IH4-A nrPDB Length = 338 Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYI 155 R + RA+ QR E L D I LNA WH +RV L +L E+ +Y+ Sbjct: 150 IRGMGAVGRAIAQRLAGFEMNL-LYCDEIPLNAEQEKAWHVQRVTL----DELLEKCDYV 204 Query: 156 IAII 159 + ++ Sbjct: 205 VPMV 208 >6NU3-c nrPDB Length = 332 Score = 27.7 bits (60), Expect = 9.1, Method: Compositional matrix adjust. Identities = 27/102 (26%), Positives = 43/102 (42%), Gaps = 8/102 (7%) Query: 262 YTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLN-----QLLDLQPSHSSPYLIAFLV 316 ++L+++K N + Q G+ + LLN +L + S S L FL Sbjct: 83 FSLDLLKTAFVNSCYIKSEEAKRQQLGIEKEAVLLNLKSNQELSEQGTSFSQTCLTQFLE 142 Query: 317 DIYEDMLENQCDNKEDILNKALELCEI---LAKEKDTIRKEY 355 D Y DM N D L +C + LA E+ T+ +E+ Sbjct: 143 DEYPDMPTEGIKNLVDFLTGEEVVCHVARNLAVEQLTLSEEF 184 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1O1S-A nrPDB 636 0.0 2H6F-A nrPDB 541 e-154 2BED-A nrPDB 522 e-148 3Q78-A nrPDB 391 e-109 4YDO-A nrPDB 381 e-106 4MBG-A nrPDB 379 e-106 1DCE-A nrPDB 230 1e-60 3C72-A nrPDB 224 4e-59 Sequences not found previously or not previously below threshold: 5G04-F nrPDB 43 2e-04 3J9M-A1 nrPDB 35 0.057 5WC4-A nrPDB 33 0.20 5J8N-A nrPDB 33 0.21 5ZLM-A nrPDB 32 0.31 2WW2-A nrPDB 32 0.50 6GAZ-Ao nrPDB 32 0.53 6GAW-Ao nrPDB 32 0.57 4WUM-A nrPDB 32 0.58 6MZC-I nrPDB 32 0.58 2GWR-A nrPDB 32 0.59 4YJY-A nrPDB 31 0.69 6CGR-k nrPDB 31 0.72 1XET-A nrPDB 31 0.72 4I80-A nrPDB 31 0.73 4AXG-A nrPDB 31 0.85 6DXA-A nrPDB 31 0.88 1UOU-A nrPDB 30 1.1 4UUD-B nrPDB 30 1.7 5NNP-A nrPDB 30 1.9 6AHD-v nrPDB 29 3.7 4QDM-A nrPDB 29 4.6 3WEN-A nrPDB 28 7.3 6AHR-F nrPDB 28 8.8 3AJA-A nrPDB 27 9.6 >1O1S-A nrPDB Length = 380 Score = 636 bits (1639), Expect = 0.0, Method: Composition-based stats. Identities = 376/377 (99%), Positives = 376/377 (99%) Query: 1 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 60 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS Sbjct: 4 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 63 Query: 61 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 120 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 64 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 123 Query: 121 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLK 180 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYI AIIEEQPKNYQVWHHRRVLVEWLK Sbjct: 124 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRRVLVEWLK 183 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 184 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 243 Query: 241 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 300 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL Sbjct: 244 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 303 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 304 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 363 Query: 361 RSLQSKHSRESDIPASV 377 RSLQSKHSRESDIPASV Sbjct: 364 RSLQSKHSRESDIPASV 380 >2H6F-A nrPDB Length = 382 Score = 541 bits (1394), Expect = e-154, Method: Composition-based stats. Identities = 350/377 (92%), Positives = 364/377 (96%) Query: 1 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDS 60 MAATEGVGE+A GGEPGQP QPPP P PPP QQ +EEMAAEAGEA ASPMDDGF+SLDS Sbjct: 1 MAATEGVGEAAQGGEPGQPAQPPPQPHPPPPQQQHKEEMAAEAGEAVASPMDDGFVSLDS 60 Query: 61 PTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLT 120 P+YVLYRDRAEWADIDPVPQNDGP+PVVQIIYS+KFRDVYDYFRAVLQRDERSERAFKLT Sbjct: 61 PSYVLYRDRAEWADIDPVPQNDGPNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLT 120 Query: 121 RDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLK 180 RDAIELNAANYTVWHFRRVLL+SLQKDL EEMNYI AIIEEQPKNYQVWHHRRVLVEWL+ Sbjct: 121 RDAIELNAANYTVWHFRRVLLKSLQKDLHEEMNYITAIIEEQPKNYQVWHHRRVLVEWLR 180 Query: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQR 240 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEF+LWDNELQYVDQLLKEDVRNNSVWNQR Sbjct: 181 DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQR 240 Query: 241 HFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLL 300 +FVISNTTGY+DRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLS+YPNLLNQLL Sbjct: 241 YFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKYPNLLNQLL 300 Query: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG Sbjct: 301 DLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIG 360 Query: 361 RSLQSKHSRESDIPASV 377 RSLQSKHS E+D P +V Sbjct: 361 RSLQSKHSTENDSPTNV 377 >2BED-A nrPDB Length = 313 Score = 522 bits (1343), Expect = e-148, Method: Composition-based stats. Identities = 312/313 (99%), Positives = 312/313 (99%) Query: 54 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS 113 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS Sbjct: 1 GFLSLDSPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERS 60 Query: 114 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRR 173 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYI AIIEEQPKNYQVWHHRR Sbjct: 61 ERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYITAIIEEQPKNYQVWHHRR 120 Query: 174 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN 233 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN Sbjct: 121 VLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRN 180 Query: 234 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP 293 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP Sbjct: 181 NSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYP 240 Query: 294 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 353 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK Sbjct: 241 NLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRK 300 Query: 354 EYWRYIGRSLQSK 366 EYWRYIGRSLQSK Sbjct: 301 EYWRYIGRSLQSK 313 >3Q78-A nrPDB Length = 349 Score = 391 bits (1003), Expect = e-109, Method: Composition-based stats. Identities = 118/331 (35%), Positives = 184/331 (55%), Gaps = 29/331 (8%) Query: 60 SPTYVLYRDRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKL 119 + TY+ R WAD+ P+ Q+DGP+PVV I+YSE+++D DYFRA+ ++E+SERA +L Sbjct: 17 TSTYIPMSQRRSWADVKPIMQDDGPNPVVPIMYSEEYKDAMDYFRAIAAKEEKSERALEL 76 Query: 120 TRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWL 179 T + +N A+YTVW +R LL SL K L++E+ + + K+YQVWHHR +L++ + Sbjct: 77 TEIIVRMNPAHYTVWQYRFSLLTSLNKSLEDELRLMNEFAVQNLKSYQVWHHRLLLLDRI 136 Query: 180 --KDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRL--------WDNELQYVDQLLKE 229 +DP E+E+I L D KNYH W + W+ F W +EL + +++L+ Sbjct: 137 SPQDPVSEIEYIHGSLLPDPKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRV 196 Query: 230 DVRNNSVWNQRHFV-ISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRG 288 D RNNS W R ++ +S + L+ E+ Y L+ I L+PHN SAWNYL+G L+ Sbjct: 197 DGRNNSAWGWRWYLRVSRPGAETSSRSLQDELIYILKSIHLIPHNVSAWNYLRGFLKHFS 256 Query: 289 LSRYPNLLNQLLDLQPSHSSP---YLIAFLVDIYED------------MLENQCDN--KE 331 L P +L +L S +P + AF + D LE D+ ++ Sbjct: 257 LPLVP-ILPAILPYTASKLNPDIETVEAFGFPMPSDPLPEDTPLPVPLALEYLADSFIEQ 315 Query: 332 DILNKALELCEILAKEKDTIRKEYWRYIGRS 362 + ++ A ++ E L+ E D +R YW + R Sbjct: 316 NRVDDAAKVFEKLSSEYDQMRAGYWEFRRRE 346 >4YDO-A nrPDB Length = 329 Score = 381 bits (978), Expect = e-106, Method: Composition-based stats. Identities = 86/311 (27%), Positives = 167/311 (53%), Gaps = 22/311 (7%) Query: 68 DRAEWADIDPVPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELN 127 + +++DI PV N + QI+Y E ++ + ++++ +E SERA +T I Sbjct: 28 SKYDYSDITPVDINTEEPQICQILYDEDYKQIMGILLSLMKAEEYSERALHITELGINEL 87 Query: 128 AANYTVWHFRRVLLRSL-QKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLK------ 180 A++YT+W +R +L++L ++L +E+++ I + KNYQ+W++R++++ + Sbjct: 88 ASHYTIWIYRFNILKNLPNRNLYDELDWCEEIALDNEKNYQIWNYRQLIIGQIMELNNND 147 Query: 181 -DPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDN--ELQYVDQLLKEDVRNNSVW 237 DP +E + +L+ D KN+H W +R+W++ F L ++ EL +VD+++ D++NNS W Sbjct: 148 FDPYREFPILEAMLSSDPKNHHVWSYRKWLVDTFDLHNDAKELSFVDKVIDTDLKNNSAW 207 Query: 238 NQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQ--DRGLSRYPNL 295 + R F++ + + ++ E+ Y + I P N S WNYL GI + DR +++ Sbjct: 208 SHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQNPSTWNYLLGIHERFDRSITQLEEF 267 Query: 296 LNQLLDLQPSH-SSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKEKDTIRKE 354 Q +DL+ +S + + L IY ++ N++ + ++L + D IR Sbjct: 268 SLQFVDLEKDQVTSSFALETLAKIY---------TQQKKYNESRTVYDLLKSKYDPIRSN 318 Query: 355 YWRYIGRSLQS 365 +W Y L S Sbjct: 319 FWDYQISKLTS 329 >4MBG-A nrPDB Length = 367 Score = 379 bits (974), Expect = e-106, Method: Composition-based stats. Identities = 123/356 (34%), Positives = 193/356 (54%), Gaps = 51/356 (14%) Query: 66 YRDRAEWADIDPVPQNDGPS----PVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTR 121 Y EWA I P+ NDG P+ I YS ++ + Y RAV+ +E SERA +LT Sbjct: 19 YSSDPEWASIKPIELNDGSDFGAMPLATISYSPEYLEATSYLRAVMAANEMSERALRLTG 78 Query: 122 DAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLV----E 177 D I +N A+YTVW +R +L +L KDL EE+ ++ + + KNYQ+WHHR+VL+ Sbjct: 79 DIISMNPAHYTVWIYRAKILFALGKDLNEEIEWLNKVALKHLKNYQIWHHRQVLMSSRAH 138 Query: 178 WLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDN--ELQYVDQLLKEDVRNNS 235 + P +E +F+ ++ QDAK+YH W +R W+++ F+LWD+ E+Q V+ LLK DVRNNS Sbjct: 139 FPTLPPREQDFLMEMFAQDAKSYHVWTYRHWLVRHFKLWDHPREIQDVEALLKADVRNNS 198 Query: 236 VWNQRHFV-------------ISNTTGYS---------DRAVLEREVQYTLEMIKLVPHN 273 WN R+ + + NTTG S D +++ E+QY+ I P N Sbjct: 199 AWNHRYMLRFGPRDENEFDAGLHNTTGPSSEKGRLPVVDEDLVDSELQYSQSRILEAPEN 258 Query: 274 ESAWNYLKGILQDRG--LSRYPNLL----------NQLLDLQPSHSSPYLIAFLVDIYED 321 S W+Y +G+LQ G LS + + Q++D+ + S + I +L D+Y Sbjct: 259 RSPWSYARGVLQAAGRPLSEWKDFARSFVVEKQENGQVVDV--AVKSSHAIEWLADVYA- 315 Query: 322 MLENQCDNKEDILNKALELCEILAKEKDTIRKEYWRYIGRSLQSKHSRESDIPASV 377 + D E +A+++ +L ++ D IR+ YW Y R + + + ++I AS Sbjct: 316 ----EEDGSEGSAAEAVKMLTLLKEKYDPIRRNYWEYRIRQITASAAHATEISASA 367 >1DCE-A nrPDB Length = 567 Score = 230 bits (585), Expect = 1e-60, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%) Query: 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKD-------- 147 ++ Q E E +LT + N T+W+ RR +L+ L+ + Sbjct: 28 YQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAA 87 Query: 148 -LQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLKDP--SQELEFIADILNQDAKNYHAWQ 204 ++ E+ ++ + + PK+Y WHHR L+ L +P ++ELE A L D +N+H W Sbjct: 88 LVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWD 147 Query: 205 HRQW-VIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVI--------SNTTGYSDRAV 255 +R++ Q EL + D L+ + N S W+ R ++ S G V Sbjct: 148 YRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENV 207 Query: 256 LEREVQYTLEMIKLVPHNESAWNYLKGIL 284 L +E++ P+++SAW Y + +L Sbjct: 208 LLKELELVQNAFFTDPNDQSAWFYHRWLL 236 Score = 61.7 bits (148), Expect = 5e-10, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 14/117 (11%) Query: 115 RAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRV 174 R +L +E + N+ W +RR + EE+ + ++I NY WH+R Sbjct: 127 RELELCARFLEADERNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSC 186 Query: 175 LVEWL-KDP-------------SQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWD 217 L+ L P +ELE + + D + AW + +W++ D Sbjct: 187 LLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDPNDQSAWFYHRWLLGRAEPHD 243 >3C72-A nrPDB Length = 334 Score = 224 bits (571), Expect = 4e-59, Method: Composition-based stats. Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 20/209 (9%) Query: 96 FRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKD-------- 147 ++ Q E E +LT + N T+W+ RR +L+ L+ + Sbjct: 32 YQSATQAVFQKRQAGELDESVLELTSQILGANPDFATLWNCRREVLQHLETEKSPEESAA 91 Query: 148 -LQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLKDP--SQELEFIADILNQDAKNYHAWQ 204 ++ E+ ++ + + PK+Y WHHR L+ L +P ++ELE A L D +N+H W Sbjct: 92 LVKAELGFLESCLRVNPKSYGTWHHRCWLLSRLPEPNWARELELCARFLEADERNFHCWD 151 Query: 205 HRQW-VIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVI--------SNTTGYSDRAV 255 +R++ Q EL + D L+ + N S W+ R ++ S G V Sbjct: 152 YRRFVAAQAAVAPAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENV 211 Query: 256 LEREVQYTLEMIKLVPHNESAWNYLKGIL 284 L +E++ P+++SAW Y + +L Sbjct: 212 LLKELELVQNAFFTDPNDQSAWFYHRWLL 240 Score = 35.5 bits (80), Expect = 0.040, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 27/74 (36%), Gaps = 13/74 (17%) Query: 117 FKLTRDAIELNAANYTVWHFRRVLLRSL-------------QKDLQEEMNYIIAIIEEQP 163 T I N +NY+ WH+R LL L + L +E+ + P Sbjct: 168 LAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDP 227 Query: 164 KNYQVWHHRRVLVE 177 + W + R L+ Sbjct: 228 NDQSAWFYHRWLLG 241 >5G04-F nrPDB Length = 824 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 28/137 (20%), Positives = 56/137 (40%), Gaps = 1/137 (0%) Query: 90 IIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYTVWHFRRVLLRSLQKDLQ 149 I + Y E ++A R+AI +N +Y W+ ++ +K Sbjct: 594 IQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSL 653 Query: 150 EEMNYIIAIIEEQPKNYQVWHHRRVLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWV 209 EM++ ++ P++ + H V+ LK + L+ + + D KN HR V Sbjct: 654 AEMHF-QKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASV 712 Query: 210 IQEFRLWDNELQYVDQL 226 + + + LQ +++L Sbjct: 713 LFANEKYKSALQELEEL 729 >3J9M-A1 nrPDB Length = 323 Score = 35.1 bits (79), Expect = 0.057, Method: Composition-based stats. Identities = 48/251 (19%), Positives = 89/251 (35%), Gaps = 30/251 (11%) Query: 2 AATEGVGESAPGGEPGQPEQPPPPPPPP--PAQQPQEEEMAAEAGEAAASPMDDGFLSLD 59 A + V + P P PE+ P PP A P+ E+MA + + P+ F Sbjct: 21 AFSTAVYSATPVPTPSLPERTPGNERPPRRKALPPRTEKMAVDQDWPSVYPVAAPF---- 76 Query: 60 SPTYVLYRDRAEWADIDPVPQNDGPS-------------PVVQIIYSEKFRDVYDYFRAV 106 P+ V R + VP + PV + E +D + A Sbjct: 77 KPSAVPLPVRMGYPVKKGVPMAKEGNLELLKIPNFLHLTPVAIKKHCEALKDFCTEWPAA 136 Query: 107 LQRDERSERAFKLTRDAIELNAANYTVWHFR------RVLLRSLQKDLQEEMNYIIAIIE 160 L DE+ E+ F + D+ + ++ +V + R RV L SL D + I + E Sbjct: 137 LDSDEKCEKHFPIEIDSTDYVSSGPSVRNPRARVVVLRVKLSSLNLDDHAKKKLIKLVGE 196 Query: 161 EQPKNYQVWHHRRVLVEWLKDPSQELEFIADILNQDAKNYHAWQHRQWVIQEFRLWDNEL 220 K V + ++ + P + + + + +W +W + E Sbjct: 197 RYCKTTDV-----LTIKTDRCPLRRQNYDYAVYLLTVLYHESWNTEEWEKSKTEADMEEY 251 Query: 221 QYVDQLLKEDV 231 + + + ++ Sbjct: 252 IWENSSSERNI 262 >5WC4-A nrPDB Length = 390 Score = 33.2 bits (74), Expect = 0.20, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%) Query: 80 QNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAANYT 132 Q D P + ++ +E D+ + F + ++ +R LT + ++ N YT Sbjct: 30 QKDYPDFLFRVTKNEHRTDLREKFDRICEKSRTKKRYLHLTEEMLKANPNIYT 82 >5J8N-A nrPDB Length = 258 Score = 33.2 bits (74), Expect = 0.21, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 23/47 (48%) Query: 191 DILNQDAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVW 237 + N + NY W +R W + +V + L+E+V++ S++ Sbjct: 194 RMFNPEGGNYSWWSYRTGARSRNVGWRLDYVFVSENLRENVKSASIY 240 >5ZLM-A nrPDB Length = 513 Score = 32.4 bits (72), Expect = 0.31, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 24/58 (41%), Gaps = 10/58 (17%) Query: 15 EPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDSPTYVLYRDRAEW 72 E G+ P PPPP+++ ++ + A AGE + T+ Y R W Sbjct: 443 ESGELSYTGPAVPPPPSEKGWKDTIQAHAGEVLRI----------AATFGPYSGRYVW 490 >2WW2-A nrPDB Length = 737 Score = 31.7 bits (70), Expect = 0.50, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 13/139 (9%) Query: 147 DLQEEMNYII--AIIEEQPKNYQVWHHRRVLVEWLKDPSQELEFIADILNQDAKNYHAWQ 204 + +++ Y+ + E K + + + + + + + IAD Q A NY Sbjct: 428 EYYDKLGYVPYPEVPEATAKTLE-YAYADWCIARFAESLGKQD-IADQYYQKAPNYRNLY 485 Query: 205 HRQ----WVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTGYSDRAVLEREV 260 + + W W + + S W+ V + G S+ + Sbjct: 486 YPEHGFMWTKDAKGNWRDRFDATE--WGGPFTEGSSWHWTWSVFHDPEGLSELMGGHEPM 543 Query: 261 QYTLEMIKLVPHNESAWNY 279 L+ + + P+ +NY Sbjct: 544 IARLDSMFVAPN---TYNY 559 >6GAZ-Ao nrPDB Length = 692 Score = 31.7 bits (70), Expect = 0.53, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 258 REVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLLDLQPSHSSPYLIAFLVD 317 + Y + + AW L + + R LLN+ LD + SSP LV Sbjct: 577 SSLNYVAVLFLRAGRTQEAWKMLGLFRKHNKIPR-AELLNEFLDSAKASSSPAQAIELVK 635 Query: 318 IYEDMLENQCDNKEDIL 334 + C+ + Sbjct: 636 LASAFSLPVCEGLTRRV 652 >6GAW-Ao nrPDB Length = 692 Score = 31.7 bits (70), Expect = 0.57, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 26/77 (33%), Gaps = 1/77 (1%) Query: 258 REVQYTLEMIKLVPHNESAWNYLKGILQDRGLSRYPNLLNQLLDLQPSHSSPYLIAFLVD 317 + Y + + AW L + + R LLN+ LD + SSP LV Sbjct: 577 SSLNYVAVLFLRAGRTQEAWKMLGLFRKHNKIPR-AELLNEFLDSAKASSSPAQAIELVK 635 Query: 318 IYEDMLENQCDNKEDIL 334 + C+ + Sbjct: 636 LASAFSLPVCEGLTRRV 652 >4WUM-A nrPDB Length = 389 Score = 31.7 bits (70), Expect = 0.58, Method: Composition-based stats. Identities = 10/51 (19%), Positives = 25/51 (49%) Query: 78 VPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 + Q++ P ++ SE ++ + F+ + ++ +R LT D ++ N Sbjct: 31 IEQSEYPDYYFRVTNSEDKVELKEKFKRMCEKSMIKKRYLYLTEDILKENP 81 >6MZC-I nrPDB Length = 677 Score = 31.7 bits (70), Expect = 0.58, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 19/42 (45%) Query: 10 SAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPM 51 S G +P PE PPP P + E +A+ G+ P+ Sbjct: 137 SIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKPGQEEDGPL 178 >2GWR-A nrPDB Length = 238 Score = 31.7 bits (70), Expect = 0.59, Method: Composition-based stats. Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 8/59 (13%) Query: 225 QLLKEDVRNNSVWNQRHFVISNTTGYSDRAVLEREVQYTLEMIKLVPHNESAWNYLKGI 283 Q+ DV VW RH +D ++ VQ ++ P N + ++G+ Sbjct: 171 QVFTRDVLLEQVWGYRH--------PADTRLVNVHVQRLRAKVEKDPENPTVVLTVRGV 221 >4YJY-A nrPDB Length = 398 Score = 31.3 bits (69), Expect = 0.69, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 24/51 (47%) Query: 78 VPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 V Q D P +I SE ++ + F+ + + + +R LT + ++ N Sbjct: 34 VYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENP 84 >6CGR-k nrPDB Length = 703 Score = 31.3 bits (69), Expect = 0.72, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 8/51 (15%) Query: 6 GVGESA-PGGEP------GQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAAS 49 G+GESA P +P G P PP P P EE++ A G+ A+ Sbjct: 199 GLGESASPRPQPLARPHAGAPADPPIVGASDPPISP-EEQLTAPGGDTTAA 248 >1XET-A nrPDB Length = 413 Score = 31.3 bits (69), Expect = 0.72, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 24/52 (46%) Query: 78 VPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNAA 129 V Q+ P +I +E ++ D F+ + +R +R LT + ++ N Sbjct: 53 VDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPD 104 >4I80-A nrPDB Length = 550 Score = 31.3 bits (69), Expect = 0.73, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 4/56 (7%) Query: 7 VGESAPGGEPGQPEQPPPPPPPPPAQQP----QEEEMAAEAGEAAASPMDDGFLSL 58 V +A G E G Q P P PP + P Q E+M A+ ++ + L Sbjct: 462 VAGTARGPEGGSTAQVPAPTASPPPEGPVLTFQSEKMKGMKELLVATKINSSAIKL 517 >4AXG-A nrPDB Length = 248 Score = 30.9 bits (68), Expect = 0.85, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 22/49 (44%) Query: 1 MAATEGVGESAPGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAAS 49 M E SAP E G+PE P P A+ + +E E GE A + Sbjct: 1 MVVLETEKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKEDPQETGEPAGN 49 >6DXA-A nrPDB Length = 396 Score = 30.9 bits (68), Expect = 0.88, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 23/51 (45%) Query: 78 VPQNDGPSPVVQIIYSEKFRDVYDYFRAVLQRDERSERAFKLTRDAIELNA 128 V Q+ P +I SE ++ + FR + + +R LT + ++ N Sbjct: 36 VDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYMYLTEEILKENP 86 >1UOU-A nrPDB Length = 474 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Query: 11 APGGEPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAASPMDDGFLS 57 APG G+ Q P P P P Q P+ M + G + + + GF++ Sbjct: 8 APGDFSGEGSQGLPDPSPEPKQLPELIRMKRDGGRLSEADI-RGFVA 53 >4UUD-B nrPDB Length = 864 Score = 30.1 bits (66), Expect = 1.7, Method: Composition-based stats. Identities = 12/30 (40%), Positives = 13/30 (43%), Gaps = 2/30 (6%) Query: 13 GGEPGQPEQPPPPPPP--PPAQQPQEEEMA 40 GG P P +P P P PP Q P A Sbjct: 810 GGAPPVPSRPGASPDPFGPPPQVPSRPNRA 839 >5NNP-A nrPDB Length = 745 Score = 29.7 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 51/145 (35%), Gaps = 6/145 (4%) Query: 136 FRRVLLRSLQKDLQEEMNYIIAIIEEQPKNYQVWHHRRVLVEWLKDPSQELEFIADILNQ 195 FR V+ K + + I+++ PK+ + +++ + + L Sbjct: 14 FRTVIRHYEDKQYKRGLKAAEQILKKNPKHGDTMSMKALILNAQGKTEEAFALAKEALTI 73 Query: 196 DAKNYHAWQHRQWVIQEFRLWDNELQYVDQLLKEDVRNNSVWNQRHFVISNTTGYSDRAV 255 D K+Y W + + + +D ++ LK + ++ + QR + Sbjct: 74 DMKSYICWHVYGILYRTNKNFDEAIKAYKFALKLEPESHQI--QRDLAVLQIQMRDYAGY 131 Query: 256 LEREVQYTLEMIKLVPHNESAWNYL 280 ++ + M+K P W L Sbjct: 132 VQSRL----NMLKARPQIRQNWTAL 152 >6AHD-v nrPDB Length = 464 Score = 29.0 bits (63), Expect = 3.7, Method: Composition-based stats. Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%) Query: 4 TEGVGESAPGGEPGQPEQPPPPP--PPPPA 31 T GV APG P P PP P PP Sbjct: 326 TSGVHPPAPGVHPPAPGVHPPAPGVHPPAP 355 Score = 28.6 bits (62), Expect = 4.6, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 3/35 (8%) Query: 4 TEGVGESAPGGEPGQPEQPPPPP---PPPPAQQPQ 35 + GV APG P P P P PP P PQ Sbjct: 369 SAGVHPQAPGVHPAAPAVHPQAPGVHPPAPGMHPQ 403 >4QDM-A nrPDB Length = 355 Score = 28.6 bits (62), Expect = 4.6, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 29/86 (33%), Gaps = 7/86 (8%) Query: 28 PPPAQQPQEEEMAAEAGEAAASPMDDGF-------LSLDSPTYVLYRDRAEWADIDPVPQ 80 PP P + + E +A A + F L S T+ D W D Sbjct: 269 PPRPAFPTYDAIPQERFQAQADRYNQLFELYEELDADLSSVTFWGIADNHTWLDDRAREY 328 Query: 81 NDGPSPVVQIIYSEKFRDVYDYFRAV 106 NDG ++ +R ++R + Sbjct: 329 NDGVGKDAPFVFDPNYRVKPAFWRII 354 >3WEN-A nrPDB Length = 913 Score = 27.8 bits (60), Expect = 7.3, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 48/133 (36%), Gaps = 30/133 (22%) Query: 26 PPPPPAQQPQEEEMAAEAGEAAASPMDDGFLSLDSPT---YVLYRDRAE--WADIDPVPQ 80 P P P QP ++ P D +L T + +YR D P+P Sbjct: 130 PKPIPQNQPTTTVLS--------HPHSDLVFTLFHTTPFGFTIYRKSTHDVLFDATPIPS 181 Query: 81 NDGPSPVVQIIYSEKFRDVYDYFRA----VLQRDERSERAFKLTRDAIELNAANYTVWHF 136 N P +IY +++ + A + E ++ F+L + I T+W+ Sbjct: 182 N----PTTFLIYKDQYLQLSSSLPAQQAHLYGLGEHTKPTFQLAHNQI------LTLWNA 231 Query: 137 RRVLLRSLQKDLQ 149 + S +DL Sbjct: 232 D---IASFNRDLN 241 >6AHR-F nrPDB Length = 199 Score = 27.8 bits (60), Expect = 8.8, Method: Composition-based stats. Identities = 13/34 (38%), Positives = 15/34 (44%) Query: 15 EPGQPEQPPPPPPPPPAQQPQEEEMAAEAGEAAA 48 +P QP PP P P P+ P GE AA Sbjct: 145 DPRQPGYQPPNPHPGPSSPPAAPASKRSLGEPAA 178 >3AJA-A nrPDB Length = 302 Score = 27.4 bits (59), Expect = 9.6, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 24/117 (20%) Query: 16 PGQPEQPPPPPPPPPA-------QQPQEEEMAAEA---------GEAAASPMDDGFLSLD 59 P P PPP PP ++P+ E +A+ G +SP DD F Sbjct: 4 PDTPATPPPSAEPPGGVVVPPGTRKPRPEFQSADCPDVMMVSIPGTWESSPTDDPF---- 59 Query: 60 SPTYVLYRDRAEWADIDPVPQNDGPS--PVVQIIYSEKFRDVYDYFRAVLQRDERSE 114 +PT + + P+ + GP V Y+ +F + + + + D R+E Sbjct: 60 NPTQFPLSLMSNIS--KPLAEQFGPDRLQVYTTPYTAQFHNPFAADKQMSYNDSRAE 114 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.301 0.127 0.353 Lambda K H 0.267 0.0388 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,629,261 Number of Sequences: 36641 Number of extensions: 585951 Number of successful extensions: 4604 Number of sequences better than 10.0: 111 Number of HSP's better than 10.0 without gapping: 134 Number of HSP's successfully gapped in prelim test: 55 Number of HSP's that attempted gapping in prelim test: 2958 Number of HSP's gapped (non-prelim): 915 length of query: 377 length of database: 10,336,785 effective HSP length: 99 effective length of query: 278 effective length of database: 6,709,326 effective search space: 1865192628 effective search space used: 1865192628 T: 11 A: 40 X1: 16 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.8 bits) S2: 60 (27.8 bits)