BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q04432 (237 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1QVW-A nrPDB 475 e-135 3KKL-A nrPDB 342 8e-95 4LRU-A nrPDB 309 7e-85 5JZM-A nrPDB 50 7e-07 1N57-A nrPDB 49 2e-06 5XR3-A nrPDB 48 3e-06 4OFW-A nrPDB 37 0.007 5OF3-B nrPDB 35 0.039 1G2I-A nrPDB 32 0.19 3R20-A nrPDB 32 0.34 4HSO-A nrPDB 28 2.6 1Y79-1 nrPDB 28 3.2 6BA0-A nrPDB 28 3.4 4MVJ-P nrPDB 27 5.3 5X9Q-A nrPDB 27 5.5 3KN6-A nrPDB 27 5.9 3FR8-A nrPDB 27 6.7 >1QVW-A nrPDB Length = 237 Score = 475 bits (1223), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/237 (98%), Positives = 235/237 (99%) Query: 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 MAPKKVLLALTSYNDVFYSDG KTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS Sbjct: 1 MAPKKVLLALTSYNDVFYSDGMKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 Query: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDL 120 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIF ASAGHGTLFDYPKAKDL Sbjct: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFMASAGHGTLFDYPKAKDL 120 Query: 121 QDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILK 180 QDIASEIYANGGVVAAVCHGPA+FDGLTDKKTGRPLIEGKSITGFTDVGETI+GVDSILK Sbjct: 121 QDIASEIYANGGVVAAVCHGPAMFDGLTDKKTGRPLIEGKSITGFTDVGETIMGVDSILK 180 Query: 181 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN Sbjct: 181 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 >3KKL-A nrPDB Length = 244 Score = 342 bits (877), Expect = 8e-95, Method: Compositional matrix adjust. Identities = 163/235 (69%), Positives = 193/235 (82%) Query: 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 M PK+ L++LTSY+ FY DGAKTGVFVVE L F+TF K GFEVDFVSETG FGWDEH Sbjct: 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHY 60 Query: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDL 120 L K F+ G+D+ +F+ K+S FNK LA+IKT EVNA DY++FFASAGHG LFDYPKAK+L Sbjct: 61 LPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNL 120 Query: 121 QDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILK 180 QDIAS+IYANGGV+AA+CHGP +FDGL D KT RPLIEGK+ITGF GE LGVD IL+ Sbjct: 121 QDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILR 180 Query: 181 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDAL 235 ++ L TVE VA K GAKYLAP+ PWDDYSITDG+LVTGVN S++ST +R+I+AL Sbjct: 181 SRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINAL 235 >4LRU-A nrPDB Length = 239 Score = 309 bits (792), Expect = 7e-85, Method: Compositional matrix adjust. Identities = 147/232 (63%), Positives = 179/232 (77%) Query: 5 KVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKD 64 KVLLALTSYN+ FYSDG KTGVFVVEALHPF FRK+G+E+ SETG FGWD+HS+ D Sbjct: 6 KVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPD 65 Query: 65 FLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIA 124 FLNG+D+ F N +S+FN L +K +++ +DY IFF SAGHGTLFDYP AKDLQ IA Sbjct: 66 FLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 125 Query: 125 SEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNL 184 + +Y GGVV+AVCHGPAIF+ L D KTG PLI+GK ITGFTD+GE ILGV I+K NL Sbjct: 126 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNL 185 Query: 185 ATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALK 236 T++ VA+K GA Y+ P GPWD++++TDGR+VTGVNP SA TA I A + Sbjct: 186 LTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFE 237 >5JZM-A nrPDB Length = 288 Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust. Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 19/160 (11%) Query: 14 NDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETG---KFGWDEHSLAKDFLNGQD 70 N F+S TG VE L P K GF D + +G KF W +NG Sbjct: 69 NGTFFS----TGNHPVETLLPMYHLDKAGFSFDIATLSGNPVKFEWWAMPREDQEVNGL- 123 Query: 71 ETDFKNKDSDFNKTLAKIKTPKEVNA---DDYQIFFASAGHGTLFDYPKAKDLQDIASEI 127 + S F + L K+ E DY F GHG L P +++++ + Sbjct: 124 ---YSKYQSSFRQPL-KLSDVIETALGEDSDYIGVFIPGGHGALMGLPDSQEVKAVLQWA 179 Query: 128 YANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTD 167 + ++CHGPA F + D PL G I F D Sbjct: 180 MKQNKFIISLCHGPAAFLAVGDD----PLFAGYKIVAFPD 215 >1N57-A nrPDB Length = 291 Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 46/157 (29%), Positives = 67/157 (42%), Gaps = 23/157 (14%) Query: 24 TGVFVVEALHPFNTFRKEGFEVDFVSETG---KFGW------DEHSLAKDFLNGQDETDF 74 TG +E L P GFE + + +G KF + DE + F Q ++ F Sbjct: 71 TGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAMPHKDEKVMP--FFE-QHKSLF 127 Query: 75 KNKDSDFNKTLAKIKTPKEVNAD-DYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGV 133 +N K LA + +NAD +Y F GHG L P+++D+ N Sbjct: 128 RNP-----KKLADVVA--SLNADSEYAAIFVPGGHGALIGLPESQDVAAALQWAIKNDRF 180 Query: 134 VAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGE 170 V ++CHGPA F L + G + G SI F D + Sbjct: 181 VISLCHGPAAFLAL---RHGDNPLNGYSICAFPDAAD 214 >5XR3-A nrPDB Length = 300 Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 29/248 (11%) Query: 5 KVLLALTSYNDVFYSDGA--KTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLA 62 KVL+ V +G TG VE L P + + GF+VD + +G L Sbjct: 54 KVLMIAAEERYVLLENGKMFSTGNHPVEMLLPLHHLMEAGFDVDVATLSGY----PVKLE 109 Query: 63 KDFLNGQDETDFKNKDSDFNKTLAKIKTPK--------EVNAD-DYQIFFASAGHGTLFD 113 + +DE S +NK K+K PK E+ D DY F GH + Sbjct: 110 LWAMPTEDEAVI----STYNKLKEKLKQPKKLADVIKNELGPDSDYLSVFIPGGHAAVVG 165 Query: 114 YPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETIL 173 +++D+Q N + + HGPA + PL EG S+ F D + Sbjct: 166 ISESEDVQQTLDWALDNDRFIVTLXHGPAALLSAGLNREKSPL-EGYSVCVFPDSLDEGA 224 Query: 174 GVD-SILKAKNLATVEDVAKKYGAKYLAPVGPWDDY---SITDGRLVTGVNPASAHSTAV 229 ++ L + V D+ K G K + DD ++ D +L+TG +P +++ Sbjct: 225 NIEIGYLPGRLKWLVADLLTKQGLKVVN-----DDMTGRTLKDRKLLTGDSPLASNELGK 279 Query: 230 RSIDALKN 237 +++ + N Sbjct: 280 LAVNEMLN 287 >4OFW-A nrPDB Length = 387 Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust. Identities = 39/188 (20%), Positives = 65/188 (34%), Gaps = 35/188 (18%) Query: 30 EALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIK 89 E + PF + G V V K G + DF Q + + + N T Sbjct: 17 EVMVPFQALQAFGITVHTVCPGKKAGDSCPTAVHDFCGHQTYFESRGHNFTLNATF---- 72 Query: 90 TPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTD 149 EV+ Y G + A + ++ E +G +A++CHG I Sbjct: 73 --DEVDLSKYDGLVIPGGRAPEYLALTA-SVVELVKEFSRSGKPIASICHGQLIL----- 124 Query: 150 KKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYS 209 + G+ T + VG +++ GAK++ P+ P D Sbjct: 125 --AAADTVNGRKCTAYATVGPSLVAA-------------------GAKWVEPITP--DVC 161 Query: 210 ITDGRLVT 217 + DG L+T Sbjct: 162 VVDGSLIT 169 >5OF3-B nrPDB Length = 307 Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust. Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 5/64 (7%) Query: 141 PAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDVAKKY----GA 196 P I + L +K I IT + D+G+ + G+ SI+K N++ VED+ +KY G Sbjct: 215 PCIENILAKEKLNEEEIRT-LITFYIDIGKGLSGIVSIMKKYNVSNVEDLYRKYRGDKGT 273 Query: 197 KYLA 200 +Y+ Sbjct: 274 RYIV 277 >1G2I-A nrPDB Length = 166 Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust. Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 31/120 (25%) Query: 29 VEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKI 88 VE ++P++ ++EG EV S + + G+ K D F+K Sbjct: 14 VELIYPYHRLKEEGHEVYIAS-----------FERGTITGKHGYSVK-VDLTFDK----- 56 Query: 89 KTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQD----IASEIYANGGVVAAVCHGPAIF 144 VN +++ G P+ L + IA ++++ G VA++CHGP I Sbjct: 57 -----VNPEEFDALVLPGGRA-----PERVRLNEKAVSIARKMFSEGKPVASICHGPQIL 106 >3R20-A nrPDB Length = 233 Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 16/97 (16%) Query: 121 QDIASEIYANG--GVVAAVCHGPAIFDGLTDKKT------GRPLIEGKSITGFTDVGETI 172 +D++SEI + G V+AV PA+ L D + GR ++EG+ D+G + Sbjct: 89 EDVSSEIRGDAVTGAVSAVSAVPAVRTRLVDIQRKLATEGGRVVVEGR------DIGTVV 142 Query: 173 LGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYS 209 L D+ +K A+ E+ A++ A+ +A G DDY+ Sbjct: 143 LP-DADVKIFLTASAEERARRRNAQNVAN-GLPDDYA 177 >4HSO-A nrPDB Length = 351 Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 5/52 (9%) Query: 113 DYPKAKDL-QDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSIT 163 DY + ++ QDIA+++ +GG + V + +G DK P + GKSIT Sbjct: 276 DYTRQMEVAQDIAAQLEQDGGNIMGVMVESHLVEGRQDK----PEVYGKSIT 323 >1Y79-1 nrPDB Length = 680 Score = 28.1 bits (61), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Query: 80 DFNKTLAKIKTPKEVNADDYQIFFA-SAGHGT----LFDYPKAKDLQDIASEIYANGGVV 134 DFN T+ ++ E+ +FFA +A H D + +L ++A++IY NG + Sbjct: 53 DFNNTILALEQSGELLTRVTSVFFAMTAAHTNDELQRLDEQFSAELAELANDIYLNGELF 112 Query: 135 AAV 137 A V Sbjct: 113 ARV 115 >6BA0-A nrPDB Length = 315 Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 18/34 (52%) Query: 134 VAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTD 167 VAA HG DG+T + RPL EG ++ D Sbjct: 79 VAAAVHGETGLDGVTLPEPTRPLDEGHAVNWIID 112 >4MVJ-P nrPDB Length = 355 Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust. Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 10/77 (12%) Query: 139 HGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETIL-----GVDSILKAKNLATVEDVAKK 193 HG FDG + K G ++ GK I + L GVD + +A L ++ A+K Sbjct: 75 HGR--FDGTVEVKDGHLIVNGKKIRVTAERDPANLKWDEVGVDVVAEATGLFLTDETARK 132 Query: 194 Y---GAKYLAPVGPWDD 207 + GAK + GP D Sbjct: 133 HITAGAKKVVMTGPSKD 149 >5X9Q-A nrPDB Length = 173 Score = 27.3 bits (59), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%) Query: 4 KKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKF-GWDEHSLA 62 + LLA D KT V ++EA+HP + +++D + E+ GW +LA Sbjct: 93 RMALLAALECVDWVVGFDEKTPVSLIEAVHPDILVKGGDYDMDALPESALVRGWGGRALA 152 Query: 63 KDFLNGQDETDFKNK 77 F + + T K Sbjct: 153 IPFEHDRSTTALLKK 167 >3KN6-A nrPDB Length = 325 Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust. Identities = 11/29 (37%), Positives = 15/29 (51%) Query: 15 DVFYSDGAKTGVFVVEALHPFNTFRKEGF 43 D+ S GA V H FN +++EGF Sbjct: 289 DILGSSGAAVHTCVKATFHAFNKYKREGF 317 >3FR8-A nrPDB Length = 525 Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust. Identities = 17/57 (29%), Positives = 28/57 (49%) Query: 29 VEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTL 85 V++L+PF R F VD S T + G + + D++ Q +KD+ N+ L Sbjct: 427 VDSLNPFMHARGVAFMVDNCSTTARLGSRKWAPRFDYILTQQAFVTVDKDAPINQDL 483 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1QVW-A nrPDB 357 2e-99 3KKL-A nrPDB 337 2e-93 4LRU-A nrPDB 321 1e-88 5XR3-A nrPDB 245 1e-65 5JZM-A nrPDB 207 3e-54 1N57-A nrPDB 203 7e-53 Sequences not found previously or not previously below threshold: 1PDW-A nrPDB 54 7e-08 1G2I-A nrPDB 49 2e-06 4OFW-A nrPDB 47 8e-06 3L18-A nrPDB 42 2e-04 4E08-A nrPDB 40 0.001 1OI4-A nrPDB 35 0.027 5SY4-A nrPDB 35 0.035 2VRN-A nrPDB 35 0.039 3OT1-B nrPDB 33 0.14 3EDF-A nrPDB 32 0.31 6FBA-A nrPDB 30 0.97 6HUL-B nrPDB 29 1.7 4OAQ-A nrPDB 29 2.0 2Y1V-A nrPDB 29 2.5 6GUA-A nrPDB 28 3.0 5NB0-A nrPDB 28 3.4 6BA0-A nrPDB 28 3.6 6MSN-A nrPDB 28 4.5 3B55-A nrPDB 27 5.3 4OKD-A nrPDB 27 5.7 4PSX-B nrPDB 27 8.7 >1QVW-A nrPDB Length = 237 Score = 357 bits (916), Expect = 2e-99, Method: Composition-based stats. Identities = 233/237 (98%), Positives = 235/237 (99%) Query: 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 MAPKKVLLALTSYNDVFYSDG KTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS Sbjct: 1 MAPKKVLLALTSYNDVFYSDGMKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 Query: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDL 120 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIF ASAGHGTLFDYPKAKDL Sbjct: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFMASAGHGTLFDYPKAKDL 120 Query: 121 QDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILK 180 QDIASEIYANGGVVAAVCHGPA+FDGLTDKKTGRPLIEGKSITGFTDVGETI+GVDSILK Sbjct: 121 QDIASEIYANGGVVAAVCHGPAMFDGLTDKKTGRPLIEGKSITGFTDVGETIMGVDSILK 180 Query: 181 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN Sbjct: 181 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 >3KKL-A nrPDB Length = 244 Score = 337 bits (864), Expect = 2e-93, Method: Composition-based stats. Identities = 163/235 (69%), Positives = 193/235 (82%) Query: 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 M PK+ L++LTSY+ FY DGAKTGVFVVE L F+TF K GFEVDFVSETG FGWDEH Sbjct: 1 MTPKRALISLTSYHGPFYKDGAKTGVFVVEILRSFDTFEKHGFEVDFVSETGGFGWDEHY 60 Query: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDL 120 L K F+ G+D+ +F+ K+S FNK LA+IKT EVNA DY++FFASAGHG LFDYPKAK+L Sbjct: 61 LPKSFIGGEDKMNFETKNSAFNKALARIKTANEVNASDYKVFFASAGHGALFDYPKAKNL 120 Query: 121 QDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILK 180 QDIAS+IYANGGV+AA+CHGP +FDGL D KT RPLIEGK+ITGF GE LGVD IL+ Sbjct: 121 QDIASKIYANGGVIAAICHGPLLFDGLIDIKTTRPLIEGKAITGFPLEGEIALGVDDILR 180 Query: 181 AKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDAL 235 ++ L TVE VA K GAKYLAP+ PWDDYSITDG+LVTGVN S++ST +R+I+AL Sbjct: 181 SRKLTTVERVANKNGAKYLAPIHPWDDYSITDGKLVTGVNANSSYSTTIRAINAL 235 >4LRU-A nrPDB Length = 239 Score = 321 bits (823), Expect = 1e-88, Method: Composition-based stats. Identities = 147/232 (63%), Positives = 179/232 (77%) Query: 5 KVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKD 64 KVLLALTSYN+ FYSDG KTGVFVVEALHPF FRK+G+E+ SETG FGWD+HS+ D Sbjct: 6 KVLLALTSYNETFYSDGKKTGVFVVEALHPFEVFRKKGYEIQLASETGTFGWDDHSVVPD 65 Query: 65 FLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIA 124 FLNG+D+ F N +S+FN L +K +++ +DY IFF SAGHGTLFDYP AKDLQ IA Sbjct: 66 FLNGEDKEIFDNVNSEFNVALKNLKKASDLDPNDYDIFFGSAGHGTLFDYPNAKDLQKIA 125 Query: 125 SEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNL 184 + +Y GGVV+AVCHGPAIF+ L D KTG PLI+GK ITGFTD+GE ILGV I+K NL Sbjct: 126 TTVYDKGGVVSAVCHGPAIFENLNDPKTGEPLIKGKKITGFTDIGEDILGVTDIMKKGNL 185 Query: 185 ATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALK 236 T++ VA+K GA Y+ P GPWD++++TDGR+VTGVNP SA TA I A + Sbjct: 186 LTIKQVAEKEGATYIEPEGPWDNFTVTDGRIVTGVNPQSAVKTAEDVIAAFE 237 >5XR3-A nrPDB Length = 300 Score = 245 bits (626), Expect = 1e-65, Method: Composition-based stats. Identities = 61/248 (24%), Positives = 100/248 (40%), Gaps = 29/248 (11%) Query: 5 KVLLALTSYNDVFYSDGA--KTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLA 62 KVL+ V +G TG VE L P + + GF+VD + +G L Sbjct: 54 KVLMIAAEERYVLLENGKMFSTGNHPVEMLLPLHHLMEAGFDVDVATLSGY----PVKLE 109 Query: 63 KDFLNGQDETDFKNKDSDFNKTLAKIKTPK--------EVNAD-DYQIFFASAGHGTLFD 113 + +DE S +NK K+K PK E+ D DY F GH + Sbjct: 110 LWAMPTEDEAVI----STYNKLKEKLKQPKKLADVIKNELGPDSDYLSVFIPGGHAAVVG 165 Query: 114 YPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETIL 173 +++D+Q N + + HGPA + PL EG S+ F D + Sbjct: 166 ISESEDVQQTLDWALDNDRFIVTLXHGPAALLSAGLNREKSPL-EGYSVCVFPDSLDEGA 224 Query: 174 GVD-SILKAKNLATVEDVAKKYGAKYLAPVGPWDDY---SITDGRLVTGVNPASAHSTAV 229 ++ L + V D+ K G K + DD ++ D +L+TG +P +++ Sbjct: 225 NIEIGYLPGRLKWLVADLLTKQGLKVVN-----DDMTGRTLKDRKLLTGDSPLASNELGK 279 Query: 230 RSIDALKN 237 +++ + N Sbjct: 280 LAVNEMLN 287 >5JZM-A nrPDB Length = 288 Score = 207 bits (527), Expect = 3e-54, Method: Composition-based stats. Identities = 53/240 (22%), Positives = 87/240 (36%), Gaps = 19/240 (7%) Query: 5 KVLLALTSYNDVFYSDGA--KTGVFVVEALHPFNTFRKEGFEVDFVSETG---KFGWDEH 59 K+L+ + +G TG VE L P K GF D + +G KF W Sbjct: 54 KILVVGADERYLMMDNGTFFSTGNHPVETLLPMYHLDKAGFSFDIATLSGNPVKFEWWAM 113 Query: 60 SLAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNA---DDYQIFFASAGHGTLFDYPK 116 +NG + S F + L K+ E DY F GHG L P Sbjct: 114 PREDQEVNG----LYSKYQSSFRQPL-KLSDVIETALGEDSDYIGVFIPGGHGALMGLPD 168 Query: 117 AKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVD 176 +++++ + + ++CHGPA F + D PL G I F D + Sbjct: 169 SQEVKAVLQWAMKQNKFIISLCHGPAAFLAVGD----DPLFAGYKIVAFPDEMDAQTPSI 224 Query: 177 SILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALK 236 + + + G + L + D +++TG +P + ++ + AL Sbjct: 225 GYMPGHLTWKFGEQLQAIGFELLNTGISGQVF--QDRKMLTGDSPLAGNALGQLAAKALL 282 >1N57-A nrPDB Length = 291 Score = 203 bits (515), Expect = 7e-53, Method: Composition-based stats. Identities = 58/245 (23%), Positives = 95/245 (38%), Gaps = 29/245 (11%) Query: 5 KVLLALTSYNDVFYSDGA--KTGVFVVEALHPFNTFRKEGFEVDFVSETG---KFGWDEH 59 K+L+ + +G TG +E L P GFE + + +G KF + Sbjct: 50 KILVIAADERYLPTDNGKLFSTGNHPIETLLPLYHLHAAGFEFEVATISGLMTKFEYWAM 109 Query: 60 SLAKD----FLNGQDETDFKNKDSDFNKTLAKIKTPKEVNAD-DYQIFFASAGHGTLFDY 114 + F Q ++ F+N K LA + +NAD +Y F GHG L Sbjct: 110 PHKDEKVMPFFE-QHKSLFRNP-----KKLADVVA--SLNADSEYAAIFVPGGHGALIGL 161 Query: 115 PKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILG 174 P+++D+ N V ++CHGPA F L + G + G SI F D + Sbjct: 162 PESQDVAAALQWAIKNDRFVISLCHGPAAFLAL---RHGDNPLNGYSICAFPDAADKQTP 218 Query: 175 VDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYS---ITDGRLVTGVNPASAHSTAVRS 231 + + KK G + DD + D +L+TG +P +A++ + Sbjct: 219 EIGYMPGHLTWYFGEELKKMGMNIIN-----DDITGRVHKDRKLLTGDSPFAANALGKLA 273 Query: 232 IDALK 236 + Sbjct: 274 AQEML 278 >1PDW-A nrPDB Length = 197 Score = 53.6 bits (127), Expect = 7e-08, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 61/168 (36%), Gaps = 36/168 (21%) Query: 1 MAPKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHS 60 MA K+ L+ L G +E + P + R+ G +V GK D Sbjct: 1 MASKRALVILAK------------GAEEMETVIPVDVMRRAGIKVTVAGLAGK---DPVQ 45 Query: 61 LAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDL 120 ++D + D A ++ K+ Y + G+ + ++ + Sbjct: 46 CSRDVVICPD---------------ASLEDAKKEGP--YDVVVLPGGNLGAQNLSESAAV 88 Query: 121 QDIASEIYANGGVVAAVCHGPAIFD----GLTDKKTGRPLIEGKSITG 164 ++I E G++AA+C GP G K T PL + K + G Sbjct: 89 KEILKEQENRKGLIAAICAGPTALLAHEIGFGSKVTTHPLAKDKMMNG 136 >1G2I-A nrPDB Length = 166 Score = 49.0 bits (115), Expect = 2e-06, Method: Composition-based stats. Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 48/155 (30%) Query: 29 VEALHPFNTFRKEGFEVDFV-----SETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNK 83 VE ++P++ ++EG EV + TGK G+ D F+K Sbjct: 14 VELIYPYHRLKEEGHEVYIASFERGTITGKHGYS-----------------VKVDLTFDK 56 Query: 84 TLAKIKTPKEVNADDYQIFFASAGHGTLFDYPK----AKDLQDIASEIYANGGVVAAVCH 139 VN +++ G P+ + IA ++++ G VA++CH Sbjct: 57 ----------VNPEEFDALVLPGGRA-----PERVRLNEKAVSIARKMFSEGKPVASICH 101 Query: 140 GPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILG 174 GP I ++ G+ T + + + ++ Sbjct: 102 GPQILISAG-------VLRGRKGTSYPGIKDDMIN 129 >4OFW-A nrPDB Length = 387 Score = 46.7 bits (109), Expect = 8e-06, Method: Composition-based stats. Identities = 43/206 (20%), Positives = 68/206 (33%), Gaps = 35/206 (16%) Query: 30 EALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIK 89 E + PF + G V V GK D A G +T F+++ +F Sbjct: 17 EVMVPFQALQAFGITVHTVC-PGKKAGDSCPTAVHDFCG-HQTYFESRGHNFTLN----A 70 Query: 90 TPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTD 149 T EV+ Y G + + ++ E +G +A++CHG I Sbjct: 71 TFDEVDLSKYDGLVIPGGRAPEY-LALTASVVELVKEFSRSGKPIASICHGQLILAAADT 129 Query: 150 KKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYS 209 + G+ T + ATV GAK++ P+ P D Sbjct: 130 -------VNGRKCTAY-------------------ATVGPSLVAAGAKWVEPITP--DVC 161 Query: 210 ITDGRLVTGVNPASAHSTAVRSIDAL 235 + DG L+T + AL Sbjct: 162 VVDGSLITAATYEGHPEFIQLFVKAL 187 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 64/190 (33%), Gaps = 37/190 (19%) Query: 30 EALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIK 89 E PF + + G +VD V K G + A G D+T + F A Sbjct: 210 EVKVPFQSLQALGCQVDAVCPEKKAG-ERCPTAIHDFEG-DQTYSEKPGHTF----ALTT 263 Query: 90 TPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTD 149 ++ + Y G + + + +I E + VA++CHG I Sbjct: 264 NFDDLVSSSYDALVIPGGRAPEY-LALNEHVLNIVKEFMNSEKPVASICHGQQILAAAG- 321 Query: 150 KKTGRPLIEGKSITGFTDV-GETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDY 208 +++G+ T + V +LG G +L P D Sbjct: 322 ------VLKGRKCTAYPAVKLNVVLG--------------------GGTWLEPDPI--DR 353 Query: 209 SITDGRLVTG 218 TDG LVTG Sbjct: 354 CFTDGNLVTG 363 >3L18-A nrPDB Length = 168 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 33/135 (24%) Query: 25 GVFVVEALHPFNTFRKEGFEVDFVS-----ETGKFGWDEHSLAKDFLNGQDETDFKNKDS 79 G +E ++P + ++EG EV S TGK G+ N D Sbjct: 12 GFEDLELIYPLHRIKEEGHEVYVASFQRGKITGKHGYS-----------------VNVDL 54 Query: 80 DFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCH 139 F +EV+ D++ G K + I ++ + VA++CH Sbjct: 55 TF----------EEVDPDEFDALVLPGGKAPEIVRLNEKAVM-ITRRMFEDDKPVASICH 103 Query: 140 GPAIFDGLTDKKTGR 154 GP I K R Sbjct: 104 GPQILISAKVLKGRR 118 >4E08-A nrPDB Length = 190 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 53/211 (25%) Query: 25 GVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKT 84 G +E + + R+ G +V G G+ ++ + + Sbjct: 15 GAEEMEFIIAADVLRRAGIKVTVAGLNG---------------GEAVKCSRDVQILPDTS 59 Query: 85 LAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIF 144 LA +V +D + + G G ++ + D+ + GG++AA+C P + Sbjct: 60 LA------QVASDKFDVVVLPGGLGGSNAMGESSLVGDLLRSQESGGGLIAAICAAPTVL 113 Query: 145 DGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGP 204 K G + GKS+T + + ++ S + Sbjct: 114 -----AKHG--VASGKSLTSYPSMKPQLVNNYSYVD------------------------ 142 Query: 205 WDDYSITDGRLVTGVNPASAHSTAVRSIDAL 235 D + DG L+T P +A+ A++ + L Sbjct: 143 -DKTVVKDGNLITSRGPGTAYEFALKIAEEL 172 >1OI4-A nrPDB Length = 193 Score = 35.1 bits (79), Expect = 0.027, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 42/135 (31%), Gaps = 13/135 (9%) Query: 38 FRKEGFEVDFVSE-TGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKI-------- 88 ++K G T +F E + D + K Sbjct: 17 YKKAGLSKKIAVLITDEFEDSEFTSPADEFRKAGHEVITIEKQAGKTVKGKKGEASVTID 76 Query: 89 KTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYAN-GGVVAAVCHGPAIFDGL 147 K+ EV ++ GH DY + + + + N G V A+CHGP + Sbjct: 77 KSIDEVTPAEFDALLLPGGHSP--DYLRGDNRFVTFTRDFVNSGKPVFAICHGPQLLISA 134 Query: 148 TDKKTGRPLIEGKSI 162 + GR L K I Sbjct: 135 DVIR-GRKLTAVKPI 148 >5SY4-A nrPDB Length = 199 Score = 34.7 bits (78), Expect = 0.035, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 8/104 (7%) Query: 93 EVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKT 152 EV +Y + G + + L + + + +G +VAA+C PA D Sbjct: 64 EVADGEYDVIVLPGGIKGAECFRDSTLLVETVKQFHRSGRIVAAICAAPATVLVPHD--- 120 Query: 153 GRPLIEGKSITGFTDVGETILGVDSILKAKNLATVE-DVAKKYG 195 + ++TGF + + I + L + + + G Sbjct: 121 ---IFPIGNMTGFPTLKDKIPA-EQWLDKRVVWDARVKLLTSQG 160 >2VRN-A nrPDB Length = 190 Score = 34.7 bits (78), Expect = 0.039, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 18/51 (35%) Query: 91 PKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGP 141 EV DY G + ++Y G +AA+CHGP Sbjct: 68 VSEVQVSDYDGLLLPGGTVNPDKLRLEEGAMKFVRDMYDAGKPIAAICHGP 118 >3OT1-B nrPDB Length = 208 Score = 32.8 bits (73), Expect = 0.14, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 37/122 (30%), Gaps = 21/122 (17%) Query: 25 GVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKT 84 G +E + +T + GF+V + K Sbjct: 19 GSEEMETVIIVDTLVRAGFQVTMAAVGDKLQ---------------------VQGSRGVW 57 Query: 85 LAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIF 144 L +T + +A+ + G G + + L + G +VAA+C PA+ Sbjct: 58 LTAEQTLEACSAEAFDALALPGGVGGAQAFADSTALLALIDAFSQQGKLVAAICATPALV 117 Query: 145 DG 146 Sbjct: 118 FA 119 >3EDF-A nrPDB Length = 601 Score = 31.7 bits (70), Expect = 0.31, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 8/93 (8%) Query: 125 SEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSILKAKNL 184 I G V H A+ D + +G + G D+ +T V + L N+ Sbjct: 238 DWINYGGKFVPTQHHRVAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNI 297 Query: 185 ATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVT 217 +E A G + D Y +DG +T Sbjct: 298 WWIE-YAGLSGLRI-------DTYGYSDGAFLT 322 >6FBA-A nrPDB Length = 349 Score = 30.1 bits (66), Expect = 0.97, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%) Query: 2 APKKVLLALTSYNDVFYSDGAKTGVFVVEALHPFNTFR 39 + K V +A++S + + G TG ++L F T Sbjct: 126 SKKNVDIAVSSSSKPIINAGNGTGEHPTQSLLDFYTIH 163 >6HUL-B nrPDB Length = 425 Score = 29.0 bits (63), Expect = 1.7, Method: Composition-based stats. Identities = 17/70 (24%), Positives = 22/70 (31%) Query: 18 YSDGAKTGVFVVEALHPFNTFRKEGFEVDFVSETGKFGWDEHSLAKDFLNGQDETDFKNK 77 Y TG + P F KE V+ETG W + T F K Sbjct: 98 YEGATPTGSHKINTAIPQAYFAKEEGIEHVVTETGAGQWGTAVALAASMYNMKSTIFMVK 157 Query: 78 DSDFNKTLAK 87 S K + + Sbjct: 158 VSYEQKPMRR 167 >4OAQ-A nrPDB Length = 367 Score = 29.0 bits (63), Expect = 2.0, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 20/52 (38%) Query: 68 GQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKD 119 G+D+T +KN D F+ L +N +Y P ++D Sbjct: 237 GEDKTWYKNYDDHFDFILNCASGIDGLNLSEYLSTLKVDKKFVSVGLPPSED 288 >2Y1V-A nrPDB Length = 605 Score = 28.6 bits (62), Expect = 2.5, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query: 152 TGRPLIEGKSITGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPWDDYSIT 211 T P + + ++D L + K TV+DVA + G L V D +T Sbjct: 198 TKIPALANYATANWSDRMTEGLAFN---KGTVKVTVDDVALEAGDYALTEVATGFDLKLT 254 Query: 212 DGRLVTGVNPASAHSTAVRSIDALKN 237 D L VN +A T + A N Sbjct: 255 DAGLAK-VNDQNAEKTVKITYSATLN 279 >6GUA-A nrPDB Length = 822 Score = 28.2 bits (61), Expect = 3.0, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 27/59 (45%), Gaps = 3/59 (5%) Query: 82 NKTLAKIKTPKEVNADDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHG 140 K + +E++ ++++ +F +G +F + +DL + + G++ HG Sbjct: 686 QKKKGALNQERELSDEEFEKYFGPSGTPVIFGFHGYEDLIESIFYQRGHDGLIV---HG 741 >5NB0-A nrPDB Length = 230 Score = 28.2 bits (61), Expect = 3.4, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 8/47 (17%) Query: 136 AVCHGPAIFDGLTDKKTGRP--------LIEGKSITGFTDVGETILG 174 VC GPAI + + T P L +G S FT G G Sbjct: 109 TVCEGPAIAIAVHSQTTDIPPCPHGWISLWKGFSFIMFTSAGSEGTG 155 >6BA0-A nrPDB Length = 315 Score = 28.2 bits (61), Expect = 3.6, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 17/29 (58%) Query: 134 VAAVCHGPAIFDGLTDKKTGRPLIEGKSI 162 VAA HG DG+T + RPL EG ++ Sbjct: 79 VAAAVHGETGLDGVTLPEPTRPLDEGHAV 107 >6MSN-A nrPDB Length = 604 Score = 27.8 bits (60), Expect = 4.5, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 23/77 (29%), Gaps = 8/77 (10%) Query: 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPL 156 D Y F S G G+ K + + +GG GPA K L Sbjct: 509 DSYVDLFQSHG-GSYITLAKGNRSKQVTDACKKHGGFYLGSIGGPAAILAKDSIKQVTCL 567 Query: 157 IEGKSITGFTDVGETIL 173 F ++G + Sbjct: 568 -------AFPELGMEAV 577 >3B55-A nrPDB Length = 451 Score = 27.4 bits (59), Expect = 5.3, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 42/119 (35%), Gaps = 8/119 (6%) Query: 119 DLQDIASEIYANGGVVAAVCHGPAIFDGLTDKKTGRPLIEGKSITGFTDVGETILGVDSI 178 + IA + A+ + P L D K + ++ SI G GE G + Sbjct: 38 NTNQIAKWLEAHAKPLKTT--NPTA--SLNDLKPLKNMVGSASIVGL---GEATHGAHEV 90 Query: 179 LKAKNLATVEDVAKKYGAKYLAPVGPWDDYSITDGRLVTGVNPASAHSTAVRSIDALKN 237 K+ V+ + + G L WD D ++TG S H T V + + Sbjct: 91 FTMKHR-IVKYLVSEKGFTNLVLEEGWDRALELDRYVLTGKGNPSQHLTPVFKTKEMLD 148 >4OKD-A nrPDB Length = 840 Score = 27.4 bits (59), Expect = 5.7, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 55/163 (33%), Gaps = 22/163 (13%) Query: 49 SETGKFGWDEHSLAKDFLNGQDETDFKNKDSDFNKTLAKIKTPKEVNADDYQIFFASAGH 108 SE WD+ + N F F + ++ VN D Q H Sbjct: 675 SELNYLRWDQLAEDPHGFN-----RFVRLLIHFRRATPALQRTTFVNDKDIQW------H 723 Query: 109 GTLFDYPKAKDLQDIASEIYANGG-----VVAAVCHGPAIF-DGLTDKKTGRPLIEGKSI 162 G L + P D + + +G V H P + + +PL++ + Sbjct: 724 GELPNTPDWTDTSRLVAFTLHDGKGGGLYVAFNTSHLPKLLQLPKWGGRVWQPLVDTSKV 783 Query: 163 TGFTDVGETILGVDSILKAKNLATVEDVAKKYGAKYLAPVGPW 205 + L VD +L A+++A + A + PV PW Sbjct: 784 APY-----DFLAVDGVLSAEDVAAARRQMAMWTADHTYPVLPW 821 >4PSX-B nrPDB Length = 401 Score = 26.6 bits (57), Expect = 8.7, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 13/95 (13%) Query: 50 ETGKFGWDEHSLAKDFLNGQD--ETDFKNKDSDFNKTLAKIK-----------TPKEVNA 96 E + E +L K+ L+ +D E + S + I+ T Sbjct: 69 EENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMP 128 Query: 97 DDYQIFFASAGHGTLFDYPKAKDLQDIASEIYANG 131 D I G GT F Y +++ LQ NG Sbjct: 129 QDPNIVATINGQGTTFLYSRSEGLQSTLKFHKDNG 163 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.312 0.127 0.330 Lambda K H 0.267 0.0383 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,502,518 Number of Sequences: 36641 Number of extensions: 326883 Number of successful extensions: 983 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 32 Number of HSP's successfully gapped in prelim test: 22 Number of HSP's that attempted gapping in prelim test: 929 Number of HSP's gapped (non-prelim): 57 length of query: 237 length of database: 10,336,785 effective HSP length: 94 effective length of query: 143 effective length of database: 6,892,531 effective search space: 985631933 effective search space used: 985631933 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 57 (26.7 bits)