BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q04377
         (747 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

5X6O-G nrPDB                                                         1531   0.0  
5OMD-A nrPDB                                                          125   8e-29
5OMB-C nrPDB                                                           44   3e-04
4HZ6-A nrPDB                                                           33   0.66 
6GZH-B nrPDB                                                           30   3.5  
5E76-A nrPDB                                                           30   3.8  
1XLC-A nrPDB                                                           30   4.2  
5XY3-B nrPDB                                                           30   4.2  
5A1Y-E nrPDB                                                           30   5.5  
6FYX-o nrPDB                                                           29   6.8  
4DK0-A nrPDB                                                           29   9.1  

>5X6O-G nrPDB
          Length = 747

 Score = 1531 bits (3963), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 747/747 (100%), Positives = 747/747 (100%)

Query: 1   MRRETVGEFSSDDDDDILLELGTRPPRFTQIPPSSAALQTQIPTTLEVTTTTLNNKQSKN 60
           MRRETVGEFSSDDDDDILLELGTRPPRFTQIPPSSAALQTQIPTTLEVTTTTLNNKQSKN
Sbjct: 1   MRRETVGEFSSDDDDDILLELGTRPPRFTQIPPSSAALQTQIPTTLEVTTTTLNNKQSKN 60

Query: 61  DNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQK 120
           DNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQK
Sbjct: 61  DNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQK 120

Query: 121 LEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQSPQSKKRK 180
           LEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQSPQSKKRK
Sbjct: 121 LEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQSPQSKKRK 180

Query: 181 ISDNLLKKNMVPLNPNRIIPDETSLFLESILLHQIIGADLSTIEILNRLKLDYITEFKFK 240
           ISDNLLKKNMVPLNPNRIIPDETSLFLESILLHQIIGADLSTIEILNRLKLDYITEFKFK
Sbjct: 181 ISDNLLKKNMVPLNPNRIIPDETSLFLESILLHQIIGADLSTIEILNRLKLDYITEFKFK 240

Query: 241 NFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLV 300
           NFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLV
Sbjct: 241 NFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLV 300

Query: 301 ALMYQIVQFRPSATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELI 360
           ALMYQIVQFRPSATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELI
Sbjct: 301 ALMYQIVQFRPSATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELI 360

Query: 361 DYLIISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSFEFVYKLALTISYKPMVNVIFS 420
           DYLIISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSFEFVYKLALTISYKPMVNVIFS
Sbjct: 361 DYLIISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSFEFVYKLALTISYKPMVNVIFS 420

Query: 421 AVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTTL 480
           AVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTTL
Sbjct: 421 AVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTTL 480

Query: 481 HMSKYHDFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGYK 540
           HMSKYHDFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGYK
Sbjct: 481 HMSKYHDFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGYK 540

Query: 541 MEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKFLSREQALMIERYVGQDSPN 600
           MEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKFLSREQALMIERYVGQDSPN
Sbjct: 541 MEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKFLSREQALMIERYVGQDSPN 600

Query: 601 LDLRCHLIEHTLTIIYRLWKDHFKQLREEQIKQVESQLIMSLWRFLVCQTETVTANEREM 660
           LDLRCHLIEHTLTIIYRLWKDHFKQLREEQIKQVESQLIMSLWRFLVCQTETVTANEREM
Sbjct: 601 LDLRCHLIEHTLTIIYRLWKDHFKQLREEQIKQVESQLIMSLWRFLVCQTETVTANEREM 660

Query: 661 RDHRHLVDSLHDLTIKDQASYYEDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEM 720
           RDHRHLVDSLHDLTIKDQASYYEDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEM
Sbjct: 661 RDHRHLVDSLHDLTIKDQASYYEDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEM 720

Query: 721 ARTILESKSFDLTTLEEADSLYISMGL 747
           ARTILESKSFDLTTLEEADSLYISMGL
Sbjct: 721 ARTILESKSFDLTTLEEADSLYISMGL 747


>5OMD-A nrPDB
          Length = 66

 Score =  125 bits (314), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 73  GEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEA 132
           GEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEA
Sbjct: 3   GEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEA 62

Query: 133 RGKS 136
           RGKS
Sbjct: 63  RGKS 66


>5OMB-C nrPDB
          Length = 111

 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 65  VNQLNKAQGEASMLRDKINFLNIE-REKEKNIQAVKVNELQVKHLQELAKLKQELQKLED 123
             QL KA+GE  +LR K++ L    RE + N + ++ + L+  H +E+ KLK EL++LED
Sbjct: 39  AEQLMKAKGEVGVLRQKLSMLEKTLREHDDNQKKLESS-LKSSHEEEVTKLKIELERLED 97

Query: 124 EKKFLQMEAR 133
           E+KF+ +E +
Sbjct: 98  ERKFMLLEQK 107


>4HZ6-A nrPDB
          Length = 444

 Score = 32.7 bits (73), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 621 DHFKQLREEQIKQVESQLIMSLWRFLVCQTE-----TVTANEREMRDHRHLVDSLHDLTI 675
           DH+   R EQ   +  QL +  +RF +         +   N+R +  +R LV+ LH   I
Sbjct: 55  DHYH--RYEQDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDI 112

Query: 676 KDQASYYEDAFEDLPEYIEEE 696
              A+ Y     DLP+++E+E
Sbjct: 113 LPMATLYH---WDLPQWVEDE 130


>6GZH-B nrPDB
          Length = 726

 Score = 30.0 bits (66), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 2/49 (4%)

Query: 76  SMLRDKINFLNIEREKEKNIQAVKVN--ELQVKHLQELAKLKQELQKLE 122
           S+ +D  N    +++  K++ + KV+  E + KH +ELA  K++L+ +E
Sbjct: 363 SLPQDGSNAFISQKQNSKSVPSAKVSLKEYRAKHAEELAAQKRQLENME 411


>5E76-A nrPDB
          Length = 511

 Score = 30.0 bits (66), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 539 YKMEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKF 581
           Y M  W   L D++LN F N    Y  DA I + +  +H  K+
Sbjct: 415 YDMVTWFRYLPDKMLNYFNNQWRGYRTDAIIKDEDGKLHFGKY 457


>1XLC-A nrPDB
          Length = 394

 Score = 30.0 bits (66), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 12/43 (27%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 68  LNKAQGEASMLRDKINFLNIEREK--EKNIQAVKVNELQVKHL 108
           LN  +  A ++ D  +F   + E   E+N   +++N+L ++HL
Sbjct: 348 LNAGESAADLMNDSASFAGFDAEAAAERNFAFIRLNQLAIEHL 390


>5XY3-B nrPDB
          Length = 415

 Score = 30.0 bits (66), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 459 ALLEKEIKSGDVYNENVDTTTLHMSKYHDFFGLIRNIGDNEL 500
           ++LEKEIK  DV+ E     T+ + K   + G+I   G   L
Sbjct: 215 SILEKEIKVADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRL 256


>5A1Y-E nrPDB
          Length = 874

 Score = 29.6 bits (65), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 5/59 (8%)

Query: 683 EDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEMARTILESKSFDLT---TLEEA 738
           E+ +ED  EY+ E+L++ +     ++M+V ++  + E+     + ++F L+   TLEEA
Sbjct: 744 EEGYED--EYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEA 800


>6FYX-o nrPDB
          Length = 964

 Score = 29.3 bits (64), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 18/104 (17%)

Query: 87  IEREKEKNIQAVK---VNELQVKHLQE-LAKLKQELQKLEDEKKFLQMEARGKSKREV-- 140
           I  +K+  ++A K   + E++ +  +E +A+ K+E+   E +K+  ++    + +RE+  
Sbjct: 803 IRNQKKAELEAAKKARIEEVRKRRYEEAIARRKEEIANAERQKRAQELAEATRKQREIEE 862

Query: 141 ------------ITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQ 172
                         N +PPST  +    T++PD + + + A+ Q
Sbjct: 863 AAAKKSTPYSFRAGNREPPSTPSTLPKATVSPDKAKLDMIAQKQ 906


>4DK0-A nrPDB
          Length = 369

 Score = 28.9 bits (63), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 426 NIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTT 479
           N++ +  +   N+ D+ + +SG      IT+LY  L +++K GD+  E +D+TT
Sbjct: 20  NVVATGSIESINTVDVGAQVSGK-----ITKLYVKLGQQVKKGDLLAE-IDSTT 67


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

5X6O-G nrPDB                                                         1484   0.0  
5OMD-A nrPDB                                                          102   7e-22
5OMB-C nrPDB                                                           99   7e-21

Sequences not found previously or not previously below threshold:

5XG2-A nrPDB                                                           34   0.21 
6FYX-o nrPDB                                                           34   0.26 
4HZ6-A nrPDB                                                           33   0.32 
5A1Y-E nrPDB                                                           33   0.57 
4RM9-A nrPDB                                                           33   0.60 
4HSE-A nrPDB                                                           32   1.2  
1QVR-A nrPDB                                                           32   1.2  
1EEP-A nrPDB                                                           32   1.4  
5FWP-E nrPDB                                                           31   1.6  
3K8L-A nrPDB                                                           31   1.9  
1PZD-A nrPDB                                                           31   2.4  
4DK0-A nrPDB                                                           30   3.1  
2F42-A nrPDB                                                           30   3.1  
1EJW-A nrPDB                                                           30   4.2  
5MMI-Z nrPDB                                                           30   4.6  
5E76-A nrPDB                                                           29   5.8  
5TDG-A nrPDB                                                           29   6.2  
4V8P-BB nrPDB                                                          29   7.0  
5ZWM-O nrPDB                                                           29   8.8  
5XY3-B nrPDB                                                           29   9.4  
5MLV-G nrPDB                                                           29   9.9  
5M5O-C nrPDB                                                           29   9.9  


CONVERGED!
>5X6O-G nrPDB
          Length = 747

 Score = 1484 bits (3842), Expect = 0.0,   Method: Composition-based stats.
 Identities = 747/747 (100%), Positives = 747/747 (100%)

Query: 1   MRRETVGEFSSDDDDDILLELGTRPPRFTQIPPSSAALQTQIPTTLEVTTTTLNNKQSKN 60
           MRRETVGEFSSDDDDDILLELGTRPPRFTQIPPSSAALQTQIPTTLEVTTTTLNNKQSKN
Sbjct: 1   MRRETVGEFSSDDDDDILLELGTRPPRFTQIPPSSAALQTQIPTTLEVTTTTLNNKQSKN 60

Query: 61  DNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQK 120
           DNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQK
Sbjct: 61  DNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQK 120

Query: 121 LEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQSPQSKKRK 180
           LEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQSPQSKKRK
Sbjct: 121 LEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQSPQSKKRK 180

Query: 181 ISDNLLKKNMVPLNPNRIIPDETSLFLESILLHQIIGADLSTIEILNRLKLDYITEFKFK 240
           ISDNLLKKNMVPLNPNRIIPDETSLFLESILLHQIIGADLSTIEILNRLKLDYITEFKFK
Sbjct: 181 ISDNLLKKNMVPLNPNRIIPDETSLFLESILLHQIIGADLSTIEILNRLKLDYITEFKFK 240

Query: 241 NFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLV 300
           NFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLV
Sbjct: 241 NFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVHPNESKLAVPFLV 300

Query: 301 ALMYQIVQFRPSATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELI 360
           ALMYQIVQFRPSATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELI
Sbjct: 301 ALMYQIVQFRPSATHNLALKDCFLFICDLIRIYHHVLKVPIHESNMNLHVEPQIFQYELI 360

Query: 361 DYLIISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSFEFVYKLALTISYKPMVNVIFS 420
           DYLIISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSFEFVYKLALTISYKPMVNVIFS
Sbjct: 361 DYLIISYSFDLLEGILRVLQSHPKQTYMEFFDENILKSFEFVYKLALTISYKPMVNVIFS 420

Query: 421 AVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTTL 480
           AVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTTL
Sbjct: 421 AVEVVNIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTTL 480

Query: 481 HMSKYHDFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGYK 540
           HMSKYHDFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGYK
Sbjct: 481 HMSKYHDFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGYK 540

Query: 541 MEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKFLSREQALMIERYVGQDSPN 600
           MEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKFLSREQALMIERYVGQDSPN
Sbjct: 541 MEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKFLSREQALMIERYVGQDSPN 600

Query: 601 LDLRCHLIEHTLTIIYRLWKDHFKQLREEQIKQVESQLIMSLWRFLVCQTETVTANEREM 660
           LDLRCHLIEHTLTIIYRLWKDHFKQLREEQIKQVESQLIMSLWRFLVCQTETVTANEREM
Sbjct: 601 LDLRCHLIEHTLTIIYRLWKDHFKQLREEQIKQVESQLIMSLWRFLVCQTETVTANEREM 660

Query: 661 RDHRHLVDSLHDLTIKDQASYYEDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEM 720
           RDHRHLVDSLHDLTIKDQASYYEDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEM
Sbjct: 661 RDHRHLVDSLHDLTIKDQASYYEDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEM 720

Query: 721 ARTILESKSFDLTTLEEADSLYISMGL 747
           ARTILESKSFDLTTLEEADSLYISMGL
Sbjct: 721 ARTILESKSFDLTTLEEADSLYISMGL 747


>5OMD-A nrPDB
          Length = 66

 Score =  102 bits (253), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 64/64 (100%), Positives = 64/64 (100%)

Query: 73  GEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEA 132
           GEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEA
Sbjct: 3   GEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEA 62

Query: 133 RGKS 136
           RGKS
Sbjct: 63  RGKS 66


>5OMB-C nrPDB
          Length = 111

 Score = 99.0 bits (245), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 65  VNQLNKAQGEASMLRDKINFLNIE-REKEKNIQAVKVNELQVKHLQELAKLKQELQKLED 123
             QL KA+GE  +LR K++ L    RE + N + ++ + L+  H +E+ KLK EL++LED
Sbjct: 39  AEQLMKAKGEVGVLRQKLSMLEKTLREHDDNQKKLESS-LKSSHEEEVTKLKIELERLED 97

Query: 124 EKKFLQMEAR 133
           E+KF+ +E +
Sbjct: 98  ERKFMLLEQK 107


>5XG2-A nrPDB
          Length = 260

 Score = 34.3 bits (77), Expect = 0.21,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 62  NQLVNQLNKAQGEASMLRDKINFLNIEREKEK----NIQAVKVNELQVKHLQELAKLKQE 117
           N+L   + + +GE + LR +I  L  +R+K K    N +A ++ E      +E+A L++E
Sbjct: 176 NELDTLIERERGELAKLRGRIERLERKRDKLKKALENPEARELTEKIRAVEKEIAALREE 235

Query: 118 LQKLE 122
           L ++E
Sbjct: 236 LSRVE 240


>6FYX-o nrPDB
          Length = 964

 Score = 33.9 bits (76), Expect = 0.26,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 14/101 (13%)

Query: 86  NIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEARGKSKREV----- 140
             + E E   +A      + ++ + +A+ K+E+   E +K+  ++    + +RE+     
Sbjct: 806 QKKAELEAAKKARIEEVRKRRYEEAIARRKEEIANAERQKRAQELAEATRKQREIEEAAA 865

Query: 141 ---------ITNVKPPSTTLSTNTNTITPDSSSVAIEAKPQ 172
                      N +PPST  +    T++PD + + + A+ Q
Sbjct: 866 KKSTPYSFRAGNREPPSTPSTLPKATVSPDKAKLDMIAQKQ 906


>4HZ6-A nrPDB
          Length = 444

 Score = 33.5 bits (75), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 10/81 (12%)

Query: 621 DHFKQLREEQIKQVESQLIMSLWRFLVCQTE-----TVTANEREMRDHRHLVDSLHDLTI 675
           DH+   R EQ   +  QL +  +RF +         +   N+R +  +R LV+ LH   I
Sbjct: 55  DHYH--RYEQDLDLMRQLGLKTYRFSIAWARIQPDSSRQINQRGLDFYRRLVEGLHKRDI 112

Query: 676 KDQASYYEDAFEDLPEYIEEE 696
              A+ Y     DLP+++E+E
Sbjct: 113 LPMATLYH---WDLPQWVEDE 130


>5A1Y-E nrPDB
          Length = 874

 Score = 32.7 bits (73), Expect = 0.57,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 5/59 (8%)

Query: 683 EDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEMARTILESKSFDLT---TLEEA 738
           E+ +ED  EY+ E+L++ +     ++M+V ++  + E+     + ++F L+   TLEEA
Sbjct: 744 EEGYED--EYVLEDLEVTVADHIQKVMKVNFEAAWDEVGDEFEKEETFTLSTIKTLEEA 800


>4RM9-A nrPDB
          Length = 587

 Score = 32.7 bits (73), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 9/102 (8%)

Query: 38  LQTQIPTTLEVTTTTLNNKQSKNDNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQA 97
           ++ + P T+EV       ++ K+  QL  Q  +         +K     +EREKE+ ++ 
Sbjct: 293 MRRRKPDTIEVQQMKAQAREEKHQKQLERQQLET--------EKKRRETVEREKEQMMRE 344

Query: 98  VKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEARGKSKRE 139
            +   L+++  +E  K K E +  E  ++ LQ+E   K  +E
Sbjct: 345 KEELMLRLQDYEEKTK-KAERELSEQIQRALQLEEERKRAQE 385


>4HSE-A nrPDB
          Length = 397

 Score = 31.9 bits (71), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%)

Query: 68  LNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDE 124
           L  A  E   L  K   L IERE  K  +     E       E+AKL +E+ KL  E
Sbjct: 259 LESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAE 315


>1QVR-A nrPDB
          Length = 854

 Score = 31.9 bits (71), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/57 (35%), Positives = 24/57 (42%)

Query: 68  LNKAQGEASMLRDKINFLNIEREKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDE 124
           L  A  E   L  K   L IERE  K  +     E       E+AKL +E+ KL  E
Sbjct: 396 LESAPEEIDALERKKLQLEIEREALKKEKDPDSQERLKAIEAEIAKLTEEIAKLRAE 452


>1EEP-A nrPDB
          Length = 404

 Score = 31.6 bits (70), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 26  PRFTQIPPSSAALQTQIPTTLEVTTTTLNNK-QSKNDNQLVNQLNKAQGEASMLRDKINF 84
           PR + + PS  +L+TQ+   + +    L++   +  ++Q+   + K +G   ++   ++ 
Sbjct: 19  PRKSSVLPSEVSLKTQLTKNISLNIPFLSSAMDTVTESQMAIAIAK-EGGIGIIHKNMSI 77

Query: 85  LNIEREKEKN-----IQAVKVNELQVKHLQELAKLKQELQK 120
               +E EK       + +  N    +   E+   KQ L+K
Sbjct: 78  EAQRKEIEKVKTYKFQKTINTNGDTNEQKPEIFTAKQHLEK 118


>5FWP-E nrPDB
          Length = 378

 Score = 31.2 bits (69), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 50/110 (45%), Gaps = 8/110 (7%)

Query: 80  DKINFLNIEREKEKN-----IQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEARG 134
           +++     E+E+         + V   + ++K L+     K EL++L+ E + L+ E R 
Sbjct: 38  ERMEQFQKEKEELDRGCRECKRKVAECQRKLKELEVAEGGKAELERLQAEAQQLRKEER- 96

Query: 135 KSKREVITNVKPPSTTLSTNTNTITPDS-SSVAIEAKPQSPQSKKRKISD 183
            S  + +  ++    ++  N +T++ D  S   +  KP+  +    ++ +
Sbjct: 97  -SWEQKLEEMRKKEKSMPWNVDTLSKDGFSKSMVNTKPEKTEEDSEEVRE 145


>3K8L-A nrPDB
          Length = 669

 Score = 31.2 bits (69), Expect = 1.9,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 17/113 (15%)

Query: 436 DNSSDLKSLISGSWWRDCITRLY----ALLEKEIKSGDVYNENVDT-----TTLHMSKYH 486
           D  +D  SL++  +    +TRL     AL E  +    VYNE+ +         +M+K +
Sbjct: 556 DQQADTHSLLNIYF---SLTRLRNTYPALAEGNMTKHSVYNESQEKDYKPIAAWYMTKDN 612

Query: 487 DFFGLIRNIGDNELGGLISKLIYTDRLQSVPRVISKEDIGMDSDKFTAPIIGY 539
           +   +I N      GG   +L  TD+++ V  V  +     DSD +T  + GY
Sbjct: 613 EKLLVIHN-----FGGTAMQLPLTDKIEKVLFVNGETQQNTDSDSYTLKLGGY 660


>1PZD-A nrPDB
          Length = 322

 Score = 30.8 bits (68), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)

Query: 683 EDAFEDLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEMARTILESKSFDLT---TLEEA 738
           ++ +ED  EY+ E+L++ +     ++M++ ++  + E+     + ++F L+   TLEEA
Sbjct: 192 DEGYED--EYVLEDLEVTIADHIQKVMKLNFEAAWDEVGDEFQKEETFTLSTIKTLEEA 248


>4DK0-A nrPDB
          Length = 369

 Score = 30.4 bits (67), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 6/54 (11%)

Query: 426 NIITSIILNMDNSSDLKSLISGSWWRDCITRLYALLEKEIKSGDVYNENVDTTT 479
           N++ +  +   N+ D+ + +SG      IT+LY  L +++K GD+  E +D+TT
Sbjct: 20  NVVATGSIESINTVDVGAQVSGK-----ITKLYVKLGQQVKKGDLLAE-IDSTT 67


>2F42-A nrPDB
          Length = 179

 Score = 30.4 bits (67), Expect = 3.1,   Method: Composition-based stats.
 Identities = 14/92 (15%), Positives = 38/92 (41%), Gaps = 14/92 (15%)

Query: 42  IPTTLEVTTTTLNNKQSKNDNQLVNQLNKAQGEASMLRDKINFLNIEREKEKNIQAVK-- 99
           IP+ L +        + K  N +  +    + E      K+     ERE +  ++     
Sbjct: 15  IPSALRIA-------KKKRWNSIEEKRISQENELHAYLSKLILAEKERELDDRVKQSDDS 67

Query: 100 -----VNELQVKHLQELAKLKQELQKLEDEKK 126
                +++++ KH + L  + +   ++++++K
Sbjct: 68  QNGGDISKMKSKHDKYLMDMDELFSQVDEKRK 99


>1EJW-A nrPDB
          Length = 100

 Score = 30.0 bits (66), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 7/69 (10%)

Query: 229 LKLDYITEFKFKNFVIAKGAPIGKSIVSLLLRCKKTLTLDRFIDTLLEDIAVLIKEISVH 288
           LKL+Y       +  I +GA  GKS+ SL+   +  LT ++    ++E +  +I +I V 
Sbjct: 28  LKLNYPESVALISAFIMEGARDGKSVASLMEEGRHVLTREQ----VMEGVPEMIPDIQVE 83

Query: 289 ---PNESKL 294
              P+ SKL
Sbjct: 84  ATFPDGSKL 92


>5MMI-Z nrPDB
          Length = 168

 Score = 29.6 bits (65), Expect = 4.6,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 17/120 (14%)

Query: 30  QIPPSSAALQTQIPTTLEVTTTTLNNKQSKNDNQLVNQLNKAQGEASMLRDKINFLNIER 89
           Q PPSS  +  +           L   ++K + QL  ++ + +GE  MLR       ++R
Sbjct: 49  QTPPSSVVVMVK-------KEDELKELRTKTNEQLNEEILQLKGELFMLR-------LQR 94

Query: 90  EKEKNIQAVKVNELQVKHLQELAKLKQELQKLEDEKKFLQMEARGKSKREVITNVKPPST 149
              +N +      ++ K +  +  +K+E +  +   K L  +     KR ++  V+PP +
Sbjct: 95  SARENFKPSDFGRMR-KRVARMLTVKREREIEQGVGKRLSRKLDKAWKRSIV--VRPPPS 151


>5E76-A nrPDB
          Length = 511

 Score = 29.2 bits (64), Expect = 5.8,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 539 YKMEKWLLKLKDEVLNIFENLLMIYGDDATIVNGEMLIHSSKF 581
           Y M  W   L D++LN F N    Y  DA I + +  +H  K+
Sbjct: 415 YDMVTWFRYLPDKMLNYFNNQWRGYRTDAIIKDEDGKLHFGKY 457


>5TDG-A nrPDB
          Length = 519

 Score = 29.2 bits (64), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 688 DLPEYIEEELKMQLNKRTGRIMQVKYDEKFQEMARTILE 726
           DL  YI++EL  QLN    RI  ++   +FQ+    +LE
Sbjct: 169 DLKNYIDKELLPQLNNHDCRISNIETVIEFQQKNNRLLE 207


>4V8P-BB nrPDB
          Length = 391

 Score = 29.2 bits (64), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 23/42 (54%)

Query: 459 ALLEKEIKSGDVYNENVDTTTLHMSKYHDFFGLIRNIGDNEL 500
           +LLEKE+K   ++ EN     L ++K   F G+I+  G   L
Sbjct: 195 SLLEKEVKVDSIFAENEMLDVLGVTKGKGFAGVIKRFGVKHL 236


>5ZWM-O nrPDB
          Length = 587

 Score = 28.9 bits (63), Expect = 8.8,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 9/136 (6%)

Query: 49  TTTTLNNKQSKNDNQLVNQLNKAQG-EASMLRDKINFLNIEREKEKNIQAVKVNELQVKH 107
           T  TL      +D      L   +  E +  R+K+    + +++ +  + + V+ L ++ 
Sbjct: 160 TILTLKESSIFDDTDSTEVLENVKAAEENADREKLRLRQMNKDRRQKKKILNVSSLDIEE 219

Query: 108 LQELAKLKQELQKLEDEKKFLQMEARGKSKREVITNVKPPSTTLSTNTNTITPDSSSVAI 167
            +E  K       L      +    +G  K     + KPP+  +  N ++    S     
Sbjct: 220 EEEGEKHSITTTHL------IIGAEQGVMKAPNTISAKPPTGKVKVNFDSANNMSDEDGG 273

Query: 168 EAKPQSPQSKKRKISD 183
           + KP   + KKRKI D
Sbjct: 274 DFKPL--KIKKRKIKD 287


>5XY3-B nrPDB
          Length = 415

 Score = 28.9 bits (63), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 459 ALLEKEIKSGDVYNENVDTTTLHMSKYHDFFGLIRNIGDNEL 500
           ++LEKEIK  DV+ E     T+ + K   + G+I   G   L
Sbjct: 215 SILEKEIKVADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRL 256


>5MLV-G nrPDB
          Length = 432

 Score = 28.9 bits (63), Expect = 9.9,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 14/142 (9%)

Query: 48  VTTTTLNNKQSKNDNQLVNQLNKAQGEASMLR-DKINFL------NIEREKEKNIQAVKV 100
           + T TL+ K S       N L        +LR  K++ +      NI R   +N +A + 
Sbjct: 288 IFTITLHRKVSSGMTDETNSLTINNNSDDLLRASKLHMVDLAGSENIGRSGAENKRARET 347

Query: 101 NELQVKHLQELAKLKQELQKLED----EKKFLQMEAR---GKSKREVITNVKPPSTTLST 153
             +    L     +   ++K       E K  ++      GK+K  +I  V   +T L  
Sbjct: 348 GMINQSLLTLGRVINALVEKAHHIPYRESKLTRLLQDSLGGKTKTSMIVTVSSTNTNLEE 407

Query: 154 NTNTITPDSSSVAIEAKPQSPQ 175
             +T+   + + +I  KPQ+ Q
Sbjct: 408 TISTLEYAARAKSIRNKPQNNQ 429


>5M5O-C nrPDB
          Length = 369

 Score = 28.9 bits (63), Expect = 9.9,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 14/142 (9%)

Query: 48  VTTTTLNNKQSKNDNQLVNQLNKAQGEASMLR-DKINFL------NIEREKEKNIQAVKV 100
           + T TL+ K S       N L        +LR  K++ +      NI R   +N +A + 
Sbjct: 225 IFTITLHRKVSSGMTDETNSLTINNNSDDLLRASKLHMVDLAGSENIGRSGAENKRARET 284

Query: 101 NELQVKHLQELAKLKQELQKLED----EKKFLQMEAR---GKSKREVITNVKPPSTTLST 153
             +    L     +   ++K       E K  ++      GK+K  +I  V   +T L  
Sbjct: 285 GMINQSLLTLGRVINALVEKAHHIPYRESKLTRLLQDSLGGKTKTSMIVTVSSTNTNLEE 344

Query: 154 NTNTITPDSSSVAIEAKPQSPQ 175
             +T+   + + +I  KPQ+ Q
Sbjct: 345 TISTLEYAARAKSIRNKPQNNQ 366


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.319    0.136    0.377 

Lambda     K      H
   0.267   0.0417    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,166,527
Number of Sequences: 36641
Number of extensions: 1167548
Number of successful extensions: 3774
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 3722
Number of HSP's gapped (non-prelim): 94
length of query: 747
length of database: 10,336,785
effective HSP length: 104
effective length of query: 643
effective length of database: 6,526,121
effective search space: 4196295803
effective search space used: 4196295803
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)