BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q03940 (463 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6GEJ-T nrPDB 930 0.0 5FM7-A nrPDB 676 0.0 6QI8-A nrPDB 652 0.0 6QI9-D nrPDB 365 e-101 6GEJ-U nrPDB 347 4e-96 4WW4-B nrPDB 344 4e-95 2XSZ-A nrPDB 285 3e-77 2XSZ-D nrPDB 188 5e-48 5OUN-A nrPDB 41 0.001 2CQA-A nrPDB 40 0.002 1NJG-A nrPDB 37 0.016 5UBV-A nrPDB 37 0.021 2ZAO-A nrPDB 37 0.025 1XWI-A nrPDB 36 0.028 3GLF-B nrPDB 36 0.038 4Z8X-A nrPDB 36 0.040 1HQC-A nrPDB 36 0.040 2X8A-A nrPDB 36 0.042 1LV7-A nrPDB 35 0.057 2R65-A nrPDB 35 0.081 6AZ0-A nrPDB 34 0.12 2CE7-A nrPDB 34 0.14 6CHS-H nrPDB 33 0.23 6FVU-L nrPDB 33 0.28 6BLB-A nrPDB 33 0.28 3HU1-A nrPDB 33 0.31 5WVI-L nrPDB 33 0.32 5C18-A nrPDB 33 0.37 6MCK-A nrPDB 33 0.37 6B5C-A nrPDB 33 0.38 3H0K-A nrPDB 32 0.40 6EF0-L nrPDB 32 0.47 3H4M-A nrPDB 32 0.58 2QZ4-A nrPDB 32 0.66 6EPC-H nrPDB 32 0.84 3M6A-A nrPDB 31 0.87 6EF1-I nrPDB 31 0.90 3WHK-A nrPDB 31 0.97 2DHR-A nrPDB 31 1.0 1IY1-A nrPDB 31 1.0 6FVU-I nrPDB 31 1.1 5VQ9-D nrPDB 31 1.2 3JCP-I nrPDB 31 1.3 6HE9-H nrPDB 31 1.4 6AP1-A nrPDB 31 1.4 3EIH-A nrPDB 30 1.7 5VC7-A nrPDB 30 1.7 6HE4-H nrPDB 30 1.7 5G4G-A nrPDB 30 1.7 5XMK-A nrPDB 30 1.7 5VHF-B nrPDB 30 1.7 4XGU-A nrPDB 30 1.8 5VFP-B nrPDB 30 1.9 5VHO-B nrPDB 30 1.9 3W34-A nrPDB 30 2.0 4LCB-A nrPDB 30 2.2 1IN6-A nrPDB 30 2.3 5EQT-A nrPDB 30 2.3 6MSK-B nrPDB 30 2.4 6MAT-A nrPDB 30 2.5 5UOT-0 nrPDB 30 2.6 5WC0-A nrPDB 30 2.7 5T0C-AD nrPDB 30 2.8 6MDP-A nrPDB 30 2.9 6B5D-A nrPDB 30 2.9 4D81-A nrPDB 30 3.1 3Q8X-B nrPDB 30 3.2 5EYN-A nrPDB 30 3.2 2R6A-A nrPDB 29 3.4 5WVI-K nrPDB 29 4.4 1D2N-A nrPDB 29 4.4 1IYR-A nrPDB 29 4.4 5VHN-D nrPDB 29 4.6 6EF1-K nrPDB 29 4.8 3PFI-A nrPDB 29 4.8 1FNN-A nrPDB 29 4.8 3ZYS-B nrPDB 29 5.1 5ZQM-A nrPDB 29 5.3 5GTM-A nrPDB 29 5.4 1SXJ-A nrPDB 28 5.8 2CHG-A nrPDB 28 5.8 1BK4-A nrPDB 28 6.0 2CHV-A nrPDB 28 6.4 1IQP-A nrPDB 28 7.2 5Z6Q-A nrPDB 28 7.6 6EF3-H nrPDB 28 7.9 6EF0-H nrPDB 28 9.9 >6GEJ-T nrPDB Length = 463 Score = 930 bits (2403), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/463 (100%), Positives = 463/463 (100%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV Sbjct: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET Sbjct: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 Query: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR Sbjct: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 Query: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK 240 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK Sbjct: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK 240 Query: 241 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV 300 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV Sbjct: 241 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV 300 Query: 301 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP 360 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP Sbjct: 301 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP 360 Query: 361 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA 420 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA Sbjct: 361 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA 420 Query: 421 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL 463 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL Sbjct: 421 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL 463 >5FM7-A nrPDB Length = 464 Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust. Identities = 326/460 (70%), Positives = 384/460 (83%), Gaps = 8/460 (1%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 MV ISEV+ N + RTAAHTHIKGLGL+ SG+A++ GFVGQ AREACGV Sbjct: 3 MVQISEVRGNTRDH--------RTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGV 54 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 +VDLIKA KM+GR +LLAGGP TGKTALALAISQELG K+PFCP+ GSE+YS EVKKTE Sbjct: 55 VVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEV 114 Query: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 LMENFRRAIGLR++ETK+VYEGEVTE+TPE+AENPLGGYGKTIS +++GLKSA+G K LR Sbjct: 115 LMENFRRAIGLRVRETKDVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLKSARGQKKLR 174 Query: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK 240 LDP+IYE+IQ+E+V +GDVIYIE NTGA KRVGRSDAYATEFDLE EEYVP+PKGEVHKK Sbjct: 175 LDPSIYEAIQKERVQVGDVIYIETNTGACKRVGRSDAYATEFDLEAEEYVPIPKGEVHKK 234 Query: 241 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV 300 KEIVQDVTLHDLDVANARPQGGQD+ISMMGQL+KPK TEIT+KLR E+NKVV KYI+QGV Sbjct: 235 KEIVQDVTLHDLDVANARPQGGQDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGV 294 Query: 301 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP 360 AELIPGVLFIDE +MLDIE FTYLNKALES IAP+VVLASNRG+ T+RG +D+ + HG+P Sbjct: 295 AELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIP 354 Query: 361 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA 420 PD + RLLI+ T PY+ DEIR I+ RA E +Q+ +A+D +A G SLRY LQLLA Sbjct: 355 PDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLA 414 Query: 421 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSA 460 P ILA+ + R ++ V D+ EA+ LFLDA+RS IL ++ Sbjct: 415 PASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTG 454 >6QI8-A nrPDB Length = 456 Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/434 (70%), Positives = 370/434 (85%) Query: 23 RTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPS 82 R A+H+H+KGLGLDESG+AK+ G VGQ AREACGVIV+LIK+KKM+GRA+LLAG P Sbjct: 14 RIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPG 73 Query: 83 TGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEG 142 TGKTALALAI+QELG KVPFCP+VGSE+YS E+KKTE LMENFRRAIGLRIKETKEVYEG Sbjct: 74 TGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYEG 133 Query: 143 EVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYI 202 EVTELTP + ENP+GGYGKTISHVI+GLK+AKGTK L+LDP+I+ES+Q+E+V GDVIYI Sbjct: 134 EVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIYI 193 Query: 203 EANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGG 262 EAN+GAVKR GR D YATEFDLE EEYVPLPKG+VHKKKEI+QDVTLHDLDVANARPQGG Sbjct: 194 EANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQGG 253 Query: 263 QDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIFT 322 QD++SMMGQL+KPKKTEIT+KLR E+NKVV KYIDQG+AEL+PGVLF+DEV+MLDIE FT Sbjct: 254 QDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECFT 313 Query: 323 YLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKDEIRT 382 YL++ALES+IAP+V+ ASNRG +RGTED+ SPHG+P DL+DR++I+RT+ Y E++ Sbjct: 314 YLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMKQ 373 Query: 383 IIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEA 442 II+ RA E + + AL+ L +GT+T+LRY++QLL P +LA+ + + I V E Sbjct: 374 IIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEEI 433 Query: 443 KLLFLDAKRSTKIL 456 LF DAK S KIL Sbjct: 434 SELFYDAKSSAKIL 447 >6QI9-D nrPDB Length = 463 Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust. Identities = 187/439 (42%), Positives = 286/439 (65%), Gaps = 15/439 (3%) Query: 21 VTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGG 80 + R AH+HI+GLGLD++ ++ G VGQ+ AR A GV++++I+ K++GRA+L+AG Sbjct: 19 IERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQ 78 Query: 81 PSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVY 140 P TGKTA+A+ ++Q LGP PF + GSE++S+E+ KTE L + FRR+IG+RIKE E+ Sbjct: 79 PGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKEETEII 138 Query: 141 EGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVI 200 EGEV E+ + P G G + + LK+ + L + ES+ ++KV GDVI Sbjct: 139 EGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLGTKMIESLTKDKVQAGDVI 193 Query: 201 YIEANTGAVKRVGRSDAYATEFDL--ETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANAR 258 I+ TG + ++GRS A ++D ++V P GE+ K+KE+V V+LH++DV N+R Sbjct: 194 TIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVHTVSLHEIDVINSR 253 Query: 259 PQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDI 318 QG L EI ++R+++N VA++ ++G AE+IPGVLFIDEV+MLDI Sbjct: 254 TQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDEVHMLDI 306 Query: 319 EIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKD 378 E F++LN+ALES++APV+++A+NRG+T +RGT SPHG+P DL+DRLLIV T PY + Sbjct: 307 ESFSFLNRALESDMAPVLIMATNRGITRIRGT-SYQSPHGIPIDLLDRLLIVSTTPYSEK 365 Query: 379 EIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVND 438 + + I+ R E +++ A +L +G ETSLRYA+QL+ ++ + E+ V+D Sbjct: 366 DTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTEVQVDD 425 Query: 439 VNEAKLLFLDAKRSTKILE 457 + LFLD RST+ ++ Sbjct: 426 IKRVYSLFLDESRSTQYMK 444 >6GEJ-U nrPDB Length = 471 Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 189/454 (41%), Positives = 291/454 (64%), Gaps = 21/454 (4%) Query: 15 SSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRA 74 +S+ +++ AAH+HI GLGLDE+ + G VGQ++AR A GVI+ +++ ++GRA Sbjct: 11 TSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRA 70 Query: 75 ILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIK 134 +L+AG PSTGKTALA+ +SQ LG VPF + GSE++S+E+ KTE L + FR++IG++IK Sbjct: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIK 130 Query: 135 ETKEVYEGEVTELTPEDAENPLGGY--GKTISHVIVGLKSAKGTKTLRLDPTIYESIQRE 192 E E+ EGEV E+ + + GG+ GK + +K+ L + + + +E Sbjct: 131 EETELIEGEVVEIQID--RSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKE 182 Query: 193 KVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEE--YVPLPKGEVHKKKEIVQDVTLH 250 KV GDVI I+ +G + ++GRS A + ++D + +V P+GE+ K+K +V V+LH Sbjct: 183 KVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLH 242 Query: 251 DLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFI 310 ++DV N+R QG L EI ++R ++N VA++ ++G AE++PGVLFI Sbjct: 243 EIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFI 295 Query: 311 DEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIV 370 DEV+MLDIE F+++N+ALE AP+V++A+NRG++ RGT + SPHG+P DL+DR +I+ Sbjct: 296 DEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIII 354 Query: 371 RTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSN 430 T Y++ EI+TI+ RA E +++ S ALDLL G ETSLRY+ L++ +A Sbjct: 355 TTKSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRK 414 Query: 431 RKEIVVNDVNEAKLLFLDAKRSTK-ILETSANYL 463 + V DV A LLFLD+ RS K + E + Y+ Sbjct: 415 NNTVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 >4WW4-B nrPDB Length = 513 Score = 344 bits (883), Expect = 4e-95, Method: Compositional matrix adjust. Identities = 186/467 (39%), Positives = 295/467 (63%), Gaps = 27/467 (5%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEG-GFVGQIEAREACG 59 + +++E KE G+N AAH+HI+GLG+D + R G VGQ +AR+A Sbjct: 31 VTSVTETKELRGLN--------LIAAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAA 82 Query: 60 VIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE 119 V++++IK K++GRA+L+AG PSTGKTA+A+ ++Q LG VPF L SE++S+E+ KTE Sbjct: 83 VVLEMIKQGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTE 142 Query: 120 TLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTL 179 L + FR++IG+RIKE E+ EGEV E+ + + GK + +K+ Sbjct: 143 ALTQAFRKSIGVRIKEESEIMEGEVVEIQIDRSVTGGAKQGK------LTIKTTDMEAIY 196 Query: 180 RLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFD---LETEEYVPLPKGE 236 + + +++ +E+V GD+I I+ ++G + ++GRS A + ++D ++T +++ P+GE Sbjct: 197 DMGSKMIDAMTKERVMAGDIISIDKSSGKITKLGRSYARSRDYDAMGVDT-KFLQCPEGE 255 Query: 237 VHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYI 296 + K+KE+V V+LH++DV N+R QG L EI ++R ++N VA++ Sbjct: 256 LQKRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIRSEIRDQINTKVAEWK 308 Query: 297 DQGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISP 356 ++G AE++PGVLFIDEV+MLDIE F+Y+N+ALES++AP+V++ASNRG++ +RGT D SP Sbjct: 309 EEGKAEIVPGVLFIDEVHMLDIECFSYINRALESDLAPIVIMASNRGVSRIRGT-DYKSP 367 Query: 357 HGVPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYAL 416 HG+P D +DR++I+ T PY DE+R I+ RA E + + AL LL +G E LRYA Sbjct: 368 HGLPLDFLDRVVIINTHPYTPDELRQILSIRAQEEEVDLTPDALALLTKIGQEAGLRYAS 427 Query: 417 QLLAPCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL 463 L+ ++A K++ V DV + LF D RS + ++ S L Sbjct: 428 NLITTSQLIAAKRRAKQVGVEDVQRSFKLFYDPARSVRFVQESEKRL 474 >2XSZ-A nrPDB Length = 367 Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust. Identities = 133/214 (62%), Positives = 171/214 (79%) Query: 243 IVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAE 302 I+QDVTLHDLDVANARPQGGQD++SMMGQL+KPKKTEIT+KLR E+NKVV KYIDQG+AE Sbjct: 145 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 204 Query: 303 LIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPD 362 L+PGVLF+DEV+MLDIE FTYL++ALES+IAP+V+ ASNRG +RGTED+ SPHG+P D Sbjct: 205 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 264 Query: 363 LIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPC 422 L+DR++I+RT+ Y E++ II+ RA E + + AL+ L +GT+T+LRY++QLL P Sbjct: 265 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 324 Query: 423 GILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKIL 456 +LA+ + + I V E LF DAK S KIL Sbjct: 325 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKIL 358 Score = 187 bits (476), Expect = 6e-48, Method: Compositional matrix adjust. Identities = 88/113 (77%), Positives = 101/113 (89%) Query: 23 RTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPS 82 R A+H+H+KGLGLDESG+AK+ G VGQ AREACGVIV+LIK+KKM+GRA+LLAG P Sbjct: 28 RIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPPG 87 Query: 83 TGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKE 135 TGKTALALAI+QELG KVPFCP+VGSE+YS E+KKTE LMENFRRAIGLRIKE Sbjct: 88 TGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKE 140 >2XSZ-D nrPDB Length = 378 Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 94/215 (43%), Positives = 143/215 (66%), Gaps = 8/215 (3%) Query: 243 IVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAE 302 +V V+LH++DV N+R QG L EI ++R+++N VA++ ++G AE Sbjct: 153 VVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAE 205 Query: 303 LIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPD 362 +IPGVLFIDEV+MLDIE F++LN+ALES++APV+++A+NRG+T +RGT SPHG+P D Sbjct: 206 IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTS-YQSPHGIPID 264 Query: 363 LIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPC 422 L+DRLLIV T PY + + + I+ R E +++ A +L +G ETSLRYA+QL+ Sbjct: 265 LLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAA 324 Query: 423 GILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILE 457 ++ + E+ V+D+ LFLD RST+ ++ Sbjct: 325 SLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMK 359 Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 58/115 (50%), Positives = 87/115 (75%) Query: 21 VTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGG 80 + R AH+HI+GLGLD++ ++ G VGQ+ AR A GV++++I+ K++GRA+L+AG Sbjct: 34 IERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVLEMIREGKIAGRAVLIAGQ 93 Query: 81 PSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKE 135 P TGKTA+A+ ++Q LGP PF + GSE++S+E+ KTE L + FRR+IG+RIKE Sbjct: 94 PGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALTQAFRRSIGVRIKE 148 >5OUN-A nrPDB Length = 107 Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 9/67 (13%) Query: 184 TIYE-------SIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEE--YVPLPK 234 TIYE + +EKV GDVI I+ +G + ++GRS A + ++D + +V P+ Sbjct: 40 TIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPE 99 Query: 235 GEVHKKK 241 GE+ K+K Sbjct: 100 GELQKRK 106 >2CQA-A nrPDB Length = 95 Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust. Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 5/82 (6%) Query: 134 KETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREK 193 KE E+ EGEV E+ + P G G + + LK+ + L + ES+ ++K Sbjct: 8 KEETEIIEGEVVEI---QIDRPATGTGSKVGKLT--LKTTEMETIYDLGTKMIESLTKDK 62 Query: 194 VSIGDVIYIEANTGAVKRVGRS 215 V GDVI I+ TG + ++GRS Sbjct: 63 VQAGDVITIDKATGKISKLGRS 84 >1NJG-A nrPDB Length = 250 Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust. Identities = 38/112 (33%), Positives = 47/112 (41%), Gaps = 13/112 (11%) Query: 307 VLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDR 366 V IDEV+ML F L K LE V L + T D P +P ++ R Sbjct: 129 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLA---------TTD---PQKLPVTILSR 176 Query: 367 LLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQL 418 L D ++IR +E E + E AL LLA E SLR AL L Sbjct: 177 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 227 >5UBV-A nrPDB Length = 246 Score = 37.0 bits (84), Expect = 0.021, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 2/43 (4%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEV 115 + +LL G P TGKT LA A++ E G VPF + GSE + V Sbjct: 40 KGVLLVGPPGTGKTLLARAVAGEAG--VPFFYMSGSEFDEIYV 80 >2ZAO-A nrPDB Length = 444 Score = 36.6 bits (83), Expect = 0.025, Method: Compositional matrix adjust. Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 L K+ R ILL G P TGK+ LA A++ E F + S+L S + ++E L++ Sbjct: 159 LFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEKLVK 217 Query: 124 NF 125 N Sbjct: 218 NL 219 >1XWI-A nrPDB Length = 322 Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust. Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 5/92 (5%) Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 L K+ R ILL G P TGK+ LA A++ E F + S+L S + ++E L++ Sbjct: 37 LFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEKLVK 95 Query: 124 N-FRRAIGLRIKETKEVYEGEVTELTPEDAEN 154 N F+ A R + ++ E+ L +EN Sbjct: 96 NLFQLA---RENKPSIIFIDEIDSLCGSRSEN 124 >3GLF-B nrPDB Length = 395 Score = 35.8 bits (81), Expect = 0.038, Method: Compositional matrix adjust. Identities = 36/112 (32%), Positives = 45/112 (40%), Gaps = 13/112 (11%) Query: 307 VLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDR 366 V IDEV+ML F L K LE V L + P +P ++ R Sbjct: 144 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLAT------------TDPQKLPVTILSR 191 Query: 367 LLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQL 418 L D ++IR +E E + E AL LLA E SLR AL L Sbjct: 192 CLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 242 >4Z8X-A nrPDB Length = 497 Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 5/56 (8%) Query: 63 DLIKAKKMSGR---AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEV 115 D +K +K+ GR +LL G P GKT LA AI+ E VPF + GS+ + V Sbjct: 39 DPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGE--AHVPFISVSGSDFVEMFV 92 >1HQC-A nrPDB Length = 324 Score = 35.8 bits (81), Expect = 0.040, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 28/50 (56%) Query: 48 FVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELG 97 ++GQ ++ V ++ KA+K +LL G P GKT LA I+ ELG Sbjct: 14 YIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAHELG 63 >2X8A-A nrPDB Length = 274 Score = 35.8 bits (81), Expect = 0.042, Method: Compositional matrix adjust. Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 6/94 (6%) Query: 75 ILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGLRI 133 +LLAG P GKT LA A++ E G + F + G EL ++ V ++E + + F+RA + Sbjct: 47 VLLAGPPGCGKTLLAKAVANESG--LNFISVKGPELLNMYVGESERAVRQVFQRA---KN 101 Query: 134 KETKEVYEGEVTELTPEDAENPLGGYGKTISHVI 167 ++ EV L P ++ G + ++ ++ Sbjct: 102 SAPCVIFFDEVDALCPRRSDRETGASVRVVNQLL 135 >1LV7-A nrPDB Length = 257 Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 9/73 (12%) Query: 50 GQIEAREACGVIVDLIKA----KKMSGR---AILLAGGPSTGKTALALAISQELGPKVPF 102 G EA+E +V+ ++ +K+ G+ +L+ G P TGKT LA AI+ E KVPF Sbjct: 16 GCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAGE--AKVPF 73 Query: 103 CPLVGSELYSVEV 115 + GS+ + V Sbjct: 74 FTISGSDFVEMFV 86 >2R65-A nrPDB Length = 268 Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust. Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 9/73 (12%) Query: 50 GQIEAREACGVIVDLIKAKKMSG-------RAILLAGGPSTGKTALALAISQELGPKVPF 102 G EA+E IVD +K + + +LL G P TGKT LA A++ E VPF Sbjct: 15 GNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGE--AHVPF 72 Query: 103 CPLVGSELYSVEV 115 + GS + V Sbjct: 73 FSMGGSSFIEMFV 85 >6AZ0-A nrPDB Length = 439 Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust. Identities = 29/74 (39%), Positives = 36/74 (48%), Gaps = 9/74 (12%) Query: 49 VGQIEAREACGVIVDLIK----AKKMSGR---AILLAGGPSTGKTALALAISQELGPKVP 101 G EAR IVD +K + + G+ +LL G P TGKT LA A + E G V Sbjct: 6 CGCDEARAELEEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEAG--VD 63 Query: 102 FCPLVGSELYSVEV 115 F + GSE V V Sbjct: 64 FFFMSGSEFDEVYV 77 >2CE7-A nrPDB Length = 476 Score = 33.9 bits (76), Expect = 0.14, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 5/66 (7%) Query: 53 EAREACGVIVDLIKAKKMSGR---AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 E +E + D K ++ R ILL G P TGKT LA A++ E VPF + GS+ Sbjct: 27 ELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE--ANVPFFHISGSD 84 Query: 110 LYSVEV 115 + V Sbjct: 85 FVELFV 90 >6CHS-H nrPDB Length = 819 Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 2/48 (4%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 R +L G P TGKT LA A++ E F + G EL S+ ++E+ Sbjct: 529 RGVLFYGPPGTGKTMLAKAVANECAAN--FISVKGPELLSMWFGESES 574 Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust. Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAI 129 R +LL G P TGKT +A A++ E G F + G E+ S ++E+ N R+A Sbjct: 255 RGVLLYGPPGTGKTLMARAVANETG--AFFFLINGPEIMSKMAGESES---NLRKAF 306 >6FVU-L nrPDB Length = 388 Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 + +LL G P TGKT LA A++ +G F P G Sbjct: 168 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 202 >6BLB-A nrPDB Length = 355 Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 27/50 (54%) Query: 48 FVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELG 97 ++GQ RE + + + ++ + L+ G P GKT LA I+QE+G Sbjct: 35 YIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQEMG 84 >3HU1-A nrPDB Length = 489 Score = 32.7 bits (73), Expect = 0.31, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAI 129 R ILL G P TGKT +A A++ E G F + G E+ S ++E+ N R+A Sbjct: 239 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES---NLRKAF 290 >5WVI-L nrPDB Length = 437 Score = 32.7 bits (73), Expect = 0.32, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 + +LL G P TGKT LA A++ +G F P G Sbjct: 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 250 >5C18-A nrPDB Length = 785 Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAI 129 R ILL G P TGKT +A A++ E G F + G E+ S ++E+ N R+A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES---NLRKAF 289 >6MCK-A nrPDB Length = 606 Score = 32.7 bits (73), Expect = 0.37, Method: Compositional matrix adjust. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 5/57 (8%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAI 129 R ILL G P TGKT +A A++ E G F + G E+ S ++E+ N R+A Sbjct: 31 RGILLYGPPGTGKTLIARAVANETG--AFFFLINGPEIMSKLAGESES---NLRKAF 82 >6B5C-A nrPDB Length = 307 Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 20/35 (57%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQELG 97 D K + + +L+ G P TGKT LA A++ E G Sbjct: 49 DFFKGIRRPWKGVLMVGPPGTGKTMLAKAVATECG 83 >3H0K-A nrPDB Length = 178 Score = 32.3 bits (72), Expect = 0.40, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 10/80 (12%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + IL+ G P +GK+ A + +E G KV V + YS+E K E LM+ +R Sbjct: 1 KVILITGMPGSGKSEFA-KLLKERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR----- 54 Query: 133 IKETKEVY-EGEVTELTPED 151 +E+Y +G V L E+ Sbjct: 55 ---LREIYGDGVVARLCVEE 71 >6EF0-L nrPDB Length = 273 Score = 32.3 bits (72), Expect = 0.47, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 + +LL G P TGKT LA A++ +G F P G Sbjct: 53 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 87 >3H4M-A nrPDB Length = 285 Score = 32.0 bits (71), Expect = 0.58, Method: Compositional matrix adjust. Identities = 19/38 (50%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ILL G P TGKT LA A++ E F +VGSEL Sbjct: 52 KGILLYGPPGTGKTLLAKAVATETN--ATFIRVVGSEL 87 >2QZ4-A nrPDB Length = 262 Score = 32.0 bits (71), Expect = 0.66, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 2/41 (4%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSV 113 + LL G P GKT LA A++ E +VPF + G+E V Sbjct: 40 KGALLLGPPGCGKTLLAKAVATE--AQVPFLAMAGAEFVEV 78 >6EPC-H nrPDB Length = 433 Score = 31.6 bits (70), Expect = 0.84, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + +LL G P TGKT A A++ F P++GSEL Sbjct: 210 KGVLLFGPPGTGKTLCARAVANRT--DACFIPVIGSEL 245 >3M6A-A nrPDB Length = 543 Score = 31.2 bits (69), Expect = 0.87, Method: Compositional matrix adjust. Identities = 17/40 (42%), Positives = 23/40 (57%) Query: 68 KKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 K + G + LAG P GKT+LA +I++ LG K L G Sbjct: 104 KSLKGPILCLAGPPGVGKTSLAKSIAKSLGRKFVRISLGG 143 >6EF1-I nrPDB Length = 271 Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 51 KGVILYGAPGTGKTLLAKAVANQTS--ATFLRIVGSEL 86 >3WHK-A nrPDB Length = 270 Score = 31.2 bits (69), Expect = 0.97, Method: Compositional matrix adjust. Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + +LL G P GKT +A AI+ E+ F +VGSEL Sbjct: 52 KGVLLYGPPGCGKTLMAKAIAHEV--NATFIRVVGSEL 87 >2DHR-A nrPDB Length = 499 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEV 115 + +LL G P GKT LA A++ E +VPF GS+ + V Sbjct: 65 KGVLLVGPPGVGKTHLARAVAGEA--RVPFITASGSDFVEMFV 105 >1IY1-A nrPDB Length = 254 Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust. Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 6/59 (10%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE----LYSVEVKKTETLMENFRR 127 + +LL G P GKT LA A++ E +VPF GS+ V + L E +R Sbjct: 50 KGVLLVGPPGVGKTHLARAVAGEA--RVPFITASGSDFVEMFVGVGAARVRDLFETAKR 106 >6FVU-I nrPDB Length = 384 Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 164 KGVILYGAPGTGKTLLAKAVANQTS--ATFLRIVGSEL 199 >5VQ9-D nrPDB Length = 432 Score = 30.8 bits (68), Expect = 1.2, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 18/25 (72%) Query: 72 GRAILLAGGPSTGKTALALAISQEL 96 R +LL G P TGKT+L A++Q+L Sbjct: 172 NRVVLLHGPPGTGKTSLCKALAQKL 196 >3JCP-I nrPDB Length = 437 Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 217 KGVILYGAPGTGKTLLAKAVANQTS--ATFLRIVGSEL 252 >6HE9-H nrPDB Length = 390 Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + +LL G P TGKT LA A++ + + F +VGSE Sbjct: 168 KGVLLYGPPGTGKTLLAKAVANQT--RATFIRVVGSEF 203 >6AP1-A nrPDB Length = 519 Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 L K + ILL G P TGK+ LA A++ E F + S+L S + ++E L++ Sbjct: 59 LFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST--FFSVSSSDLVSKWMGESEKLVK 116 Query: 124 NF 125 Sbjct: 117 QL 118 >3EIH-A nrPDB Length = 340 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 L K + ILL G P TGK+ LA A++ E F + S+L S + ++E L++ Sbjct: 61 LFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST--FFSVSSSDLVSKWMGESEKLVK 118 Query: 124 NF 125 Sbjct: 119 QL 120 >5VC7-A nrPDB Length = 564 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRA 128 + ++L G P TGKT +A A++ E G F + G E+ S ++E L E F +A Sbjct: 44 KGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKA 98 Score = 28.5 bits (62), Expect = 5.9, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRA 128 + LL G P GKT LA A++ E F + G E+ S V ++E + E F++A Sbjct: 321 KGFLLYGPPGVGKTLLAKAVATESNAN--FISIKGPEVLSKWVGESEKAIREIFKKA 375 >6HE4-H nrPDB Length = 267 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + +LL G P TGKT LA A++ + + F +VGSE Sbjct: 54 KGVLLYGPPGTGKTLLAKAVANQT--RATFIRVVGSEF 89 >5G4G-A nrPDB Length = 721 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRA 128 + ++L G P TGKT +A A++ E G F + G E+ S ++E L E F +A Sbjct: 220 KGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKA 274 Score = 28.9 bits (63), Expect = 5.6, Method: Compositional matrix adjust. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRA 128 + LL G P GKT LA A++ E F + G E+ S V ++E + E F++A Sbjct: 497 KGFLLYGPPGVGKTLLAKAVATESNAN--FISIKGPEVLSKWVGESEKAIREIFKKA 551 >5XMK-A nrPDB Length = 437 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 2/62 (3%) Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 L K + ILL G P TGK+ LA A++ E F + S+L S + ++E L++ Sbjct: 158 LFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANST--FFSVSSSDLVSKWMGESEKLVK 215 Query: 124 NF 125 Sbjct: 216 QL 217 >5VHF-B nrPDB Length = 340 Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 128 KGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSEL 163 >4XGU-A nrPDB Length = 424 Score = 30.4 bits (67), Expect = 1.8, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 18/29 (62%) Query: 72 GRAILLAGGPSTGKTALALAISQELGPKV 100 R ILL G P TGKT+L ++Q L ++ Sbjct: 172 NRLILLTGPPGTGKTSLCKGLAQHLSIRM 200 >5VFP-B nrPDB Length = 389 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 169 KGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSEL 204 >5VHO-B nrPDB Length = 267 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 54 KGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSEL 89 >3W34-A nrPDB Length = 211 Score = 30.0 bits (66), Expect = 2.0, Method: Compositional matrix adjust. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 77 LAGGPSTGKTALALAISQELGPKVPFCPL 105 +AGG ++GKT LA A+++ LG +V P+ Sbjct: 11 IAGGTASGKTTLAQALARTLGERVALLPM 39 >4LCB-A nrPDB Length = 367 Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 16/24 (66%) Query: 73 RAILLAGGPSTGKTALALAISQEL 96 R ILL G P GKT LA A++ E+ Sbjct: 131 RGILLYGPPGNGKTMLAAAVANEI 154 >1IN6-A nrPDB Length = 334 Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%) Query: 48 FVGQIEAREACGVIVDLIKAKKMSGRA---ILLAGGPSTGKTALALAISQEL 96 F+GQ ++ + ++ A KM G +LLAG P G+T LA I+ EL Sbjct: 27 FIGQENVKKKLSLALE---AAKMRGEVLDHVLLAGPPGLGRTTLAHIIASEL 75 >5EQT-A nrPDB Length = 257 Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + +LL G P GKT +A A++ E+ F +VGSEL Sbjct: 40 KGVLLYGPPGCGKTLMAKALAHEV--NATFIRVVGSEL 75 >6MSK-B nrPDB Length = 440 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQTS--ATFLRVVGSEL 255 >6MAT-A nrPDB Length = 813 Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust. Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 9/90 (10%) Query: 40 VAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPK 99 V K++E +G I+ E + + K +G ILL G P GKT +A A++ E K Sbjct: 509 VRKKLEMSIIGPIKNPE----LFTRVGIKPAAG--ILLWGPPGCGKTLVAKAVANE--SK 560 Query: 100 VPFCPLVGSELYSVEVKKTETLMEN-FRRA 128 F + G EL + V ++E + F RA Sbjct: 561 ANFISIKGPELLNKYVGESERAVRQLFSRA 590 >5UOT-0 nrPDB Length = 619 Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust. Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 17/122 (13%) Query: 58 CGVIVDLIKA----KKMSGRAILLAGGPSTGKTALALAISQELGPK----VPFCPLVGSE 109 C ++D ++A + ++ AI + G S+GK+++ A+S P+ V CPLV Sbjct: 8 CIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPRGSGIVTRCPLV--- 64 Query: 110 LYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVG 169 +++KK E + I R E + G+V E A+N + G G+ ISH ++ Sbjct: 65 ---LKLKKQPC--EAWAGRISYRNTELELQDPGQV-EKEIHKAQNVMAGNGRGISHELIS 118 Query: 170 LK 171 L+ Sbjct: 119 LE 120 >5WC0-A nrPDB Length = 472 Score = 29.6 bits (65), Expect = 2.7, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 23/36 (63%) Query: 60 VIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQE 95 ++ + + + +A++LAG P TGKT +A AI+ E Sbjct: 214 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 249 >5T0C-AD nrPDB Length = 418 Score = 29.6 bits (65), Expect = 2.8, Method: Compositional matrix adjust. Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 7/70 (10%) Query: 46 GGF-VGQIEAREACGVIVDLIKAKKMSG----RAILLAGGPSTGKTALALAISQELGPKV 100 GG + + E REA + + + K G R +L+ G P GKT LA A++ Sbjct: 168 GGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT--TA 225 Query: 101 PFCPLVGSEL 110 F +VGSE Sbjct: 226 AFIRVVGSEF 235 >6MDP-A nrPDB Length = 768 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 64 LIKAKKMSGR----AILLAGGPSTGKTALALAISQELG-PKVPFC 103 L++ K S R ++LL G P +GKTALA I++E P + C Sbjct: 548 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKIC 592 >6B5D-A nrPDB Length = 309 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 13/36 (36%), Positives = 23/36 (63%) Query: 60 VIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQE 95 ++ + + + +A++LAG P TGKT +A AI+ E Sbjct: 51 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 86 >4D81-A nrPDB Length = 283 Score = 29.6 bits (65), Expect = 3.1, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 16/24 (66%) Query: 73 RAILLAGGPSTGKTALALAISQEL 96 R ILL G P GKT +A A++ EL Sbjct: 46 RGILLYGPPGCGKTMIAAAVANEL 69 >3Q8X-B nrPDB Length = 287 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%) Query: 63 DLIKAKKM--SGRAILLAGGPSTGKTALALAISQE 95 +LI+ KK S A LL G P +GKT+L AI +E Sbjct: 22 ELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEE 56 >5EYN-A nrPDB Length = 323 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Query: 74 AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGL 131 +I LA PS T A+A +E+G V F P + E++S + T+M RA+GL Sbjct: 143 SIALANQPSRSSTFAAIAQMKEVGGYVSFDPNLREEVWSEPQELQATVM----RAVGL 196 >2R6A-A nrPDB Length = 454 Score = 29.3 bits (64), Expect = 3.4, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 17/25 (68%) Query: 75 ILLAGGPSTGKTALALAISQELGPK 99 I++A PS GKTA AL I+Q + K Sbjct: 206 IIVAARPSVGKTAFALNIAQNVATK 230 >5WVI-K nrPDB Length = 428 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 R +LL G P TGKT L A++ K F + GSE Sbjct: 207 RGVLLYGPPGTGKTMLVKAVAN--STKAAFIRVNGSEF 242 >1D2N-A nrPDB Length = 272 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 5/45 (11%) Query: 64 LIKAKKMSGR----AILLAGGPSTGKTALALAISQELG-PKVPFC 103 L++ K S R ++LL G P +GKTALA I++E P + C Sbjct: 52 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEESNFPFIKIC 96 >1IYR-A nrPDB Length = 111 Score = 28.9 bits (63), Expect = 4.4, Method: Compositional matrix adjust. Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 4/46 (8%) Query: 114 EVKKTETLMENFRRAIGLRIKETKEVYEGEVTELT----PEDAENP 155 ++KKTET+ E R + LR+++T+ ++ + P D +NP Sbjct: 58 DIKKTETVQEACERELALRLQQTQSLHSLRSISASKASPPGDLQNP 103 >5VHN-D nrPDB Length = 262 Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust. Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 6/62 (9%) Query: 53 EAREACGVIVDLIKAKKMSG----RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGS 108 E REA + + + K G R +L+ G P GKT LA A++ F +VGS Sbjct: 32 EVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT--TAAFIRVVGS 89 Query: 109 EL 110 E Sbjct: 90 EF 91 >6EF1-K nrPDB Length = 276 Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 R +LL G P TGKT L A++ K F + GSE Sbjct: 55 RGVLLYGPPGTGKTMLVKAVAN--STKAAFIRVNGSEF 90 >3PFI-A nrPDB Length = 338 Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust. Identities = 16/54 (29%), Positives = 25/54 (46%) Query: 47 GFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKV 100 G++GQ ++ V + K + IL +G GKT LA IS E+ + Sbjct: 30 GYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEMSANI 83 >1FNN-A nrPDB Length = 389 Score = 28.9 bits (63), Expect = 4.8, Method: Compositional matrix adjust. Identities = 26/85 (30%), Positives = 39/85 (45%), Gaps = 12/85 (14%) Query: 369 IVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATM----GTETSL-------RYALQ 417 ++R PY KD+I I+ RA L S + D+L + G +T L R A+ Sbjct: 187 VIRFSPYTKDQIFDILLDRAKAG-LAEGSYSEDILQMIADITGAQTPLDTNRGDARLAID 245 Query: 418 LLAPCGILAQTSNRKEIVVNDVNEA 442 +L AQ + RK I DV ++ Sbjct: 246 ILYRSAYAAQQNGRKHIAPEDVRKS 270 >3ZYS-B nrPDB Length = 662 Score = 28.9 bits (63), Expect = 5.1, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 27/141 (19%) Query: 45 EGGFVGQIEAR-EACGVIVDLIKA----KKMSGRAILLAGGPSTGKTALALAISQELGPK 99 E Q E + C ++D ++A + ++ AI + G S+GK+++ A+S P+ Sbjct: 38 ENNLCSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPR 97 Query: 100 ----VPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTP-----E 150 V CPLV +K + + E+ R K + + YE E+++ + Sbjct: 98 GSGIVTRCPLV--------LKLKKLVNEDKWRG-----KVSYQDYEIEISDASEVEKEIN 144 Query: 151 DAENPLGGYGKTISHVIVGLK 171 A+N + G G ISH ++ L+ Sbjct: 145 KAQNAIAGEGMGISHELITLE 165 >5ZQM-A nrPDB Length = 309 Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 2/60 (3%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLM 122 + K + + +L+ G P TGKT LA A++ E K F + S L S ++E L+ Sbjct: 53 EFFKGIRRPWKGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLV 110 >5GTM-A nrPDB Length = 601 Score = 28.9 bits (63), Expect = 5.4, Method: Compositional matrix adjust. Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 27/141 (19%) Query: 45 EGGFVGQIEAR-EACGVIVDLIKA----KKMSGRAILLAGGPSTGKTALALAISQELGPK 99 E Q E + C ++D ++A + ++ AI + G S+GK+++ A+S P+ Sbjct: 6 ENNLCSQYEEKVRPCIDLIDSLRALGVEQDLALPAIAVIGDQSSGKSSVLEALSGVALPR 65 Query: 100 ----VPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTP-----E 150 V CPLV +K + + E+ R K + + YE E+++ + Sbjct: 66 GSGIVTRCPLV--------LKLKKLVNEDKWRG-----KVSYQDYEIEISDASEVEKEIN 112 Query: 151 DAENPLGGYGKTISHVIVGLK 171 A+N + G G ISH ++ L+ Sbjct: 113 KAQNAIAGEGMGISHELITLE 133 >1SXJ-A nrPDB Length = 516 Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust. Identities = 13/25 (52%), Positives = 16/25 (64%) Query: 73 RAILLAGGPSTGKTALALAISQELG 97 RA +L G P GKT A ++QELG Sbjct: 78 RAAMLYGPPGIGKTTAAHLVAQELG 102 >2CHG-A nrPDB Length = 226 Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 75 ILLAGGPSTGKTALALAISQEL 96 +L +G P TGKTA A+A++++L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >1BK4-A nrPDB Length = 337 Score = 28.5 bits (62), Expect = 6.0, Method: Compositional matrix adjust. Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 33/119 (27%) Query: 158 GYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGR--- 214 GY S ++ L G + LDP +IG+ I ++ N +K+ G Sbjct: 163 GYALYGSATMLVLAGGSGVNSFMLDP-----------AIGEFILVDKNV-KIKKKGNIYS 210 Query: 215 -SDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQL 272 ++ YA +FD EY+ +KK+ D N+ P G + V SM+ + Sbjct: 211 LNEGYAKDFDPAVTEYI--------QKKKFPPD---------NSSPYGARYVGSMVADV 252 >2CHV-A nrPDB Length = 319 Score = 28.5 bits (62), Expect = 6.4, Method: Compositional matrix adjust. Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 75 ILLAGGPSTGKTALALAISQEL 96 +L +G P TGKTA A+A++++L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >1IQP-A nrPDB Length = 327 Score = 28.5 bits (62), Expect = 7.2, Method: Compositional matrix adjust. Identities = 12/22 (54%), Positives = 16/22 (72%) Query: 75 ILLAGGPSTGKTALALAISQEL 96 +L AG P GKT ALA+++EL Sbjct: 49 LLFAGPPGVGKTTAALALAREL 70 >5Z6Q-A nrPDB Length = 392 Score = 28.1 bits (61), Expect = 7.6, Method: Compositional matrix adjust. Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 7/54 (12%) Query: 49 VGQIEAREACGVIV-------DLIKAKKMSGRAILLAGGPSTGKTALALAISQE 95 GQ A++A IV +L + R +LL G P GKT LA A++ E Sbjct: 121 AGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE 174 >6EF3-H nrPDB Length = 467 Score = 28.1 bits (61), Expect = 7.9, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ILL G P TGKT A A++ F ++GSEL Sbjct: 244 KGILLYGPPGTGKTLCARAVANRT--DATFIRVIGSEL 279 >6EF0-H nrPDB Length = 257 Score = 27.7 bits (60), Expect = 9.9, Method: Compositional matrix adjust. Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ILL G P TGKT A A++ F ++GSEL Sbjct: 44 KGILLYGPPGTGKTLCARAVANRT--DATFIRVIGSEL 79 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6GEJ-T nrPDB 697 0.0 5FM7-A nrPDB 695 0.0 6QI8-A nrPDB 693 0.0 4WW4-B nrPDB 635 0.0 6QI9-D nrPDB 634 0.0 6GEJ-U nrPDB 615 e-177 2XSZ-A nrPDB 347 9e-96 2XSZ-D nrPDB 322 3e-88 5OUN-A nrPDB 130 2e-30 2CQA-A nrPDB 102 4e-22 Sequences not found previously or not previously below threshold: 2X8A-A nrPDB 47 2e-05 1LV7-A nrPDB 46 4e-05 5UBV-A nrPDB 45 9e-05 1NJG-A nrPDB 44 2e-04 1XWI-A nrPDB 44 2e-04 2ZAO-A nrPDB 44 2e-04 3GLF-B nrPDB 43 2e-04 2R65-A nrPDB 43 3e-04 6CHS-H nrPDB 43 3e-04 1HQC-A nrPDB 42 4e-04 6EPC-H nrPDB 42 6e-04 6MCK-A nrPDB 42 8e-04 5C18-A nrPDB 42 8e-04 2CE7-A nrPDB 41 0.001 5VC7-A nrPDB 41 0.001 3HU1-A nrPDB 41 0.001 4D81-A nrPDB 41 0.001 6EF0-L nrPDB 41 0.001 5G4G-A nrPDB 40 0.002 6FVU-L nrPDB 40 0.002 5WVI-L nrPDB 40 0.002 1IN6-A nrPDB 40 0.002 6AP1-A nrPDB 40 0.002 3EIH-A nrPDB 40 0.003 3H4M-A nrPDB 40 0.003 5VFU-A nrPDB 39 0.003 2QZ4-A nrPDB 39 0.003 6AZ0-A nrPDB 39 0.003 6BLB-A nrPDB 39 0.003 1IY1-A nrPDB 39 0.004 5VHO-A nrPDB 39 0.004 2DHR-A nrPDB 39 0.004 5XMK-A nrPDB 39 0.004 3CF0-A nrPDB 39 0.005 6EF0-H nrPDB 39 0.005 5M32-h nrPDB 39 0.006 5GJQ-J nrPDB 39 0.007 6EF3-H nrPDB 38 0.007 4Z8X-A nrPDB 38 0.008 5VHP-C nrPDB 38 0.008 3GP8-A nrPDB 38 0.009 5Z6Q-A nrPDB 38 0.009 6MSK-B nrPDB 38 0.009 1SXJ-A nrPDB 38 0.010 5VFP-B nrPDB 38 0.010 6B5C-A nrPDB 38 0.010 5VHF-B nrPDB 38 0.010 6MAT-A nrPDB 38 0.012 4XGU-A nrPDB 37 0.013 5VQ9-D nrPDB 37 0.013 5VHO-B nrPDB 37 0.014 3WHK-A nrPDB 37 0.014 4ZPX-A nrPDB 37 0.018 1D2N-A nrPDB 37 0.021 6EF2-J nrPDB 37 0.021 4LGM-A nrPDB 37 0.021 6MDP-A nrPDB 37 0.021 6EF1-K nrPDB 37 0.022 5VHP-E nrPDB 37 0.023 5WVI-K nrPDB 37 0.025 3JCO-J nrPDB 37 0.025 1FNN-A nrPDB 37 0.025 5KWA-A nrPDB 37 0.026 5ZQM-A nrPDB 36 0.029 3M6A-A nrPDB 36 0.029 6HE9-H nrPDB 36 0.031 5EQT-A nrPDB 36 0.031 6HE4-H nrPDB 36 0.033 6MSD-E nrPDB 36 0.033 4LCB-A nrPDB 36 0.033 3K1J-A nrPDB 36 0.038 5E7P-A nrPDB 36 0.039 4NMN-A nrPDB 36 0.045 5VHN-D nrPDB 36 0.045 6B5D-A nrPDB 35 0.048 5WC0-A nrPDB 35 0.051 5VHO-F nrPDB 35 0.055 5VFP-F nrPDB 35 0.058 5T0C-AD nrPDB 35 0.065 2R6A-A nrPDB 35 0.073 6EPD-M nrPDB 35 0.078 3D8B-A nrPDB 35 0.081 6AMN-A nrPDB 35 0.082 5VY8-A nrPDB 35 0.088 6NYV-B nrPDB 35 0.090 3PFI-A nrPDB 34 0.11 4L16-A nrPDB 34 0.12 2CHG-A nrPDB 34 0.13 5W0T-A nrPDB 34 0.13 3JCP-I nrPDB 34 0.13 6FVU-I nrPDB 34 0.14 6G1K-A nrPDB 34 0.14 2CHV-A nrPDB 34 0.16 5A5B-M nrPDB 34 0.18 6EF1-I nrPDB 34 0.19 1SXJ-D nrPDB 34 0.22 4I5O-A nrPDB 34 0.22 2W0M-A nrPDB 33 0.26 1IQP-A nrPDB 33 0.27 2JGR-A nrPDB 33 0.29 1TAF-A nrPDB 33 0.37 3W34-A nrPDB 32 0.39 2R82-A nrPDB 32 0.41 3PVS-A nrPDB 32 0.54 3CM0-A nrPDB 32 0.57 6ED3-A nrPDB 32 0.75 1R6B-X nrPDB 31 0.91 6EM8-A nrPDB 31 1.0 2FM4-A nrPDB 31 1.1 6EF0-M nrPDB 31 1.2 5W36-A nrPDB 31 1.2 2GZA-A nrPDB 30 1.5 5D4W-A nrPDB 30 1.7 6EMW-E nrPDB 30 1.8 1SXJ-C nrPDB 30 2.1 1P4S-A nrPDB 30 2.1 5GKO-A nrPDB 30 2.5 1Y63-A nrPDB 30 2.6 1QVR-A nrPDB 30 2.6 3Q8X-B nrPDB 30 2.9 3H0K-A nrPDB 30 3.2 5Y1Z-C nrPDB 30 3.3 1VBH-A nrPDB 30 3.3 5LKM-A nrPDB 29 3.5 2Q6T-A nrPDB 29 3.9 3CRQ-A nrPDB 29 4.4 5K6H-F nrPDB 29 4.9 4YPL-A nrPDB 29 5.1 4YPN-A nrPDB 29 5.2 5L3R-A nrPDB 29 6.3 3J3U-A nrPDB 29 6.4 1XP8-A nrPDB 29 7.0 5W68-A nrPDB 29 7.1 3PXI-A nrPDB 29 7.3 3PXG-A nrPDB 28 7.3 3ICE-A nrPDB 28 7.6 5ZDH-A nrPDB 28 7.9 4HSE-A nrPDB 28 9.6 >6GEJ-T nrPDB Length = 463 Score = 697 bits (1799), Expect = 0.0, Method: Composition-based stats. Identities = 463/463 (100%), Positives = 463/463 (100%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV Sbjct: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET Sbjct: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 Query: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR Sbjct: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 Query: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK 240 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK Sbjct: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK 240 Query: 241 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV 300 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV Sbjct: 241 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV 300 Query: 301 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP 360 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP Sbjct: 301 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP 360 Query: 361 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA 420 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA Sbjct: 361 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA 420 Query: 421 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL 463 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL Sbjct: 421 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL 463 >5FM7-A nrPDB Length = 464 Score = 695 bits (1794), Expect = 0.0, Method: Composition-based stats. Identities = 326/461 (70%), Positives = 384/461 (83%), Gaps = 8/461 (1%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 MV ISEV+ N + RTAAHTHIKGLGL+ SG+A++ GFVGQ AREACGV Sbjct: 3 MVQISEVRGNTRDH--------RTAAHTHIKGLGLNSSGIAEKQAAGFVGQCAAREACGV 54 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 +VDLIKA KM+GR +LLAGGP TGKTALALAISQELG K+PFCP+ GSE+YS EVKKTE Sbjct: 55 VVDLIKAHKMAGRGVLLAGGPGTGKTALALAISQELGTKIPFCPITGSEIYSTEVKKTEV 114 Query: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 LMENFRRAIGLR++ETK+VYEGEVTE+TPE+AENPLGGYGKTIS +++GLKSA+G K LR Sbjct: 115 LMENFRRAIGLRVRETKDVYEGEVTEMTPEEAENPLGGYGKTISTLLIGLKSARGQKKLR 174 Query: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKK 240 LDP+IYE+IQ+E+V +GDVIYIE NTGA KRVGRSDAYATEFDLE EEYVP+PKGEVHKK Sbjct: 175 LDPSIYEAIQKERVQVGDVIYIETNTGACKRVGRSDAYATEFDLEAEEYVPIPKGEVHKK 234 Query: 241 KEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGV 300 KEIVQDVTLHDLDVANARPQGGQD+ISMMGQL+KPK TEIT+KLR E+NKVV KYI+QGV Sbjct: 235 KEIVQDVTLHDLDVANARPQGGQDIISMMGQLMKPKMTEITDKLRMEINKVVQKYINQGV 294 Query: 301 AELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVP 360 AELIPGVLFIDE +MLDIE FTYLNKALES IAP+VVLASNRG+ T+RG +D+ + HG+P Sbjct: 295 AELIPGVLFIDEAHMLDIECFTYLNKALESPIAPIVVLASNRGIATIRGADDLKAAHGIP 354 Query: 361 PDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLA 420 PD + RLLI+ T PY+ DEIR I+ RA E +Q+ +A+D +A G SLRY LQLLA Sbjct: 355 PDFLQRLLIIPTHPYEPDEIRRIVRIRAQTEGVQLTDAAVDRVAEHGVRISLRYCLQLLA 414 Query: 421 PCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSAN 461 P ILA+ + R ++ V D+ EA+ LFLDA+RS IL ++ Sbjct: 415 PASILARVNGRTQVDVQDIAEAEELFLDARRSANILTSTGE 455 >6QI8-A nrPDB Length = 456 Score = 693 bits (1788), Expect = 0.0, Method: Composition-based stats. Identities = 307/440 (69%), Positives = 371/440 (84%) Query: 22 TRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGP 81 R A+H+H+KGLGLDESG+AK+ G VGQ AREACGVIV+LIK+KKM+GRA+LLAG P Sbjct: 13 QRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKKMAGRAVLLAGPP 72 Query: 82 STGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYE 141 TGKTALALAI+QELG KVPFCP+VGSE+YS E+KKTE LMENFRRAIGLRIKETKEVYE Sbjct: 73 GTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAIGLRIKETKEVYE 132 Query: 142 GEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIY 201 GEVTELTP + ENP+GGYGKTISHVI+GLK+AKGTK L+LDP+I+ES+Q+E+V GDVIY Sbjct: 133 GEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESLQKERVEAGDVIY 192 Query: 202 IEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQG 261 IEAN+GAVKR GR D YATEFDLE EEYVPLPKG+VHKKKEI+QDVTLHDLDVANARPQG Sbjct: 193 IEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTLHDLDVANARPQG 252 Query: 262 GQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIF 321 GQD++SMMGQL+KPKKTEIT+KLR E+NKVV KYIDQG+AEL+PGVLF+DEV+MLDIE F Sbjct: 253 GQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLFVDEVHMLDIECF 312 Query: 322 TYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRTLPYDKDEIR 381 TYL++ALES+IAP+V+ ASNRG +RGTED+ SPHG+P DL+DR++I+RT+ Y E++ Sbjct: 313 TYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMIIRTMLYTPQEMK 372 Query: 382 TIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNE 441 II+ RA E + + AL+ L +GT+T+LRY++QLL P +LA+ + + I V E Sbjct: 373 QIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKINGKDSIEKEHVEE 432 Query: 442 AKLLFLDAKRSTKILETSAN 461 LF DAK S KIL + Sbjct: 433 ISELFYDAKSSAKILADQQD 452 >4WW4-B nrPDB Length = 513 Score = 635 bits (1638), Expect = 0.0, Method: Composition-based stats. Identities = 184/466 (39%), Positives = 293/466 (62%), Gaps = 25/466 (5%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLD-ESGVAKRVEGGFVGQIEAREACG 59 + +++E KE G+N AAH+HI+GLG+D ++ + G VGQ +AR+A Sbjct: 31 VTSVTETKELRGLN--------LIAAHSHIRGLGVDADTLEPRPSSQGLVGQEKARKAAA 82 Query: 60 VIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE 119 V++++IK K++GRA+L+AG PSTGKTA+A+ ++Q LG VPF L SE++S+E+ KTE Sbjct: 83 VVLEMIKQGKIAGRAVLIAGPPSTGKTAIAMGMAQSLGQDVPFTTLAASEIFSLEMSKTE 142 Query: 120 TLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTL 179 L + FR++IG+RIKE E+ EGEV E+ + + GK + +K+ Sbjct: 143 ALTQAFRKSIGVRIKEESEIMEGEVVEIQIDRSVTGGAKQGK------LTIKTTDMEAIY 196 Query: 180 RLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLET--EEYVPLPKGEV 237 + + +++ +E+V GD+I I+ ++G + ++GRS A + ++D +++ P+GE+ Sbjct: 197 DMGSKMIDAMTKERVMAGDIISIDKSSGKITKLGRSYARSRDYDAMGVDTKFLQCPEGEL 256 Query: 238 HKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYID 297 K+KE+V V+LH++DV N+R QG L EI ++R ++N VA++ + Sbjct: 257 QKRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIRSEIRDQINTKVAEWKE 309 Query: 298 QGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPH 357 +G AE++PGVLFIDEV+MLDIE F+Y+N+ALES++AP+V++ASNRG++ +RGT D SPH Sbjct: 310 EGKAEIVPGVLFIDEVHMLDIECFSYINRALESDLAPIVIMASNRGVSRIRGT-DYKSPH 368 Query: 358 GVPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQ 417 G+P D +DR++I+ T PY DE+R I+ RA E + + AL LL +G E LRYA Sbjct: 369 GLPLDFLDRVVIINTHPYTPDELRQILSIRAQEEEVDLTPDALALLTKIGQEAGLRYASN 428 Query: 418 LLAPCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSANYL 463 L+ ++A K++ V DV + LF D RS + ++ S L Sbjct: 429 LITTSQLIAAKRRAKQVGVEDVQRSFKLFYDPARSVRFVQESEKRL 474 >6QI9-D nrPDB Length = 463 Score = 634 bits (1636), Expect = 0.0, Method: Composition-based stats. Identities = 190/460 (41%), Positives = 293/460 (63%), Gaps = 20/460 (4%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 + A ++V E + + R AH+HI+GLGLD++ ++ G VGQ+ AR A GV Sbjct: 4 VTATTKVPEIR-----DVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGV 58 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 ++++I+ K++GRA+L+AG P TGKTA+A+ ++Q LGP PF + GSE++S+E+ KTE Sbjct: 59 VLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEA 118 Query: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLR 180 L + FRR+IG+RIKE E+ EGEV E+ + P G G + + LK+ + Sbjct: 119 LTQAFRRSIGVRIKEETEIIEGEVVEIQID---RPATGTGSKVGKL--TLKTTEMETIYD 173 Query: 181 LDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLET--EEYVPLPKGEVH 238 L + ES+ ++KV GDVI I+ TG + ++GRS A ++D ++V P GE+ Sbjct: 174 LGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQ 233 Query: 239 KKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQ 298 K+KE+V V+LH++DV N+R QG L EI ++R+++N VA++ ++ Sbjct: 234 KRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREE 286 Query: 299 GVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHG 358 G AE+IPGVLFIDEV+MLDIE F++LN+ALES++APV+++A+NRG+T +RGT SPHG Sbjct: 287 GKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTS-YQSPHG 345 Query: 359 VPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQL 418 +P DL+DRLLIV T PY + + + I+ R E +++ A +L +G ETSLRYA+QL Sbjct: 346 IPIDLLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQL 405 Query: 419 LAPCGILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILET 458 + ++ + E+ V+D+ LFLD RST+ ++ Sbjct: 406 ITAASLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKE 445 >6GEJ-U nrPDB Length = 471 Score = 615 bits (1587), Expect = e-177, Method: Composition-based stats. Identities = 187/452 (41%), Positives = 288/452 (63%), Gaps = 17/452 (3%) Query: 15 SSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRA 74 +S+ +++ AAH+HI GLGLDE+ + G VGQ++AR A GVI+ +++ ++GRA Sbjct: 11 TSDLKSLSLIAAHSHITGLGLDENLQPRPTSEGMVGQLQARRAAGVILKMVQNGTIAGRA 70 Query: 75 ILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIK 134 +L+AG PSTGKTALA+ +SQ LG VPF + GSE++S+E+ KTE L + FR++IG++IK Sbjct: 71 VLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSLELSKTEALTQAFRKSIGIKIK 130 Query: 135 ETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKV 194 E E+ EGEV E+ + + GK + +K+ L + + + +EKV Sbjct: 131 EETELIEGEVVEIQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKV 184 Query: 195 SIGDVIYIEANTGAVKRVGRSDAYATEFDLETEE--YVPLPKGEVHKKKEIVQDVTLHDL 252 GDVI I+ +G + ++GRS A + ++D + +V P+GE+ K+K +V V+LH++ Sbjct: 185 LAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKTVVHTVSLHEI 244 Query: 253 DVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAELIPGVLFIDE 312 DV N+R QG L EI ++R ++N VA++ ++G AE++PGVLFIDE Sbjct: 245 DVINSRTQG-------FLALFTGDTGEIRSEVRDQINTKVAEWKEEGKAEIVPGVLFIDE 297 Query: 313 VNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPDLIDRLLIVRT 372 V+MLDIE F+++N+ALE AP+V++A+NRG++ RGT + SPHG+P DL+DR +I+ T Sbjct: 298 VHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGT-NYKSPHGLPLDLLDRSIIITT 356 Query: 373 LPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRK 432 Y++ EI+TI+ RA E +++ S ALDLL G ETSLRY+ L++ +A Sbjct: 357 KSYNEQEIKTILSIRAQEEEVELSSDALDLLTKTGVETSLRYSSNLISVAQQIAMKRKNN 416 Query: 433 EIVVNDVNEAKLLFLDAKRSTKIL-ETSANYL 463 + V DV A LLFLD+ RS K + E + Y+ Sbjct: 417 TVEVEDVKRAYLLFLDSARSVKYVQENESQYI 448 >2XSZ-A nrPDB Length = 367 Score = 347 bits (889), Expect = 9e-96, Method: Composition-based stats. Identities = 133/219 (60%), Positives = 172/219 (78%) Query: 243 IVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAE 302 I+QDVTLHDLDVANARPQGGQD++SMMGQL+KPKKTEIT+KLR E+NKVV KYIDQG+AE Sbjct: 145 IIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAE 204 Query: 303 LIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPD 362 L+PGVLF+DEV+MLDIE FTYL++ALES+IAP+V+ ASNRG +RGTED+ SPHG+P D Sbjct: 205 LVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLD 264 Query: 363 LIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPC 422 L+DR++I+RT+ Y E++ II+ RA E + + AL+ L +GT+T+LRY++QLL P Sbjct: 265 LLDRVMIIRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPA 324 Query: 423 GILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILETSAN 461 +LA+ + + I V E LF DAK S KIL + Sbjct: 325 NLLAKINGKDSIEKEHVEEISELFYDAKSSAKILADQQD 363 Score = 196 bits (497), Expect = 2e-50, Method: Composition-based stats. Identities = 94/153 (61%), Positives = 113/153 (73%), Gaps = 1/153 (0%) Query: 8 KENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKA 67 + + ++ R A+H+H+KGLGLDESG+AK+ G VGQ AREACGVIV+LIK+ Sbjct: 13 RGSKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKS 72 Query: 68 KKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRR 127 KKM+GRA+LLAG P TGKTALALAI+QELG KVPFCP+VGSE+YS E+KKTE LMENFRR Sbjct: 73 KKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRR 132 Query: 128 AIGLRIKETKEVYEGEVTELTPEDAE-NPLGGY 159 AIGLRIKE +VT + A P GG Sbjct: 133 AIGLRIKEGPPGIIQDVTLHDLDVANARPQGGQ 165 >2XSZ-D nrPDB Length = 378 Score = 322 bits (824), Expect = 3e-88, Method: Composition-based stats. Identities = 94/216 (43%), Positives = 143/216 (66%), Gaps = 8/216 (3%) Query: 243 IVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVAKYIDQGVAE 302 +V V+LH++DV N+R QG L EI ++R+++N VA++ ++G AE Sbjct: 153 VVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAKVAEWREEGKAE 205 Query: 303 LIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDVISPHGVPPD 362 +IPGVLFIDEV+MLDIE F++LN+ALES++APV+++A+NRG+T +RGT SPHG+P D Sbjct: 206 IIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTS-YQSPHGIPID 264 Query: 363 LIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPC 422 L+DRLLIV T PY + + + I+ R E +++ A +L +G ETSLRYA+QL+ Sbjct: 265 LLDRLLIVSTTPYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAA 324 Query: 423 GILAQTSNRKEIVVNDVNEAKLLFLDAKRSTKILET 458 ++ + E+ V+D+ LFLD RST+ ++ Sbjct: 325 SLVCRKRKGTEVQVDDIKRVYSLFLDESRSTQYMKE 360 Score = 194 bits (493), Expect = 6e-50, Method: Composition-based stats. Identities = 61/135 (45%), Positives = 94/135 (69%), Gaps = 5/135 (3%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 + A ++V E + + R AH+HI+GLGLD++ ++ G VGQ+ AR A GV Sbjct: 19 VTATTKVPEIR-----DVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGV 73 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 ++++I+ K++GRA+L+AG P TGKTA+A+ ++Q LGP PF + GSE++S+E+ KTE Sbjct: 74 VLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEA 133 Query: 121 LMENFRRAIGLRIKE 135 L + FRR+IG+RIKE Sbjct: 134 LTQAFRRSIGVRIKE 148 >5OUN-A nrPDB Length = 107 Score = 130 bits (326), Expect = 2e-30, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 8/109 (7%) Query: 136 TKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVS 195 E+ EGEV E+ + + GK + +K+ L + + + +EKV Sbjct: 5 ETELIEGEVVEIQIDRSITGGHKQGK------LTIKTTDMETIYELGNKMIDGLTKEKVL 58 Query: 196 IGDVIYIEANTGAVKRVGRSDAYATEFDLETEE--YVPLPKGEVHKKKE 242 GDVI I+ +G + ++GRS A + ++D + +V P+GE+ K+K Sbjct: 59 AGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQCPEGELQKRKT 107 >2CQA-A nrPDB Length = 95 Score = 102 bits (254), Expect = 4e-22, Method: Composition-based stats. Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%) Query: 134 KETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREK 193 KE E+ EGEV E+ + P G G + + LK+ + L + ES+ ++K Sbjct: 8 KEETEIIEGEVVEIQID---RPATGTGSKVGKL--TLKTTEMETIYDLGTKMIESLTKDK 62 Query: 194 VSIGDVIYIEANTGAVKRVGRSDAYAT 220 V GDVI I+ TG + ++GRS A Sbjct: 63 VQAGDVITIDKATGKISKLGRSFTRAR 89 >2X8A-A nrPDB Length = 274 Score = 47.0 bits (110), Expect = 2e-05, Method: Composition-based stats. Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 6/98 (6%) Query: 74 AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGLR 132 +LLAG P GKT LA A++ E G + F + G EL ++ V ++E + + F+RA + Sbjct: 46 GVLLAGPPGCGKTLLAKAVANESG--LNFISVKGPELLNMYVGESERAVRQVFQRA---K 100 Query: 133 IKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGL 170 ++ EV L P ++ G + ++ ++ + Sbjct: 101 NSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEM 138 >1LV7-A nrPDB Length = 257 Score = 45.8 bits (107), Expect = 4e-05, Method: Composition-based stats. Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 9/75 (12%) Query: 42 KRVEGGFVGQIEAREACGVIVDLIKA----KKMSGR---AILLAGGPSTGKTALALAISQ 94 K G EA+E +V+ ++ +K+ G+ +L+ G P TGKT LA AI+ Sbjct: 8 KTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 67 Query: 95 ELGPKVPFCPLVGSE 109 E KVPF + GS+ Sbjct: 68 E--AKVPFFTISGSD 80 >5UBV-A nrPDB Length = 246 Score = 44.7 bits (104), Expect = 9e-05, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 11/68 (16%) Query: 50 GQIEAREACGVIVDLIKA--------KKMSGRAILLAGGPSTGKTALALAISQELGPKVP 101 G EA+E +V+ ++ K+ + +LL G P TGKT LA A++ E G VP Sbjct: 10 GCDEAKEELQELVEFLRNPEKFSNLGGKLP-KGVLLVGPPGTGKTLLARAVAGEAG--VP 66 Query: 102 FCPLVGSE 109 F + GSE Sbjct: 67 FFYMSGSE 74 >1NJG-A nrPDB Length = 250 Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 47/113 (41%), Gaps = 15/113 (13%) Query: 307 VLFIDEVNMLDIEIFTYLNKALESNIAPV-VVLASNRGMTTVRGTEDVISPHGVPPDLID 365 V IDEV+ML F L K LE V +LA+ P +P ++ Sbjct: 129 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLAT-------------TDPQKLPVTILS 175 Query: 366 RLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQL 418 R L D ++IR +E E + E AL LLA E SLR AL L Sbjct: 176 RCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 227 >1XWI-A nrPDB Length = 322 Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats. Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 20/135 (14%) Query: 46 GGFVGQIEAREAC--GVIV-----DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGP 98 G A+EA VI+ L K+ R ILL G P TGK+ LA A++ E Sbjct: 12 SDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANN 71 Query: 99 KVPFCPLVGSELYSVEVKKTETLMEN-FRRAIGLRIKETKEVYEGEVTELTPEDAENPLG 157 F + S+L S + ++E L++N F+ A +E K + ++ ++ G Sbjct: 72 ST-FFSISSSDLVSKWLGESEKLVKNLFQLA-----RENKPSI------IFIDEIDSLCG 119 Query: 158 GYGKTISHVIVGLKS 172 + S +K+ Sbjct: 120 SRSENESEAARRIKT 134 >2ZAO-A nrPDB Length = 444 Score = 43.5 bits (101), Expect = 2e-04, Method: Composition-based stats. Identities = 40/173 (23%), Positives = 68/173 (39%), Gaps = 22/173 (12%) Query: 8 KENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREAC--GVIV--- 62 K N + S + ++G + E G A+EA VI+ Sbjct: 98 KGNDSDGEAESDDPEKKKLQNQLQGAIVIER--PNVKWSDVAGLEGAKEALKEAVILPIK 155 Query: 63 --DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 L K+ R ILL G P TGK+ LA A++ E F + S+L S + ++E Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAVATEANNST-FFSISSSDLVSKWLGESEK 214 Query: 121 LMEN-FRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKS 172 L++N F+ A +E K + ++ ++ G + S +K+ Sbjct: 215 LVKNLFQLA-----RENKPSI------IFIDEIDSLCGSRSENESEAARRIKT 256 >3GLF-B nrPDB Length = 395 Score = 43.1 bits (100), Expect = 2e-04, Method: Composition-based stats. Identities = 37/113 (32%), Positives = 47/113 (41%), Gaps = 15/113 (13%) Query: 307 VLFIDEVNMLDIEIFTYLNKALESNIAPV-VVLASNRGMTTVRGTEDVISPHGVPPDLID 365 V IDEV+ML F L K LE V +LA+ P +P ++ Sbjct: 144 VYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLAT-------------TDPQKLPVTILS 190 Query: 366 RLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQL 418 R L D ++IR +E E + E AL LLA E SLR AL L Sbjct: 191 RCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLAR-AAEGSLRDALSL 242 >2R65-A nrPDB Length = 268 Score = 43.1 bits (100), Expect = 3e-04, Method: Composition-based stats. Identities = 25/68 (36%), Positives = 32/68 (47%), Gaps = 9/68 (13%) Query: 48 FVGQIEAREACGVIVDLIKA-------KKMSGRAILLAGGPSTGKTALALAISQELGPKV 100 G EA+E IVD +K + +LL G P TGKT LA A++ E V Sbjct: 13 MAGNEEAKEEVVEIVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAVAGE--AHV 70 Query: 101 PFCPLVGS 108 PF + GS Sbjct: 71 PFFSMGGS 78 >6CHS-H nrPDB Length = 819 Score = 42.8 bits (99), Expect = 3e-04, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 31/186 (16%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 R +LL G P TGKT +A A++ E G F + G E+ S ++E+ N R+A Sbjct: 255 RGVLLYGPPGTGKTLMARAVANETGAF--FFLINGPEIMSKMAGESES---NLRKAF--- 306 Query: 133 IKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQRE 192 E E + + ++ ++ K G R+ + + + Sbjct: 307 --EEAE--KNSPAIIFIDEIDSIAPKREK-----------TNGEVERRVVSQLLTLM--D 349 Query: 193 KVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVH------KKKEIVQD 246 + + + A T + + FD E + +P P G + K ++ D Sbjct: 350 GMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPTGRLEILQIHTKNMKLADD 409 Query: 247 VTLHDL 252 V L + Sbjct: 410 VDLEQI 415 Score = 41.2 bits (95), Expect = 9e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 +K R +L G P TGKT LA A++ E F + G EL S+ ++E+ Sbjct: 519 KFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAAN--FISVKGPELLSMWFGESES 574 >1HQC-A nrPDB Length = 324 Score = 42.4 bits (98), Expect = 4e-04, Method: Composition-based stats. Identities = 19/63 (30%), Positives = 33/63 (52%) Query: 35 LDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQ 94 +++ + + ++GQ ++ V ++ KA+K +LL G P GKT LA I+ Sbjct: 1 MEDLALRPKTLDEYIGQERLKQKLRVYLEAAKARKEPLEHLLLFGPPGLGKTTLAHVIAH 60 Query: 95 ELG 97 ELG Sbjct: 61 ELG 63 Score = 37.0 bits (84), Expect = 0.018, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 62/156 (39%), Gaps = 14/156 (8%) Query: 286 QEVNKVVAKYIDQGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMT 345 ++ ++A +++G +LFIDE++ L + +L A+E + +V+ T Sbjct: 78 GDLAAILANSLEEG------DILFIDEIHRLSRQAEEHLYPAMEDFVMDIVIGQGPAART 131 Query: 346 ------TVRGTEDVISPHGVPPDLIDRLLIVRTLP-YDKDEIRTIIERRATVERLQVESS 398 P + L+ R IV L Y +E+ + R A + +++ Sbjct: 132 IRLELPRFTLIGATTRPGLITAPLLSRFGIVEHLEYYTPEELAQGVMRDARLLGVRITEE 191 Query: 399 ALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEI 434 A + + ++R A +L AQ + + I Sbjct: 192 AALEIGRR-SRGTMRVAKRLFRRVRDFAQVAGEEVI 226 >6EPC-H nrPDB Length = 433 Score = 42.0 bits (97), Expect = 6e-04, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKK-TETLMENFRRAIGL 131 + +LL G P TGKT A A++ F P++GSEL V + + E F A Sbjct: 210 KGVLLFGPPGTGKTLCARAVANR--TDACFIPVIGSELVQKYVGEGARMVRELFEMA--- 264 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 R K+ ++ E+ + ++ GG + ++ + G Sbjct: 265 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 308 >6MCK-A nrPDB Length = 606 Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRA 128 R ILL G P TGKT +A A++ E G F + G E+ S ++E+ L + F A Sbjct: 31 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 85 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-L 121 +K + +L G P GKT LA AI+ E F + G EL ++ ++E + Sbjct: 294 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEANV 351 Query: 122 MENFRRA 128 E F +A Sbjct: 352 REIFDKA 358 >5C18-A nrPDB Length = 785 Score = 41.6 bits (96), Expect = 8e-04, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRA 128 R ILL G P TGKT +A A++ E G F + G E+ S ++E+ L + F A Sbjct: 238 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 292 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-L 121 +K + +L G P GKT LA AI+ E F + G EL ++ ++E + Sbjct: 501 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEANV 558 Query: 122 MENFRRA 128 E F +A Sbjct: 559 REIFDKA 565 >2CE7-A nrPDB Length = 476 Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 9/71 (12%) Query: 50 GQIEAREACGVIVDLIKA----KKMSGR---AILLAGGPSTGKTALALAISQELGPKVPF 102 G EA E +V+ +K ++ R ILL G P TGKT LA A++ E VPF Sbjct: 20 GAEEAIEELKEVVEFLKDPSKFNRIGARMPKGILLVGPPGTGKTLLARAVAGE--ANVPF 77 Query: 103 CPLVGSELYSV 113 + GS+ + Sbjct: 78 FHISGSDFVEL 88 >5VC7-A nrPDB Length = 564 Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGL 131 + ++L G P TGKT +A A++ E G F + G E+ S ++E L E F +A Sbjct: 44 KGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKAEET 101 Query: 132 -----------RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKT 178 I +E +GEV + G K HVIV + + Sbjct: 102 APSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGM-KERGHVIVIGATNRIDAI 158 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 6/98 (6%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGL 131 + LL G P GKT LA A++ E F + G E+ S V ++E + E F++A + Sbjct: 321 KGFLLYGPPGVGKTLLAKAVATE--SNANFISIKGPEVLSKWVGESEKAIREIFKKAKQV 378 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVG 169 V+ E+ + P G + I + ++ Sbjct: 379 ---APAIVFLDEIDSIAPRRGTTSDSGVTERIVNQLLT 413 >3HU1-A nrPDB Length = 489 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRA 128 R ILL G P TGKT +A A++ E G F + G E+ S ++E+ L + F A Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAF--FFLINGPEIMSKLAGESESNLRKAFEEA 293 >4D81-A nrPDB Length = 283 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 24/93 (25%), Positives = 40/93 (43%), Gaps = 9/93 (9%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRAIGL 131 R ILL G P GKT +A A++ EL F + + + S + + E + + F+ A L Sbjct: 46 RGILLYGPPGCGKTMIAAAVANEL--DSEFIHVDAASIMSKWLGEAEKNVAKIFKTAREL 103 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTIS 164 KE K + ++ + L Y + Sbjct: 104 SKKENKPAI------IFIDELDALLASYTSEVG 130 >6EF0-L nrPDB Length = 273 Score = 40.8 bits (94), Expect = 0.001, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 + +LL G P TGKT LA A++ +G F P G Sbjct: 53 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 87 >5G4G-A nrPDB Length = 721 Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 31/118 (26%), Positives = 47/118 (39%), Gaps = 15/118 (12%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGL 131 + ++L G P TGKT +A A++ E G F + G E+ S ++E L E F +A Sbjct: 220 KGVILYGPPGTGKTLIARAVANESGAN--FLSINGPEIMSKYYGQSEQKLREIFSKAEET 277 Query: 132 -----------RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKT 178 I +E +GEV + G K HVIV + + Sbjct: 278 APSIIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGM-KERGHVIVIGATNRIDAI 334 Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRA 128 + LL G P GKT LA A++ E F + G E+ S V ++E + E F++A Sbjct: 497 KGFLLYGPPGVGKTLLAKAVATE--SNANFISIKGPEVLSKWVGESEKAIREIFKKA 551 >6FVU-L nrPDB Length = 388 Score = 40.4 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 + +LL G P TGKT LA A++ +G F P G Sbjct: 168 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 202 >5WVI-L nrPDB Length = 437 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 15/35 (42%), Positives = 20/35 (57%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVG 107 + +LL G P TGKT LA A++ +G F P G Sbjct: 216 KGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASG 250 >1IN6-A nrPDB Length = 334 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 29/65 (44%) Query: 40 VAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPK 99 + + F+GQ ++ + ++ K + +LLAG P G+T LA I+ EL Sbjct: 19 LRPKSLDEFIGQENVKKKLSLALEAAKMRGEVLDHVLLAGPPGLGRTTLAHIIASELQTN 78 Query: 100 VPFCP 104 + Sbjct: 79 IHVTS 83 Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 65/160 (40%), Gaps = 34/160 (21%) Query: 307 VLFIDEVNMLDIEIFTYLNKALES------------------NIAPVVVLASNRGMTTVR 348 VLFIDE++ L+ + L A+E +I P ++ G TT Sbjct: 105 VLFIDEIHRLNKAVEELLYSAIEDFQIDIMIGKGPSAKSIRIDIQPFTLV----GATTRS 160 Query: 349 G--TEDVISPHGVPPDLIDRLLIVRTLPYDKDEIRTIIERRATVERLQVESSALDLLATM 406 G + + S G+ +L Y E++ II+R A++ +++E +A +++A Sbjct: 161 GLLSSPLRSRFGIILEL---------DFYTVKELKEIIKRAASLMDVEIEDAAAEMIAKR 211 Query: 407 GTETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLLF 446 + + R A++L + I + V + + Sbjct: 212 -SRGTPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL 250 >6AP1-A nrPDB Length = 519 Score = 40.1 bits (92), Expect = 0.002, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 60/149 (40%), Gaps = 22/149 (14%) Query: 34 GLDESGVAKRVE---GGFVGQIEAREAC--GVIV-----DLIKAKKMSGRAILLAGGPST 83 L + ++++ G A+EA VI+ L K + ILL G P T Sbjct: 19 ALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGT 78 Query: 84 GKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGE 143 GK+ LA A++ E F + S+L S + ++E L+ + + +E K Sbjct: 79 GKSYLAKAVATEANST--FFSVSSSDLVSKWMGESEKLV----KQLFAMARENKPSI--- 129 Query: 144 VTELTPEDAENPLGGYGKTISHVIVGLKS 172 + ++ + G G+ S +K+ Sbjct: 130 ---IFIDEVDALTGTRGEGESEASRRIKT 155 >3EIH-A nrPDB Length = 340 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 22/149 (14%) Query: 34 GLDESGVAKRVE---GGFVGQIEAREAC--GVIV-----DLIKAKKMSGRAILLAGGPST 83 L + ++++ G A+EA VI+ L K + ILL G P T Sbjct: 21 ALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGT 80 Query: 84 GKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGE 143 GK+ LA A++ E F + S+L S + ++E L+ + + +E K Sbjct: 81 GKSYLAKAVATEANST--FFSVSSSDLVSKWMGESEKLV----KQLFAMARENKPSI--- 131 Query: 144 VTELTPEDAENPLGGYGKTISHVIVGLKS 172 + + + G G+ S +K+ Sbjct: 132 ---IFIDQVDALTGTRGEGESEASRRIKT 157 >3H4M-A nrPDB Length = 285 Score = 39.7 bits (91), Expect = 0.003, Method: Composition-based stats. Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 4/103 (3%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ILL G P TGKT LA A++ E F +VGSEL + + +L+++ + + Sbjct: 52 KGILLYGPPGTGKTLLAKAVATE--TNATFIRVVGSELVKKFIGEGASLVKDIFKL--AK 107 Query: 133 IKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 K ++ E+ + + + GG + ++ L G Sbjct: 108 EKAPSIIFIDEIDAIAAKRTDALTGGDREVQRTLMQLLAEMDG 150 >5VFU-A nrPDB Length = 361 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKK-TETLMENFRRAIGL 131 + +LL G P TGKT A A++ F ++GSEL V + + E F A Sbjct: 138 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSELVQKYVGEGARMVRELFEMA--- 192 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 R K+ ++ E+ + ++ GG + ++ + G Sbjct: 193 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 236 >2QZ4-A nrPDB Length = 262 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 ++ + LL G P GKT LA A++ E +VPF + G+E Sbjct: 31 FLQLGAKVPKGALLLGPPGCGKTLLAKAVATE--AQVPFLAMAGAE 74 >6AZ0-A nrPDB Length = 439 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 26/68 (38%), Positives = 32/68 (47%), Gaps = 11/68 (16%) Query: 50 GQIEAREACGVIVDLIKA--------KKMSGRAILLAGGPSTGKTALALAISQELGPKVP 101 G EAR IVD +K K+ + +LL G P TGKT LA A + E G Sbjct: 7 GCDEARAELEEIVDFLKDPTKYESLGGKLP-KGVLLTGPPGTGKTLLARATAGEAGVDFF 65 Query: 102 FCPLVGSE 109 F + GSE Sbjct: 66 F--MSGSE 71 >6BLB-A nrPDB Length = 355 Score = 39.3 bits (90), Expect = 0.003, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%) Query: 35 LDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQ 94 LD + ++ ++GQ RE + + + ++ + L+ G P GKT LA I+Q Sbjct: 23 LDRAIRPLKLAD-YIGQPSVREQMELFIHAARGRQEALDHTLIFGPPGLGKTTLANIIAQ 81 Query: 95 ELGPKV 100 E+G + Sbjct: 82 EMGVSI 87 >1IY1-A nrPDB Length = 254 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%) Query: 41 AKRVEGGFVGQIEAREACGVIVDLIKA----KKMSGR---AILLAGGPSTGKTALALAIS 93 K G EA+E IV+ +K +M R +LL G P GKT LA A++ Sbjct: 11 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVA 70 Query: 94 QELGPKVPFCPLVGSE 109 E +VPF GS+ Sbjct: 71 GE--ARVPFITASGSD 84 >5VHO-A nrPDB Length = 267 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 25/104 (24%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKK-TETLMENFRRAIGL 131 + +LL G P TGKT A A++ F ++GSEL V + + E F A Sbjct: 53 KGVLLFGPPGTGKTLCARAVANR--TDACFIRVIGSELVQKYVGEGARMVRELFEMA--- 107 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 R K+ ++ E+ + ++ GG + ++ + G Sbjct: 108 RTKKACLIFFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDG 151 >2DHR-A nrPDB Length = 499 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%) Query: 41 AKRVEGGFVGQIEAREACGVIVDLIKA----KKMSGR---AILLAGGPSTGKTALALAIS 93 K G EA+E IV+ +K +M R +LL G P GKT LA A++ Sbjct: 26 PKVTFKDVAGAEEAKEELKEIVEFLKNPSRFHEMGARIPKGVLLVGPPGVGKTHLARAVA 85 Query: 94 QELGPKVPFCPLVGSE 109 E +VPF GS+ Sbjct: 86 GE--ARVPFITASGSD 99 >5XMK-A nrPDB Length = 437 Score = 39.3 bits (90), Expect = 0.004, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 22/149 (14%) Query: 34 GLDESGVAKRVE---GGFVGQIEAREAC--GVIV-----DLIKAKKMSGRAILLAGGPST 83 L + ++++ G A+EA VI+ L K + ILL G P T Sbjct: 118 ALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGT 177 Query: 84 GKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGE 143 GK+ LA A++ E F + S+L S + ++E L+ + + +E K Sbjct: 178 GKSYLAKAVATE--ANSTFFSVSSSDLVSKWMGESEKLV----KQLFAMARENKPSI--- 228 Query: 144 VTELTPEDAENPLGGYGKTISHVIVGLKS 172 + + + G G+ S +K+ Sbjct: 229 ---IFIDQVDALTGTRGEGESEASRRIKT 254 >3CF0-A nrPDB Length = 301 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-L 121 +K + +L G P GKT LA AI+ E F + G EL ++ ++E + Sbjct: 40 KFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQAN--FISIKGPELLTMWFGESEANV 97 Query: 122 MENFRRA 128 E F +A Sbjct: 98 REIFDKA 104 >6EF0-H nrPDB Length = 257 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKK-TETLMENFRRAIGL 131 + ILL G P TGKT A A++ F ++GSEL V + + E F A Sbjct: 44 KGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSELVQKYVGEGARMVRELFEMA--- 98 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 R K+ ++ E+ + ++ GG + ++ + G Sbjct: 99 RTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDG 142 >5M32-h nrPDB Length = 355 Score = 38.5 bits (88), Expect = 0.006, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + +LL G P TGKT LA A++ F + GSEL + + ++ R + + Sbjct: 147 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSELVQKFIGEGARMV----RELFVM 200 Query: 133 IKETKE--VYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 +E ++ E+ + E GG + ++ L G Sbjct: 201 AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 245 >5GJQ-J nrPDB Length = 406 Score = 38.5 bits (88), Expect = 0.007, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + +LL G P TGKT LA A++ F + GSEL + + ++ R + + Sbjct: 184 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSELVQKFIGEGARMV----RELFVM 237 Query: 133 IKETKE--VYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 +E ++ E+ + E GG + ++ L G Sbjct: 238 AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 282 >6EF3-H nrPDB Length = 467 Score = 38.1 bits (87), Expect = 0.007, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKK-TETLMENFRRAIGL 131 + ILL G P TGKT A A++ F ++GSEL V + + E F A Sbjct: 244 KGILLYGPPGTGKTLCARAVANR--TDATFIRVIGSELVQKYVGEGARMVRELFEMA--- 298 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 R K+ ++ E+ + ++ GG + ++ + G Sbjct: 299 RTKKACIIFFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDG 342 >4Z8X-A nrPDB Length = 497 Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 5/50 (10%) Query: 63 DLIKAKKMSGR---AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 D +K +K+ GR +LL G P GKT LA AI+ E VPF + GS+ Sbjct: 39 DPVKFQKLGGRPPKGVLLYGEPGVGKTLLAKAIAGE--AHVPFISVSGSD 86 >5VHP-C nrPDB Length = 266 Score = 38.1 bits (87), Expect = 0.008, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + +LL G P TGKT LA A++ F + GSEL + + ++ R + + Sbjct: 55 KGVLLYGPPGTGKTLLARAVAHH--TDCTFIRVSGSELVQKFIGEGARMV----RELFVM 108 Query: 133 IKETKE--VYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 +E ++ E+ + E GG + ++ L G Sbjct: 109 AREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDG 153 >3GP8-A nrPDB Length = 574 Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats. Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 13/79 (16%) Query: 32 GLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALA 91 G G D+ V K+ G + + ++D + R ++L GGP TGK+ A Sbjct: 174 GAGNDDWAVPKKARKGLSEEQAS------VLDQLAGH----RLVVLTGGPGTGKSTTTKA 223 Query: 92 I---SQELGPKVPFCPLVG 107 + ++ LG +V C G Sbjct: 224 VADLAESLGLEVGLCAPTG 242 >5Z6Q-A nrPDB Length = 392 Score = 38.1 bits (87), Expect = 0.009, Method: Composition-based stats. Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 9/85 (10%) Query: 48 FVGQIEAREACGVIV-------DLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKV 100 GQ A++A IV +L + R +LL G P GKT LA A++ E Sbjct: 120 IAGQDLAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAE--SNA 177 Query: 101 PFCPLVGSELYSVEVKKTETLMENF 125 F + + L S V + E L+ Sbjct: 178 TFFNISAASLTSKYVGEGEKLVRAL 202 >6MSK-B nrPDB Length = 440 Score = 37.8 bits (86), Expect = 0.009, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 38/201 (18%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ++L G P TGKT LA A++ + F +VGSEL + L+ R Sbjct: 220 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVREL-----FR 272 Query: 133 IKET---KEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESI 189 + E V+ E+ + + ++ GG + ++ L G + R D + + Sbjct: 273 VAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-RGDVKVIMAT 331 Query: 190 QREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQ---- 245 R IE A+ R GR D EF PLP + K+ + Sbjct: 332 NR----------IETLDPALIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRM 372 Query: 246 ----DVTLHDLDVANARPQGG 262 DVTL DL +A G Sbjct: 373 TLADDVTLDDLIMAKDDLSGA 393 >1SXJ-A nrPDB Length = 516 Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats. Identities = 14/35 (40%), Positives = 18/35 (51%) Query: 66 KAKKMSGRAILLAGGPSTGKTALALAISQELGPKV 100 K RA +L G P GKT A ++QELG + Sbjct: 71 KDGSGVFRAAMLYGPPGIGKTTAAHLVAQELGYDI 105 >5VFP-B nrPDB Length = 389 Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 38/201 (18%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ++L G P TGKT LA A++ + F +VGSEL + L+ R Sbjct: 169 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVREL-----FR 221 Query: 133 IKET---KEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESI 189 + E V+ E+ + + ++ GG + ++ L G + R D + + Sbjct: 222 VAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-RGDVKVIMAT 280 Query: 190 QREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQ---- 245 R IE A+ R GR D EF PLP + K+ + Sbjct: 281 NR----------IETLDPALIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRM 321 Query: 246 ----DVTLHDLDVANARPQGG 262 DVTL DL +A G Sbjct: 322 TLADDVTLDDLIMAKDDLSGA 342 >6B5C-A nrPDB Length = 307 Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 + +L+ G P TGKT LA A++ E G F + S L S ++E L+ Sbjct: 59 KGVLMVGPPGTGKTMLAKAVATECG--TTFFNVSSSTLTSKYRGESEKLVR 107 >5VHF-B nrPDB Length = 340 Score = 37.8 bits (86), Expect = 0.010, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 38/201 (18%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ++L G P TGKT LA A++ + F +VGSEL + L+ R Sbjct: 128 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVREL-----FR 180 Query: 133 IKET---KEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESI 189 + E V+ E+ + + ++ GG + ++ L G + R D + + Sbjct: 181 VAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-RGDVKVIMAT 239 Query: 190 QREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQ---- 245 R IE A+ R GR D EF PLP + K+ + Sbjct: 240 NR----------IETLDPALIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRM 280 Query: 246 ----DVTLHDLDVANARPQGG 262 DVTL DL +A G Sbjct: 281 TLADDVTLDDLIMAKDDLSGA 301 >6MAT-A nrPDB Length = 813 Score = 37.8 bits (86), Expect = 0.012, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 56/135 (41%), Gaps = 11/135 (8%) Query: 74 AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGLR 132 ILL G P GKT +A A++ E K F + G EL + V ++E + + F RA + Sbjct: 537 GILLWGPPGCGKTLVAKAVANE--SKANFISIKGPELLNKYVGESERAVRQLFSRA---K 591 Query: 133 IKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLK-SAKGTKTLRLD----PTIYE 187 ++ ++ L P ++ + ++ ++ L + + P + + Sbjct: 592 SSAPCILFFDQMDALVPRRDDSLSDASARVVNTLLTELDGVGDRSGIYVIGATNRPDMID 651 Query: 188 SIQREKVSIGDVIYI 202 R +G IY+ Sbjct: 652 EAIRRPGRLGTSIYV 666 Score = 32.0 bits (71), Expect = 0.54, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Query: 74 AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 +LL G GKT LA AI+ +G V F P+ + Sbjct: 238 GVLLHGPSGCGKTTLAHAIAGSIG--VAFIPVSAPSV 272 >4XGU-A nrPDB Length = 424 Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 16/24 (66%) Query: 73 RAILLAGGPSTGKTALALAISQEL 96 R ILL G P TGKT+L ++Q L Sbjct: 173 RLILLTGPPGTGKTSLCKGLAQHL 196 >5VQ9-D nrPDB Length = 432 Score = 37.4 bits (85), Expect = 0.013, Method: Composition-based stats. Identities = 13/24 (54%), Positives = 18/24 (75%) Query: 73 RAILLAGGPSTGKTALALAISQEL 96 R +LL G P TGKT+L A++Q+L Sbjct: 173 RVVLLHGPPGTGKTSLCKALAQKL 196 >5VHO-B nrPDB Length = 267 Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats. Identities = 49/201 (24%), Positives = 76/201 (37%), Gaps = 38/201 (18%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ++L G P TGKT LA A++ + F +VGSEL + L+ R Sbjct: 54 KGVILYGPPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVREL-----FR 106 Query: 133 IKET---KEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESI 189 + E V+ E+ + + ++ GG + ++ L G + R D + + Sbjct: 107 VAEEHAPSIVFIDEIDAIGTKRYDSNSGGEREIQRTMLELLNQLDGFDS-RGDVKVIMAT 165 Query: 190 QREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQ---- 245 R IE A+ R GR D EF PLP + K+ + Sbjct: 166 NR----------IETLDPALIRPGRID-RKIEF--------PLPDEKTKKRIFQIHTSRM 206 Query: 246 ----DVTLHDLDVANARPQGG 262 DVTL DL +A G Sbjct: 207 TLADDVTLDDLIMAKDDLSGA 227 >3WHK-A nrPDB Length = 270 Score = 37.4 bits (85), Expect = 0.014, Method: Composition-based stats. Identities = 27/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLM-ENFRRAIGL 131 + +LL G P GKT +A AI+ E+ F +VGSEL + + L+ E F A Sbjct: 52 KGVLLYGPPGCGKTLMAKAIAHEV--NATFIRVVGSELVRKYIGEGARLVHELFELA--- 106 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 + K ++ E+ + + + GG + ++ L G Sbjct: 107 KEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDG 150 >4ZPX-A nrPDB Length = 413 Score = 37.0 bits (84), Expect = 0.018, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Query: 36 DESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQE 95 +E V +++ +GQ A V++IK R +LL G P TGK+ L A+++ Sbjct: 31 EEIEVPEKLIDQVIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAEL 83 Query: 96 LGPKV 100 L + Sbjct: 84 LPTET 88 Score = 29.7 bits (65), Expect = 2.5, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 32/172 (18%) Query: 306 GVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTE---DVISPHGVPPD 362 GVLFIDE+ L +++ L A++ P+ + VR D + D Sbjct: 240 GVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLD 299 Query: 363 LIDR---------------LLIVRTLPYDKDEIRTIIERRATV------------ERL-Q 394 +D+ + + T+P + R +++ A E + + Sbjct: 300 TVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEE 359 Query: 395 VESSALDLLATMG-TETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLL 445 + A G LR ++ G +A +K + DV EA + Sbjct: 360 IVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKM 411 >1D2N-A nrPDB Length = 272 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 64 LIKAKKMSGR----AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE--LYSVEVKK 117 L++ K S R ++LL G P +GKTALA I++E PF + + + E K Sbjct: 52 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSETAK 109 Query: 118 TETLMENF 125 + + + F Sbjct: 110 CQAMKKIF 117 >6EF2-J nrPDB Length = 262 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ++L G P TGKT LA A++ F + G+EL + + ++ R + + Sbjct: 40 KGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAELVQKYIGEGSRMV----RELFVM 93 Query: 133 IKETKE--VYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 +E ++ E+ + E GG + ++ L G Sbjct: 94 AREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDG 138 >4LGM-A nrPDB Length = 295 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 60/164 (36%), Gaps = 22/164 (13%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 R ILL G P GKT +A A++ E+ F L + + S + + E + N + Sbjct: 58 RGILLYGPPGCGKTMIAAAVANEI--DSIFMQLDAASVMSKWLGEAEKNVANV-----FK 110 Query: 133 IKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQRE 192 + + + + + + + LG Y + G + +D + + + Sbjct: 111 MAREESKKQNKPAIIFIDQLDALLGVYSTEVG----GEARVRNQFLKEMD-GLLDKSENY 165 Query: 193 KVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGE 236 KV Y+ T R+ + + YVPLP E Sbjct: 166 KV------YVIGATNKPWRLDEAFLRR----FQKRIYVPLPDYE 199 >6MDP-A nrPDB Length = 768 Score = 36.6 bits (83), Expect = 0.021, Method: Composition-based stats. Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%) Query: 64 LIKAKKMSGR----AILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE--LYSVEVKK 117 L++ K S R ++LL G P +GKTALA I++E PF + + + E K Sbjct: 548 LVQQTKNSDRTPLVSVLLEGPPHSGKTALAAKIAEE--SNFPFIKICSPDKMIGFSETAK 605 Query: 118 TETLMENF 125 + + + F Sbjct: 606 CQAMKKIF 613 Score = 34.7 bits (78), Expect = 0.100, Method: Composition-based stats. Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 + ILL G P GKT LA I + L + P + G E+ + V ++E Sbjct: 278 KGILLYGPPGCGKTLLARQIGKMLNAREP-KVVNGPEILNKYVGESEA 324 >6EF1-K nrPDB Length = 276 Score = 36.6 bits (83), Expect = 0.022, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 R +LL G P TGKT L A++ K F + GSE Sbjct: 55 RGVLLYGPPGTGKTMLVKAVANS--TKAAFIRVNGSE 89 >5VHP-E nrPDB Length = 262 Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 66 KAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 + + + LL G P TGKT LA A++ +L F +V S + + ++ L+ Sbjct: 34 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSIVDKYIGESARLIR 89 >5WVI-K nrPDB Length = 428 Score = 36.6 bits (83), Expect = 0.025, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 R +LL G P TGKT L A++ K F + GSE Sbjct: 207 RGVLLYGPPGTGKTMLVKAVANS--TKAAFIRVNGSE 241 >3JCO-J nrPDB Length = 405 Score = 36.6 bits (83), Expect = 0.025, Method: Composition-based stats. Identities = 22/105 (20%), Positives = 43/105 (40%), Gaps = 8/105 (7%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLR 132 + ++L G P TGKT LA A++ F + G+EL + + ++ R + + Sbjct: 183 KGVILYGPPGTGKTLLARAVAHH--TDCKFIRVSGAELVQKYIGEGSRMV----RELFVM 236 Query: 133 IKETKE--VYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 +E ++ E+ + E GG + ++ L G Sbjct: 237 AREHAPSIIFMDEIDSIGSTRVEGSGGGDSEVQRTMLELLNQLDG 281 >1FNN-A nrPDB Length = 389 Score = 36.6 bits (83), Expect = 0.025, Method: Composition-based stats. Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 10/86 (11%) Query: 369 IVRTLPYDKDEIRTIIERRATV--ERLQVESSALDLLATM-GTETSL-------RYALQL 418 ++R PY KD+I I+ RA L ++A + G +T L R A+ + Sbjct: 187 VIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDI 246 Query: 419 LAPCGILAQTSNRKEIVVNDVNEAKL 444 L AQ + RK I DV ++ Sbjct: 247 LYRSAYAAQQNGRKHIAPEDVRKSSK 272 >5KWA-A nrPDB Length = 497 Score = 36.6 bits (83), Expect = 0.026, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 19/106 (17%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVP-------------FCPLVGSELYSVEVKKTE 119 + +LL G P GKT +A A++ L K+ F + G EL + V +TE Sbjct: 182 KGVLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETE 241 Query: 120 TLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISH 165 + R I R +E EG + ++ ++ G +S Sbjct: 242 RHI----RLIFQRAREKAS--EGTPVIVFFDEMDSIFRTRGTGVSS 281 >5ZQM-A nrPDB Length = 309 Score = 36.2 bits (82), Expect = 0.029, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 + +L+ G P TGKT LA A++ E K F + S L S ++E L+ Sbjct: 63 KGVLMVGPPGTGKTLLAKAVATEC--KTTFFNVSSSTLTSKYRGESEKLVR 111 >3M6A-A nrPDB Length = 543 Score = 36.2 bits (82), Expect = 0.029, Method: Composition-based stats. Identities = 15/33 (45%), Positives = 21/33 (63%) Query: 67 AKKMSGRAILLAGGPSTGKTALALAISQELGPK 99 K + G + LAG P GKT+LA +I++ LG K Sbjct: 103 TKSLKGPILCLAGPPGVGKTSLAKSIAKSLGRK 135 >6HE9-H nrPDB Length = 390 Score = 36.2 bits (82), Expect = 0.031, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 + +LL G P TGKT LA A++ + + F +VGSE Sbjct: 168 KGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSE 202 >5EQT-A nrPDB Length = 257 Score = 36.2 bits (82), Expect = 0.031, Method: Composition-based stats. Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 6/104 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLM-ENFRRAIGL 131 + +LL G P GKT +A A++ E+ F +VGSEL + + L+ E F A Sbjct: 40 KGVLLYGPPGCGKTLMAKALAHEV--NATFIRVVGSELVRKYIGEGARLVHELFELA--- 94 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKG 175 + K ++ E+ + + + GG + ++ L G Sbjct: 95 KEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDG 138 >6HE4-H nrPDB Length = 267 Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSE 109 + +LL G P TGKT LA A++ + + F +VGSE Sbjct: 54 KGVLLYGPPGTGKTLLAKAVANQ--TRATFIRVVGSE 88 >6MSD-E nrPDB Length = 403 Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Query: 66 KAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLME 123 + + + LL G P TGKT LA A++ +L F +V S + + ++ L+ Sbjct: 175 RVGIIPPKGCLLYGPPGTGKTLLARAVASQL--DCNFLKVVSSSIVDKYIGESARLIR 230 >4LCB-A nrPDB Length = 367 Score = 36.2 bits (82), Expect = 0.033, Method: Composition-based stats. Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 9/93 (9%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET-LMENFRRAIGL 131 R ILL G P GKT LA A++ E+ F + + + S + + E + + F A Sbjct: 131 RGILLYGPPGNGKTMLAAAVANEI--DSYFIHVDAASIMSKWLGEAEKNVAKIFNTAREY 188 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTIS 164 K+ K + ++ + LG Y + Sbjct: 189 SKKDNKPAI------IFVDEIDALLGTYTSEVG 215 >3K1J-A nrPDB Length = 604 Score = 35.8 bits (81), Expect = 0.038, Method: Composition-based stats. Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 7/65 (10%) Query: 36 DESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQE 95 +E V +++ +GQ A V++IK R +LL G P TGK+ L A+++ Sbjct: 31 EEIEVPEKLIDQVIGQEHA-------VEVIKTAANQKRHVLLIGEPGTGKSMLGQAMAEL 83 Query: 96 LGPKV 100 L + Sbjct: 84 LPTET 88 Score = 28.9 bits (63), Expect = 5.4, Method: Composition-based stats. Identities = 34/201 (16%), Positives = 71/201 (35%), Gaps = 43/201 (21%) Query: 306 GVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTE---DVISPHGVPPD 362 GVLFIDE+ L +++ L A++ P+ + VR D + D Sbjct: 203 GVLFIDEIATLSLKMQQSLLTAMQEKKFPITGQSEMSSGAMVRTEPVPCDFVLVAAGNLD 262 Query: 363 LIDR---------------LLIVRTLPYDKDEIRTIIERRATV------------ERL-Q 394 +D+ + + T+P + R +++ A E + + Sbjct: 263 TVDKMHPALRSRIRGYGYEVYMRTTMPDTIENRRKLVQFVAQEVKRDGKIPHFTKEAVEE 322 Query: 395 VESSALDLLATMG-TETSLRYALQLLAPCGILAQTSNRKEIVVNDVNEAKLL-------- 445 + A G LR ++ G +A +K + DV EA + Sbjct: 323 IVREAQKRAGRKGHLTLRLRDLGGIVRAAGDIAVKKGKKYVEREDVIEAVKMAKPLEKQL 382 Query: 446 ---FLDAKRSTKILETSANYL 463 +++ K+ ++++T + + Sbjct: 383 ADWYIERKKEYQVIKTEGSEI 403 >5E7P-A nrPDB Length = 745 Score = 35.8 bits (81), Expect = 0.039, Method: Composition-based stats. Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 6/98 (6%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTE-TLMENFRRAIGL 131 R +LL G P GKT + A++ ++ + GSEL V +E + E F RA Sbjct: 520 RGVLLYGPPGCGKTFVVRALASS--GRLSVHAVKGSELMDKWVGSSEKAVRELFARA--- 574 Query: 132 RIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVG 169 R V+ E+ L P +N G + ++ Sbjct: 575 RDSAPSLVFLDEIDALAPRRGQNFDSGVTDKVVASLLT 612 >4NMN-A nrPDB Length = 434 Score = 35.8 bits (81), Expect = 0.045, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 4/62 (6%) Query: 62 VDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETL 121 +DL G I+LA P GKTA L+I L S ++S+E+ K + + Sbjct: 183 LDLKTTGFHPGDLIILAARPGMGKTAFMLSIIYNLAKDEG----KPSAVFSLEMSKEQLV 238 Query: 122 ME 123 M Sbjct: 239 MR 240 >5VHN-D nrPDB Length = 262 Score = 35.8 bits (81), Expect = 0.045, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 49 VGQIEAREACGVIVDLIKAKKMSG----RAILLAGGPSTGKTALALAISQELGPKVPFCP 104 + + E REA + + + K G R +L+ G P GKT LA A++ F Sbjct: 28 IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIR 85 Query: 105 LVGSE 109 +VGSE Sbjct: 86 VVGSE 90 >6B5D-A nrPDB Length = 309 Score = 35.4 bits (80), Expect = 0.048, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 23/36 (63%) Query: 60 VIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQE 95 ++ + + + +A++LAG P TGKT +A AI+ E Sbjct: 51 LVPEFFQGLRSPWKAMVLAGPPGTGKTLIARAIASE 86 >5WC0-A nrPDB Length = 472 Score = 35.4 bits (80), Expect = 0.051, Method: Composition-based stats. Identities = 13/23 (56%), Positives = 18/23 (78%) Query: 73 RAILLAGGPSTGKTALALAISQE 95 +A++LAG P TGKT +A AI+ E Sbjct: 227 KAMVLAGPPGTGKTLIARAIASE 249 >5VHO-F nrPDB Length = 267 Score = 35.4 bits (80), Expect = 0.055, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Query: 28 THIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSG------RAILLAGGP 81 + +K + +DE + + G + + +++ + +K + +L+ G P Sbjct: 5 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 64 Query: 82 STGKTALALAISQELGPKVPFCPLVGSEL 110 TGKT LA A + + K F L G +L Sbjct: 65 GTGKTLLARACAAQ--TKATFLKLAGPQL 91 >5VFP-F nrPDB Length = 396 Score = 35.4 bits (80), Expect = 0.058, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Query: 28 THIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSG------RAILLAGGP 81 + +K + +DE + + G + + +++ + +K + +L+ G P Sbjct: 127 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 186 Query: 82 STGKTALALAISQELGPKVPFCPLVGSEL 110 TGKT LA A + + K F L G +L Sbjct: 187 GTGKTLLARACAAQ--TKATFLKLAGPQL 213 >5T0C-AD nrPDB Length = 418 Score = 35.1 bits (79), Expect = 0.065, Method: Composition-based stats. Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 49 VGQIEAREACGVIVDLIKAKKMSG----RAILLAGGPSTGKTALALAISQELGPKVPFCP 104 + + E REA + + + K G R +L+ G P GKT LA A++ F Sbjct: 172 IQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHH--TTAAFIR 229 Query: 105 LVGSE 109 +VGSE Sbjct: 230 VVGSE 234 >2R6A-A nrPDB Length = 454 Score = 35.1 bits (79), Expect = 0.073, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 4/62 (6%) Query: 62 VDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETL 121 +D + + I++A PS GKTA AL I+Q + K ++S+E+ + + Sbjct: 193 LDRMTSGFQRSDLIIVAARPSVGKTAFALNIAQNVATKTN----ENVAIFSLEMSAQQLV 248 Query: 122 ME 123 M Sbjct: 249 MR 250 >6EPD-M nrPDB Length = 442 Score = 35.1 bits (79), Expect = 0.078, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 39/89 (43%), Gaps = 8/89 (8%) Query: 28 THIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSG------RAILLAGGP 81 + +K + +DE + + G + + +++ + +K + +L+ G P Sbjct: 173 SRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPP 232 Query: 82 STGKTALALAISQELGPKVPFCPLVGSEL 110 TGKT LA A + + K F L G +L Sbjct: 233 GTGKTLLARACAAQ--TKATFLKLAGPQL 259 >3D8B-A nrPDB Length = 357 Score = 34.7 bits (78), Expect = 0.081, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENF 125 + ILL G P TGKT + I+ + G F + S L S V + E ++ Sbjct: 118 KGILLFGPPGTGKTLIGKCIASQSGAT--FFSISASSLTSKWVGEGEKMVRAL 168 >6AMN-A nrPDB Length = 349 Score = 34.7 bits (78), Expect = 0.082, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 11/113 (9%) Query: 6 EVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVE-GGFVG-QIEAREACGVIVD 63 E++ N ++S + T ++ +D + A++ + +G + E R V+ Sbjct: 143 ELRGNTRIDSRGADTNTPL---EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVLAR 199 Query: 64 LIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVK 116 IK+ L G P GKTA+ ++Q + L G++L+S+++ Sbjct: 200 RIKSNP------CLIGEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 246 >5VY8-A nrPDB Length = 908 Score = 34.7 bits (78), Expect = 0.088, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 52/112 (46%), Gaps = 9/112 (8%) Query: 6 EVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVE-GGFVGQIEAREACGVIVDL 64 E++ N ++S + T ++ +D + A++ + +G+ E + ++ Sbjct: 146 ELRGNTRIDSRGADTNTPL---EYLSKYAIDMTEQARQGKLDPVIGREEEIRSTIRVL-- 200 Query: 65 IKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVK 116 A+++ L+ G P GKTA+ ++Q + L G++L+S+++ Sbjct: 201 --ARRIKSNPCLI-GEPGIGKTAIIEGVAQRIIDDDVPTILQGAKLFSLDLA 249 >6NYV-B nrPDB Length = 314 Score = 34.7 bits (78), Expect = 0.090, Method: Composition-based stats. Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 11/102 (10%) Query: 33 LGLDE--SGVAKRVEGGFVGQIEAREACG--VIVDLIKAKKMSG-----RAILLAGGPST 83 L LDE G AK GQ A++A VI+ ++ + +G + +LL G P Sbjct: 24 LILDEIVEGGAKVEWTDIAGQDVAKQALQEMVILPSVRPELFTGLRAPAKGLLLFGPPGN 83 Query: 84 GKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENF 125 GKT LA A++ E F + + L S V E L+ Sbjct: 84 GKTLLARAVATECSAT--FLNISAASLTSKYVGDGEKLVRAL 123 >3PFI-A nrPDB Length = 338 Score = 34.3 bits (77), Expect = 0.11, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%) Query: 37 ESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQEL 96 E+ + G++GQ ++ V + K + IL +G GKT LA IS E+ Sbjct: 20 ETSLRPSNFDGYIGQESIKKNLNVFIAAAKKRNECLDHILFSGPAGLGKTTLANIISYEM 79 Query: 97 GPKVPFCP 104 + Sbjct: 80 SANIKTTA 87 >4L16-A nrPDB Length = 334 Score = 34.3 bits (77), Expect = 0.12, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 35/85 (41%), Gaps = 8/85 (9%) Query: 46 GGFVGQIEAREACGVIVDLIKAKKMSG-----RAILLAGGPSTGKTALALAISQELGPKV 100 G G +A V++ + +G + +LL G P TGKT + ++ + K Sbjct: 59 AGLEGAKKALREI-VVLPFKRPDVFTGIRAPPKGVLLFGPPGTGKTMIGRCVASQC--KA 115 Query: 101 PFCPLVGSELYSVEVKKTETLMENF 125 F + S L S V + E L+ Sbjct: 116 TFFNISASSLTSKWVGEGEKLVRAL 140 >2CHG-A nrPDB Length = 226 Score = 34.3 bits (77), Expect = 0.13, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 75 ILLAGGPSTGKTALALAISQEL 96 +L +G P TGKTA A+A++++L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >5W0T-A nrPDB Length = 304 Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats. Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%) Query: 71 SGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + +LL G P GKT LA A+++E G F + S + Sbjct: 76 APSGVLLYGPPGCGKTMLAKALAKESGAN--FISIRMSSI 113 >3JCP-I nrPDB Length = 437 Score = 33.9 bits (76), Expect = 0.13, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 217 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSEL 252 >6FVU-I nrPDB Length = 384 Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 164 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSEL 199 >6G1K-A nrPDB Length = 921 Score = 33.9 bits (76), Expect = 0.14, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 4/106 (3%) Query: 182 DPTIYESIQRE--KVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHK 239 D E + E K D+ + + R A + D + V P+G + Sbjct: 723 DAKTEEGLTEENFKELKQDISSFRYEVIGMMKGNRKSTRANKSDTSASD-VSHPEGSLQY 781 Query: 240 KKEIVQDVTLHDLDVANA-RPQGGQDVISMMGQLLKPKKTEITEKL 284 + Q+ LH DV A + Q ++ + +G L +TE + Sbjct: 782 SSALKQNSKLHLYDVTTALQQQNSEEAKASLGCLANGSAVVLTEPI 827 >2CHV-A nrPDB Length = 319 Score = 33.9 bits (76), Expect = 0.16, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 18/22 (81%) Query: 75 ILLAGGPSTGKTALALAISQEL 96 +L +G P TGKTA A+A++++L Sbjct: 41 LLFSGPPGTGKTATAIALARDL 62 >5A5B-M nrPDB Length = 434 Score = 33.5 bits (75), Expect = 0.18, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 43/103 (41%), Gaps = 8/103 (7%) Query: 28 THIKGLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKM------SGRAILLAGGP 81 + +K + +DE + G + + +++ + +A K + + L+ G P Sbjct: 165 SRVKAMEVDEKPTETYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPP 224 Query: 82 STGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMEN 124 TGKT LA A + + F L +L + + + L+ + Sbjct: 225 GTGKTLLARACAAQ--TNATFLKLAAPQLVQMYIGEGAKLVRD 265 >6EF1-I nrPDB Length = 271 Score = 33.5 bits (75), Expect = 0.19, Method: Composition-based stats. Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSEL 110 + ++L G P TGKT LA A++ + F +VGSEL Sbjct: 51 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRIVGSEL 86 >1SXJ-D nrPDB Length = 353 Score = 33.5 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 49/247 (19%), Positives = 88/247 (35%), Gaps = 35/247 (14%) Query: 75 ILLAGGPSTGKTALALAISQEL-GPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRI 133 +L G P TGKT+ LA+++EL GP L+ S + + R I + Sbjct: 61 MLFYGPPGTGKTSTILALTKELYGPD-----LMKSRILELNASD--------ERGISIVR 107 Query: 134 KETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREK 193 ++ K V++ + D EN K I +A LR Y + R Sbjct: 108 EKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFC 167 Query: 194 VSIGDVIY-IEANTGAVKR-----VGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDV 247 + V I+ + + S+A + +E V G + + +I Sbjct: 168 LICNYVTRIIDPLASQCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGD 227 Query: 248 TLHDLDVANARPQG------GQDVISMMGQLLKPKKT-----EITEKLR----QEVNKVV 292 + + + +G G+++ S + L EI EK++ E+ K V Sbjct: 228 LRRGITLLQSASKGAQYLGDGKNITSTQVEELAGVVPHDILIEIVEKVKSGDFDEIKKYV 287 Query: 293 AKYIDQG 299 ++ G Sbjct: 288 NTFMKSG 294 >4I5O-A nrPDB Length = 363 Score = 33.5 bits (75), Expect = 0.22, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 12/66 (18%) Query: 48 FVGQIEAREACGVIV----DLIKAK------KMSGRAILLAGGPSTGKTALALAISQELG 97 +GQ +A++ V V ++ ++ ILL G +GKT LA +++ L Sbjct: 17 VIGQEQAKKVLAVAVYNHYKRLRNGDTSNGVELGKSNILLIGPTGSGKTLLAETLARLL- 75 Query: 98 PKVPFC 103 VPF Sbjct: 76 -DVPFT 80 >2W0M-A nrPDB Length = 235 Score = 33.1 bits (74), Expect = 0.26, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 78/214 (36%), Gaps = 20/214 (9%) Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALA-ISQELGPKVPFCPLVGSELYSVEVKKTETL 121 LI+ G I L G P TGKT +L I++ L P + E +++ + Sbjct: 14 KLIQGGIPQGFFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTEESRDSIIRQAKQF 73 Query: 122 MENFRRAIGLRI-------KETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAK 174 +F I ++ KE ++ + + LTPE+ N + + + + L Sbjct: 74 NWDFEEYIEKKLIIIDALMKEKED--QWSLVNLTPEELVNKVIEAKQKLGYGKARLVIDS 131 Query: 175 GTKTLRLDPTIYESIQR--EKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVP- 231 + P + I ++V I A + ++ + E + Sbjct: 132 VSALFLDKPAMARKISYYLKRVLNKWNFTIYATSQYAITTSQAFGFGVEHVADGIIRFRR 191 Query: 232 -LPKGEVH------KKKEIVQDVTLHDLDVANAR 258 + GE+H K ++ D + ++D+ N + Sbjct: 192 MIRNGELHRYILIEKMRQTDHDKHVWEIDIVNGK 225 >1IQP-A nrPDB Length = 327 Score = 33.1 bits (74), Expect = 0.27, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%) Query: 42 KRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQEL 96 + VGQ + + +K M +L AG P GKT ALA+++EL Sbjct: 21 PQRLDDIVGQEHIVKR---LKHYVKTGSMP--HLLFAGPPGVGKTTAALALAREL 70 >2JGR-A nrPDB Length = 299 Score = 33.1 bits (74), Expect = 0.29, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 17/177 (9%) Query: 45 EGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVP--- 101 E G + G ++ + G A ++AGG ++ A+ Q G +P Sbjct: 30 EEGMTIHVRVTWEKGDAARYVEEARKFGVATVIAGGGDGTINEVSTALIQCEGDDIPALG 89 Query: 102 FCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGK 161 PL + ++ V E L + + AI + GG+G Sbjct: 90 ILPLGTANDFATSVGIPEALDKALKLAIA----GDAIAIDMAQVNKQTCFINMATGGFGT 145 Query: 162 TISHVIV-GLKSAKGTKTLRLDPTI-YESIQREKVSI--------GDVIYIEANTGA 208 I+ LK+A G+ + + + +++Q ++ I GD + I G Sbjct: 146 RITTETPEKLKAALGSVSYIIHGLMRMDTLQPDRCEIRGENFHWQGDALVIGIGNGR 202 >1TAF-A nrPDB Length = 68 Score = 32.7 bits (73), Expect = 0.37, Method: Composition-based stats. Identities = 15/72 (20%), Positives = 30/72 (41%), Gaps = 4/72 (5%) Query: 377 KDEIRTIIERRATVERLQVESSALDLLATMGTETSLRYALQLLAPCGILAQTSNRKEIVV 436 + + I+ + + E ++ L E + RY +L + A + +K I + Sbjct: 1 PKDAQVIMSILKELNVQEYEPRVVNQL----LEFTFRYVTSILDDAKVYANHARKKTIDL 56 Query: 437 NDVNEAKLLFLD 448 +DV A + LD Sbjct: 57 DDVRLATEVTLD 68 >3W34-A nrPDB Length = 211 Score = 32.4 bits (72), Expect = 0.39, Method: Composition-based stats. Identities = 13/29 (44%), Positives = 21/29 (72%) Query: 77 LAGGPSTGKTALALAISQELGPKVPFCPL 105 +AGG ++GKT LA A+++ LG +V P+ Sbjct: 11 IAGGTASGKTTLAQALARTLGERVALLPM 39 >2R82-A nrPDB Length = 874 Score = 32.4 bits (72), Expect = 0.41, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 89 ALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELT 148 AL + +G +P P + + + E R I +R++ + E EG Sbjct: 385 ALKAGEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEG 444 Query: 149 PEDAENPLGGYGKTISHVIVG--------LKSAKGTKTLRLDPTIYESIQREKVSIGDVI 200 + + ++ + +K + KT L + GD I Sbjct: 445 ILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAE--------GDYI 496 Query: 201 YIEANTGAVKR 211 ++ +TG + + Sbjct: 497 SLDGSTGKIYK 507 >3PVS-A nrPDB Length = 447 Score = 32.0 bits (71), Expect = 0.54, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%) Query: 48 FVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKV 100 ++GQ A + I+A + +++L G P TGKT LA I++ V Sbjct: 28 YIGQQHLLAAGKPLPRAIEAGHL--HSMILWGPPGTGKTTLAEVIARYANADV 78 >3CM0-A nrPDB Length = 186 Score = 32.0 bits (71), Expect = 0.57, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 72 GRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFR 126 G+A++ G P GK A ++QELG F L ++ V + L E R Sbjct: 4 GQAVIFLGPPGAGKGTQASRLAQELG----FKKLSTGDILRDHVARGTPLGERVR 54 >6ED3-A nrPDB Length = 848 Score = 31.6 bits (70), Expect = 0.75, Method: Composition-based stats. Identities = 35/228 (15%), Positives = 79/228 (34%), Gaps = 27/228 (11%) Query: 76 LLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKE 135 +L G P GKTA+ ++Q +V ++ KT ++ G + + Sbjct: 203 VLIGEPGVGKTAIVEGLAQR---------IVAGDVPESLRDKTIVALDLGSMVAGSKYRG 253 Query: 136 TKEVYEGEVTELTPEDAENPLGGYGKTISHV-IVGLKSAKGTKTLRLDPTIYESIQREKV 194 E E + +D +N G I + + A G + I + R ++ Sbjct: 254 EFE----ERLKAVLDDIKNSAGQIITFIDELHTIVGAGATGEGAMDAGNMIKPMLARGEL 309 Query: 195 SIGDVIYIEANTGAVKR---VGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHD 251 + ++ +++ + R + E+ + + +G + + E+ V + D Sbjct: 310 RLVGATTLDEYRKHIEKDAALERRFQQVYVGEPSVEDTIGILRG-LKDRYEVHHGVRITD 368 Query: 252 LDVANARPQGGQDVISMMGQLLKPKKT-----EITEKLRQEVNKVVAK 294 + A + + + P K E +LR E++ + Sbjct: 369 SALVAAATLSDRYITARFL----PDKAIDLVDEAASRLRMEIDSRPVE 412 >1R6B-X nrPDB Length = 758 Score = 31.2 bits (69), Expect = 0.91, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 6/53 (11%) Query: 50 GQIEAREACGVIVDLIKAK-----KMSGRAILLAGGPSTGKTALALAISQELG 97 GQ +A EA + + +A K G + L AG GKT + + +S+ LG Sbjct: 462 GQDKAIEALTEAIKMARAGLGHEHKPVG-SFLFAGPTGVGKTEVTVQLSKALG 513 >6EM8-A nrPDB Length = 818 Score = 31.2 bits (69), Expect = 1.0, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 6/88 (6%) Query: 76 LLAGGPSTGKTALALAISQEL-GPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIK 134 +L G P GKTA+A ++Q + +VP L + S+++ + +R R+K Sbjct: 205 VLIGEPGVGKTAIAEGLAQAIVNNEVPET-LKDKRVMSLDMGTVVAGTK-YRGEFEERLK 262 Query: 135 ETKEVYE--GEVTELTPEDAENPLGGYG 160 + E + G V L ++ +G G Sbjct: 263 KVMEEIQQAGNVI-LFIDELHTLVGAGG 289 >2FM4-A nrPDB Length = 128 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 44/131 (33%), Gaps = 16/131 (12%) Query: 89 ALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELT 148 AL + +G +P P + + + E R I +R++ + E EG Sbjct: 2 ALKAGEVIGSALPASPGAAAGKVYFTADEAKAAHEKGERVILVRLETSPEDIEGMHAAEG 61 Query: 149 PEDAENPLGGYGKTISHVIVG--------LKSAKGTKTLRLDPTIYESIQREKVSIGDVI 200 + + ++ + +K + KT L + GD I Sbjct: 62 ILTVRGGMTSHAAVVARGMGTCCVSGCGEIKINEEAKTFELGGHTFAE--------GDYI 113 Query: 201 YIEANTGAVKR 211 ++ +TG + + Sbjct: 114 SLDGSTGKIYK 124 >6EF0-M nrPDB Length = 258 Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 16/72 (22%), Positives = 32/72 (44%), Gaps = 8/72 (11%) Query: 59 GVIVDLIKAKKM------SGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYS 112 +++ + +A K + + L+ G P TGKT LA A + + F L +L Sbjct: 21 AIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQ--TNATFLKLAAPQLVQ 78 Query: 113 VEVKKTETLMEN 124 + + + L+ + Sbjct: 79 MYIGEGAKLVRD 90 >5W36-A nrPDB Length = 325 Score = 30.8 bits (68), Expect = 1.2, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 6/74 (8%) Query: 202 IEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARP-- 259 I + G V VG + D +YV P+ ++KK ++ + L D+A Sbjct: 101 IRTSAGEV--VGFGARRLFDDDAMEAKYVNTPETLLYKKSSVMFGIDLAKRDIAKGHQAV 158 Query: 260 --QGGQDVISMMGQ 271 +G DV++M Sbjct: 159 VVEGYTDVMAMHLA 172 >2GZA-A nrPDB Length = 361 Score = 30.4 bits (67), Expect = 1.5, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 4/52 (7%) Query: 51 QIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPF 102 ++ A + G + ++ R I++AG +GKT L A+ QE +PF Sbjct: 154 ELLALKEAGDYMSFLRRAVQLERVIVVAGETGSGKTTLMKALMQE----IPF 201 >5D4W-A nrPDB Length = 926 Score = 30.4 bits (67), Expect = 1.7, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 61/145 (42%), Gaps = 15/145 (10%) Query: 3 AISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGVIV 62 AI ++ N V+S N+ + ++ +D + +A+ G + + RE V Sbjct: 154 AIQAIRGNKRVDSRNADTEQE---NENLSKFCIDMTAMAR---EGKIDPVIGREEEIRRV 207 Query: 63 DLIKAKKMSGRAILLAGGPSTGKTALALAISQEL-GPKVPFCPLVGSELYSVEV------ 115 I +++ +L+ G P GKT + ++Q + VP L +L S++V Sbjct: 208 IRILSRRTKNNPVLI-GEPGVGKTTIVEGLAQRIVNADVP-DNLAACKLLSLDVGALVAG 265 Query: 116 KKTETLMENFRRAIGLRIKETKEVY 140 K E + + I+E+KE Sbjct: 266 SKYRGEFEERMKGVLKEIQESKETI 290 >6EMW-E nrPDB Length = 181 Score = 30.4 bits (67), Expect = 1.8, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 37/87 (42%), Gaps = 4/87 (4%) Query: 76 LLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKE 135 +L G P GKTA+A ++Q + L + S+++ + +R R+K+ Sbjct: 44 VLIGEPGVGKTAIAEGLAQAIVNNEVPETLKDKRVMSLDMGTVVAGTK-YRGEFEERLKK 102 Query: 136 TKEVYE--GEVTELTPEDAENPLGGYG 160 E + G V L ++ +G G Sbjct: 103 VMEEIQQAGNVI-LFIDELHTLVGAGG 128 >1SXJ-C nrPDB Length = 340 Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 2/41 (4%) Query: 56 EACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQEL 96 E + + K+ +L G P TGKT+ +A+++E+ Sbjct: 32 EVITTVRKFVDEGKLP--HLLFYGPPGTGKTSTIVALAREI 70 >1P4S-A nrPDB Length = 181 Score = 30.0 bits (66), Expect = 2.1, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 10/87 (11%) Query: 75 ILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIK 134 +LL G P GK A+ ++++LG +P + EL+ +++ L +R + Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLG--IP--QISTGELFRRNIEEGTKLGVEAKRYL----- 53 Query: 135 ETKEVYEGEVT-ELTPEDAENPLGGYG 160 + ++ ++T EL + NP G Sbjct: 54 DAGDLVPSDLTNELVDDRLNNPDAANG 80 >5GKO-A nrPDB Length = 671 Score = 30.0 bits (66), Expect = 2.5, Method: Composition-based stats. Identities = 41/220 (18%), Positives = 74/220 (33%), Gaps = 7/220 (3%) Query: 46 GGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPL 105 V + A E+ I+ I G + + G +GK+ L + P + Sbjct: 17 SNLVREFPAGESTIQILKGIDLTIYEGELVAIVGQSGSGKSTLMNILGCLDRPTSGSYKV 76 Query: 106 VGSELYSVEVKKTETLMENFRRAIGLRIKETKEV-YEGEVTELTPEDAENPLGGYGKTIS 164 G E +E + L + I R ++ EG V P + + Sbjct: 77 NGQETGKLEPDQLAQLRREYFGFIFQRYHLLGDLSAEGNVEVPAVYAGVTPADRKQRATA 136 Query: 165 HVI---VGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAV-KRVGRSDAYA- 219 + +G K+ L SI R ++ GDVI + TGA+ G Sbjct: 137 LLTELGLGTKTQNRPSQLSGGQQQRVSIARALMNGGDVILADEPTGALDSHSGVEVMRIL 196 Query: 220 TEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARP 259 E + + L ++ K + + + D ++ + RP Sbjct: 197 RELNAAGHTII-LVTHDMQVAKNATRIIEISDGEIISDRP 235 >1Y63-A nrPDB Length = 184 Score = 29.7 bits (65), Expect = 2.6, Method: Composition-based stats. Identities = 13/25 (52%), Positives = 17/25 (68%) Query: 72 GRAILLAGGPSTGKTALALAISQEL 96 G IL+ G P TGKT++A I+ EL Sbjct: 10 GINILITGTPGTGKTSMAEMIAAEL 34 >1QVR-A nrPDB Length = 854 Score = 29.7 bits (65), Expect = 2.6, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 18/115 (15%) Query: 7 VKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGG----FVGQ-IEAREACGVI 61 +KE G + + + + ++ G+D + + G +G+ E R ++ Sbjct: 132 LKELRGGRTVQTEHAE--STYNALEQYGID---LTRLAAEGKLDPVIGRDEEIRRVIQIL 186 Query: 62 VDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGP-KVPFCPLVGSELYSVEV 115 + K + L G P GKTA+ ++Q + VP L G + S+++ Sbjct: 187 LRRTKNNPV------LIGEPGVGKTAIVEGLAQRIVKGDVP-EGLKGKRIVSLQM 234 >3Q8X-B nrPDB Length = 287 Score = 29.7 bits (65), Expect = 2.9, Method: Composition-based stats. Identities = 46/234 (19%), Positives = 90/234 (38%), Gaps = 23/234 (9%) Query: 63 DLIKAKKM--SGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 +LI+ KK S A LL G P +GKT+L AI +E V ++ ++ + + + Sbjct: 22 ELIQGKKAVESPTAFLLGGQPGSGKTSLRSAIFEETQGNV---IVIDNDTFKQQHPNFDE 78 Query: 121 LMENFRRAIGLRIKETKEVYEGEVTELTPEDAEN-PLGGYGKTISHVIVGLKSAKGTKTL 179 L++ + + + + + + N + G G+T V +++A + Sbjct: 79 LVKLYEKDVVKHVTPYSNRMTEAIISRLSDQGYNLVIEGTGRTTD---VPIQTATMLQAK 135 Query: 180 RLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLPKGEVHK 239 + +Y V V I + G ++R A D T P ++ Sbjct: 136 GYETKMY-------VMA--VPKINSYLGTIERYETMYAD----DPMTARATPKQAHDIVV 182 Query: 240 KKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVA 293 K TLH + + ++ + + L P + E L +E+N+ V+ Sbjct: 183 KNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETPSISP-KETLEKELNRKVS 235 >3H0K-A nrPDB Length = 178 Score = 29.7 bits (65), Expect = 3.2, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%) Query: 73 RAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRR 127 + IL+ G P +GK+ A + +E G KV V + YS+E K E LM+ +R Sbjct: 1 KVILITGMPGSGKSEFA-KLLKERGAKVIVMSDVVRKRYSIEAKPGERLMDFAKR 54 >5Y1Z-C nrPDB Length = 324 Score = 29.7 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 19/36 (52%) Query: 96 LGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGL 131 + ++PF +++ +++ E +EN RR G+ Sbjct: 242 MSKEIPFSVKKTKSIFNSAMQEMEVYVENIRRKFGV 277 >1VBH-A nrPDB Length = 876 Score = 29.7 bits (65), Expect = 3.3, Method: Composition-based stats. Identities = 44/273 (16%), Positives = 90/273 (32%), Gaps = 31/273 (11%) Query: 50 GQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTAL-------ALAISQELGPKVPF 102 G+ + A + VD++ + R+ + P L + Q + +P Sbjct: 342 GKRTGKSAVKIAVDMVNEGLVEPRSAIKMVEPGHLDQLLHPQFENPSAYKDQVIATGLPA 401 Query: 103 CP--LVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLG--- 157 P VG +++ E E + AI +R + + E G + + Sbjct: 402 SPGAAVGQVVFTAE--DAEAWHSQGKAAILVRAETSPEDVGGMHAAVGILTERGGMTSHA 459 Query: 158 -----GYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAVKRV 212 G+GK G++ K + + + G+ + + +TG V + Sbjct: 460 AVVARGWGKCCVSGCSGIRVNDAEKLVTIGGHVLRE--------GEWLSLNGSTGEVI-L 510 Query: 213 GRSDAYATEFDLETEEYVPLPKGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQL 272 G+ + ++ +V K K + T D AR G Q + + Sbjct: 511 GKQPLSPPALSGDLGTFMAWVD-DVRKLKVLANADTPD--DALTARNNGAQGIGLCRTEH 567 Query: 273 LKPKKTEITEKLRQEVNKVVAKYIDQGVAELIP 305 + E + +RQ + + Q + L+P Sbjct: 568 MFFASDERIKAVRQMIMAPTLELRQQALDRLLP 600 >5LKM-A nrPDB Length = 452 Score = 29.3 bits (64), Expect = 3.5, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 47/140 (33%), Gaps = 11/140 (7%) Query: 68 KKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTETLMENFRR 127 + G +L+ G P GK+ L L +S +L + G E + ++K + + Sbjct: 84 GVVPGSLVLIGGDPGIGKSTLLLQVSTQLSQVGTVLYVSGEE-SAQQIKLRAERLGDIDS 142 Query: 128 AIGLRIKETKEVYEGEVTELTPE----------DAENPLGGYGKTISHVIVGLKSAKGTK 177 L + + EV + P+ + G G V + + K Sbjct: 143 EFYLYAETNMQSVRAEVERIQPDFLIIDSIQTIMSPEISGVQGSVSQVREVTAELMQLAK 202 Query: 178 TLRLDPTIYESIQREKVSIG 197 T + I + +E G Sbjct: 203 TNNIAIFIVGHVTKEGTLAG 222 >2Q6T-A nrPDB Length = 444 Score = 29.3 bits (64), Expect = 3.9, Method: Composition-based stats. Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%) Query: 72 GRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEV 115 G ++A P+ GKTA AL I+Q K VG +YS+E+ Sbjct: 200 GSLNIIAARPAMGKTAFALTIAQNAALKEG----VGVGIYSLEM 239 >3CRQ-A nrPDB Length = 323 Score = 28.9 bits (63), Expect = 4.4, Method: Composition-based stats. Identities = 11/23 (47%), Positives = 15/23 (65%) Query: 74 AILLAGGPSTGKTALALAISQEL 96 AI L G + GKT LA+A++ L Sbjct: 7 AIFLMGPTAAGKTDLAMALADAL 29 >5K6H-F nrPDB Length = 445 Score = 28.9 bits (63), Expect = 4.9, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 26/70 (37%) Query: 133 IKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSAKGTKTLRLDPTIYESIQRE 192 IK+ + Y+ VTEL P G G I + K + + S + Sbjct: 54 IKQELDKYKNAVTELQLLMQSTPATGSGSAICSGVAVCKVLHLEGEVNKIKSALLSTNKA 113 Query: 193 KVSIGDVIYI 202 VS+ + + + Sbjct: 114 VVSLSNGVSV 123 >4YPL-A nrPDB Length = 555 Score = 28.9 bits (63), Expect = 5.1, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 16/25 (64%) Query: 75 ILLAGGPSTGKTALALAISQELGPK 99 ++L G P GKT+L +I++ + K Sbjct: 113 LVLVGPPGVGKTSLGRSIARSMNRK 137 >4YPN-A nrPDB Length = 293 Score = 28.9 bits (63), Expect = 5.2, Method: Composition-based stats. Identities = 9/25 (36%), Positives = 16/25 (64%) Query: 75 ILLAGGPSTGKTALALAISQELGPK 99 ++L G P GKT+L +I++ + K Sbjct: 146 LVLVGPPGVGKTSLGRSIARSMNRK 170 >5L3R-A nrPDB Length = 301 Score = 28.5 bits (62), Expect = 6.3, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 32/80 (40%), Gaps = 1/80 (1%) Query: 32 GLGLDESGVAKRVEGGFVGQIEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALA 91 G+G+ + V + G + +L + K ILLAG GKT + Sbjct: 67 GMGVIRGVKPDQQLVKIVHDELVKLMGGEVSEL-QFAKSGPTVILLAGLQGVGKTTVCAK 125 Query: 92 ISQELGPKVPFCPLVGSELY 111 ++ L + C L+ ++Y Sbjct: 126 LACYLKKQGKSCMLIAGDVY 145 >3J3U-A nrPDB Length = 810 Score = 28.5 bits (62), Expect = 6.4, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 76 LLAGGPSTGKTALALAISQEL 96 +L G P GKTA+A ++Q++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQQI 225 >1XP8-A nrPDB Length = 366 Score = 28.5 bits (62), Expect = 7.0, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 18/135 (13%) Query: 1 MVAISEVKENPGVNSSNSGAVTRTAAHTHIKGLGLDESGVAKRVEGGFVGQIEAREACGV 60 + A ++ KE + + + I LG + + V G + A G+ Sbjct: 12 ISAPTDAKERSKAIETAMSQIEKAFGKGSIMKLGAESKLDVQVVSTGSLSLDLALGVGGI 71 Query: 61 IVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSVEVKKTET 120 GR + G S GKT LALAI + C + +E Sbjct: 72 P---------RGRITEIYGPESGGKTTLALAIVAQAQKAGGTCAFIDAE---------HA 113 Query: 121 LMENFRRAIGLRIKE 135 L + RA+G+ E Sbjct: 114 LDPVYARALGVNTDE 128 >5W68-A nrPDB Length = 387 Score = 28.5 bits (62), Expect = 7.1, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 96 LGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENP 155 +G VP L GS + S + R+ +G+ +K T ++ EG ++ E + Sbjct: 211 VGQDVPV--LTGSTVGS---NNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSK 265 Query: 156 LGGY 159 + G Sbjct: 266 VEGQ 269 >3PXI-A nrPDB Length = 758 Score = 28.5 bits (62), Expect = 7.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 76 LLAGGPSTGKTALALAISQEL 96 +L G P GKTA+A ++Q++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQQI 225 >3PXG-A nrPDB Length = 468 Score = 28.1 bits (61), Expect = 7.3, Method: Composition-based stats. Identities = 9/21 (42%), Positives = 15/21 (71%) Query: 76 LLAGGPSTGKTALALAISQEL 96 +L G P GKTA+A ++Q++ Sbjct: 205 VLIGEPGVGKTAIAEGLAQQI 225 >3ICE-A nrPDB Length = 422 Score = 28.1 bits (61), Expect = 7.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 16/34 (47%) Query: 72 GRAILLAGGPSTGKTALALAISQELGPKVPFCPL 105 G+ L+ P GKT L I+Q + P C L Sbjct: 174 GQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVL 207 >5ZDH-A nrPDB Length = 646 Score = 28.1 bits (61), Expect = 7.9, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 5/64 (7%) Query: 96 LGPKVPFCPLVGSELYSVEVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENP 155 +G VP L GS + S + R+ +G+ +K T ++ EG ++ E + Sbjct: 452 VGQDVPV--LTGSTVGS---NNSNPFNTVERKKVGIMLKVTPQINEGNAVQMVIEQEVSK 506 Query: 156 LGGY 159 + G Sbjct: 507 VEGQ 510 >4HSE-A nrPDB Length = 397 Score = 27.7 bits (60), Expect = 9.6, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 8/65 (12%) Query: 52 IEAREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGP-KVPFCPLVGSEL 110 E R +++ K + L G P GKTA+ ++Q + VP L G + Sbjct: 40 EEIRRVIQILLRRTKNNPV------LIGEPGVGKTAIVEGLAQRIVKGDVP-EGLKGKRI 92 Query: 111 YSVEV 115 S+++ Sbjct: 93 VSLQM 97 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.132 0.336 Lambda K H 0.267 0.0400 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,433,321 Number of Sequences: 36641 Number of extensions: 599608 Number of successful extensions: 2110 Number of sequences better than 10.0: 169 Number of HSP's better than 10.0 without gapping: 176 Number of HSP's successfully gapped in prelim test: 94 Number of HSP's that attempted gapping in prelim test: 1836 Number of HSP's gapped (non-prelim): 328 length of query: 463 length of database: 10,336,785 effective HSP length: 100 effective length of query: 363 effective length of database: 6,672,685 effective search space: 2422184655 effective search space used: 2422184655 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.6 bits) S2: 61 (28.1 bits)