BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q03456 (134 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1MZB-A nrPDB 271 6e-74 2W57-A nrPDB 160 2e-40 5NBC-A nrPDB 120 2e-28 5L0P-A nrPDB 111 7e-26 2FU4-A nrPDB 111 8e-26 5FD5-A nrPDB 97 2e-21 4RAY-A nrPDB 94 2e-20 6D57-A nrPDB 92 9e-20 2XIG-A nrPDB 79 8e-16 2O03-A nrPDB 75 9e-15 3F8N-A nrPDB 60 2e-10 3MWM-A nrPDB 53 3e-08 3EYY-A nrPDB 53 5e-08 6DK4-A nrPDB 51 2e-07 5NL9-A nrPDB 46 4e-06 4LMY-A nrPDB 43 5e-05 6ILH-A nrPDB 31 0.17 5UNK-A nrPDB 30 0.34 2KLB-A nrPDB 28 1.3 6CHD-A nrPDB 28 1.4 4YUX-A nrPDB 28 1.6 4IZO-A nrPDB 27 2.2 5C0W-L nrPDB 27 2.6 1L8K-A nrPDB 26 4.5 1YRH-A nrPDB 26 4.9 5NIK-J nrPDB 25 7.2 4V19-Y nrPDB 25 7.4 5OOL-V nrPDB 25 9.9 >1MZB-A nrPDB Length = 136 Score = 271 bits (693), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 134/134 (100%), Positives = 134/134 (100%) Query: 1 MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQ 60 MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQ Sbjct: 3 MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQ 62 Query: 61 FEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE 120 FEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE Sbjct: 63 FEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE 122 Query: 121 LVDHNLVLYVRKKK 134 LVDHNLVLYVRKKK Sbjct: 123 LVDHNLVLYVRKKK 136 >2W57-A nrPDB Length = 150 Score = 160 bits (404), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 74/126 (58%), Positives = 99/126 (78%) Query: 4 NSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEA 63 N L+ AGLKVTLPR+KIL++L E +H+SAE++YK L++ GE++GLATVYRVL QF+ Sbjct: 5 NQALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDD 64 Query: 64 AGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVD 123 AG+V RH+F+GG +VFEL+ HHDH+VC+D GEVIEF D IE+RQKEI + +L + Sbjct: 65 AGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTN 124 Query: 124 HNLVLY 129 H+L LY Sbjct: 125 HSLYLY 130 >5NBC-A nrPDB Length = 140 Score = 120 bits (301), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 55/131 (41%), Positives = 84/131 (64%) Query: 3 ENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFE 62 +N +L++ G KVT PRV+IL++ + + +H+S +DV+ L G G+ATVYRVL QFE Sbjct: 4 KNLDLKEFGFKVTQPRVEILKLFEKNKDKHLSPDDVFSKLKAQGSTTGIATVYRVLNQFE 63 Query: 63 AAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELV 122 +AG++ R D ++EL HHDH++CV + EF IE QK+IV G E++ Sbjct: 64 SAGIINRLKLDNEQVMYELNQGEHHDHIICVKCNMIQEFYSPGIEALQKQIVESFGAEMI 123 Query: 123 DHNLVLYVRKK 133 D++L +YV+ K Sbjct: 124 DYSLNIYVKCK 134 >5L0P-A nrPDB Length = 353 Score = 111 bits (278), Expect = 7e-26, Method: Compositional matrix adjust. Identities = 50/79 (63%), Positives = 66/79 (83%) Query: 4 NSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEA 63 N+ L+KAGLKVTLPR+KIL++L + H+SAED+YK L++ GE++GLATVYRVL QF+ Sbjct: 273 NTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDD 332 Query: 64 AGLVVRHNFDGGHAVFELA 82 AG+V RHNF+GG +VFEL Sbjct: 333 AGIVTRHNFEGGKSVFELT 351 >2FU4-A nrPDB Length = 83 Score = 111 bits (278), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 50/79 (63%), Positives = 66/79 (83%) Query: 4 NSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEA 63 N+ L+KAGLKVTLPR+KIL++L + H+SAED+YK L++ GE++GLATVYRVL QF+ Sbjct: 5 NTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDD 64 Query: 64 AGLVVRHNFDGGHAVFELA 82 AG+V RHNF+GG +VFEL Sbjct: 65 AGIVTRHNFEGGKSVFELT 83 >5FD5-A nrPDB Length = 141 Score = 96.7 bits (239), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 48/119 (40%), Positives = 73/119 (61%), Gaps = 1/119 (0%) Query: 11 GLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRH 70 G+++T R I ++L+ +E H E++Y+ ++ + ++TVYR + FE AG++ RH Sbjct: 15 GMRMTEQRRVIARILEDSED-HPDVEELYRRSVKVDAKISISTVYRTVKLFEDAGIIARH 73 Query: 71 NFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLY 129 +F G + +E HHDH++ + TG VIEF EIE Q+ I RE GF LVDH L LY Sbjct: 74 DFRDGRSRYETVPEEHHDHLIDLKTGTVIEFRSPEIEALQERIAREHGFRLVDHRLELY 132 >4RAY-A nrPDB Length = 145 Score = 93.6 bits (231), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 53/120 (44%), Positives = 72/120 (60%), Gaps = 3/120 (2%) Query: 11 GLKVTLPRVKILQML-DSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVR 69 G+K+T R I Q+L DSA+ H E+VY+ + +ATVYR + FE ++ R Sbjct: 15 GMKMTDQRRVIAQVLSDSAD--HPDVEEVYRRATAKDPRISIATVYRTVRLFEEESILER 72 Query: 70 HNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLY 129 H+F G A +E A S HHDH++ V++ VIEF EIE Q+EI R+ GF LV H L LY Sbjct: 73 HDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFRLVGHRLELY 132 >6D57-A nrPDB Length = 161 Score = 91.7 bits (226), Expect = 9e-20, Method: Compositional matrix adjust. Identities = 50/125 (40%), Positives = 74/125 (59%), Gaps = 3/125 (2%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGED--VGLATVYRVLTQFEAA 64 LR+ GLK T R +L+ L ++ H + E +Y + +A D VG+ATVYR L E A Sbjct: 23 LRQGGLKYTKQREVLLKTLYHSDT-HYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEA 81 Query: 65 GLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDH 124 +V +F +ELA+ HHDHM+C + G++IEF + IE++Q I +E GF+L H Sbjct: 82 EMVTSISFGSAGKKYELANKPHHDHMICKNCGKIIEFENPIIERQQALIAKEHGFKLTGH 141 Query: 125 NLVLY 129 + LY Sbjct: 142 LMQLY 146 >2XIG-A nrPDB Length = 150 Score = 78.6 bits (192), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 36/124 (29%), Positives = 73/124 (58%), Gaps = 1/124 (0%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 ++K GLK + R +++ +L + H+S E++ ++ + ++ +++VYR+L E Sbjct: 18 IKKNGLKNSKQREEVVSVLYRS-GTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENF 76 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNL 126 + +E+A HHDH++C+ G++IEF D EIE RQ E+V++ +L+ H++ Sbjct: 77 ISVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHDM 136 Query: 127 VLYV 130 ++V Sbjct: 137 KMFV 140 >2O03-A nrPDB Length = 131 Score = 75.1 bits (183), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 40/120 (33%), Positives = 64/120 (53%), Gaps = 1/120 (0%) Query: 10 AGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVR 69 AG++ T R I +L++ + SA++++ L GE++GL TVYR L ++GLV Sbjct: 5 AGVRSTRQRAAISTLLETLDD-FRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDT 63 Query: 70 HNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLY 129 + D G +V+ HH H+VC G IE D E+E E+ + GF V H + ++ Sbjct: 64 LHTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIF 123 >3F8N-A nrPDB Length = 145 Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust. Identities = 35/123 (28%), Positives = 68/123 (55%), Gaps = 2/123 (1%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 L++ G+++T R IL+ L ++ H +A+D+YKAL ++ +ATVY L F +GL Sbjct: 13 LKETGVRITPQRHAILEYLVNS-MAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGL 71 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNL 126 V + + F+ S H+ H +C + G++++F +++ ++ GF++ H L Sbjct: 72 VKELTYGDASSRFDFVTSDHY-HAICENCGKIVDFHYPGLDEVEQLAAHVTGFKVSHHRL 130 Query: 127 VLY 129 +Y Sbjct: 131 EIY 133 >3MWM-A nrPDB Length = 139 Score = 53.1 bits (126), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 36/118 (30%), Positives = 56/118 (47%), Gaps = 2/118 (1%) Query: 13 KVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNF 72 + T R + L E+ SA++++ L G+ VGL TVYR L AG V Sbjct: 11 RATRQRAAVSAALQEVEE-FRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRT 69 Query: 73 DGGHAVFELADSG-HHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLY 129 G +V+ +G HH H+VC G+ +E +EK + I E G+ V H + ++ Sbjct: 70 AEGESVYRRCSTGDHHHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIF 127 >3EYY-A nrPDB Length = 145 Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust. Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 2/96 (2%) Query: 5 SELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAA 64 S+LR+ G ++T R +L+ +D+ E H + +D+ + + + ++TVYR L E Sbjct: 8 SDLRQRGYRLTPQRQLVLEAVDTLE--HATPDDILGEVRKTASGINISTVYRTLELLEEL 65 Query: 65 GLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIE 100 GLV + G + LAD HH H+VC D VIE Sbjct: 66 GLVSHAHLGHGAPTYHLADRHHHIHLVCRDCTNVIE 101 >6DK4-A nrPDB Length = 142 Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 6/120 (5%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 L+K LK T R+ +L++L E H + +++Y + + + LATVY+ L + GL Sbjct: 7 LKKHELKATPQRLCVLKILKRHE--HPNIDELYIEIKKEYPSISLATVYKNLNTLQEQGL 64 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTG--EVIEFMDAEIEKRQKEIVRERGFELVDH 124 VV N +++ + H H+VC G E + F DA++ + Q+ + ++ G LV+H Sbjct: 65 VVEINVLNQKTCYDIYEE-EHIHVVCTKCGGIEDLSFKDAKLYEYQEHLEKKIG-NLVNH 122 >5NL9-A nrPDB Length = 151 Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 72/134 (53%), Gaps = 8/134 (5%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 L AG+ VT+ R+++ +L S Q H++A+ V++ + E + AT++ L F G+ Sbjct: 18 LEDAGINVTVQRLQMANLLLSKPQ-HLTADQVFQLINEHMPNASRATIFNNLKLFAEKGI 76 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEF-MDAEIEKR-----QKEIVRERGFE 120 V G +++ ++ HH H + TGE+ + +D++++++ +++ + G Sbjct: 77 VNLLELKSGITLYD-SNVIHHHHAIDEKTGEIYDISLDSKLQEKVLSELKQDFKLKTGSS 135 Query: 121 LVDHNLVLYVRKKK 134 L + NL + ++ KK Sbjct: 136 LENCNLSITLKGKK 149 >4LMY-A nrPDB Length = 163 Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 3/124 (2%) Query: 7 LRKAGLKVTLPRVKILQ-MLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAG 65 LR+ +++T R I+ M+ S E H SA+ +Y+ L ++ LATVY L G Sbjct: 20 LREKHIRITETRKAIISYMIQSTE--HPSADKIYRDLQPNFPNMSLATVYNNLKVLVDEG 77 Query: 66 LVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHN 125 V + H ++VC G++ +FMD ++ KE + G+++ Sbjct: 78 FVSELKISNDLTTYYDFMGHQHVNVVCEICGKIADFMDVDVMDIAKEAHEQTGYKVTRIP 137 Query: 126 LVLY 129 ++ Y Sbjct: 138 VIAY 141 >6ILH-A nrPDB Length = 521 Score = 30.8 bits (68), Expect = 0.17, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 35 AEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHM 90 A ++Y ++ G G+ VY + QF G+ + HN + F +A + +HDHM Sbjct: 231 APELYHKMLVVG---GIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDHM 283 >5UNK-A nrPDB Length = 62 Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 9/44 (20%) Query: 34 SAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHA 77 +A+D+ K L E G V ++TV RVL RHN G A Sbjct: 24 TAKDLVKMLEETGTKVSISTVKRVL---------YRHNLKGRSA 58 >2KLB-A nrPDB Length = 154 Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust. Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 9/46 (19%) Query: 5 SELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVG 50 S+ R GL P ++I + E+ YK EAG D+G Sbjct: 103 SKFRNLGLTTAFPAIRI---------KQTPTENTYKLCEEAGTDLG 139 >6CHD-A nrPDB Length = 597 Score = 27.7 bits (60), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Query: 35 AEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHM 90 A ++Y ++ G G+ VY + QF G+ + HN + F +A + +HD M Sbjct: 299 APELYHKMLVVG---GIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDLM 351 >4YUX-A nrPDB Length = 304 Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust. Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%) Query: 91 VCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLV 127 +C + GE I ++D E+ ++ +RE GF V + L+ Sbjct: 205 ICCNQGESI-WLDLELIEKMSRFIRETGFASVQYALM 240 >4IZO-A nrPDB Length = 419 Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 56 RVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVR 115 R+ ++E + L+ R +G AVF LA + HH ++ + DA + Q+ R Sbjct: 214 RLPLKYEVSALIAR-GANGASAVFPLAQNTHHGGILSLSVVPAPAASDALVRDAQQAAAR 272 >5C0W-L nrPDB Length = 184 Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust. Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 8/45 (17%) Query: 59 TQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMD 103 QFE + + R NF G H FE +D + T ++I+ D Sbjct: 124 NQFEPS--ISRSNFQGKHTKFE------NDELAESTTTKIIDSTD 160 >1L8K-A nrPDB Length = 314 Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/89 (23%), Positives = 39/89 (43%), Gaps = 14/89 (15%) Query: 37 DVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTG 96 D LME G+D+ + V + ++ GL+ + D +M ++ Sbjct: 230 DTCLVLMEKGDDINIKQVLLNMRKYRM-GLI------------QTPDQLRFSYMAIIEGA 276 Query: 97 EVIEFMDAEIEKRQKEIVRERGFELVDHN 125 + I+ D+ I+KR KE+ +E DH+ Sbjct: 277 KCIK-GDSSIQKRWKELSKEDLSPAFDHS 304 >1YRH-A nrPDB Length = 211 Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust. Identities = 13/35 (37%), Positives = 24/35 (68%) Query: 19 VKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLAT 53 V++L++ ++A Q + +D +KA +EA +DV AT Sbjct: 38 VRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEAT 72 >5NIK-J nrPDB Length = 654 Score = 25.4 bits (54), Expect = 7.2, Method: Composition-based stats. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 19/96 (19%) Query: 25 LDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVF-ELAD 83 L +Q+ +S + +ALM G+ V+ E G + H+ + A+ +L D Sbjct: 145 LSGGQQQRVS---IARALMNGGQ---------VILADEPTGALDSHSGEEVMAILHQLRD 192 Query: 84 SGH------HDHMVCVDTGEVIEFMDAEIEKRQKEI 113 GH HD V VIE D EI + I Sbjct: 193 RGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAI 228 >4V19-Y nrPDB Length = 216 Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust. Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 6/87 (6%) Query: 41 ALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGH----AVFELADSGHHDHMVCVDTG 96 AL+ V L YR + R N G V ++D H + C D Sbjct: 5 ALLALASKVTLPPNYRYGMSRPGSLSDKRKNPPGTRRRRVPVEPISDEDWH--LFCGDKV 62 Query: 97 EVIEFMDAEIEKRQKEIVRERGFELVD 123 E++E DA + + +++R+R + +V+ Sbjct: 63 EILEGKDAGKQGKVVQVIRQRNWVVVE 89 >5OOL-V nrPDB Length = 216 Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust. Identities = 10/34 (29%), Positives = 22/34 (64%) Query: 89 HMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELV 122 ++ C DT E++E DA + + +++R+R + +V Sbjct: 55 YLFCGDTVEILEGKDAGKQGKVVQVIRQRNWVVV 88 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1MZB-A nrPDB 169 3e-43 2W57-A nrPDB 164 1e-41 5NBC-A nrPDB 161 7e-41 6D57-A nrPDB 148 9e-37 4RAY-A nrPDB 142 5e-35 5FD5-A nrPDB 139 3e-34 2O03-A nrPDB 139 3e-34 2XIG-A nrPDB 138 8e-34 3F8N-A nrPDB 136 3e-33 3MWM-A nrPDB 128 5e-31 4LMY-A nrPDB 126 4e-30 5NL9-A nrPDB 114 1e-26 6DK4-A nrPDB 110 2e-25 5L0P-A nrPDB 108 8e-25 3EYY-A nrPDB 103 3e-23 2FU4-A nrPDB 101 8e-23 Sequences not found previously or not previously below threshold: 4MTD-A nrPDB 63 3e-11 1TBX-A nrPDB 33 0.044 3WFS-C nrPDB 32 0.10 3WFO-A nrPDB 32 0.12 3R4K-A nrPDB 31 0.15 3ELE-A nrPDB 30 0.30 6ILH-A nrPDB 29 0.80 1B4A-A nrPDB 28 1.8 4XGC-A nrPDB 27 2.2 5WUS-A nrPDB 27 2.7 4WSI-A nrPDB 27 3.3 2VSX-E nrPDB 27 3.5 5WH8-A nrPDB 27 3.8 4NZZ-A nrPDB 27 4.0 4AIH-A nrPDB 26 4.2 2AN2-A nrPDB 26 5.0 3KCC-A nrPDB 26 5.4 3EC1-A nrPDB 26 5.4 3FZ0-A nrPDB 26 5.6 6BHC-A nrPDB 26 5.7 5UNK-A nrPDB 25 8.2 1EI3-C nrPDB 25 8.3 >1MZB-A nrPDB Length = 136 Score = 169 bits (428), Expect = 3e-43, Method: Composition-based stats. Identities = 134/134 (100%), Positives = 134/134 (100%) Query: 1 MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQ 60 MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQ Sbjct: 3 MVENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQ 62 Query: 61 FEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE 120 FEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE Sbjct: 63 FEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFE 122 Query: 121 LVDHNLVLYVRKKK 134 LVDHNLVLYVRKKK Sbjct: 123 LVDHNLVLYVRKKK 136 >2W57-A nrPDB Length = 150 Score = 164 bits (415), Expect = 1e-41, Method: Composition-based stats. Identities = 74/129 (57%), Positives = 100/129 (77%) Query: 4 NSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEA 63 N L+ AGLKVTLPR+KIL++L E +H+SAE++YK L++ GE++GLATVYRVL QF+ Sbjct: 5 NQALKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDD 64 Query: 64 AGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVD 123 AG+V RH+F+GG +VFEL+ HHDH+VC+D GEVIEF D IE+RQKEI + +L + Sbjct: 65 AGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTN 124 Query: 124 HNLVLYVRK 132 H+L LY + Sbjct: 125 HSLYLYGKC 133 >5NBC-A nrPDB Length = 140 Score = 161 bits (408), Expect = 7e-41, Method: Composition-based stats. Identities = 55/131 (41%), Positives = 84/131 (64%) Query: 3 ENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFE 62 +N +L++ G KVT PRV+IL++ + + +H+S +DV+ L G G+ATVYRVL QFE Sbjct: 4 KNLDLKEFGFKVTQPRVEILKLFEKNKDKHLSPDDVFSKLKAQGSTTGIATVYRVLNQFE 63 Query: 63 AAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELV 122 +AG++ R D ++EL HHDH++CV + EF IE QK+IV G E++ Sbjct: 64 SAGIINRLKLDNEQVMYELNQGEHHDHIICVKCNMIQEFYSPGIEALQKQIVESFGAEMI 123 Query: 123 DHNLVLYVRKK 133 D++L +YV+ K Sbjct: 124 DYSLNIYVKCK 134 >6D57-A nrPDB Length = 161 Score = 148 bits (373), Expect = 9e-37, Method: Composition-based stats. Identities = 49/125 (39%), Positives = 74/125 (59%), Gaps = 3/125 (2%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGE--DVGLATVYRVLTQFEAA 64 LR+ GLK T R +L+ L ++ H + E +Y + +A +VG+ATVYR L E A Sbjct: 23 LRQGGLKYTKQREVLLKTLYHSD-THYTPESLYMEIKQAEPDLNVGIATVYRTLNLLEEA 81 Query: 65 GLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDH 124 +V +F +ELA+ HHDHM+C + G++IEF + IE++Q I +E GF+L H Sbjct: 82 EMVTSISFGSAGKKYELANKPHHDHMICKNCGKIIEFENPIIERQQALIAKEHGFKLTGH 141 Query: 125 NLVLY 129 + LY Sbjct: 142 LMQLY 146 >4RAY-A nrPDB Length = 145 Score = 142 bits (357), Expect = 5e-35, Method: Composition-based stats. Identities = 50/121 (41%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Query: 9 KAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 68 G+K+T R I Q+L + H E+VY+ + +ATVYR + FE ++ Sbjct: 13 DKGMKMTDQRRVIAQVLSDSAD-HPDVEEVYRRATAKDPRISIATVYRTVRLFEEESILE 71 Query: 69 RHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVL 128 RH+F G A +E A S HHDH++ V++ VIEF EIE Q+EI R+ GF LV H L L Sbjct: 72 RHDFGDGRARYEEAPSEHHDHLIDVNSARVIEFTSPEIEALQREIARKHGFRLVGHRLEL 131 Query: 129 Y 129 Y Sbjct: 132 Y 132 >5FD5-A nrPDB Length = 141 Score = 139 bits (351), Expect = 3e-34, Method: Composition-based stats. Identities = 48/121 (39%), Positives = 74/121 (61%), Gaps = 1/121 (0%) Query: 9 KAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 68 + G+++T R I ++L+ +E H E++Y+ ++ + ++TVYR + FE AG++ Sbjct: 13 ERGMRMTEQRRVIARILEDSED-HPDVEELYRRSVKVDAKISISTVYRTVKLFEDAGIIA 71 Query: 69 RHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVL 128 RH+F G + +E HHDH++ + TG VIEF EIE Q+ I RE GF LVDH L L Sbjct: 72 RHDFRDGRSRYETVPEEHHDHLIDLKTGTVIEFRSPEIEALQERIAREHGFRLVDHRLEL 131 Query: 129 Y 129 Y Sbjct: 132 Y 132 >2O03-A nrPDB Length = 131 Score = 139 bits (351), Expect = 3e-34, Method: Composition-based stats. Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%) Query: 10 AGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVR 69 AG++ T R I +L++ + SA++++ L GE++GL TVYR L ++GLV Sbjct: 5 AGVRSTRQRAAISTLLETLDD-FRSAQELHDELRRRGENIGLTTVYRTLQSMASSGLVDT 63 Query: 70 HNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLY 129 + D G +V+ HH H+VC G IE D E+E E+ + GF V H + ++ Sbjct: 64 LHTDTGESVYRRCSEHHHHHLVCRSCGSTIEVGDHEVEAWAAEVATKHGFSDVSHTIEIF 123 Query: 130 VRK 132 Sbjct: 124 GTC 126 >2XIG-A nrPDB Length = 150 Score = 138 bits (347), Expect = 8e-34, Method: Composition-based stats. Identities = 37/129 (28%), Positives = 75/129 (58%), Gaps = 1/129 (0%) Query: 6 ELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAG 65 ++K GLK + R +++ +L + H+S E++ ++ + ++ +++VYR+L E Sbjct: 17 SIKKNGLKNSKQREEVVSVLYRS-GTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKEN 75 Query: 66 LVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHN 125 + +E+A HHDH++C+ G++IEF D EIE RQ E+V++ +L+ H+ Sbjct: 76 FISVLETSKSGRRYEIAAKEHHDHIICLHCGKIIEFADPEIENRQNEVVKKYQAKLISHD 135 Query: 126 LVLYVRKKK 134 + ++V K+ Sbjct: 136 MKMFVWCKE 144 >3F8N-A nrPDB Length = 145 Score = 136 bits (343), Expect = 3e-33, Method: Composition-based stats. Identities = 35/128 (27%), Positives = 70/128 (54%), Gaps = 2/128 (1%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 L++ G+++T R IL+ L ++ H +A+D+YKAL ++ +ATVY L F +GL Sbjct: 13 LKETGVRITPQRHAILEYLVNS-MAHPTADDIYKALEGKFPNMSVATVYNNLRVFRESGL 71 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNL 126 V + + F+ S H+ H +C + G++++F +++ ++ GF++ H L Sbjct: 72 VKELTYGDASSRFDFVTSDHY-HAICENCGKIVDFHYPGLDEVEQLAAHVTGFKVSHHRL 130 Query: 127 VLYVRKKK 134 +Y ++ Sbjct: 131 EIYGVCQE 138 >3MWM-A nrPDB Length = 139 Score = 128 bits (323), Expect = 5e-31, Method: Composition-based stats. Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 2/121 (1%) Query: 13 KVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNF 72 + T R + L E+ SA++++ L G+ VGL TVYR L AG V Sbjct: 11 RATRQRAAVSAALQEVEE-FRSAQELHDMLKHKGDAVGLTTVYRTLQSLADAGEVDVLRT 69 Query: 73 DGGHAVFELA-DSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNLVLYVR 131 G +V+ HH H+VC G+ +E +EK + I E G+ V H + ++ Sbjct: 70 AEGESVYRRCSTGDHHHHLVCRACGKAVEVEGPAVEKWAEAIAAEHGYVNVAHTVEIFGT 129 Query: 132 K 132 Sbjct: 130 C 130 >4LMY-A nrPDB Length = 163 Score = 126 bits (316), Expect = 4e-30, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 55/123 (44%), Gaps = 1/123 (0%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 LR+ +++T R I+ + + H SA+ +Y+ L ++ LATVY L G Sbjct: 20 LREKHIRITETRKAIISYMIQS-TEHPSADKIYRDLQPNFPNMSLATVYNNLKVLVDEGF 78 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNL 126 V + H ++VC G++ +FMD ++ KE + G+++ + Sbjct: 79 VSELKISNDLTTYYDFMGHQHVNVVCEICGKIADFMDVDVMDIAKEAHEQTGYKVTRIPV 138 Query: 127 VLY 129 + Y Sbjct: 139 IAY 141 >5NL9-A nrPDB Length = 151 Score = 114 bits (286), Expect = 1e-26, Method: Composition-based stats. Identities = 33/134 (24%), Positives = 71/134 (52%), Gaps = 8/134 (5%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 L AG+ VT+ R+++ +L S Q H++A+ V++ + E + AT++ L F G+ Sbjct: 18 LEDAGINVTVQRLQMANLLLSKPQ-HLTADQVFQLINEHMPNASRATIFNNLKLFAEKGI 76 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEF-MDAEIE-----KRQKEIVRERGFE 120 V G +++ ++ HH H + TGE+ + +D++++ + +++ + G Sbjct: 77 VNLLELKSGITLYD-SNVIHHHHAIDEKTGEIYDISLDSKLQEKVLSELKQDFKLKTGSS 135 Query: 121 LVDHNLVLYVRKKK 134 L + NL + ++ KK Sbjct: 136 LENCNLSITLKGKK 149 >6DK4-A nrPDB Length = 142 Score = 110 bits (274), Expect = 2e-25, Method: Composition-based stats. Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 6/131 (4%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGL 66 L+K LK T R+ +L++L E H + +++Y + + + LATVY+ L + GL Sbjct: 7 LKKHELKATPQRLCVLKILKRHE--HPNIDELYIEIKKEYPSISLATVYKNLNTLQEQGL 64 Query: 67 VVRHNFDGGHAVFELADSGHHDHMVCVDTG--EVIEFMDAEIEKRQKEIVRERGFELVDH 124 VV N +++ H H+VC G E + F DA++ + Q+ + ++ G + Sbjct: 65 VVEINVLNQKTCYDIY-EEEHIHVVCTKCGGIEDLSFKDAKLYEYQEHLEKKIGNLVNHL 123 Query: 125 NLVLYV-RKKK 134 ++ YV KK Sbjct: 124 SVCAYVDNCKK 134 >5L0P-A nrPDB Length = 353 Score = 108 bits (270), Expect = 8e-25, Method: Composition-based stats. Identities = 50/79 (63%), Positives = 66/79 (83%) Query: 4 NSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEA 63 N+ L+KAGLKVTLPR+KIL++L + H+SAED+YK L++ GE++GLATVYRVL QF+ Sbjct: 273 NTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDD 332 Query: 64 AGLVVRHNFDGGHAVFELA 82 AG+V RHNF+GG +VFEL Sbjct: 333 AGIVTRHNFEGGKSVFELT 351 >3EYY-A nrPDB Length = 145 Score = 103 bits (256), Expect = 3e-23, Method: Composition-based stats. Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 2/129 (1%) Query: 5 SELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAA 64 S+LR+ G ++T R +L+ +D+ E H + +D+ + + + ++TVYR L E Sbjct: 8 SDLRQRGYRLTPQRQLVLEAVDTLE--HATPDDILGEVRKTASGINISTVYRTLELLEEL 65 Query: 65 GLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDH 124 GLV + G + LAD HH H+VC D VIE + ++ + GF+ Sbjct: 66 GLVSHAHLGHGAPTYHLADRHHHIHLVCRDCTNVIEADLSVAADFTAKLREQFGFDTDMK 125 Query: 125 NLVLYVRKK 133 + ++ R + Sbjct: 126 HFAIFGRCE 134 >2FU4-A nrPDB Length = 83 Score = 101 bits (252), Expect = 8e-23, Method: Composition-based stats. Identities = 50/79 (63%), Positives = 66/79 (83%) Query: 4 NSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEA 63 N+ L+KAGLKVTLPR+KIL++L + H+SAED+YK L++ GE++GLATVYRVL QF+ Sbjct: 5 NTALKKAGLKVTLPRLKILEVLQEPDNHHVSAEDLYKRLIDMGEEIGLATVYRVLNQFDD 64 Query: 64 AGLVVRHNFDGGHAVFELA 82 AG+V RHNF+GG +VFEL Sbjct: 65 AGIVTRHNFEGGKSVFELT 83 >4MTD-A nrPDB Length = 171 Score = 63.1 bits (152), Expect = 3e-11, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 3/123 (2%) Query: 9 KAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 68 + +++T R+++L+ L S + +SA D+ L EA TVYR L G V Sbjct: 19 QRNVRLTPQRLEVLR-LMSLQDGAISAYDLLDLLREAEPQAKPPTVYRALDFLLEQGFVH 77 Query: 69 RHNFDGGHAVFELADSGHHDHM--VCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNL 126 + + + L D H +C G V E +E + + GF L + + Sbjct: 78 KVESTNSYVLCHLFDQPTHTSAMFICDRCGAVKEECAEGVEDIMHTLAAKMGFALRHNVI 137 Query: 127 VLY 129 + Sbjct: 138 EAH 140 >1TBX-A nrPDB Length = 99 Score = 32.7 bits (73), Expect = 0.044, Method: Composition-based stats. Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 6/71 (8%) Query: 12 LKVTL---PRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 68 +K T P +L L E ++ D+YK + + AT Y G V Sbjct: 1 MKSTPFFYPEAIVLAYLYDNEG--IATYDLYKKVNAEFP-MSTATFYDAKKFLIQEGFVK 57 Query: 69 RHNFDGGHAVF 79 G ++ Sbjct: 58 ERQERGEKRLY 68 >3WFS-C nrPDB Length = 512 Score = 31.5 bits (70), Expect = 0.10, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 35 AEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVD 94 E + L + ++ T ++V+ + G++ + G HH + + Sbjct: 220 VERITHELFKIMKE---KTAHKVIRELYEYGVLEAIIPEIGRLREVKDQGEHHIYPLDEH 276 Query: 95 TGEVIEFMDAEIEKRQKEIVRE 116 T + +E+++ IE R K + E Sbjct: 277 TLKTLEYLEQVIEDRAKYLSAE 298 >3WFO-A nrPDB Length = 525 Score = 31.5 bits (70), Expect = 0.12, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 3/82 (3%) Query: 35 AEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVD 94 E + L + ++ T ++V+ + G++ + G HH + + Sbjct: 220 VERITHELFKIMKE---KTAHKVIRELYEYGVLEAIIPEIGRLREVKDQGEHHIYPLDEH 276 Query: 95 TGEVIEFMDAEIEKRQKEIVRE 116 T + +E+++ IE R K + E Sbjct: 277 TLKTLEYLEQVIEDRAKYLSAE 298 >3R4K-A nrPDB Length = 260 Score = 31.1 bits (69), Expect = 0.15, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 3/38 (7%) Query: 47 EDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADS 84 + ATVYR++++ + AG V + G + L Sbjct: 31 SGMNKATVYRLMSELQEAGFVEQVE---GARSYRLGPQ 65 >3ELE-A nrPDB Length = 398 Score = 30.0 bits (66), Expect = 0.30, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%) Query: 16 LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVV 68 R I + L++ H +A+++Y + G L+ +R LT + Sbjct: 80 ETRAAIAEFLNNTHGTHFNADNLYMTM---GAAASLSICFRALTSDAYDEFIT 129 >6ILH-A nrPDB Length = 521 Score = 28.8 bits (63), Expect = 0.80, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 35 AEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHM 90 A ++Y ++ G G+ VY + QF G+ + HN + F +A + +HDHM Sbjct: 231 APELYHKMLVVG---GIDRVYEIGRQFRNEGIDLTHNPEFTTCEFYMAYADYHDHM 283 >1B4A-A nrPDB Length = 149 Score = 27.7 bits (60), Expect = 1.8, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 7/66 (10%) Query: 17 PRV-KILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFEAAGLVVRHNFDGG 75 R KI +++ S + + +++ L EAG +V ATV R + + + +V+ G Sbjct: 5 QRHIKIREIIMSNDIE--TQDELVDRLREAGFNVTQATVSRDIKEMQ----LVKVPMANG 58 Query: 76 HAVFEL 81 + L Sbjct: 59 RYKYSL 64 >4XGC-A nrPDB Length = 393 Score = 27.3 bits (59), Expect = 2.2, Method: Composition-based stats. Identities = 9/40 (22%), Positives = 18/40 (45%) Query: 7 LRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEAG 46 L G+++T PR +Q+ + +S E + L + Sbjct: 99 LEINGMRLTEPRQAYVQIYKQLTGKTVSWEQAHALLEKRF 138 >5WUS-A nrPDB Length = 460 Score = 26.9 bits (58), Expect = 2.7, Method: Composition-based stats. Identities = 6/31 (19%), Positives = 11/31 (35%) Query: 62 EAAGLVVRHNFDGGHAVFELADSGHHDHMVC 92 E G + H ++ + + HM C Sbjct: 397 EEDGHISYHKDHADCTMYYMCEGERKHHMPC 427 >4WSI-A nrPDB Length = 394 Score = 26.5 bits (57), Expect = 3.3, Method: Composition-based stats. Identities = 8/44 (18%), Positives = 23/44 (52%) Query: 2 VENSELRKAGLKVTLPRVKILQMLDSAEQRHMSAEDVYKALMEA 45 + NS+L+ + + P + L+ L + E ++ E++ + + + Sbjct: 304 LRNSDLKPYIIFIAPPSQERLRALLAKEGKNPKPEELREIIEKT 347 >2VSX-E nrPDB Length = 284 Score = 26.5 bits (57), Expect = 3.5, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Query: 82 ADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEIVRERGFELVDHNL 126 D H M G+V++ ++ +I E + G +LV H L Sbjct: 87 CDEPHWSSMYAQLCGKVVKELNPDITDETNE--GKTGPKLVLHYL 129 >5WH8-A nrPDB Length = 323 Score = 26.5 bits (57), Expect = 3.8, Method: Composition-based stats. Identities = 5/31 (16%), Positives = 10/31 (32%), Gaps = 1/31 (3%) Query: 59 TQFEAAGLVVRHNFDGGHAVFELADSGHHDH 89 +G ++ + +E HH H Sbjct: 294 NMVSESGQYIKRKLSQPKS-YESCGGHHHHH 323 >4NZZ-A nrPDB Length = 320 Score = 26.5 bits (57), Expect = 4.0, Method: Composition-based stats. Identities = 11/40 (27%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Query: 29 EQRHMSAEDV--YKALMEAGEDVGLATVYRVLTQFEAAGL 66 ++ +++A+DV Y E G + + + YR L F L Sbjct: 208 KKGYLTADDVQAYMNSWENGSVLSMLSYYRNLKIFTEEDL 247 >4AIH-A nrPDB Length = 151 Score = 26.1 bits (56), Expect = 4.2, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 8/58 (13%) Query: 56 RVLTQFEAAGLVVRHNFDGGHAVFELADSGHHDHMVCVDTGEVIEFMDAEIEKRQKEI 113 R L Q E GL+ RH + + + +IE +D I +KEI Sbjct: 65 RTLDQLEEKGLITRHTSANDRRAKRIKLTEQ--------SSPIIEQVDGVISSTRKEI 114 >2AN2-A nrPDB Length = 360 Score = 26.1 bits (56), Expect = 5.0, Method: Composition-based stats. Identities = 12/67 (17%), Positives = 20/67 (29%), Gaps = 17/67 (25%) Query: 36 EDVYKALMEAGEDVGLATVYRV---------------LTQFEAAG--LVVRHNFDGGHAV 78 E Y L + +G++T Y L ++ G +V H Sbjct: 249 EKRYDKLKKVASVIGISTNYNTDLWKDQALVELNKAVLYSYKKQGVSIVDHHTAASQFKR 308 Query: 79 FELADSG 85 FE + Sbjct: 309 FEEQEEE 315 >3KCC-A nrPDB Length = 260 Score = 25.7 bits (55), Expect = 5.4, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 21/55 (38%), Gaps = 3/55 (5%) Query: 19 VKILQMLDSAE-QRHMSAEDVYKALMEAGEDVGLA--TVYRVLTQFEAAGLVVRH 70 +L + + H + E G+ VG + TV R+L E L+ H Sbjct: 196 QTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCSRETVGRILKMLEDQNLISAH 250 >3EC1-A nrPDB Length = 369 Score = 25.7 bits (55), Expect = 5.4, Method: Composition-based stats. Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 9/43 (20%) Query: 92 CVDTGEVIEFMDAE---------IEKRQKEIVRERGFELVDHN 125 C+ G I+F + + +EK +E++ +R F L +N Sbjct: 7 CIGCGAAIQFENPKNAGYAPKSVLEKDAEEVICQRCFRLKHYN 49 >3FZ0-A nrPDB Length = 360 Score = 25.7 bits (55), Expect = 5.6, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%) Query: 16 LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYR-VLTQFEAAG 65 R L++L E+ S + VY+ L+ G +A R F G Sbjct: 106 PKRHAALEILKILEEAEPSDDVVYQ-LVALGPLTNVALALRLNPDLFSKLG 155 >6BHC-A nrPDB Length = 438 Score = 25.7 bits (55), Expect = 5.7, Method: Composition-based stats. Identities = 6/47 (12%), Positives = 20/47 (42%) Query: 16 LPRVKILQMLDSAEQRHMSAEDVYKALMEAGEDVGLATVYRVLTQFE 62 R+ + + ++ H+ ++ + ++ AT Y+ +F+ Sbjct: 235 PTRLIVSNFSQAKQKSHLVDPEILRDQSRLAPEIITATQYKKCDEFQ 281 >5UNK-A nrPDB Length = 62 Score = 25.4 bits (54), Expect = 8.2, Method: Composition-based stats. Identities = 12/25 (48%), Positives = 17/25 (68%) Query: 34 SAEDVYKALMEAGEDVGLATVYRVL 58 +A+D+ K L E G V ++TV RVL Sbjct: 24 TAKDLVKMLEETGTKVSISTVKRVL 48 >1EI3-C nrPDB Length = 409 Score = 25.4 bits (54), Expect = 8.3, Method: Composition-based stats. Identities = 13/90 (14%), Positives = 29/90 (32%), Gaps = 7/90 (7%) Query: 34 SAEDVYKALMEAGEDV-----GLATVYRVLTQFEAAGLVVRHNFDGGHAVFELADSGHHD 88 S E + + + E++ + + Q ++ + +A H Sbjct: 78 SIEQLTQKSKKIIEEIIRYENTILAHENTIQQLTDMHIMNSNKITQLKQK--IAQLESHC 135 Query: 89 HMVCVDTGEVIEFMDAEIEKRQKEIVRERG 118 C DT E+ E + + + R+ G Sbjct: 136 QEPCKDTAEIQETTGRDCQDIANKGARKSG 165 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.139 0.375 Lambda K H 0.267 0.0427 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,350,481 Number of Sequences: 36641 Number of extensions: 221635 Number of successful extensions: 8986 Number of sequences better than 10.0: 229 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 137 Number of HSP's that attempted gapping in prelim test: 8723 Number of HSP's gapped (non-prelim): 333 length of query: 134 length of database: 10,336,785 effective HSP length: 86 effective length of query: 48 effective length of database: 7,185,659 effective search space: 344911632 effective search space used: 344911632 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 54 (25.4 bits)