BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q03426
         (396 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

2R3V-A nrPDB                                                          802   0.0  
2R42-A nrPDB                                                          613   e-176
4HAC-B nrPDB                                                          109   2e-24
1KKH-A nrPDB                                                           86   2e-17
2HFU-A nrPDB                                                           62   4e-10
2X7I-A nrPDB                                                           57   2e-08
1WUU-A nrPDB                                                           42   4e-04
2AJ4-A nrPDB                                                           38   0.009
2A2C-A nrPDB                                                           37   0.013
3V5R-A nrPDB                                                           35   0.068
2OI2-A nrPDB                                                           35   0.084
3K85-A nrPDB                                                           34   0.11 
2DEI-A nrPDB                                                           29   3.4  
4PJ1-A nrPDB                                                           28   7.0  
3RC8-A nrPDB                                                           28   8.0  

>2R3V-A nrPDB
          Length = 396

 Score =  802 bits (2072), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 396/396 (100%), Positives = 396/396 (100%)

Query: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60
           MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR
Sbjct: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60

Query: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120
           AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC
Sbjct: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120

Query: 121 RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE 180
           RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE
Sbjct: 121 RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE 180

Query: 181 DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240
           DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP
Sbjct: 181 DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240

Query: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300
           RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM
Sbjct: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300

Query: 301 NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
           NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL
Sbjct: 301 NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360

Query: 361 TSCGFDCLETSIGAPGVSIHSATSLDSRVQQALDGL 396
           TSCGFDCLETSIGAPGVSIHSATSLDSRVQQALDGL
Sbjct: 361 TSCGFDCLETSIGAPGVSIHSATSLDSRVQQALDGL 396


>2R42-A nrPDB
          Length = 395

 Score =  613 bits (1581), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 322/393 (81%), Positives = 355/393 (90%)

Query: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60
           MLSEVLLVSAPGKVILHGEHAVVHGKVALAV+LNLRTFL L+P SNGKV L+LPN+GIK+
Sbjct: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNVGIKQ 60

Query: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120
            WDVA LQ LDT FLEQGDV  PT EQ+EKLK+VAGLP DC   E L++LAFLYLYL+IC
Sbjct: 61  VWDVATLQLLDTGFLEQGDVPAPTLEQLEKLKKVAGLPRDCVGNEGLSLLAFLYLYLAIC 120

Query: 121 RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE 180
           RKQR LPSLDI+VWSELPPGAGLGSSAAYSVC+AAALLT CEE+ NPLKD   +  W +E
Sbjct: 121 RKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEE 180

Query: 181 DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240
           DL+ INKWA++GER+IHGNPSGVDN+VSTWGGALRY QGK+SSLKR PALQILLTNTKVP
Sbjct: 181 DLKSINKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQGKMSSLKRLPALQILLTNTKVP 240

Query: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300
           R+T+ALVAGVR+RL+KFPEI+APLLTSIDAISLECERVLGEM  AP PEQYLVLEEL+DM
Sbjct: 241 RSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDM 300

Query: 301 NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
           NQHHLNALGVGHASLDQLCQVT A GLHSKLTGAGGGGCGITLLKPGLE+ +VEA KQAL
Sbjct: 301 NQHHLNALGVGHASLDQLCQVTAAHGLHSKLTGAGGGGCGITLLKPGLERAKVEAAKQAL 360

Query: 361 TSCGFDCLETSIGAPGVSIHSATSLDSRVQQAL 393
           T CGFDC ETSIGAPGVS+HSATS++  V+QAL
Sbjct: 361 TGCGFDCWETSIGAPGVSMHSATSIEDPVRQAL 393


>4HAC-B nrPDB
          Length = 321

 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/347 (30%), Positives = 156/347 (44%), Gaps = 77/347 (22%)

Query: 3   SEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAW 62
           S ++  SAPGK+ L GEHAVV+G+ A+A ++ LRT +R +                    
Sbjct: 19  SHMVSCSAPGKIYLFGEHAVVYGETAIACAVELRTRVRAE-------------------- 58

Query: 63  DVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRK 122
                  L+ S   Q  +   T    EK       P   AV E++             RK
Sbjct: 59  -------LNDSITIQSQIGR-TGLDFEKH------PYVSAVIEKM-------------RK 91

Query: 123 QRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDL 182
              +  + + V S++P G+GLGSSAA ++    AL                 N      L
Sbjct: 92  SIPINGVFLTVDSDIPVGSGLGSSAAVTIASIGAL-----------------NELFGFGL 134

Query: 183 EL--INKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240
            L  I K   + E  + G  S  D  VST+GG +   + +   LK +P   I++ +T V 
Sbjct: 135 SLQEIAKLGHEIEIKVQGAASPTDTYVSTFGGVVTIPERR--KLK-TPDCGIVIGDTGVF 191

Query: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300
            +T+ LVA VR     +P+++ PL+TSI  IS   E+++           Y  +  L+++
Sbjct: 192 SSTKELVANVRQLRESYPDLIEPLMTSIGKISRIGEQLV-------LSGDYASIGRLMNV 244

Query: 301 NQHHLNALGVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLKP 346
           NQ  L+ALGV    L QL    RA G   +K+TGAGGGGC + L  P
Sbjct: 245 NQGLLDALGVNILELSQLIYSARAAGAFGAKITGAGGGGCMVALTAP 291


>1KKH-A nrPDB
          Length = 317

 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 57/341 (16%)

Query: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65
           +++  P KVIL GEHAVV+G  A++++++L + + ++     ++ L+L ++      ++ 
Sbjct: 6   MIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSLGLNLN 65

Query: 66  RLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRA 125
            +++++ +    GD                     CA+   L        YL+I  K   
Sbjct: 66  EIKNINPNNF--GDFKYCL----------------CAIKNTLD-------YLNIEPK--- 97

Query: 126 LPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELI 185
                I + S++P   GLGSSA+ ++    A+                 N+  K+D   I
Sbjct: 98  -TGFKINISSKIPISCGLGSSASITIGTIKAV-------------SGFYNKELKDDE--I 141

Query: 186 NKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRA 245
            K  +  E+ I G  S  D +  T+ G L     K   +K            +  +N + 
Sbjct: 142 AKLGYMVEKEIQGKASITDTSTITYKGILEIKNNKFRKIKGEFE--------EFLKNCKF 193

Query: 246 LVAGVRNRLLKFPEIVAPL--LTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQH 303
           L+     R  K  E+V  +  + + D I  E ++V+ E  +    E +    +L+  N  
Sbjct: 194 LIVYAEKRKKKTAELVNEVAKIENKDEIFKEIDKVIDEALKIKNKEDF---GKLMTKNHE 250

Query: 304 HLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLL 344
            L  L +    LD++  +    G  +KLTGAGGGGC I L+
Sbjct: 251 LLKKLNISTPKLDRIVDIGNRFGFGAKLTGAGGGGCVIILV 291


>2HFU-A nrPDB
          Length = 332

 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 129/333 (38%), Gaps = 58/333 (17%)

Query: 12  GKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVARLQSLD 71
           GKVIL GEH VVHG  A+   ++  T  RL+      ++  +P            LQ  D
Sbjct: 20  GKVILFGEHFVVHGAEAIVAGISEYTECRLE------INPGVPG-----------LQVDD 62

Query: 72  TSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDI 131
                 G +     EQ++  +                VL  L + LS          L +
Sbjct: 63  QRPAIPGYIAQKRDEQIKAHQ---------------LVLDHLKVDLS-------GDGLKM 100

Query: 132 VVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQ 191
            +   L P +G+G+SA+  V  + AL    E     L D            E +N  AF 
Sbjct: 101 FIGGPLVPSSGIGASASDVVAFSRAL---SELYQLNLTD------------EEVNLSAFV 145

Query: 192 GERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRALVAGVR 251
           GE   HG PSG DN  +T+GG + Y +    S+ +  A Q  L    V     A  A V 
Sbjct: 146 GEGGYHGTPSGADNTAATYGGLILYRRQNGKSVFKPIAFQQRLYLVVVGTGINASTAKVV 205

Query: 252 NRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALGVG 311
           N + K  +   P+      +      ++ +  EA        L +L++ N      + V 
Sbjct: 206 NDVHKMKQ-QQPV--QFKRLYDNYTHIVSQAREALQKGDLQRLGQLMNANHDLCRQIDVS 262

Query: 312 HASLDQLCQVTRARG-LHSKLTGAGGGGCGITL 343
              L+ + Q  R  G L +KL+G G GG  + L
Sbjct: 263 CRELESIVQTCRTYGALGAKLSGTGRGGIAVAL 295


>2X7I-A nrPDB
          Length = 308

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 139/340 (40%), Gaps = 73/340 (21%)

Query: 10  APGKVILHGEHAVVHGKVALAVSLNL-RTFLRLQPHSNGKVDLSLPNIGIKRAWDVA-RL 67
           + GK+IL GEHAV  G+ A+AV  N  +  + ++   +G       ++     +D    L
Sbjct: 11  STGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEALESGNYSSIKSDVYDGMLYDAPDHL 70

Query: 68  QSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALP 127
           +SL   F+E  ++T P                                            
Sbjct: 71  KSLVNRFVELNNITEP-------------------------------------------- 86

Query: 128 SLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINK 187
            L + + + LPP  GLGSSAA +V    A      +              TKE+L     
Sbjct: 87  -LAVTIQTNLPPSRGLGSSAAVAVAFVRASYDFLGK------------SLTKEELIEKAN 133

Query: 188 WAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKR-SPALQILLTNTKVPRNTRAL 246
           WA   E++ HG PSG+D      G  + + +G   +LK  S    +++ +T V  +TR  
Sbjct: 134 WA---EQIAHGKPSGIDTQTIVSGKPVWFQKGHAETLKTLSLDGYMVVIDTGVKGSTRQA 190

Query: 247 VAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLN 306
           V  V ++L + P+ ++ +   I  + L    V+          ++  L ++ +     L 
Sbjct: 191 VHDV-HKLCEDPQYMSHV-KHIGKLVLRASDVI-------EHHKFEALADIFNECHADLK 241

Query: 307 ALGVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLK 345
           AL V H  ++QL ++ +  G +  KLTGAG GG  + L K
Sbjct: 242 ALTVSHDKIEQLMKIGKENGAIAGKLTGAGRGGSMLLLAK 281


>1WUU-A nrPDB
          Length = 399

 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 145/375 (38%), Gaps = 82/375 (21%)

Query: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65
           L VSAPG+V L GEH   +  + L ++L L T L   P  +G V L   + G   A +  
Sbjct: 37  LAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEG---ADEPQ 93

Query: 66  RLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLA--VLAFLYLYLSICRKQ 123
           RLQ              PT+++  +     G P       R A  V   +  Y +     
Sbjct: 94  RLQ-----------FPLPTAQRSLE----PGTP-------RWANYVKGVIQYYPAA---- 127

Query: 124 RALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLE 183
             LP    VV S +P G GL SSA+  V     L  +C +       G    R       
Sbjct: 128 -PLPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPD------SGTIAAR------- 173

Query: 184 LINKWAFQGERMIHGNPSGV-DNAVSTWGGALRYHQGKISSLKRS------PALQILLTN 236
              +   Q E    G P G+ D  +S  G           SL+ S      P L +L+TN
Sbjct: 174 --AQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITN 231

Query: 237 TKVPRNTRALVAGVRNRLLKFPEIVAPL----LTSIDAISLECER-------------VL 279
           + V  +  +    VR R  +  E+   L    L  +    LE  R             V+
Sbjct: 232 SNVRHSLASSEYPVRRR--QCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVV 289

Query: 280 GEM---GEAPAPEQ---YLVLEELIDMNQHHL-NALGVGHASLDQLCQVTRA-RGLH-SK 330
           GE+    +A A  +   Y     L+  +   L +   V    LDQL +   A  G++ S+
Sbjct: 290 GEIRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSR 349

Query: 331 LTGAGGGGCGITLLK 345
           +TG G GGC +TLL+
Sbjct: 350 MTGGGFGGCTVTLLE 364


>2AJ4-A nrPDB
          Length = 548

 Score = 37.7 bits (86), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query: 315 LDQLCQVTRARGLH-SKLTGAGGGGCGITLLKPGLEQPEVEATKQALTS 362
           +D++C +  + G + S+LTGAG GGC + L+ PG     +E  K+AL +
Sbjct: 468 IDKICSIALSNGSYGSRLTGAGWGGCTVHLV-PGGPNGNIEKVKEALAN 515


>2A2C-A nrPDB
          Length = 478

 Score = 37.4 bits (85), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 7/63 (11%)

Query: 287 APEQYL-VLEELIDMNQHHLNALGVGHAS---LDQLCQVTRARGLH-SKLTGAGGGGCGI 341
           APE  + +L EL  MNQ H++   +   S   LDQL  + R  G   S+LTGAG GGC +
Sbjct: 372 APENMVQLLGEL--MNQSHMSCRDMYECSCPELDQLVDICRKFGAQGSRLTGAGWGGCTV 429

Query: 342 TLL 344
           +++
Sbjct: 430 SMV 432


>3V5R-A nrPDB
          Length = 505

 Score = 34.7 bits (78), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)

Query: 316 DQLCQVTRARG-LHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
           +Q+C +  A G   S+LTGAG GGC I L+ P      VE  ++AL
Sbjct: 426 NQICSIALANGSFGSRLTGAGWGGCTIHLV-PSGANGNVEQVRKAL 470


>2OI2-A nrPDB
          Length = 292

 Score = 34.7 bits (78), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 93/213 (43%), Gaps = 30/213 (14%)

Query: 135 SELPPGAGLGSSAAYSVCLAAALLTVCE-EIPNPLKDGDCVNRWTKEDLELINKWAFQGE 193
           S +P   G+GSSAA S+    A+    + ++P+ + +   VNR                E
Sbjct: 81  SAIPEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLE-ILVNR---------------AE 124

Query: 194 RMIHGNPSGVDNAVSTWGGALRYHQG-KISSLKRSPALQILLTNTKVPRNTRALVAGVRN 252
            + H NPSG+D         +R+ +    + L+   +  +++ +T V  +TR  +  V+N
Sbjct: 125 MIAHMNPSGLDAKTCLSDQPIRFIKNVGFTELEMDLSAYLVIADTGVYGHTREAIQVVQN 184

Query: 253 RLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALGVGH 312
           +     +   P L ++  ++ + E  + +            L +++     HL  +GV  
Sbjct: 185 K----GKDALPFLHALGELTQQAEIAISQKDAEG-------LGQILSQAHLHLKEIGVSS 233

Query: 313 ASLDQLCQVTRARG-LHSKLTGAGGGGCGITLL 344
              D L +   + G L +K++G G GGC I L+
Sbjct: 234 LEADSLVETALSHGALGAKMSGGGLGGCIIALV 266


>3K85-A nrPDB
          Length = 357

 Score = 34.3 bits (77), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 115 LYLSICRKQRALP-SLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKD 170
           +Y  I R  R  P S  I  +++ P G+GLG+S+   VC+  A +   E +  PL D
Sbjct: 84  VYNRIIRDYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFI---EWLSLPLGD 137


>2DEI-A nrPDB
          Length = 350

 Score = 29.3 bits (64), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 17/68 (25%), Positives = 37/68 (54%), Gaps = 2/68 (2%)

Query: 5  VLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDV 64
          ++ V +PG+V L GEH        + +++NL T  +++   +G+V L   + G +R + +
Sbjct: 1  MIKVKSPGRVNLIGEHTDYTYGYVMPMAINLYT--KIEAEKHGEVILYSEHFGEERKFSL 58

Query: 65 ARLQSLDT 72
            L+  ++
Sbjct: 59 NDLRKENS 66


>4PJ1-A nrPDB
          Length = 558

 Score = 28.1 bits (61), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 31  VSLNLRTFLRLQPHSNGKVDLSLPN----IGIKRAWDVARLQSLDTSFLEQGDVTTPTSE 86
           ++LNL     +QPH  GKV   +      + +K   D A+++      +EQ DVTT   E
Sbjct: 332 LTLNLED---VQPHDLGKVGKVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTSEYE 388

Query: 87  QVEKLKE-VAGLPDDCAV 103
           + EKL E +A L D  AV
Sbjct: 389 K-EKLNERLAKLSDGVAV 405


>3RC8-A nrPDB
          Length = 677

 Score = 27.7 bits (60), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 22  VVHGKVALAVSLNLRTFLR---LQPHSNGKVDLSLPNIGIKRAWDVARLQSLDTSFLEQG 78
           V    + + ++L++R  +    ++P  N K +  L  I   +A  +A      +S  ++G
Sbjct: 377 VATDAIGMGLNLSIRRIIFYSLIKPSINEKGERELEPITTSQALQIAGRAGRFSSRFKEG 436

Query: 79  DVTTPTSEQVEKLKEVAGLPDD 100
           +VTT   E +  LKE+   P D
Sbjct: 437 EVTTMNHEDLSLLKEILKRPVD 458


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

2R3V-A nrPDB                                                          543   e-155
2R42-A nrPDB                                                          495   e-140
1KKH-A nrPDB                                                          273   8e-74
2HFU-A nrPDB                                                          251   4e-67
4HAC-B nrPDB                                                          243   1e-64
1WUU-A nrPDB                                                          224   4e-59
2X7I-A nrPDB                                                          215   2e-56

Sequences not found previously or not previously below threshold:

2DEI-A nrPDB                                                          113   1e-25
1S4E-A nrPDB                                                          107   9e-24
2OI2-A nrPDB                                                           95   4e-20
2A2C-A nrPDB                                                           86   3e-17
1PIE-A nrPDB                                                           84   8e-17
2AJ4-A nrPDB                                                           73   2e-13
3V5R-A nrPDB                                                           68   7e-12
4N3O-A nrPDB                                                           58   1e-08
5YYS-A nrPDB                                                           57   1e-08
3K85-A nrPDB                                                           52   4e-07
4UT4-A nrPDB                                                           52   5e-07
3K17-A nrPDB                                                           48   6e-06
4P52-A nrPDB                                                           41   8e-04
3GON-A nrPDB                                                           37   0.018
4RPF-A nrPDB                                                           36   0.026
3HUL-A nrPDB                                                           34   0.098
2V2V-A nrPDB                                                           33   0.26 
4JF0-A nrPDB                                                           29   3.7  
3UY5-A nrPDB                                                           28   5.5  

>2R3V-A nrPDB
          Length = 396

 Score =  543 bits (1398), Expect = e-155,   Method: Composition-based stats.
 Identities = 396/396 (100%), Positives = 396/396 (100%)

Query: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60
           MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR
Sbjct: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60

Query: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120
           AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC
Sbjct: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120

Query: 121 RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE 180
           RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE
Sbjct: 121 RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE 180

Query: 181 DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240
           DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP
Sbjct: 181 DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240

Query: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300
           RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM
Sbjct: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300

Query: 301 NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
           NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL
Sbjct: 301 NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360

Query: 361 TSCGFDCLETSIGAPGVSIHSATSLDSRVQQALDGL 396
           TSCGFDCLETSIGAPGVSIHSATSLDSRVQQALDGL
Sbjct: 361 TSCGFDCLETSIGAPGVSIHSATSLDSRVQQALDGL 396


>2R42-A nrPDB
          Length = 395

 Score =  495 bits (1273), Expect = e-140,   Method: Composition-based stats.
 Identities = 322/393 (81%), Positives = 355/393 (90%)

Query: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60
           MLSEVLLVSAPGKVILHGEHAVVHGKVALAV+LNLRTFL L+P SNGKV L+LPN+GIK+
Sbjct: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVALNLRTFLVLRPQSNGKVSLNLPNVGIKQ 60

Query: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120
            WDVA LQ LDT FLEQGDV  PT EQ+EKLK+VAGLP DC   E L++LAFLYLYL+IC
Sbjct: 61  VWDVATLQLLDTGFLEQGDVPAPTLEQLEKLKKVAGLPRDCVGNEGLSLLAFLYLYLAIC 120

Query: 121 RKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKE 180
           RKQR LPSLDI+VWSELPPGAGLGSSAAYSVC+AAALLT CEE+ NPLKD   +  W +E
Sbjct: 121 RKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEE 180

Query: 181 DLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVP 240
           DL+ INKWA++GER+IHGNPSGVDN+VSTWGGALRY QGK+SSLKR PALQILLTNTKVP
Sbjct: 181 DLKSINKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQGKMSSLKRLPALQILLTNTKVP 240

Query: 241 RNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDM 300
           R+T+ALVAGVR+RL+KFPEI+APLLTSIDAISLECERVLGEM  AP PEQYLVLEEL+DM
Sbjct: 241 RSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDM 300

Query: 301 NQHHLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
           NQHHLNALGVGHASLDQLCQVT A GLHSKLTGAGGGGCGITLLKPGLE+ +VEA KQAL
Sbjct: 301 NQHHLNALGVGHASLDQLCQVTAAHGLHSKLTGAGGGGCGITLLKPGLERAKVEAAKQAL 360

Query: 361 TSCGFDCLETSIGAPGVSIHSATSLDSRVQQAL 393
           T CGFDC ETSIGAPGVS+HSATS++  V+QAL
Sbjct: 361 TGCGFDCWETSIGAPGVSMHSATSIEDPVRQAL 393


>1KKH-A nrPDB
          Length = 317

 Score =  273 bits (698), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 81/341 (23%), Positives = 145/341 (42%), Gaps = 57/341 (16%)

Query: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65
           +++  P KVIL GEHAVV+G  A++++++L + + ++     ++ L+L ++      ++ 
Sbjct: 6   MIIETPSKVILFGEHAVVYGYRAISMAIDLTSTIEIKETQEDEIILNLNDLNKSLGLNLN 65

Query: 66  RLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRA 125
            +++++ +    GD                     CA+   L        YL+I  K   
Sbjct: 66  EIKNINPNNF--GDFKYCL----------------CAIKNTLD-------YLNIEPK--- 97

Query: 126 LPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELI 185
                I + S++P   GLGSSA+ ++    A+                 N+  K+D   I
Sbjct: 98  -TGFKINISSKIPISCGLGSSASITIGTIKAV-------------SGFYNKELKDD--EI 141

Query: 186 NKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRA 245
            K  +  E+ I G  S  D +  T+ G L     K   +K            +  +N + 
Sbjct: 142 AKLGYMVEKEIQGKASITDTSTITYKGILEIKNNKFRKIKGEFE--------EFLKNCKF 193

Query: 246 LVAGVRNRLLKFPEIVAPL--LTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQH 303
           L+     R  K  E+V  +  + + D I  E ++V+ E  +    E +    +L+  N  
Sbjct: 194 LIVYAEKRKKKTAELVNEVAKIENKDEIFKEIDKVIDEALKIKNKEDF---GKLMTKNHE 250

Query: 304 HLNALGVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITLL 344
            L  L +    LD++  +    G  +KLTGAGGGGC I L+
Sbjct: 251 LLKKLNISTPKLDRIVDIGNRFGFGAKLTGAGGGGCVIILV 291


>2HFU-A nrPDB
          Length = 332

 Score =  251 bits (640), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 87/343 (25%), Positives = 132/343 (38%), Gaps = 58/343 (16%)

Query: 12  GKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVARLQSLD 71
           GKVIL GEH VVHG  A+   ++  T  RL+      ++  +P            LQ  D
Sbjct: 20  GKVILFGEHFVVHGAEAIVAGISEYTECRLE------INPGVPG-----------LQVDD 62

Query: 72  TSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDI 131
                 G +     EQ++  +                VL  L + LS          L +
Sbjct: 63  QRPAIPGYIAQKRDEQIKAHQ---------------LVLDHLKVDLS-------GDGLKM 100

Query: 132 VVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQ 191
            +   L P +G+G+SA+  V  + AL    E     L D            E +N  AF 
Sbjct: 101 FIGGPLVPSSGIGASASDVVAFSRAL---SELYQLNLTD------------EEVNLSAFV 145

Query: 192 GERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRALVAGVR 251
           GE   HG PSG DN  +T+GG + Y +    S+ +  A Q  L    V     A  A V 
Sbjct: 146 GEGGYHGTPSGADNTAATYGGLILYRRQNGKSVFKPIAFQQRLYLVVVGTGINASTAKVV 205

Query: 252 NRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALGVG 311
           N + K  +   P+      +      ++ +  EA        L +L++ N      + V 
Sbjct: 206 NDVHKMKQ-QQPV--QFKRLYDNYTHIVSQAREALQKGDLQRLGQLMNANHDLCRQIDVS 262

Query: 312 HASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLKPGLEQPEV 353
              L+ + Q  R  G L +KL+G G GG  + L     ++  +
Sbjct: 263 CRELESIVQTCRTYGALGAKLSGTGRGGIAVALAASSDQRDAI 305


>4HAC-B nrPDB
          Length = 321

 Score =  243 bits (619), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 106/363 (29%), Positives = 159/363 (43%), Gaps = 77/363 (21%)

Query: 3   SEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAW 62
           S ++  SAPGK+ L GEHAVV+G+ A+A ++ LRT +R +                    
Sbjct: 19  SHMVSCSAPGKIYLFGEHAVVYGETAIACAVELRTRVRAE-------------------- 58

Query: 63  DVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRK 122
                  L+ S   Q  +   T    EK       P   AV E++             RK
Sbjct: 59  -------LNDSITIQSQIGR-TGLDFEKH------PYVSAVIEKM-------------RK 91

Query: 123 QRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDL 182
              +  + + V S++P G+GLGSSAA ++    AL  +                     L
Sbjct: 92  SIPINGVFLTVDSDIPVGSGLGSSAAVTIASIGALNELFG---------------FGLSL 136

Query: 183 ELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRN 242
           + I K   + E  + G  S  D  VST+GG +   +     LK  P   I++ +T V  +
Sbjct: 137 QEIAKLGHEIEIKVQGAASPTDTYVSTFGGVVTIPER--RKLKT-PDCGIVIGDTGVFSS 193

Query: 243 TRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQ 302
           T+ LVA VR     +P+++ PL+TSI  IS   E+++           Y  +  L+++NQ
Sbjct: 194 TKELVANVRQLRESYPDLIEPLMTSIGKISRIGEQLV-------LSGDYASIGRLMNVNQ 246

Query: 303 HHLNALGVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLKPGLEQPEVEATKQALT 361
             L+ALGV    L QL    RA G   +K+TGAGGGGC + L  P     +     +A+ 
Sbjct: 247 GLLDALGVNILELSQLIYSARAAGAFGAKITGAGGGGCMVALTAP----EKCNQVAEAVA 302

Query: 362 SCG 364
             G
Sbjct: 303 GAG 305


>1WUU-A nrPDB
          Length = 399

 Score =  224 bits (571), Expect = 4e-59,   Method: Composition-based stats.
 Identities = 98/373 (26%), Positives = 138/373 (36%), Gaps = 78/373 (20%)

Query: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65
           L VSAPG+V L GEH   +  + L ++L L T L   P  +G V L   + G   A +  
Sbjct: 37  LAVSAPGRVNLIGEHTDYNQGLVLPMALELMTVLVGSPRKDGLVSLLTTSEG---ADEPQ 93

Query: 66  RLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRA 125
           RLQ              PT+++  +     G P          V   +  Y +       
Sbjct: 94  RLQ-----------FPLPTAQRSLE----PGTPRWANY-----VKGVIQYYPAA-----P 128

Query: 126 LPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELI 185
           LP    VV S +P G GL SSA+  V     L  +C +       G    R         
Sbjct: 129 LPGFSAVVVSSVPLGGGLSSSASLEVATYTFLQQLCPD------SGTIAAR--------- 173

Query: 186 NKWAFQGERMIHGNPSGV-DNAVSTWGGALRYHQGKISSLKRS------PALQILLTNTK 238
            +   Q E    G P G+ D  +S  G           SL+ S      P L +L+TN+ 
Sbjct: 174 AQVCQQAEHSFAGMPCGIMDQFISLMGQKGHALLIDCRSLETSLVPLSDPKLAVLITNSN 233

Query: 239 VPRNTRALVAGVRNRLLKFPEIVAPL----LTSIDAISLECER-------------VLGE 281
           V  +  +    VR R  +  E+   L    L  +    LE  R             V+GE
Sbjct: 234 VRHSLASSEYPVRRR--QCEEVARALGKESLREVQLEELEAARDLVSKEGFRRARHVVGE 291

Query: 282 ------MGEAPAPEQYLVLEELIDMNQHHL-NALGVGHASLDQLCQVTRA-RGL-HSKLT 332
                    A     Y     L+  +   L +   V    LDQL +   A  G+  S++T
Sbjct: 292 IRRTAQAAAALRRGDYRAFGRLMVESHRSLRDDYEVSCPELDQLVEAALAVPGVYGSRMT 351

Query: 333 GAGGGGCGITLLK 345
           G G GGC +TLL+
Sbjct: 352 GGGFGGCTVTLLE 364


>2X7I-A nrPDB
          Length = 308

 Score =  215 bits (548), Expect = 2e-56,   Method: Composition-based stats.
 Identities = 84/341 (24%), Positives = 139/341 (40%), Gaps = 73/341 (21%)

Query: 9   SAPGKVILHGEHAVVHGKVALAVSLNL-RTFLRLQPHSNGKVDLSLPNIGIKRAWDVA-R 66
            + GK+IL GEHAV  G+ A+AV  N  +  + ++   +G       ++     +D    
Sbjct: 10  ESTGKIILIGEHAVTFGEPAIAVPFNAGKIKVLIEALESGNYSSIKSDVYDGMLYDAPDH 69

Query: 67  LQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRAL 126
           L+SL   F+E  ++T P                                           
Sbjct: 70  LKSLVNRFVELNNITEP------------------------------------------- 86

Query: 127 PSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELIN 186
             L + + + LPP  GLGSSAA +V    A      +              TKE+L    
Sbjct: 87  --LAVTIQTNLPPSRGLGSSAAVAVAFVRASYDFLGK------------SLTKEELIEKA 132

Query: 187 KWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKR-SPALQILLTNTKVPRNTRA 245
            WA   E++ HG PSG+D      G  + + +G   +LK  S    +++ +T V  +TR 
Sbjct: 133 NWA---EQIAHGKPSGIDTQTIVSGKPVWFQKGHAETLKTLSLDGYMVVIDTGVKGSTRQ 189

Query: 246 LVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHL 305
            V  V ++L + P+ ++ +   I  + L    V+          ++  L ++ +     L
Sbjct: 190 AVHDV-HKLCEDPQYMSHV-KHIGKLVLRASDVI-------EHHKFEALADIFNECHADL 240

Query: 306 NALGVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLK 345
            AL V H  ++QL ++ +  G +  KLTGAG GG  + L K
Sbjct: 241 KALTVSHDKIEQLMKIGKENGAIAGKLTGAGRGGSMLLLAK 281


>2DEI-A nrPDB
          Length = 350

 Score =  113 bits (282), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 70/366 (19%), Positives = 116/366 (31%), Gaps = 79/366 (21%)

Query: 5   VLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDV 64
           ++ V +PG+V L GEH        + +++NL T +  + H  G+V L   + G +R + +
Sbjct: 1   MIKVKSPGRVNLIGEHTDYTYGYVMPMAINLYTKIEAEKH--GEVILYSEHFGEERKFSL 58

Query: 65  ARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQR 124
             L+                                    E   +     ++  +     
Sbjct: 59  NDLR-----------------------------------KENSWIDYVKGIFWVLKESDY 83

Query: 125 ALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLEL 184
            +  +   V   LP GAGL SSA++ V +   L  +                  K D   
Sbjct: 84  EVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYN---------------LKLDSLS 128

Query: 185 INKWAFQGERMIHGNPSGV-DNAVSTWGGALRY-----HQGKISSLKRSPALQILLTNTK 238
               A + E    G P G+ D     +G          H      +     + IL+  T 
Sbjct: 129 KVLLAKKAENEFVGVPCGILDQFAVVFGREGNVIFLDTHTLDYEYIPFPKDVSILVFYTG 188

Query: 239 VPRNTRALVAGVRNRLLK----------FPEIVA-------PLLTS-IDAISLECERVLG 280
           V R   +     R  + +            E+         PL       I  E  RVL 
Sbjct: 189 VRRELASSEYAERKHIAEESLKILGKGSSKEVREGELSKLPPLHRKFFGYIVRENARVL- 247

Query: 281 EMGEAPAPEQYLVLEELIDMNQ-HHLNALGVGHASLDQLCQVTRARG-LHSKLTGAGGGG 338
           E+ +A        + +++            V    LD   +     G   ++LTGAG GG
Sbjct: 248 EVRDALKEGNVEEVGKILTTAHWDLAKNYEVSCKELDFFVERALKLGAYGARLTGAGFGG 307

Query: 339 CGITLL 344
             I L+
Sbjct: 308 SAIALV 313


>1S4E-A nrPDB
          Length = 352

 Score =  107 bits (266), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 67/365 (18%), Positives = 114/365 (31%), Gaps = 79/365 (21%)

Query: 6   LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVA 65
           + V +PG+V L GEH        + ++++L T +  + +                     
Sbjct: 4   ITVKSPGRVNLIGEHTDYTYGYVMPMAIDLYTIITAEKYD-------------------- 43

Query: 66  RLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRA 125
           ++Q     F E+   T                  D    E   +     +   + ++   
Sbjct: 44  KVQLYSEHFNEEKTFTL-----------------DNLTKEGSWIDYVKGVLWVLIQEGYK 86

Query: 126 LPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELI 185
           +  L   +  +LP GAGL SSA++ V +   L  +     +PLK                
Sbjct: 87  IGGLKGKITGDLPLGAGLSSSASFEVGILEVLNQLYNLNIDPLKKALLAK---------- 136

Query: 186 NKWAFQGERMIHGNPSGV-DNAVSTWGGA-----LRYHQGKISSLKRSPALQILLTNTKV 239
                + E    G P G+ D     +G       L     +   +     + +L+  T V
Sbjct: 137 -----KAENEFVGVPCGILDQFAVVFGKKDNVIFLDTQTLQYEYIPFPKDVSVLVFYTGV 191

Query: 240 PRNTRALVAGVRNR----------LLKFPEIVA-------PLLTS-IDAISLECERVLGE 281
            R   +     R R               E+         PL       I  E  RVL E
Sbjct: 192 KRELASSEYAERKRIAEESLRILGKESSKEVTEKDLGKLPPLHRKFFSYIVRENARVL-E 250

Query: 282 MGEAPAPEQYLVLEELIDMNQ-HHLNALGVGHASLDQLCQVTRARG-LHSKLTGAGGGGC 339
           + +A        + +++            V    LD   +     G   ++LTGAG GG 
Sbjct: 251 VRDALKEGDIEKVGKILTTAHWDLAENYRVSCEELDFFVKKAMELGAYGARLTGAGFGGS 310

Query: 340 GITLL 344
            I L+
Sbjct: 311 AIALV 315


>2OI2-A nrPDB
          Length = 292

 Score = 95.0 bits (234), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 68/347 (19%), Positives = 124/347 (35%), Gaps = 84/347 (24%)

Query: 1   MLSEVLLVSAPGKVILHGEHAVVHGKVALAVSL-NLRTFLRLQPHSNGKVDLSLPNIGIK 59
           M  +V +  A  K+IL GEHAVV+G  A+++ L  +    ++           +P     
Sbjct: 1   MTKKVGVGQAHSKIILIGEHAVVYGYPAISLPLLEVEVTCKV-----------VPAESPW 49

Query: 60  RAWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSI 119
           R ++   L                                             + +Y S+
Sbjct: 50  RLYEEDTLS--------------------------------------------MAVYASL 65

Query: 120 CRKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTK 179
                    +   + S +P   G+GSSAA S+    A+    +           VNR   
Sbjct: 66  EYLNITEACIRCEIDSAIPEKRGMGSSAAISIAAIRAVFDYYQADLPHDVLEILVNR--- 122

Query: 180 EDLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRY-HQGKISSLKRSPALQILLTNTK 238
                        E + H NPSG+D         +R+      + L+   +  +++ +T 
Sbjct: 123 ------------AEMIAHMNPSGLDAKTCLSDQPIRFIKNVGFTELEMDLSAYLVIADTG 170

Query: 239 VPRNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELI 298
           V  +TR  +  V+N+         P L ++  ++ + E  + +       +    L +++
Sbjct: 171 VYGHTREAIQVVQNKGKD----ALPFLHALGELTQQAEIAISQ-------KDAEGLGQIL 219

Query: 299 DMNQHHLNALGVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLL 344
                HL  +GV     D L +   + G L +K++G G GGC I L+
Sbjct: 220 SQAHLHLKEIGVSSLEADSLVETALSHGALGAKMSGGGLGGCIIALV 266


>2A2C-A nrPDB
          Length = 478

 Score = 85.8 bits (210), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 63/378 (16%), Positives = 114/378 (30%), Gaps = 44/378 (11%)

Query: 8   VSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDL-SLPNIGIKRAWDVAR 66
           V APG+V + GEH    G   L +++     + ++P     + L +   +    +     
Sbjct: 58  VRAPGRVNIIGEHIDYCGYSVLPMAVEQDVLIAVEPVKTYALQLANTNPLYPDFSTSANN 117

Query: 67  LQSLDTSFLEQGDV--TTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQR 124
           +Q   T  L            ++   L  + G+          +        L  C    
Sbjct: 118 IQIDKTKPLWHNYFLCGLKGIQEHFGLSNLTGMNCLVDGNIPPSSGLSSSSALVCCAGLV 177

Query: 125 ALPSLDIVVWSELPP--------------GAGLGSSAAYSVCLAAA-LLTVCEEIPNPLK 169
            L  L   + S++                G G+  S ++      A L+         +K
Sbjct: 178 TLTVLGRNL-SKVELAEICAKSERYIGTEGGGMDQSISFLAEEGTAKLIEFSPLRATDVK 236

Query: 170 DGDCVNRWTKEDLELINKWA------FQGERMIHGNPSGVDNAVSTWGGALRYHQGKISS 223
                          +NK A         E  +             W   LR  + +   
Sbjct: 237 LPSGAVFVIANSCVEMNKAATSHFNIRVMECRLAAK-LLAKYKSLQWDKVLRLEEVQA-K 294

Query: 224 LKRSPALQILLTNTKVPRNTRALVAGVRNRLLKFPEIVAPLLTS------IDAISLECER 277
           L  S    +L+T   +           R   +   E+   +L+       I  +    + 
Sbjct: 295 LGISLEEMLLVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKH 354

Query: 278 VLGEMGEAPAPEQY---------LVLEELIDMNQHHLNA-LGVGHASLDQLCQVTRARGL 327
           V  E       ++           +L EL++ +              LDQL  + R  G 
Sbjct: 355 VYSEAARVLQFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCPELDQLVDICRKFGA 414

Query: 328 -HSKLTGAGGGGCGITLL 344
             S+LTGAG GGC ++++
Sbjct: 415 QGSRLTGAGWGGCTVSMV 432


>1PIE-A nrPDB
          Length = 419

 Score = 84.2 bits (206), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 59/372 (15%), Positives = 116/372 (31%), Gaps = 81/372 (21%)

Query: 10  APGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVARLQS 69
           +PG++ L GEH   +G      S+ + T    +   + KV                  + 
Sbjct: 53  SPGRINLIGEHTDYNGGYVFPASITIGTTGLARLREDKKV------------------KL 94

Query: 70  LDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSL 129
              +F + G +     E  +K              E  +      + +            
Sbjct: 95  YSENFPKLGVIEFDLDEVEKKDG------------ELWSNYVKGMIVMLKGAGYEIDKGF 142

Query: 130 DIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWA 189
           ++++  E+P  +GL SSA+  + +   L  +       L                + +  
Sbjct: 143 ELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRL---------------ELVQLG 187

Query: 190 FQGERMIHGNPSGV-DNAVSTWGGALRYHQGKISSLKRSP------ALQILLTNTKVPRN 242
            + E    G  SG+ D     +G   +  +   ++LK            I++ NT  PR 
Sbjct: 188 QKTENDYIGVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVELRDYDIVIMNTNKPRA 247

Query: 243 TRALVAGVRN-------RLLKFPEIVAPLLTSIDAISLECERVLGE-------------- 281
                   R        + ++    +  L    +        ++G+              
Sbjct: 248 LTESKYNERFAETREALKRMQTRLDIQSLGELSNEEFDANTDLIGDETLIKRARHAVYEN 307

Query: 282 -----MGEAPAPEQYLVLEELIDMNQHHL-NALGVGHASLDQLCQVTRARG--LHSKLTG 333
                  +A          EL++ +   L +   V    LD L +  + +   L +++TG
Sbjct: 308 NRTKIAQKAFVAGNLTKFGELLNASHASLKDDYEVTGLELDTLAETAQKQAGVLGARMTG 367

Query: 334 AGGGGCGITLLK 345
           AG GGC I L+ 
Sbjct: 368 AGFGGCAIALVA 379


>2AJ4-A nrPDB
          Length = 548

 Score = 73.1 bits (177), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 247 VAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLN 306
            + VR ++LK  +    + +    + L+  +++         + +     L++ +Q   +
Sbjct: 400 TSPVRFQVLKLYQRAKHVYSESLRV-LKAVKLMTTASFTADEDFFKQFGALMNESQASCD 458

Query: 307 AL-GVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLKPGLEQPEVEATKQALTS 362
            L       +D++C +  + G   S+LTGAG GGC + L+ PG     +E  K+AL +
Sbjct: 459 KLYECSCPEIDKICSIALSNGSYGSRLTGAGWGGCTVHLV-PGGPNGNIEKVKEALAN 515



 Score = 57.7 bits (137), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 78/220 (35%), Gaps = 28/220 (12%)

Query: 10  APGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVARLQS 69
           +PG+V L GEH        L ++++      ++  +     ++L N       D    Q 
Sbjct: 70  SPGRVNLIGEHIDYCDFSVLPLAIDFDMLCAVKVLNEKNPSITLINA------DPKFAQR 123

Query: 70  LDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSL 129
                L+   VT   S          GL    +  ++LA   F             L  L
Sbjct: 124 KFDLPLDGSYVTIDPSVSDWSNYFKCGLHVAHSFLKKLAPERF---------ASAPLAGL 174

Query: 130 DIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWA 189
            +    ++P G+GL SSAA+   +A A++           +       +K++L  I   A
Sbjct: 175 QVFCEGDVPTGSGLSSSAAFICAVALAVVKA---------NMGPGYHMSKQNLMRITVVA 225

Query: 190 FQGERMIHGNPSGVDNAVSTWGGALRYHQGKIS-SLKRSP 228
              E  +  N  G+D A S  G        +    LK +P
Sbjct: 226 ---EHYVGVNNGGMDQAASVCGEEDHALYVEFKPQLKATP 262


>3V5R-A nrPDB
          Length = 505

 Score = 68.1 bits (164), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 61/179 (34%), Gaps = 29/179 (16%)

Query: 204 DNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRALVAGVRNRL-LKFPEIVA 262
           +N    W G +       + ++R   +  L+  +   + +   V      L     E   
Sbjct: 299 ENQAQPWNGDI------GTGIERLLKMLQLVEESFSRKKSGFTVHEASTALNCSREEFTR 352

Query: 263 ------PLLTSIDAISLECERVLGEMGEAPAPEQ-------------YLVLEELIDMNQH 303
                 P+   +  +    + V  E        +             +     L++ +Q 
Sbjct: 353 DYLTTFPVRFQVLKLYQRAKHVYSESLRVLKALKMMTSATFHTDEDFFTDFGRLMNESQA 412

Query: 304 HLNAL-GVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
             + L        +Q+C +  A G   S+LTGAG GGC I L+  G     VE  ++AL
Sbjct: 413 SCDKLYECSCIETNQICSIALANGSFGSRLTGAGWGGCTIHLVPSG-ANGNVEQVRKAL 470



 Score = 58.4 bits (139), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/248 (15%), Positives = 72/248 (29%), Gaps = 43/248 (17%)

Query: 7   LVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVAR 66
           +  +PG+V L GEH        L +++++     ++        ++L N   K       
Sbjct: 26  IARSPGRVNLIGEHIDYCDFSVLPLAIDVDMLCAVKILDEKNPSITLTNADPK------- 78

Query: 67  LQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRAL 126
                     Q     P       +        +          ++L            L
Sbjct: 79  --------FAQRKFDLPLDGSYMAIDPSVSEWSNYFKCGLHVAHSYLKKIAPERFNNTPL 130

Query: 127 PSLDIVVWSELPPGAGLGS--SAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLEL 184
               I   S++P G GL S  + A ++    A                 + +      + 
Sbjct: 131 VGAQIFCQSDIPTGGGLSSAFTCAAALATIRA----------------NMGKNFDISKKD 174

Query: 185 INKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKIS-SLKRSP---------ALQILL 234
           + +     E  +  N  G+D A S +G        +    LK +P          +  ++
Sbjct: 175 LTRITAVAEHYVGVNNGGMDQATSVYGEEDHALYVEFRPKLKATPFKFPQLKNHEISFVI 234

Query: 235 TNTKVPRN 242
            NT V  N
Sbjct: 235 ANTLVKSN 242


>4N3O-A nrPDB
          Length = 342

 Score = 57.7 bits (137), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 60/344 (17%), Positives = 118/344 (34%), Gaps = 61/344 (17%)

Query: 24  HGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWDVARLQSLDTSFLEQGDVTTP 83
           +    L  +++L     L    +GK+    P+      ++       D            
Sbjct: 31  YTGYVLNATISLYIHCTLIKREDGKIIFDSPDTNSYCEYESKEFLGND------------ 78

Query: 84  TSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDIVVWSELPPGAGL 143
                                 +L +   +Y  +     ++ L S  +  +S++P G+GL
Sbjct: 79  ---------------------GKLDIFKSIYNRIVKDFTKKPL-SFSLHTYSDVPSGSGL 116

Query: 144 GSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQGERMIHGNPSGV 203
           G S+   V +  A     E +  PL                I K A++ ER   G   G 
Sbjct: 117 GGSSTLVVGVIKA---FAEWLNLPL------------GEYEIAKLAYEIEREDLGIVGGA 161

Query: 204 -DNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRALVAGVRNRLLKFPEIVA 262
            D   +T+GG   ++  +  + KR     + + N          V    N   +  +I  
Sbjct: 162 QDQYAATFGG---FNFMEFYNNKRVIVNPLRIKNWIASELEARTVLYFTNITREAKDIEE 218

Query: 263 PLLTSI-DAISLECERVLGE----MGEAPAPEQYLVLEELIDMNQHHLNALG--VGHASL 315
                + D  SLE    + +    M EA     +  L +++  +      +   V +  L
Sbjct: 219 HKKGKLGDEKSLEAMHAIKQDAIKMKEALFRADFGTLAQILGKSWRSKKIISEIVSNDEL 278

Query: 316 DQLCQVTRARGLHS-KLTGAGGGGCGITLLKPGLEQPEVEATKQ 358
           +++ ++    G +S K +GAG GG     + P  +   ++A ++
Sbjct: 279 ERIYKLAIDNGAYSGKTSGAGAGGFMFFFVDPTKKYNLIKALRK 322


>5YYS-A nrPDB
          Length = 949

 Score = 56.9 bits (135), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 50/266 (18%), Positives = 98/266 (36%), Gaps = 18/266 (6%)

Query: 86  EQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRA-LPSLDIVVWSELPPGAGLG 144
           +  +K+     +P         A       Y S+  + +     +++ + + +P G+GLG
Sbjct: 658 QDYKKIGSPFSIPKAALSLAGFAPAFSAVSYASLEEQLKDFGAGIEVTLLAAIPAGSGLG 717

Query: 145 SSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINK-WAFQGERMIHGNPSGV 203
           +S+  +  +  A+   C    +  K+  C      E L      W  Q   ++ G     
Sbjct: 718 TSSILASTVLGAINDFCGLAWD--KNEICQRTLVLEQLLTTGGGWQDQYGGVLQGVKLLQ 775

Query: 204 DNAVSTWGGALRYHQGKISSLKRSPALQ--ILLTNTKVPRNTRALVAGVRNRLLKFPEIV 261
             A       +R+       L   P  +   LL  T + R  + ++A + + +     + 
Sbjct: 776 TEAGFAQSPLVRWLPDH---LFTHPEYKDCHLLYYTGITRTAKGILAEIVSSMFLNSSLH 832

Query: 262 APLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALGVGH--ASLDQLC 319
             LL+ + A +L       +M EA     ++    L+        AL  G    +++ + 
Sbjct: 833 LNLLSEMKAHAL-------DMNEAIQRGSFVEFGRLVGKTWEQNKALDSGTNPPAVEAII 885

Query: 320 QVTRARGLHSKLTGAGGGGCGITLLK 345
            + +   L  KL GAGGGG    + K
Sbjct: 886 DLIKDYTLGYKLPGAGGGGYLYMVAK 911


>3K85-A nrPDB
          Length = 357

 Score = 51.9 bits (122), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 55/353 (15%), Positives = 131/353 (37%), Gaps = 75/353 (21%)

Query: 20  HAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAW-DVARLQSLDTSFLEQG 78
           ++ ++G + L  ++NL  +  ++  ++G+++++  +    +++  +++L+    + L +G
Sbjct: 24  YSDIYGGLILNATINLYAYCTIEETNSGRIEINAYDAQCCKSYLSMSQLEIDGEASLIKG 83

Query: 79  DVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALP-SLDIVVWSEL 137
                                               +Y  I R  R  P S  I  +++ 
Sbjct: 84  ------------------------------------VYNRIIRDYRLEPKSFKITTYNDA 107

Query: 138 PPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQGERMIH 197
           P G+GLG+S+   VC+  A     E +  PL D               ++ A++ ER   
Sbjct: 108 PAGSGLGTSSTMVVCILKA---FIEWLSLPLGD------------YETSRLAYEIERKDL 152

Query: 198 GNPSGV-DNAVSTWGGA--LRYHQGKI---------SSLKRSPALQILLTNTKVPRNTRA 245
           G   G  D   + +GG   + + Q  +           +       ++L  T   R++ A
Sbjct: 153 GLSGGKQDQYAAAFGGFNYMEFLQNDLVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAA 212

Query: 246 LVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHL 305
           ++   +    +  +     +  I   ++       +   A           ++     + 
Sbjct: 213 IINEQKKNTSEGNQTAIEAMHKIKQSAI-------DTKLALLKGDVGEFARILGEGWENK 265

Query: 306 NAL--GVGHASLDQLCQVTRARG-LHSKLTGAGGGGCGITLLKPGLEQPEVEA 355
             +   + +  + +   V    G +  K++GAGGGG  + +++P  ++  V A
Sbjct: 266 KKMAGAITNPMIQEAFDVATGAGAMAGKVSGAGGGGFIMFVVEPTRKEEVVRA 318


>4UT4-A nrPDB
          Length = 346

 Score = 51.9 bits (122), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 49/264 (18%), Positives = 95/264 (35%), Gaps = 47/264 (17%)

Query: 84  TSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDIVVWSELPPGAGL 143
           T +QVEK + ++   +   +   L +   +Y ++          +L++  + + P G+GL
Sbjct: 60  TDQQVEKHQLIS---EPLELNGTLNLHKAVYNHMIRNYNHGKPIALELSTFCDAPAGSGL 116

Query: 144 GSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQGERMIHGNPSG- 202
           GSS+   V +  A     E +  PL D              I + A++ ER+  G   G 
Sbjct: 117 GSSSTLVVVMIKA---FVELLNLPLDDYA------------IAQLAYRIERVDCGLAGGR 161

Query: 203 VDNAVSTWGG---------------ALRYHQGKISSLKRSPALQILLTNTKVPRNTRALV 247
            D   +T+GG                LR     +  L+ S    ++L  T V R +  ++
Sbjct: 162 QDQYSATFGGFNFMEFYAAARTIVNPLRIKNWVLCELEAS----LVLFYTGVSRESAKII 217

Query: 248 AGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLN- 306
               + ++         +  I   +L        M EA     +      + +   +   
Sbjct: 218 QDQSDNVVSHKTAAIEAMHGIKREALV-------MKEALLKGDFKAFVASMRLGWDNKKN 270

Query: 307 -ALGVGHASLDQLCQVTRARGLHS 329
            A  V +A +D++       G  +
Sbjct: 271 SARTVSNAHIDEIYDAAIRAGAQA 294


>3K17-A nrPDB
          Length = 365

 Score = 48.0 bits (112), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 61/337 (18%), Positives = 111/337 (32%), Gaps = 83/337 (24%)

Query: 2   LSEVLLVSAPGKVILHGEHAVVH-GKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKR 60
           L   L V  PGK+ + GE+AVV  G  A+  ++N    L L+     ++ +         
Sbjct: 3   LKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWI--------- 53

Query: 61  AWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSIC 120
                           +  V+ P   +++   E      +        + +         
Sbjct: 54  -------------PHYENPVSWPIGGELKPDGEHWTFTAEAINIATTFLKS--------- 91

Query: 121 RKQRALPSLDIVVWSELPPGA----GLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNR 176
            +   L  + +V+ +EL   +    GLGSSAA +V +  AL+T                 
Sbjct: 92  -EGIELTPVKMVIETELIDQSGAKYGLGSSAAATVAVINALMTKF--------------- 135

Query: 177 WTKEDLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQIL--- 233
           + +  +    K A     ++ GN S  D A   +GG + Y       +K   A + L   
Sbjct: 136 YPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWF 195

Query: 234 ---------------------LTNTKVPRNTRALVAGVRNRLLKFPEIVAPLLTSIDAIS 272
                                +  T  P +T  LV+ +     +  +     LT      
Sbjct: 196 MKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLT------ 249

Query: 273 LECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALG 309
                ++ ++ +A   +   +L   I  N+  L  LG
Sbjct: 250 -RNNEIMKQIIQAFHTKDEELLYSSIKENRRILQELG 285


>4P52-A nrPDB
          Length = 331

 Score = 41.1 bits (94), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 41/280 (14%), Positives = 92/280 (32%), Gaps = 32/280 (11%)

Query: 57  GIKRAWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLY 116
            +   +DV      +        ++     ++  +    G     A    +++    YL 
Sbjct: 37  NVSCGFDVLGFAVDNPGDEVLLRLSDKKGVRITSITGDDGRLPKDAEKNTVSISILRYLE 96

Query: 117 LSICRKQRALPSLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNR 176
                +      ++I +  ++P G+GLGSSAA +V    A+  +                
Sbjct: 97  TLGIEQ-----GIEIELTKKMPLGSGLGSSAASTVAGVYAINQLLGN------------- 138

Query: 177 WTKEDLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTN 236
             K +++ +  +A +GE +  G+    + A   +GG +         + + P +   L  
Sbjct: 139 --KMEVKDLLPFAMEGEFLACGSAHADNVAPCLYGGFVLVRSYDPLDVVKLP-VPANLYA 195

Query: 237 TKVPRNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEE 296
           T +  +        RN L K   +   +    +         +G +          ++  
Sbjct: 196 TIIHPHVEVQTKDARNILPKQIALSQAVAQWGN---------VGGLVAGLLMNDTSLIGR 246

Query: 297 LIDMNQHHLNALGVGHASLDQLCQVTRARG-LHSKLTGAG 335
            +  +     A  V     D + +     G L   ++G+G
Sbjct: 247 SM-QDHIVEPARSVLIPGFDDVKKAALDAGALGCSISGSG 285


>3GON-A nrPDB
          Length = 335

 Score = 36.9 bits (83), Expect = 0.018,   Method: Composition-based stats.
 Identities = 53/348 (15%), Positives = 112/348 (32%), Gaps = 55/348 (15%)

Query: 5   VLLVSAPGKVILHGEHAVVH-GKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRAWD 63
           ++ V   GK+   GE+A++  G++AL   + +     +    + ++   + +  +    +
Sbjct: 1   MIAVKTCGKLYWAGEYAILEPGQLALIKDIPIYMRAEIAFSDSYRIYSDMFDFAVDLRPN 60

Query: 64  VARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQ 123
                 +  +    GD      + +           +    +     +   + L +    
Sbjct: 61  PDY-SLIQETIALMGDFLAVRGQNLRPFSLAIYGKMEREGKKFGLGSSGSVVVLVVKALL 119

Query: 124 RALP-----SLDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWT 178
                    +L   + S +    G   S     C+AA      + +     D   V  W 
Sbjct: 120 ALYNLSVDQNLLFKLTSAVLLKRGDNGSMGDLACIAA-----EDLVLYQSFDRQKVAAWL 174

Query: 179 KEDLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTK 238
           +E+       A   ER               WG ++       S +K +     L+  T 
Sbjct: 175 EEE-----NLATVLERD--------------WGFSI-------SQVKPTLECDFLVGWT- 207

Query: 239 VPRNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECER-VLGEMGEAPAPEQYLVLEEL 297
                          +     +V  +  +I+   L   +  +  + EA    +   + E 
Sbjct: 208 -------------KEVAVSSHMVQQIKQNINQNFLTSSKETVVSLVEALEQGKSEKIIEQ 254

Query: 298 IDMNQHHLNAL--GVGHASLDQLCQVTRARGLHSKLTGAGGGGCGITL 343
           +++    L  L   +    L QL + ++     +K +GAGGG CGI L
Sbjct: 255 VEVASKLLEGLSTDIYTPLLRQLKEASQDLQAVAKSSGAGGGDCGIAL 302


>4RPF-A nrPDB
          Length = 310

 Score = 36.1 bits (81), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 129 LDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTK 179
           + +V+   +P G+GLGSSA   V    A+   C +  + +     +     
Sbjct: 83  VAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVTLLGMMGELEG 133


>3HUL-A nrPDB
          Length = 298

 Score = 34.2 bits (76), Expect = 0.098,   Method: Composition-based stats.
 Identities = 53/286 (18%), Positives = 92/286 (32%), Gaps = 51/286 (17%)

Query: 79  DVTTPTSEQVEKLKEVAGLPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDIVVWSELP 138
           D+         +     G+P D      + +   L L  ++           +V+  ++P
Sbjct: 32  DIGAEADSWYIEHNIGGGIPHD---ETNVIIETALNLAPNLTPHH-------LVMTCDIP 81

Query: 139 PGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQGERMIHG 198
           P  GLGSS+A  V       T+ E               +KE+   I          I G
Sbjct: 82  PARGLGSSSAAVVAGIELANTLAEL------------NLSKEEKVRIA-------AEIEG 122

Query: 199 NPSGVDNAVS---TWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRALVAGVRNRLL 255
           +P  V  AV      G  L      +  L    AL   +   ++  +      GV    L
Sbjct: 123 HPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCALIAFIPKAELLTSESR---GVLPDTL 179

Query: 256 KFPEIVAPLLTSIDAISLECERVLGEMGEAPAPEQYLVLEELIDMNQHHLNALGVGHASL 315
            F E V                +   M  A       +  E+++ +  H          L
Sbjct: 180 PFKEAVQ------------ASSIANVMIAAILRNDMTLAGEMMERDLWHEKYRSQLVPHL 227

Query: 316 DQLCQVTRARGLHSK-LTGAGGGGCGITLLKPGLEQPEVEATKQAL 360
            Q+  V + +G ++  L+GAG     + +  P     +++ + Q L
Sbjct: 228 AQIRDVAKNQGAYAACLSGAGP---TVLVFAPRNLANKLQTSLQTL 270


>2V2V-A nrPDB
          Length = 271

 Score = 33.0 bits (73), Expect = 0.26,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 52/162 (32%), Gaps = 23/162 (14%)

Query: 129 LDIVVWSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKW 188
             I +   +PPGAGLG  ++    +   +  +     +  +  + V   + +        
Sbjct: 82  YSIFIQKNIPPGAGLGGGSSNLAVVLKKVNELLGSPLSEEELRELVGSISAD-------- 133

Query: 189 AFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPALQILLTNTKVPRNTRALVA 248
                      P  +    +   G           ++   + +I L   +V  +T  + +
Sbjct: 134 ----------APFFLLGKSAIGRGKGEVL----EPVETEISGKITLVIPQVSSSTGRVYS 179

Query: 249 GVRNRLLKFPEIVAP-LLTSIDAISLECERVLGEMGEAPAPE 289
            +R      PE     +   I     E E VLG++     PE
Sbjct: 180 SLREEHFVTPEYAEEKIQRIISGEVEEIENVLGDIARELYPE 221


>4JF0-A nrPDB
          Length = 422

 Score = 29.2 bits (63), Expect = 3.7,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 28/79 (35%), Gaps = 6/79 (7%)

Query: 2   LSEVLLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNGKVDLSLPNIGIKRA 61
           +S +L           G H   +G   LA ++   TF  +           L  I  KR 
Sbjct: 278 VSAMLTTQEIASAFHVGSHGSTYGGNPLACAVAGATFDIINTPE------VLQGIHTKRQ 331

Query: 62  WDVARLQSLDTSFLEQGDV 80
             V  LQ++D  F    D+
Sbjct: 332 QFVQHLQAIDEQFDIFSDI 350


>3UY5-A nrPDB
          Length = 428

 Score = 28.4 bits (61), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 327 LHSKLTGAGGGGCGITLLKPGLEQPEVEA 355
            H+   G G GG  + L++P   + E EA
Sbjct: 175 FHADAPGGGLGGSSVRLVRPTEHRGEFEA 203


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.310    0.110    0.255 

Lambda     K      H
   0.267   0.0339    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,615,912
Number of Sequences: 36641
Number of extensions: 427542
Number of successful extensions: 1284
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1153
Number of HSP's gapped (non-prelim): 89
length of query: 396
length of database: 10,336,785
effective HSP length: 99
effective length of query: 297
effective length of database: 6,709,326
effective search space: 1992669822
effective search space used: 1992669822
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 59 (27.6 bits)