BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q03290 (321 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 6GYM-3 nrPDB 654 0.0 6O9M-3 nrPDB 124 7e-29 1G25-A nrPDB 65 4e-11 3ORG-A nrPDB 32 0.44 5OLM-A nrPDB 32 0.48 4KBL-A nrPDB 31 0.80 2CKL-B nrPDB 31 0.90 5UDH-A nrPDB 30 1.0 2ECI-A nrPDB 30 1.1 2ECY-A nrPDB 30 1.9 1FUP-A nrPDB 30 2.0 1Y1U-A nrPDB 30 2.0 2FQ6-A nrPDB 29 2.7 6MZB-A nrPDB 29 3.1 4S3O-B nrPDB 28 3.9 4R8P-L nrPDB 28 3.9 6MBJ-A nrPDB 28 4.3 6ICT-A nrPDB 28 5.8 1M1C-A nrPDB 28 6.4 2JMD-A nrPDB 28 6.5 5UE8-A nrPDB 28 7.3 >6GYM-3 nrPDB Length = 321 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 321/321 (100%), Positives = 321/321 (100%) Query: 1 MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD 60 MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD Sbjct: 1 MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD 60 Query: 61 KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL 120 KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL Sbjct: 61 KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL 120 Query: 121 DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE 180 DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE Sbjct: 121 DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE 180 Query: 181 EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF 240 EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF Sbjct: 181 EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF 240 Query: 241 NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY 300 NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY Sbjct: 241 NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY 300 Query: 301 AYERVLTEAFMGLGCVISEEL 321 AYERVLTEAFMGLGCVISEEL Sbjct: 301 AYERVLTEAFMGLGCVISEEL 321 >6O9M-3 nrPDB Length = 309 Score = 124 bits (310), Expect = 7e-29, Method: Compositional matrix adjust. Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 36/318 (11%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNKFKTQI 72 CP CKT +Y +P +K +VN C H +CESCVD +F G CP C LRK+ F+ Q+ Sbjct: 6 CPRCKTTKYRNPSLKLMVN-VCGHTLCESCVDLLFVRGAGNCPE--CGTPLRKSNFRVQL 62 Query: 73 FDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEK 132 F+D V+KEV+IRK+V ++NK +DF L EYN +LEEVE+I++ L + +D+ T++K Sbjct: 63 FEDPTVDKEVEIRKKVLKIYNKREEDFPS-LREYNDFLEEVEEIVFNLTNNVDLDNTKKK 121 Query: 133 LRTYEELNKQLIMNN---LERSRTEIESFEQRQKFEKEMKLKKRLLERQIEEEERMNKEW 189 + Y++ NK +I N L R + E+E + ++ E E ++RL ++ E+ +++ K Sbjct: 122 MEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENE---QRRLFIQKEEQLQQILKRK 178 Query: 190 TKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYFNSNVNVQNS 249 K+ ++ L ++ + + K+ + + +LE+ V F++ + Sbjct: 179 NKQAFLDELESSDLPVALLLAQHKD----RSTQLEMQLEKPKPV--KPVTFSTGI----- 227 Query: 250 RLKDAVPFTPFNGDREAHPRF-TLKGSVYNDPFIKDLEHRKEF-------------IASG 295 ++ + P + EA + L+ Y P + +LE +A G Sbjct: 228 KMGQHISLAPIHKLEEALYEYQPLQIETYG-PHVPELEMLGRLGYLNHVRAASPQDLAGG 286 Query: 296 FNTNYAYERVLTEAFMGL 313 + ++ A R L +AF GL Sbjct: 287 YTSSLACHRALQDAFSGL 304 >1G25-A nrPDB Length = 65 Score = 65.1 bits (157), Expect = 4e-11, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNKFKTQI 72 CP CKT +Y +P +K +VN C H +CESCVD +F G CP C LRK+ F+ Q+ Sbjct: 6 CPRCKTTKYRNPSLKLMVNV-CGHTLCESCVDLLFVRGAGNCPE--CGTPLRKSNFRVQL 62 Query: 73 FDD 75 F+D Sbjct: 63 FED 65 >3ORG-A nrPDB Length = 632 Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 169 KLKKRLLERQIEEEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLE 228 K RL+ I+ + ++KEIV+RL +D+ E I G + V L + +E Sbjct: 483 KFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIE 542 Query: 229 EL 230 L Sbjct: 543 GL 544 >5OLM-A nrPDB Length = 132 Score = 31.6 bits (70), Expect = 0.48, Method: Compositional matrix adjust. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 CPIC D ++ P V+ EC H C+ C+ ++ G + CP Sbjct: 19 CPIC-LDPFVEP-----VSIECGHSFCQECISQVGKGGGSVCP 55 >4KBL-A nrPDB Length = 559 Score = 30.8 bits (68), Expect = 0.80, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 13/81 (16%) Query: 3 MDEYEENKDM-CPICKTDRYLSPDVKFLVNPECYHRICESC-----VDRIFSLGPAQ--- 53 M+ +DM C IC YL+ + EC H+ C C +I G Q Sbjct: 177 MNTRSSAQDMPCQIC----YLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTIS 232 Query: 54 CPYKGCDKILRKNKFKTQIFD 74 CP GCD ++ N I D Sbjct: 233 CPAHGCDILVDDNTVMRLITD 253 >2CKL-B nrPDB Length = 165 Score = 30.8 bits (68), Expect = 0.90, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Query: 12 MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 MCPIC L + EC HR C C+ G +CP Sbjct: 56 MCPIC-----LDMLKNTMTTKECLHRFCADCIITALRSGNKECP 94 >5UDH-A nrPDB Length = 470 Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust. Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 13/81 (16%) Query: 3 MDEYEENKDM-CPICKTDRYLSPDVKFLVNPECYHRICESC-----VDRIFSLGPAQ--- 53 M+ +DM C IC YL+ + EC H+ C C +I G Q Sbjct: 88 MNTRSSAQDMPCQIC----YLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTIS 143 Query: 54 CPYKGCDKILRKNKFKTQIFD 74 CP GCD ++ N I D Sbjct: 144 CPAHGCDILVDDNTVMRLITD 164 >2ECI-A nrPDB Length = 86 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 12/75 (16%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNK 67 E+K CPIC ++ V C HR C++C+ + +CP ++IL +N Sbjct: 23 ESKYECPICLMA------LREAVQTPCGHRFCKACIIKSIRDAGHKCPVD--NEILLEN- 73 Query: 68 FKTQIFDDVEVEKEV 82 Q+F D ++E+ Sbjct: 74 ---QLFPDNFAKREI 85 >2ECY-A nrPDB Length = 66 Score = 29.6 bits (65), Expect = 1.9, Method: Composition-based stats. Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%) Query: 33 ECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNK 67 EC HR CESC+ + S +C C + + K+K Sbjct: 32 ECGHRFCESCMAALLSSSSPKC--TACQESIVKDK 64 >1FUP-A nrPDB Length = 472 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 33/147 (22%), Positives = 60/147 (40%), Gaps = 15/147 (10%) Query: 173 RLLERQIEEEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNR 232 R +ER++ + +NK S ++ D+ T V + L+K +L+ L + Sbjct: 122 RGMERKVHPNDDVNK-----------SQSSNDVFPTAMHVAALLALRKQLIP-QLKTLTQ 169 Query: 233 VL-KNNPYFNSNVNVQNSRLKDAVPFTPFN--GDREAHPRFTLKGSVYNDPFIKDLEHRK 289 L + + F V + + L+DA P T A LK Y+ P + +L Sbjct: 170 TLNEKSRAFADIVKIGRTHLQDATPLTLGQEISGWVAMLEHNLKHIEYSLPHVAELALGG 229 Query: 290 EFIASGFNTNYAYERVLTEAFMGLGCV 316 + +G NT+ Y R + + + C Sbjct: 230 TAVGTGLNTHPEYARRVADELAVITCA 256 >1Y1U-A nrPDB Length = 585 Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust. Identities = 23/100 (23%), Positives = 49/100 (49%), Gaps = 11/100 (11%) Query: 20 RYLSPDVKFLVNPECYHRICESCV-DRIFSLGPAQCPYKGCDKILRKN-------KFKTQ 71 + LS V +V+ H + + D F+ P + P+ DK+L KFK + Sbjct: 333 KTLSLPVVVIVHGSQDHNATATVLWDNAFA-EPGRVPFAVPDKVLWPQLCEALNMKFKAE 391 Query: 72 IFDDVEVEKE--VDIRKRVFNVFNKTIDDFNGDLVEYNKY 109 + + + KE V + +++FN+ + ++D+N V ++++ Sbjct: 392 VQSNRGLTKENLVFLAQKLFNISSNHLEDYNSMSVSWSQF 431 >2FQ6-A nrPDB Length = 415 Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust. Identities = 12/26 (46%), Positives = 18/26 (69%) Query: 98 DFNGDLVEYNKYLEEVEDIIYKLDHG 123 DF+G L+ + LE+V+D+I LD G Sbjct: 385 DFSGTLIRLHIGLEDVDDLIADLDAG 410 >6MZB-A nrPDB Length = 859 Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust. Identities = 33/129 (25%), Positives = 65/129 (50%), Gaps = 13/129 (10%) Query: 122 HGIDVAKT---EEKLRTYEELNKQ-----LIMNNLERSRTEIE-SFEQRQKFEKEMKLKK 172 H ++ KT +E L ++ LN++ + M ++ T++ F++R F+K + + Sbjct: 630 HHLEFGKTLLRDESLNIFQNLNRRQHEHAIHMMDIAIIATDLALYFKKRTMFQKIVD-QS 688 Query: 173 RLLERQIEEEERMNKEWTKKEIVNRLSTTTQDINETIEG--VKNTVKLKKSSARRKLEEL 230 + E Q E + M + T+KEIV + T D++ + V++ V L ++ + +L Sbjct: 689 KTYETQQEWTQYMMLDQTRKEIVMAMMMTACDLSAITKPWEVQSKVALLVAAEFWEQGDL 748 Query: 231 NR-VLKNNP 238 R VL+ NP Sbjct: 749 ERTVLQQNP 757 >4S3O-B nrPDB Length = 118 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Query: 12 MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 MCPIC L + EC HR C C+ G +CP Sbjct: 52 MCPIC-----LDMLKNTMTTKECLHRFCADCIITALRSGNKECP 90 >4R8P-L nrPDB Length = 268 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 5/44 (11%) Query: 12 MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 MCPIC L + EC HR C C+ G +CP Sbjct: 50 MCPIC-----LDMLKNTMTTKECLHRFCADCIITALRSGNKECP 88 >6MBJ-A nrPDB Length = 599 Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 11/64 (17%) Query: 36 HRICESCVDRIFSLGPAQCPYKGCDKI-----------LRKNKFKTQIFDDVEVEKEVDI 84 H + +S +DRIF+LG ++ P +++ L +KT I +D V K D+ Sbjct: 403 HLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDL 462 Query: 85 RKRV 88 R Sbjct: 463 SVRA 466 >6ICT-A nrPDB Length = 504 Score = 28.1 bits (61), Expect = 5.8, Method: Compositional matrix adjust. Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 11/64 (17%) Query: 36 HRICESCVDRIFSLGPAQCPYKGCDKI-----------LRKNKFKTQIFDDVEVEKEVDI 84 H + +S +DRIF+LG ++ P +++ L +KT I +D V K D+ Sbjct: 399 HLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTTIEEDKSVLKNHDL 458 Query: 85 RKRV 88 R Sbjct: 459 SVRA 462 >1M1C-A nrPDB Length = 680 Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust. Identities = 22/99 (22%), Positives = 43/99 (43%), Gaps = 3/99 (3%) Query: 197 RLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYFNSNVNVQNSRLKDAVP 256 R + T QD +E IEG + + + S++ L L + + +N +N ++L + Sbjct: 243 RHALTVQDADEWIEGDRTDDQFRPPSSKVMLSALRKYVNHNRLYNQFYTA--AQLLAQIM 300 Query: 257 FTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASG 295 P E + + + ++ N P + R F+ SG Sbjct: 301 MKPVPNCAEGY-AWLMHDALVNIPKFGSIRGRYPFLLSG 338 >2JMD-A nrPDB Length = 63 Score = 27.7 bits (60), Expect = 6.5, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 12/67 (17%) Query: 9 NKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNKF 68 +K CPIC ++ V C HR C++C+ + +CP ++IL +N Sbjct: 5 SKYECPICLMA------LREAVQTPCGHRFCKACIIKSIRDAGHKCPVD--NEILLEN-- 54 Query: 69 KTQIFDD 75 Q+F D Sbjct: 55 --QLFPD 59 >5UE8-A nrPDB Length = 961 Score = 27.7 bits (60), Expect = 7.3, Method: Compositional matrix adjust. Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 5/71 (7%) Query: 66 NKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGID 125 ++ K +++D+ + DI+ RV F + DDF G + + L D+ Y LD D Sbjct: 221 DRIKVRVWDEDD-----DIKSRVKQRFKRESDDFLGQTIIEVRTLSGEMDVWYNLDKRTD 275 Query: 126 VAKTEEKLRTY 136 + +R + Sbjct: 276 KSAVSGAIRLH 286 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 6GYM-3 nrPDB 484 e-137 6O9M-3 nrPDB 372 e-103 1G25-A nrPDB 117 6e-27 Sequences not found previously or not previously below threshold: 5OLM-A nrPDB 36 0.023 3KNV-A nrPDB 34 0.11 2ECI-A nrPDB 33 0.14 6G18-v nrPDB 33 0.21 4R8P-L nrPDB 33 0.21 5VO0-A nrPDB 32 0.26 5UDH-A nrPDB 32 0.30 4KBL-A nrPDB 32 0.32 3HCS-A nrPDB 32 0.43 5VNZ-A nrPDB 32 0.43 4TXA-A nrPDB 32 0.44 3HCT-A nrPDB 32 0.52 4S3O-B nrPDB 31 0.60 2ECY-A nrPDB 31 0.71 4Z8X-A nrPDB 31 0.79 2JMD-A nrPDB 31 0.81 6FKI-E nrPDB 31 0.89 3ORG-A nrPDB 31 0.91 2CKL-B nrPDB 30 1.1 2DI4-A nrPDB 30 1.1 4RTB-A nrPDB 30 1.1 5OBV-A nrPDB 30 1.2 2ECW-A nrPDB 30 1.3 6ABV-A nrPDB 30 1.5 5LJ5-S nrPDB 30 1.8 6C26-B nrPDB 30 1.8 6NTW-A nrPDB 29 2.3 5MU7-B nrPDB 29 2.9 4KV9-A nrPDB 29 3.1 5TRB-A nrPDB 29 3.9 5A1W-H nrPDB 29 4.5 2WN7-A nrPDB 28 4.7 1S94-A nrPDB 28 5.2 1S4K-A nrPDB 28 5.2 3OBV-E nrPDB 28 5.9 1U5P-A nrPDB 28 6.1 4D1J-A nrPDB 28 6.1 5WTZ-A nrPDB 28 6.6 6B1P-A nrPDB 28 6.7 2NO2-A nrPDB 28 7.6 5UQM-A nrPDB 27 8.5 CONVERGED! >6GYM-3 nrPDB Length = 321 Score = 484 bits (1246), Expect = e-137, Method: Composition-based stats. Identities = 321/321 (100%), Positives = 321/321 (100%) Query: 1 MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD 60 MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD Sbjct: 1 MLMDEYEENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCD 60 Query: 61 KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL 120 KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL Sbjct: 61 KILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKL 120 Query: 121 DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE 180 DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE Sbjct: 121 DHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIE 180 Query: 181 EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF 240 EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF Sbjct: 181 EEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF 240 Query: 241 NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY 300 NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY Sbjct: 241 NSNVNVQNSRLKDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNY 300 Query: 301 AYERVLTEAFMGLGCVISEEL 321 AYERVLTEAFMGLGCVISEEL Sbjct: 301 AYERVLTEAFMGLGCVISEEL 321 >6O9M-3 nrPDB Length = 309 Score = 372 bits (955), Expect = e-103, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 165/318 (51%), Gaps = 36/318 (11%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNKFKTQI 72 CP CKT +Y +P +K +VN C H +CESCVD +F G CP C LRK+ F+ Q+ Sbjct: 6 CPRCKTTKYRNPSLKLMVNV-CGHTLCESCVDLLFVRGAGNCPE--CGTPLRKSNFRVQL 62 Query: 73 FDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEK 132 F+D V+KEV+IRK+V ++NK +DF L EYN +LEEVE+I++ L + +D+ T++K Sbjct: 63 FEDPTVDKEVEIRKKVLKIYNKREEDFPS-LREYNDFLEEVEEIVFNLTNNVDLDNTKKK 121 Query: 133 LRTYEELNKQLIMNN---LERSRTEIESFEQRQKFEKEMKLKKRLLERQIEEEERMNKEW 189 + Y++ NK +I N L R + E+E + ++ E E ++RL ++ E+ +++ K Sbjct: 122 MEIYQKENKDVIQKNKLKLTREQEELEEALEVERQENE---QRRLFIQKEEQLQQILKRK 178 Query: 190 TKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYFNSNVNVQNS 249 K+ ++ L ++ + + K+ + + +LE+ V F++ + Sbjct: 179 NKQAFLDELESSDLPVALLLAQHKD----RSTQLEMQLEKPKPV--KPVTFSTGI----- 227 Query: 250 RLKDAVPFTPFNGDREAHPRF-TLKGSVYNDPFIKDLEHRKEF-------------IASG 295 ++ + P + EA + L+ Y P + +LE +A G Sbjct: 228 KMGQHISLAPIHKLEEALYEYQPLQIETYG-PHVPELEMLGRLGYLNHVRAASPQDLAGG 286 Query: 296 FNTNYAYERVLTEAFMGL 313 + ++ A R L +AF GL Sbjct: 287 YTSSLACHRALQDAFSGL 304 >1G25-A nrPDB Length = 65 Score = 117 bits (293), Expect = 6e-27, Method: Composition-based stats. Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNKFKTQI 72 CP CKT +Y +P +K +VN C H +CESCVD +F G CP C LRK+ F+ Q+ Sbjct: 6 CPRCKTTKYRNPSLKLMVNV-CGHTLCESCVDLLFVRGAGNCPE--CGTPLRKSNFRVQL 62 Query: 73 FDD 75 F+D Sbjct: 63 FED 65 >5OLM-A nrPDB Length = 132 Score = 35.8 bits (81), Expect = 0.023, Method: Composition-based stats. Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 6/43 (13%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 CPIC D ++ P V+ EC H C+ C+ ++ G + CP Sbjct: 19 CPIC-LDPFVEP-----VSIECGHSFCQECISQVGKGGGSVCP 55 >3KNV-A nrPDB Length = 141 Score = 33.9 bits (76), Expect = 0.11, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 6/47 (12%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQC 54 E K +C C+ ++ +C HR C C+ I S GP C Sbjct: 29 EAKYLCSACRNV------LRRPFQAQCGHRYCSFCLASILSSGPQNC 69 >2ECI-A nrPDB Length = 86 Score = 33.1 bits (74), Expect = 0.14, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 12/75 (16%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNK 67 E+K CPIC ++ V C HR C++C+ + +CP ++IL +N Sbjct: 23 ESKYECPICLM------ALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD--NEILLEN- 73 Query: 68 FKTQIFDDVEVEKEV 82 Q+F D ++E+ Sbjct: 74 ---QLFPDNFAKREI 85 >6G18-v nrPDB Length = 552 Score = 32.8 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 69/182 (37%), Gaps = 20/182 (10%) Query: 53 QCPYKGCDKILRKNKFKTQIFDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEE 112 C + R + QI +D E+ D R + ++ E+N+ LEE Sbjct: 357 NCLEESEGCYCRSSGDPEQIKEDSLSEESADAR--------------SFEMTEFNQALEE 402 Query: 113 VEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKK 172 ++ + + + + ++ + + Y + Q + + E E + + Sbjct: 403 IKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREF 462 Query: 173 RLLERQIEEEERMNKEWTKKEIV----NRLSTTTQDINETIEGVK-NTVKLKKSSARRKL 227 R R E MN+ T+ + + +S +T + VK K +KS+ RR+L Sbjct: 463 RPF-RDEENVGAMNQYRTRTLSITSSGSAVSCSTIPPELVKQKVKRQLTKQQKSAVRRRL 521 Query: 228 EE 229 ++ Sbjct: 522 QK 523 >4R8P-L nrPDB Length = 268 Score = 32.8 bits (73), Expect = 0.21, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 12 MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 MCPIC D + + EC HR C C+ G +CP Sbjct: 50 MCPIC-LDMLKNT----MTTKECLHRFCADCIITALRSGNKECP 88 >5VO0-A nrPDB Length = 172 Score = 32.4 bits (72), Expect = 0.26, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 E+K CPIC ++ V C HR C+SC+ + +CP Sbjct: 17 ESKYECPICLM------GLRSAVQTPCGHRFCDSCIRKSIRDTGQKCP 58 >5UDH-A nrPDB Length = 470 Score = 32.4 bits (72), Expect = 0.30, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 14/86 (16%) Query: 3 MDEYEENKDM-CPICKTDRYLSPDVKFLVNPECYHRICESC-----VDRIFSLGPAQ--- 53 M+ +DM C IC YL+ + EC H+ C C +I G Q Sbjct: 88 MNTRSSAQDMPCQIC----YLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTIS 143 Query: 54 CPYKGCDKILRKNKFKTQIFDDVEVE 79 CP GCD IL + ++ D +V+ Sbjct: 144 CPAHGCD-ILVDDNTVMRLITDSKVK 168 >4KBL-A nrPDB Length = 559 Score = 32.0 bits (71), Expect = 0.32, Method: Composition-based stats. Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 14/86 (16%) Query: 3 MDEYEENKDM-CPICKTDRYLSPDVKFLVNPECYHRICESC-----VDRIFSLGPAQ--- 53 M+ +DM C IC YL+ + EC H+ C C +I G Q Sbjct: 177 MNTRSSAQDMPCQIC----YLNYPNSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTIS 232 Query: 54 CPYKGCDKILRKNKFKTQIFDDVEVE 79 CP GCD IL + ++ D +V+ Sbjct: 233 CPAHGCD-ILVDDNTVMRLITDSKVK 257 >3HCS-A nrPDB Length = 170 Score = 31.6 bits (70), Expect = 0.43, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 12/75 (16%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNK 67 E+K CPIC ++ V C HR C++C+ + +CP ++IL +N Sbjct: 16 ESKYECPICLM------ALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD--NEILLEN- 66 Query: 68 FKTQIFDDVEVEKEV 82 Q+F D ++E+ Sbjct: 67 ---QLFPDNFAKREI 78 >5VNZ-A nrPDB Length = 118 Score = 31.6 bits (70), Expect = 0.43, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 6/48 (12%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 E+K CPIC ++ V C HR C+SC+ + +CP Sbjct: 17 ESKYECPICLM------GLRSAVQTPCGHRFCDSCIRKSIRDTGQKCP 58 >4TXA-A nrPDB Length = 484 Score = 31.6 bits (70), Expect = 0.44, Method: Composition-based stats. Identities = 10/44 (22%), Positives = 22/44 (50%), Gaps = 5/44 (11%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPY 56 CPIC + ++ ++ C H +C+ C++++ CP+ Sbjct: 14 CPIC--TQTFDETIRKPISLGCGHTVCKMCLNKLHRKA---CPF 52 >3HCT-A nrPDB Length = 118 Score = 31.6 bits (70), Expect = 0.52, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 12/75 (16%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNK 67 E+K CPIC ++ V C HR C++C+ + +CP ++IL +N Sbjct: 16 ESKYECPICLM------ALREAVQTPCGHRFCKACIIKSIRDAGHKCPVD--NEILLEN- 66 Query: 68 FKTQIFDDVEVEKEV 82 Q+F D ++E+ Sbjct: 67 ---QLFPDNFAKREI 78 >4S3O-B nrPDB Length = 118 Score = 31.2 bits (69), Expect = 0.60, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 12 MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 MCPIC D + + EC HR C C+ G +CP Sbjct: 52 MCPIC-LDMLKNT----MTTKECLHRFCADCIITALRSGNKECP 90 >2ECY-A nrPDB Length = 66 Score = 30.8 bits (68), Expect = 0.71, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 8/60 (13%) Query: 8 ENKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKGCDKILRKNK 67 E+K C C SP EC HR CESC+ + S +C C + + K+K Sbjct: 13 EDKYKCEKCHLV-LCSPK-----QTECGHRFCESCMAALLSSSSPKC--TACQESIVKDK 64 >4Z8X-A nrPDB Length = 497 Score = 30.8 bits (68), Expect = 0.79, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 14/106 (13%) Query: 96 IDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEI 155 +D L E + EEV II + K + + Y+E K ++ LE+ Sbjct: 400 VDTSPDLLREID---EEVRRIITE-----QYEKAKAIVEEYKEPLKAVVKKLLEKETITC 451 Query: 156 ESFEQRQK----FEKEMKLKKRLL--ERQIEEEERMNKEWTKKEIV 195 E F + K K+ K+ L +R+ EE + + K+E+V Sbjct: 452 EEFVEVFKLYGIELKDKCKKEELFDKDRKSEENKELKSGEVKEEVV 497 >2JMD-A nrPDB Length = 63 Score = 30.8 bits (68), Expect = 0.81, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 6/47 (12%) Query: 9 NKDMCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 +K CPIC ++ V C HR C++C+ + +CP Sbjct: 5 SKYECPICLM------ALREAVQTPCGHRFCKACIIKSIRDAGHKCP 45 >6FKI-E nrPDB Length = 507 Score = 30.8 bits (68), Expect = 0.89, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 7/76 (9%) Query: 110 LEEVEDIIYKLDHG----IDVAKTEE---KLRTYEELNKQLIMNNLERSRTEIESFEQRQ 162 +EE IY +G +++ + + +LRTY + NK + ++T E E Sbjct: 431 VEEQVMTIYTGTNGYLDSLELDQVRKYLVELRTYVKTNKPEFQEIISSTKTFTEEAEALL 490 Query: 163 KFEKEMKLKKRLLERQ 178 K + ++++ LL+ Q Sbjct: 491 KEAIQEQMERFLLQEQ 506 >3ORG-A nrPDB Length = 632 Score = 30.8 bits (68), Expect = 0.91, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 29/62 (46%) Query: 169 KLKKRLLERQIEEEERMNKEWTKKEIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLE 228 K RL+ I+ + ++KEIV+RL +D+ E I G + V L + +E Sbjct: 483 KFPNRLVFPVIDANGYLLGAISRKEIVDRLQHVLEDVPEPIAGHRTLVLLDAADLSENIE 542 Query: 229 EL 230 L Sbjct: 543 GL 544 >2CKL-B nrPDB Length = 165 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 15/44 (34%), Positives = 19/44 (43%), Gaps = 5/44 (11%) Query: 12 MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCP 55 MCPIC D + + EC HR C C+ G +CP Sbjct: 56 MCPIC-LDMLKNT----MTTKECLHRFCADCIITALRSGNKECP 94 >2DI4-A nrPDB Length = 238 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 14/106 (13%) Query: 96 IDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEI 155 +D L E + EEV+ II + K + + Y+E K ++ LE+ Sbjct: 141 VDTSPDLLREID---EEVKRIITE-----QYEKAKAIVEEYKEPLKAVVKKLLEKETITC 192 Query: 156 ESFEQRQK----FEKEMKLKKRLL--ERQIEEEERMNKEWTKKEIV 195 E F + K K+ K+ L +R+ EE + + E K+E+V Sbjct: 193 EEFVEVFKLYGIELKDKCKKEELFDKDRKSEENKELKSEEVKEEVV 238 >4RTB-A nrPDB Length = 477 Score = 30.4 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 43/112 (38%), Gaps = 10/112 (8%) Query: 135 TYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIEEEERMNK--EWTKK 192 ++ NK+ L R R +E K +EM + LL E E++ E Sbjct: 116 SFRRENKE-----LSRVRLSLEEAVDEAKAIREMGHTRILLVMGEEPEDKTLSYLEEIIP 170 Query: 193 EIVNRLSTTTQDIN---ETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYFN 241 I + + ++N T++G + KLK + + E N + + + Sbjct: 171 AIYSEVDIRRINVNIAPLTLKGYERLKKLKIGTYQLFQESYNPEVYREVHLD 222 >5OBV-A nrPDB Length = 529 Score = 30.1 bits (66), Expect = 1.2, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 59/139 (42%), Gaps = 15/139 (10%) Query: 58 GCDKILRKNKF-----KTQIFDDVEVEKE-VDI----RKRVFNVFNKTIDDFN-GDLVEY 106 G L K K+QIF + +E VD+ +R + NK++ FN G + Sbjct: 387 GVATPLIKRNTTIPVSKSQIFSTAQDNQESVDVVVCQGERPMSRDNKSLGRFNLGGIQPA 446 Query: 107 NKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQ--RQKF 164 K ++E I + LD + + K T ++ N I +N S EI+ + Sbjct: 447 PKGKPQIE-ITFSLDAN-GILNVKAKDLTTQKENSITISDNGNLSEEEIQKMIRDAEANK 504 Query: 165 EKEMKLKKRLLERQIEEEE 183 E++ +++R+ R E E Sbjct: 505 ERDNIIRERIELRNEGELE 523 >2ECW-A nrPDB Length = 85 Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 23/65 (35%), Gaps = 13/65 (20%) Query: 13 CPICKTDRYLSPDVKFLVNPECYHRICESCVDRIF-----SLGPAQCPYKGCDKILRKNK 67 CPIC +K V+ +C H C +C+ + + G CP C Sbjct: 22 CPICLEL------LKEPVSADCNHSFCRACITLNYESNRNTDGKGNCP--VCRVPYPFGN 73 Query: 68 FKTQI 72 K + Sbjct: 74 LKPNL 78 >6ABV-A nrPDB Length = 389 Score = 30.1 bits (66), Expect = 1.5, Method: Composition-based stats. Identities = 11/39 (28%), Positives = 22/39 (56%) Query: 78 VEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDI 116 V K D R ++F + K I + N D +Y + +++E++ Sbjct: 271 VYKTYDPRAKIFKKYAKVISERNSDARKYFEIAQKLEEL 309 >5LJ5-S nrPDB Length = 687 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 27/168 (16%), Positives = 63/168 (37%), Gaps = 14/168 (8%) Query: 78 VEKEVDIRK--RVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRT 135 +E EV +++ RV ++ K I+ DL +++Y E E++ D + Sbjct: 444 IELEVKLKEFDRVRKIYEKFIEFQPSDLQIWSQYGELEENL-------GDWDRVRGIYTI 496 Query: 136 YEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIEEEERMNKEWTKKEIV 195 + N + E ++ + + +E + ++L R +E + + W + + Sbjct: 497 ALDENSDFLTK--EAKIVLLQKYITFETESQEFEKARKLYRRYLELNQYSPQSWIEFAMY 554 Query: 196 NRLSTTTQ---DINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYF 240 + T Q D+ + + + + KLE + +F Sbjct: 555 QTSTPTEQQLLDLAKLQSENVDEDIEFEITDENKLEARKVFEEAIVFF 602 >6C26-B nrPDB Length = 430 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 5/55 (9%) Query: 87 RVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNK 141 R +++++ + L EY+ YL+++E YKL++ +D+ T + Y++ + Sbjct: 25 RTLVLYDQSTE----PLEEYSVYLKDLEQRNYKLEY-LDINSTSTTVDLYDKEQR 74 >6NTW-A nrPDB Length = 585 Score = 29.3 bits (64), Expect = 2.3, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 35/106 (33%), Gaps = 6/106 (5%) Query: 208 TIEGVKNTVKLKKSSARRKLEELNRVLKNNPYFNSNVNVQNSRLKDAVPFTPFNGDREAH 267 + G++ + AR ++E Y N Q L A P +R+A Sbjct: 29 IMAGIQPLPEGAAEKARTQIESQLPAGYKPVYLN-----QLQLLYAARDMQPMWENRDAV 83 Query: 268 PRFTLKG-SVYNDPFIKDLEHRKEFIASGFNTNYAYERVLTEAFMG 312 F + V F E + A + VL++A MG Sbjct: 84 KAFQQQLAEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMG 129 >5MU7-B nrPDB Length = 175 Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 14/64 (21%), Positives = 40/64 (62%), Gaps = 5/64 (7%) Query: 110 LEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMK 169 +E+ ++ Y+ + I+ KT ++ ++EE +++I N E+E+ E+R++ K+++ Sbjct: 113 FDEIINLGYRENLTINQIKTFLEMESHEERIQEIIARN-----KELEATEERKRKAKQLE 167 Query: 170 LKKR 173 ++++ Sbjct: 168 MQRK 171 >4KV9-A nrPDB Length = 412 Score = 28.9 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Query: 156 ESFEQRQKFEKEMKLKKRLLERQIEEEERMN--KEWTKKEIVNRLSTTTQDINETIEGVK 213 E ++ +EK +L+++ L+++ EE +M + K++++ Q E+++ Sbjct: 311 EKMSLQETYEKRRELQRKELQQKEEEMRQMFVQRVKEKEQVLKEAERELQTKFESLKKTH 370 Query: 214 NTVKLKKSSARRKLEE 229 K K +R LEE Sbjct: 371 AEEKKKLEEKKRFLEE 386 >5TRB-A nrPDB Length = 75 Score = 28.5 bits (62), Expect = 3.9, Method: Composition-based stats. Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 10/70 (14%) Query: 1 MLMDEYEENKD--MCPICKTDRYLSPDVKFLVNPECYHRICESCVDRIFSLGPAQCPYKG 58 +LM+E ++ K CP C + K V +C+H C CV + +CP Sbjct: 8 ILMEEIKDYKARLTCPCCNMRK------KDAVLTKCFHVFCFECVKTRYDTRQRKCPK-- 59 Query: 59 CDKILRKNKF 68 C+ N F Sbjct: 60 CNAAFGANDF 69 >5A1W-H nrPDB Length = 511 Score = 28.5 bits (62), Expect = 4.5, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 19/113 (16%) Query: 87 RVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMN 146 +F++ I ++ L E N+ E D+I+ D + + N L Sbjct: 81 ETLRLFSRVIPEYCRALEE-NEISEHCFDLIFAFDEIVALG---------YRENVNLAQ- 129 Query: 147 NLERSRTEIESFEQ------RQKFEKEMKLKKRLLERQIEEEERMNKEWTKKE 193 R+ TE++S E+ R+ E+E K + R +++++ R + KK Sbjct: 130 --IRTFTEMDSHEEKVFRAVRETQEREAKAEMRRKAKELQQARRDAERQGKKA 180 >2WN7-A nrPDB Length = 463 Score = 28.1 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 25/102 (24%), Positives = 42/102 (41%), Gaps = 3/102 (2%) Query: 105 EYNKYLEEVEDIIYK--LDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTEIESFEQRQ 162 + Y E+V + YK ++ D K +EK + +E + I LERS E ++ Sbjct: 36 DLQSYSEKVCNTTYKAPIERPEDFLKDKEKAKEWERKEAERIEQKLERSEKEALESYKKD 95 Query: 163 KFEKEMKLKKRLLERQIEEEERMNKEWTKKEIVNRLSTTTQD 204 E + R + E ++E KE+ N +S D Sbjct: 96 SVEISKYSQTRNYFY-DYQIEANSREKEYKELRNAISKNKID 136 >1S94-A nrPDB Length = 180 Score = 28.1 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 6/93 (6%) Query: 95 TIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQLIMNNLERSRTE 154 +D G + E+ + +EE+ +I K+ +D K + + LE T+ Sbjct: 30 QVDSGGGFMEEFFEQVEEIRAMIDKISDNVDAVKKKHSDILSAPQTDDQMKEELEELMTD 89 Query: 155 IESFEQRQKFEKEMKLKKRLLERQIEEEERMNK 187 I ++ +++ K + +E IE+EE NK Sbjct: 90 I------KRTANKVRGKLKTIELNIEQEEHSNK 116 >1S4K-A nrPDB Length = 120 Score = 28.1 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 167 EMKLKKRLLERQIEEEERMNKEWTKKEIVNRLSTTTQDIN-ETIEGVKNTVKLKKSSARR 225 E++ +R+ + IEE + R I+ E I +K ++ Sbjct: 7 ELQALRRIFDMTIEECTIYITQDNNSATWQRWEAGDIPISPEIIARLKEMKARRQRRINA 66 Query: 226 KLEELNRVLKNN 237 ++++N + NN Sbjct: 67 IVDKINNRIGNN 78 >3OBV-E nrPDB Length = 457 Score = 28.1 bits (61), Expect = 5.9, Method: Composition-based stats. Identities = 21/171 (12%), Positives = 71/171 (41%), Gaps = 21/171 (12%) Query: 78 VEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGID-VAKTEEKLRTY 136 ++K +D K+ + + +F E +K++E++ + + + + T Sbjct: 286 LQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMTSFVKDAQEQYNKLRMMHSNMETL 345 Query: 137 EELNKQLIMNNLERSRTEIESF----------------EQRQKFEKEMKLKKRLLERQIE 180 + + + + +E F E +++ E E K+++ L ++ Sbjct: 346 YKELGDYFV--FDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRAKLAKEKA 403 Query: 181 EEERMNKEWTKKEIVNRLSTTTQD--INETIEGVKNTVKLKKSSARRKLEE 229 E+ER+ K+ ++++++ + + ++ +E +++ ++ R++ Sbjct: 404 EKERLEKQQKREQLIDMNAEGDETGVMDSLLEALQSGAAFRRKRGPRQVNR 454 >1U5P-A nrPDB Length = 216 Score = 27.7 bits (60), Expect = 6.1, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 26/49 (53%) Query: 95 TIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEKLRTYEELNKQL 143 +FN + +++ +L EVE ++ D+G D+A L+ ++ L + Sbjct: 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADI 52 >4D1J-A nrPDB Length = 540 Score = 27.7 bits (60), Expect = 6.1, Method: Composition-based stats. Identities = 11/41 (26%), Positives = 17/41 (41%) Query: 252 KDAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFI 292 K + F+PF D + + L VYND I+ + Sbjct: 331 KGGIGFSPFGMDDTDYTNYPLGAKVYNDETIEQFAQVYRLV 371 >5WTZ-A nrPDB Length = 421 Score = 27.7 bits (60), Expect = 6.6, Method: Composition-based stats. Identities = 15/66 (22%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Query: 124 IDVAKTEEKLRTYEELNKQLIMNNLER-SRTEIESFEQRQKFEKEMKLKKRLLERQIEEE 182 +D AK + + + KQ+ +NNL + T I ++ + +KK+ E Sbjct: 10 MDFAKDKNSATLWAKKRKQVWLNNLSKAESTSINNYIKNSSEINSYSIKKKFALDNYEGI 69 Query: 183 ERMNKE 188 E +N++ Sbjct: 70 ETLNED 75 >6B1P-A nrPDB Length = 471 Score = 27.7 bits (60), Expect = 6.7, Method: Composition-based stats. Identities = 20/84 (23%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 100 NGDLVEYNKYLEEVEDIIYKLDHGID---VAKTEEKLRTYEELNKQLIMNNLERSRTEIE 156 L L+E + +L ID +A E + + +++LN+ LIM LE+ + E++ Sbjct: 345 PAQLDRLLDALKERSQTLKELALKIDEVLIAPVEYEEKVFKKLNQALIMPLLEKFKLELK 404 Query: 157 SFEQRQKFEKEMKLKKRLLERQIE 180 + E + K + E +I+ Sbjct: 405 EANFNDESALENAMHKIIEEEKIK 428 >2NO2-A nrPDB Length = 107 Score = 27.7 bits (60), Expect = 7.6, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 31/77 (40%) Query: 145 MNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIEEEERMNKEWTKKEIVNRLSTTTQD 204 +LER + E+E +R + + K +++L + ++E + + + L T+ Q Sbjct: 24 QVDLEREKKELEDSLERISDQGQRKTQEQLEVLESLKQELATSQRELQVLQGSLETSAQS 83 Query: 205 INETIEGVKNTVKLKKS 221 K + S Sbjct: 84 EANWAAEFAELEKERDS 100 >5UQM-A nrPDB Length = 563 Score = 27.4 bits (59), Expect = 8.5, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 76/242 (31%), Gaps = 38/242 (15%) Query: 73 FDDVEVEKEVDIRKRVFNVFNKTIDDFNGDLVEYNKYLEEVEDIIYKLDHGIDVAKTEEK 132 +D + RKR+ +++K + N + + E + D I K + +K ++ Sbjct: 181 LNDPRFDYNKFFRKRMEIIYDKQKNFINYYKAQREENPELIIDDIVKTYLSNEYSKEIDE 240 Query: 133 LRTYEELNKQLIMNNLERSRTEIESFEQRQKFEKEMKLKKRLLERQIEEEERMNKEWTKK 192 L TY E + I N E F+ + F E+ + + W Sbjct: 241 LNTYIEESLNKITQNSGNDVRNFEEFKNGESFN--------------LYEQELVERWNLA 286 Query: 193 EIVNRLSTTTQDINETIEGVKNTVKLKKSSARRKLEELNRVLKNNPYFNSNVNVQNSRLK 252 + L + + + + + +E+ S+V V + Sbjct: 287 AASDILRISALKEIGGMYLDVDMLPGIQPDLFESIEKP-----------SSVTVDFWEMT 335 Query: 253 DAVPFTPFNGDREAHPRFTLKGSVYNDPFIKDLEHRKEFIASGFNTNYAYERVLTEAFMG 312 +E P +T + + E + S F + A + +E F Sbjct: 336 K---LEAIMKYKEYIPEYTSE----------HFDMLDEEVQSSFESVLASKSDKSEIFSS 382 Query: 313 LG 314 LG Sbjct: 383 LG 384 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.311 0.131 0.342 Lambda K H 0.267 0.0393 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,600,221 Number of Sequences: 36641 Number of extensions: 466563 Number of successful extensions: 2210 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 137 Number of HSP's that attempted gapping in prelim test: 2073 Number of HSP's gapped (non-prelim): 246 length of query: 321 length of database: 10,336,785 effective HSP length: 97 effective length of query: 224 effective length of database: 6,782,608 effective search space: 1519304192 effective search space used: 1519304192 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 59 (27.4 bits)