BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q02939 (513 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5SVA-a nrPDB 1053 0.0 5OQM-2 nrPDB 825 0.0 5OQJ-2 nrPDB 412 e-115 6O9M-2 nrPDB 294 6e-80 3DOM-A nrPDB 209 2e-54 3DGP-A nrPDB 163 2e-40 5FMF-W nrPDB 128 5e-30 5OF4-D nrPDB 70 3e-12 2Y9P-A nrPDB 30 2.1 2QGZ-A nrPDB 30 2.4 5V9X-A nrPDB 30 2.7 3NZP-A nrPDB 30 2.9 5GKO-A nrPDB 29 3.9 >5SVA-a nrPDB Length = 513 Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust. Identities = 513/513 (100%), Positives = 513/513 (100%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL Sbjct: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 Query: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS Sbjct: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 Query: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG Sbjct: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 Query: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID Sbjct: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 Query: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR 300 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR Sbjct: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR 300 Query: 301 EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL 360 EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL Sbjct: 301 EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL 360 Query: 361 SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL 420 SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL Sbjct: 361 SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL 420 Query: 421 ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV 480 ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV Sbjct: 421 ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV 480 Query: 481 LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 513 LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ Sbjct: 481 LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 513 >5OQM-2 nrPDB Length = 553 Score = 825 bits (2132), Expect = 0.0, Method: Compositional matrix adjust. Identities = 446/553 (80%), Positives = 446/553 (80%), Gaps = 40/553 (7%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL Sbjct: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 Query: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNAL Sbjct: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALXXXXXXXX 120 Query: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 SEKVLNLLKHSKLMEEVNSTG Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKVLNLLKHSKLMEEVNSTG 180 Query: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 EFKITNEGFQFLLQ KMDLVDVLHFIFMLGALEVGKAYKID Sbjct: 181 EFKITNEGFQFLLQXXXXXXXXXXXXXXXXXXXXKMDLVDVLHFIFMLGALEVGKAYKID 240 Query: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD------------------- 281 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD Sbjct: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDXXXXXXXXXXXXXXXXXXX 300 Query: 282 ---------------------TKTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITT 320 TKTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITT Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXTKTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITT 360 Query: 321 SDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFVHLKARFVNMVLGQITR 380 SDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFVHLKARFVNMVLGQITR Sbjct: 361 SDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFVHLKARFVNMVLGQITR 420 Query: 381 ESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPPTVVDQ 440 ESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPPTVVDQ Sbjct: 421 ESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPPTVVDQ 480 Query: 441 IRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQ 500 IRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQ Sbjct: 481 IRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQ 540 Query: 501 VLDFAKRKLKKKQ 513 VLDFAKRKLKKKQ Sbjct: 541 VLDFAKRKLKKKQ 553 >5OQJ-2 nrPDB Length = 462 Score = 412 bits (1059), Expect = e-115, Method: Compositional matrix adjust. Identities = 214/281 (76%), Positives = 214/281 (76%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL Sbjct: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 Query: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNAL Sbjct: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALXXXXXXXX 120 Query: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 SEKVLNLLKHSKLMEEVNSTG Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKVLNLLKHSKLMEEVNSTG 180 Query: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 EFKITNEGFQFLLQ KMDLVDVLHFIFMLGALEVGKAYKID Sbjct: 181 EFKITNEGFQFLLQXXXXXXXXXXXXXXXXXXXXKMDLVDVLHFIFMLGALEVGKAYKID 240 Query: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD 281 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD Sbjct: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD 281 Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 433 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF 492 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF Sbjct: 382 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF 441 Query: 493 ISKEGNSQVLDFAKRKLKKKQ 513 ISKEGNSQVLDFAKRKLKKKQ Sbjct: 442 ISKEGNSQVLDFAKRKLKKKQ 462 >6O9M-2 nrPDB Length = 462 Score = 294 bits (753), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 175/504 (34%), Positives = 276/504 (54%), Gaps = 73/504 (14%) Query: 12 QYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLLDLDKWVN---S 68 ++L + V +RLY PATCLA++R LP LAK ++M M+F E +P + WV S Sbjct: 21 EFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVKKEFS 80 Query: 69 NGKLQFQNAIKSMKSLHL-LIPNKSSGTLMINLNPTFKISLRNALTGGE---VQNSFGVV 124 + + + ++ H L+P G + LNP F+ +LR AL GG ++ + Sbjct: 81 KAQEESTGLLSGLRIWHTQLLPGGLQGLI---LNPIFRQNLRIALLGGGKAWSDDTSQLG 137 Query: 125 VEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTGEFKI 184 +++ + LD+Y+ +WE +LHFMVG+P A + S+ + LL + LM+ I Sbjct: 138 PDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAV-SQDLAQLLSQAGLMKSTEPGEPPCI 196 Query: 185 TNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKIDALSE 244 T+ GFQFLL + +QLW +LQYL+ ++ MDLV++L F+F L +GK Y ++ +S+ Sbjct: 197 TSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEGMSD 256 Query: 245 TQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNREEPS 304 + LQ +R++GLVFQ+ +YPT+LA+ L+S Sbjct: 257 SLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGV---------------------- 294 Query: 305 VNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFV 364 GA G G ++VETN+++Y+Y+ S LQIA+++LF Sbjct: 295 ---SGAGGTVHQ-------------------PGFIVVETNYRLYAYTESELQIALIALFS 332 Query: 365 HLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDP 424 + RF NMV+ Q+TRES+++A+ +GITA QII +L T AHP M L+ P Sbjct: 333 EMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRAHPVM-----------LKQTP 381 Query: 425 NCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWK 484 VLPPT+ DQIRLW+LE DR+ EG LY+ F + ++ LL +A+++GVL+++ Sbjct: 382 -------VLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFE 434 Query: 485 DDKKKKFFISKEGNSQVLDFAKRK 508 + K+ ++ G+S V F KR+ Sbjct: 435 NSAKRLMVVTPAGHSDVKRFWKRQ 458 >3DOM-A nrPDB Length = 108 Score = 209 bits (532), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 102/102 (100%), Positives = 102/102 (100%) Query: 412 AEEKLEKKLELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLL 471 AEEKLEKKLELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLL Sbjct: 7 AEEKLEKKLELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLL 66 Query: 472 SKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 513 SKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ Sbjct: 67 SKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 108 >3DGP-A nrPDB Length = 80 Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 79/79 (100%), Positives = 79/79 (100%) Query: 435 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFIS 494 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFIS Sbjct: 2 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFIS 61 Query: 495 KEGNSQVLDFAKRKLKKKQ 513 KEGNSQVLDFAKRKLKKKQ Sbjct: 62 KEGNSQVLDFAKRKLKKKQ 80 >5FMF-W nrPDB Length = 62 Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 62/62 (100%), Positives = 62/62 (100%) Query: 447 ELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAK 506 ELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAK Sbjct: 1 ELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAK 60 Query: 507 RK 508 RK Sbjct: 61 RK 62 >5OF4-D nrPDB Length = 85 Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 32/76 (42%), Positives = 52/76 (68%) Query: 433 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF 492 LPPT+ DQIRLW+LE DR+ EG LY+ F + ++ LL +A+++GVL++++ K+ Sbjct: 6 LPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENSAKRLMV 65 Query: 493 ISKEGNSQVLDFAKRK 508 ++ G+S V F KR+ Sbjct: 66 VTPAGHSDVKRFWKRQ 81 >2Y9P-A nrPDB Length = 172 Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust. Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 23/126 (18%) Query: 93 SGTLMINLNPTFKISLRNALTGGEVQNSFGVVVEENVVSLDLLDEYSANKWETILHFMVG 152 + T M + +K+ L+ + + N + ++E SL+ +DE +KWE I+ Sbjct: 4 ADTCMSRIVKEYKVILKTLASDDPIANPYRGIIE----SLNPIDETDLSKWEAIISGPSD 59 Query: 153 TP--------LAKIPSEKVLNLLKHSKLMEEV------NSTGEFKITNEGFQFLLQEINS 198 TP L ++PS +N K S + + ++TGE L E + Sbjct: 60 TPYENHQFRILIEVPSSYPMNPPKISFMQNNILHCNVKSATGEI-----CLNILKPEEWT 114 Query: 199 QLWTLL 204 +W LL Sbjct: 115 PVWDLL 120 >2QGZ-A nrPDB Length = 308 Score = 30.0 bits (66), Expect = 2.4, Method: Compositional matrix adjust. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Query: 85 HLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNSFGVVVEENVVSLDLLDEYSANKW 143 H L K T +++ P+F I ++NA++ G V+ V V+ LD + A W Sbjct: 174 HELSEKKGVSTTLLHF-PSFAIDVKNAISNGSVKEEIDAVKNVPVLILDDIGAEQATSW 231 >5V9X-A nrPDB Length = 877 Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust. Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 1/43 (2%) Query: 257 GLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQN 299 G++F KH D I + M T D +T+R +N +D VL Q+ Sbjct: 426 GVLFPKHRTDLIGCAVTVQRMQTGDIETLRVPANPLD-VLAQH 467 >3NZP-A nrPDB Length = 619 Score = 29.6 bits (65), Expect = 2.9, Method: Compositional matrix adjust. Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 6/71 (8%) Query: 101 NPTFKISLRNALTG-----GEVQNSFGVVVEENVVSLDLLDEYSANKWETILHFMVGTPL 155 N ++ L +A G G + + FG+ E + +++LL E + T++HF +G+ + Sbjct: 179 NIGLRVRLHSAGVGIWAKSGGINSKFGLTSTELIEAVNLLKENKLLEQFTMIHFHLGSQI 238 Query: 156 AKI-PSEKVLN 165 +I P +K LN Sbjct: 239 TEIHPLKKALN 249 >5GKO-A nrPDB Length = 671 Score = 29.3 bits (64), Expect = 3.9, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%) Query: 376 GQITRESIRRALTNG---ITADQIIAYLETHAHPQMRRLAEE 414 GQ R SI RAL NG I AD+ L++H+ ++ R+ E Sbjct: 157 GQQQRVSIARALMNGGDVILADEPTGALDSHSGVEVMRILRE 198 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5SVA-a nrPDB 832 0.0 6O9M-2 nrPDB 676 0.0 5OQM-2 nrPDB 656 0.0 5OQJ-2 nrPDB 331 4e-91 3DOM-A nrPDB 167 8e-42 5OF4-D nrPDB 139 2e-33 3DGP-A nrPDB 132 3e-31 5FMF-W nrPDB 100 2e-21 Sequences not found previously or not previously below threshold: 1W1W-A nrPDB 33 0.40 4X04-A nrPDB 29 4.8 2M0O-A nrPDB 29 5.9 2PAN-A nrPDB 29 6.4 5ENQ-A nrPDB 29 7.5 CONVERGED! >5SVA-a nrPDB Length = 513 Score = 832 bits (2150), Expect = 0.0, Method: Composition-based stats. Identities = 513/513 (100%), Positives = 513/513 (100%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL Sbjct: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 Query: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS Sbjct: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 Query: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG Sbjct: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 Query: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID Sbjct: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 Query: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR 300 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR Sbjct: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNR 300 Query: 301 EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL 360 EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL Sbjct: 301 EEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVL 360 Query: 361 SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL 420 SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL Sbjct: 361 SLFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKL 420 Query: 421 ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV 480 ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV Sbjct: 421 ELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGV 480 Query: 481 LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 513 LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ Sbjct: 481 LLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 513 >6O9M-2 nrPDB Length = 462 Score = 676 bits (1745), Expect = 0.0, Method: Composition-based stats. Identities = 175/507 (34%), Positives = 278/507 (54%), Gaps = 73/507 (14%) Query: 9 SVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLLDLDKWVN- 67 ++ ++L + V +RLY PATCLA++R LP LAK ++M M+F E +P + WV Sbjct: 18 NLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRMLFLEQPLPQAAVALWVKK 77 Query: 68 --SNGKLQFQNAIKSMKSLHL-LIPNKSSGTLMINLNPTFKISLRNALTGGE---VQNSF 121 S + + + ++ H L+P G + LNP F+ +LR AL GG ++ Sbjct: 78 EFSKAQEESTGLLSGLRIWHTQLLPGGLQGLI---LNPIFRQNLRIALLGGGKAWSDDTS 134 Query: 122 GVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTGE 181 + +++ + LD+Y+ +WE +LHFMVG+P A + S+ + LL + LM+ Sbjct: 135 QLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAV-SQDLAQLLSQAGLMKSTEPGEP 193 Query: 182 FKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKIDA 241 IT+ GFQFLL + +QLW +LQYL+ ++ MDLV++L F+F L +GK Y ++ Sbjct: 194 PCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQLSFSTLGKDYSVEG 253 Query: 242 LSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDTKTIRSASNAMDSVLRQNRE 301 +S++ LQ +R++GLVFQ+ +YPT+LA+ L+S Sbjct: 254 MSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGV------------------- 294 Query: 302 EPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLS 361 GA G G ++VETN+++Y+Y+ S LQIA+++ Sbjct: 295 ------SGAGGTVHQ-------------------PGFIVVETNYRLYAYTESELQIALIA 329 Query: 362 LFVHLKARFVNMVLGQITRESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLE 421 LF + RF NMV+ Q+TRES+++A+ +GITA QII +L T AHP M L+ Sbjct: 330 LFSEMLYRFPNMVVAQVTRESVQQAIASGITAQQIIHFLRTRAHPVM-----------LK 378 Query: 422 LDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVL 481 P VLPPT+ DQIRLW+LE DR+ EG LY+ F + ++ LL +A+++GVL Sbjct: 379 QTP-------VLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVL 431 Query: 482 LWKDDKKKKFFISKEGNSQVLDFAKRK 508 ++++ K+ ++ G+S V F KR+ Sbjct: 432 VFENSAKRLMVVTPAGHSDVKRFWKRQ 458 >5OQM-2 nrPDB Length = 553 Score = 656 bits (1692), Expect = 0.0, Method: Composition-based stats. Identities = 446/553 (80%), Positives = 446/553 (80%), Gaps = 40/553 (7%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL Sbjct: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 Query: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNAL Sbjct: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALXXXXXXXX 120 Query: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 SEKVLNLLKHSKLMEEVNSTG Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKVLNLLKHSKLMEEVNSTG 180 Query: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 EFKITNEGFQFLLQ KMDLVDVLHFIFMLGALEVGKAYKID Sbjct: 181 EFKITNEGFQFLLQXXXXXXXXXXXXXXXXXXXXKMDLVDVLHFIFMLGALEVGKAYKID 240 Query: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD------------------- 281 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD Sbjct: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSDXXXXXXXXXXXXXXXXXXX 300 Query: 282 ---------------------TKTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITT 320 TKTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITT Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXTKTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITT 360 Query: 321 SDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFVHLKARFVNMVLGQITR 380 SDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFVHLKARFVNMVLGQITR Sbjct: 361 SDDLNKAGLKNQDIPDGSLIVETNFKIYSYSNSPLQIAVLSLFVHLKARFVNMVLGQITR 420 Query: 381 ESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPPTVVDQ 440 ESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPPTVVDQ Sbjct: 421 ESIRRALTNGITADQIIAYLETHAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPPTVVDQ 480 Query: 441 IRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQ 500 IRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQ Sbjct: 481 IRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQ 540 Query: 501 VLDFAKRKLKKKQ 513 VLDFAKRKLKKKQ Sbjct: 541 VLDFAKRKLKKKQ 553 >5OQJ-2 nrPDB Length = 462 Score = 331 bits (849), Expect = 4e-91, Method: Composition-based stats. Identities = 214/281 (76%), Positives = 214/281 (76%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL Sbjct: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 Query: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALTGGEVQNS 120 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNAL Sbjct: 61 DLDKWVNSNGKLQFQNAIKSMKSLHLLIPNKSSGTLMINLNPTFKISLRNALXXXXXXXX 120 Query: 121 FGVVVEENVVSLDLLDEYSANKWETILHFMVGTPLAKIPSEKVLNLLKHSKLMEEVNSTG 180 SEKVLNLLKHSKLMEEVNSTG Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEKVLNLLKHSKLMEEVNSTG 180 Query: 181 EFKITNEGFQFLLQEINSQLWTLLLQYLKMIETSKMDLVDVLHFIFMLGALEVGKAYKID 240 EFKITNEGFQFLLQ KMDLVDVLHFIFMLGALEVGKAYKID Sbjct: 181 EFKITNEGFQFLLQXXXXXXXXXXXXXXXXXXXXKMDLVDVLHFIFMLGALEVGKAYKID 240 Query: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD 281 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD Sbjct: 241 ALSETQRIMLQDMRDYGLVFQKHSNDSIFYPTKLALMLTSD 281 Score = 120 bits (301), Expect = 1e-27, Method: Composition-based stats. Identities = 81/81 (100%), Positives = 81/81 (100%) Query: 433 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF 492 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF Sbjct: 382 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF 441 Query: 493 ISKEGNSQVLDFAKRKLKKKQ 513 ISKEGNSQVLDFAKRKLKKKQ Sbjct: 442 ISKEGNSQVLDFAKRKLKKKQ 462 >3DOM-A nrPDB Length = 108 Score = 167 bits (423), Expect = 8e-42, Method: Composition-based stats. Identities = 102/102 (100%), Positives = 102/102 (100%) Query: 412 AEEKLEKKLELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLL 471 AEEKLEKKLELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLL Sbjct: 7 AEEKLEKKLELDPNCKEPLQVLPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLL 66 Query: 472 SKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 513 SKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ Sbjct: 67 SKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAKRKLKKKQ 108 >5OF4-D nrPDB Length = 85 Score = 139 bits (350), Expect = 2e-33, Method: Composition-based stats. Identities = 32/76 (42%), Positives = 52/76 (68%) Query: 433 LPPTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF 492 LPPT+ DQIRLW+LE DR+ EG LY+ F + ++ LL +A+++GVL++++ K+ Sbjct: 6 LPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFELLLAHARELGVLVFENSAKRLMV 65 Query: 493 ISKEGNSQVLDFAKRK 508 ++ G+S V F KR+ Sbjct: 66 VTPAGHSDVKRFWKRQ 81 >3DGP-A nrPDB Length = 80 Score = 132 bits (332), Expect = 3e-31, Method: Composition-based stats. Identities = 79/79 (100%), Positives = 79/79 (100%) Query: 435 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFIS 494 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFIS Sbjct: 2 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFIS 61 Query: 495 KEGNSQVLDFAKRKLKKKQ 513 KEGNSQVLDFAKRKLKKKQ Sbjct: 62 KEGNSQVLDFAKRKLKKKQ 80 >5FMF-W nrPDB Length = 62 Score = 100 bits (248), Expect = 2e-21, Method: Composition-based stats. Identities = 62/62 (100%), Positives = 62/62 (100%) Query: 447 ELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAK 506 ELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAK Sbjct: 1 ELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFFISKEGNSQVLDFAK 60 Query: 507 RK 508 RK Sbjct: 61 RK 62 >1W1W-A nrPDB Length = 430 Score = 32.8 bits (73), Expect = 0.40, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 12/129 (9%) Query: 283 KTIRSASNAMDSVLRQNREEPSVNEDGANGKSTTDITTSDDLNKAGLKNQDIPDGSLIVE 342 KT S+ +D++ R+ + P+ N + A G ++ I D+ AG+K P + Sbjct: 271 KTFDYVSDHLDAIYRELTKNPNSNVELAGGNASLTIEDEDEPFNAGIKYHATPPLKRFKD 330 Query: 343 TNFKIYSYSNSPLQIAVLSLFVHLKARFVN--MVLGQITRESIRRALTNGITADQIIAYL 400 + S +A L+L + + + VL ++ A + +I AY+ Sbjct: 331 MEY----LSGGEKTVAALALLFAINSYQPSPFFVLDEV------DAALDITNVQRIAAYI 380 Query: 401 ETHAHPQMR 409 H +P ++ Sbjct: 381 RRHRNPDLQ 389 >4X04-A nrPDB Length = 323 Score = 29.0 bits (63), Expect = 4.8, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 2/73 (2%) Query: 1 MSDYSLKHSVTQYLEEIPQQVQNRLYTSPATCLAIYRILPPLAKFFIMAMVFNENEVPLL 60 M S+ V++ + V + +P T +A P+AK + ++ F E+ L Sbjct: 183 MGANSVAMGVSEVFSGMQTGVIDGAENNPPTFVA--HNYMPVAKNYTLSGHFITPEMLLY 240 Query: 61 DLDKWVNSNGKLQ 73 KW Q Sbjct: 241 SKVKWDKLTADEQ 253 >2M0O-A nrPDB Length = 79 Score = 29.0 bits (63), Expect = 5.9, Method: Composition-based stats. Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 9/66 (13%) Query: 435 PTVVDQIRLWQLELDRVITYEGSLYSDFETSQEYNLLSKYAQDIGVLLWKDDKKKKFF-- 492 PT + RLW+ + +G LY + A+++ ++ ++DD + Sbjct: 19 PTSGPRPRLWEGQDVLARWTDGLLYLGTIKKVD------SAREVCLVQFEDDSQFLVLWK 72 Query: 493 -ISKEG 497 IS Sbjct: 73 DISPAA 78 >2PAN-A nrPDB Length = 616 Score = 28.6 bits (62), Expect = 6.4, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 22/55 (40%), Gaps = 1/55 (1%) Query: 382 SIRRALTNGITADQIIAYLET-HAHPQMRRLAEEKLEKKLELDPNCKEPLQVLPP 435 ++R A Q + + P + L + ++E DP+ EPL V P Sbjct: 155 TVREAALVPRVLQQAFHLMRSGRPGPVLVDLPFDVQVAEIEFDPDMYEPLPVYKP 209 >5ENQ-A nrPDB Length = 609 Score = 28.6 bits (62), Expect = 7.5, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%) Query: 34 AIYRILPPLAKFFIMAMVFNENEVPLLDLD--KWVNSNGKLQFQNAIKSMKSLHLLIPNK 91 A YR+LP + + + VP +W + +L+ N + SM+ L P K Sbjct: 517 AKYRMLPDDIGDWYVRAA-DGQMVPFSAFSSSRWEYGSPRLERYNGLPSMEILGQAAPGK 575 Query: 92 SSGTLM 97 S+G M Sbjct: 576 STGEAM 581 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.126 0.341 Lambda K H 0.267 0.0373 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,200,701 Number of Sequences: 36641 Number of extensions: 630581 Number of successful extensions: 2027 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 14 Number of HSP's that attempted gapping in prelim test: 1982 Number of HSP's gapped (non-prelim): 44 length of query: 513 length of database: 10,336,785 effective HSP length: 101 effective length of query: 412 effective length of database: 6,636,044 effective search space: 2734050128 effective search space used: 2734050128 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 61 (28.2 bits)