BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q02260 (146 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5GMK-m nrPDB 290 1e-79 3JB9-F nrPDB 78 1e-15 4WZJ-C nrPDB 75 8e-15 5XJU-A nrPDB 75 1e-14 6QX9-62 nrPDB 44 3e-05 5VSU-B nrPDB 38 0.002 4N0A-C nrPDB 38 0.002 3JB9-D nrPDB 37 0.003 4C8Q-B nrPDB 37 0.003 4M75-G nrPDB 32 0.13 4C8Q-D nrPDB 32 0.13 5ZWM-s nrPDB 32 0.14 6ASO-C nrPDB 31 0.18 6ID1-a nrPDB 31 0.23 6ASO-D nrPDB 31 0.24 4EMH-A nrPDB 30 0.28 6BK8-g nrPDB 30 0.36 6QW6-64 nrPDB 30 0.43 6QDV-d nrPDB 29 0.59 2YVW-A nrPDB 29 0.62 5XK2-A nrPDB 28 1.3 1D3B-A nrPDB 28 1.9 4JCO-A nrPDB 28 1.9 4O0M-A nrPDB 27 3.7 3F4L-A nrPDB 27 4.5 6J9S-A nrPDB 26 4.9 3JB9-I nrPDB 26 5.7 3JB9-J nrPDB 26 6.4 3L0G-A nrPDB 26 6.9 3VRL-C nrPDB 26 7.1 1M5Q-A nrPDB 25 8.8 >5GMK-m nrPDB Length = 146 Score = 290 bits (742), Expect = 1e-79, Method: Compositional matrix adjust. Identities = 146/146 (100%), Positives = 146/146 (100%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI Sbjct: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSG 120 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSG Sbjct: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSG 120 Query: 121 QIANDPSKKRRRDFGAPANKRPRRGL 146 QIANDPSKKRRRDFGAPANKRPRRGL Sbjct: 121 QIANDPSKKRRRDFGAPANKRPRRGL 146 >3JB9-F nrPDB Length = 117 Score = 78.2 bits (191), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 27/109 (24%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLV FL KL NE V+IELKNGT V GT+ SV QMN L VK+T+ Sbjct: 1 MKLVRFLMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTV------------- 47 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 G++P ++ ++IRGN IR ILPDSL LD+LL+D Sbjct: 48 --------KGREP------VPVETLSIRGNNIRYYILPDSLPLDTLLID 82 >4WZJ-C nrPDB Length = 118 Score = 75.5 bits (184), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 27/109 (24%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLV FL KL +E VTIELKNGT V GT+ V MN L VK+TL Sbjct: 1 MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTL------------- 47 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 ++P L+ ++IRGN IR ILPDSL LD+LLVD Sbjct: 48 --------KNREP------VQLETLSIRGNNIRYFILPDSLPLDTLLVD 82 >5XJU-A nrPDB Length = 82 Score = 74.7 bits (182), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 27/109 (24%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLV FL KL +E VTIELKNGT V GT+ V MN L VK+TL Sbjct: 1 MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKN----------- 49 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 ++P L+ ++IRGN IR ILPDSL LD+LLVD Sbjct: 50 ----------REP------VQLETLSIRGNNIRYFILPDSLPLDTLLVD 82 >6QX9-62 nrPDB Length = 95 Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 20/49 (40%), Positives = 29/49 (59%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQ 49 M +F K L + V +ELKN ++ GTL SV +N LTD+ +T P+ Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPE 49 >5VSU-B nrPDB Length = 98 Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 25/97 (25%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M +F K L +++V +ELKN + GTLQSV +N L ++ T + Sbjct: 4 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEK----------- 52 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIIL 97 + P ++ S++ I IRG+T+R + L Sbjct: 53 ----------KYP----HLGSVRNIFIRGSTVRYVYL 75 >4N0A-C nrPDB Length = 109 Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust. Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 25/97 (25%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M +F K L +++V +ELKN + GTLQSV +N L ++ T + Sbjct: 15 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEK----------- 63 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIIL 97 + P ++ S++ I IRG+T+R + L Sbjct: 64 ----------KYP----HLGSVRNIFIRGSTVRYVYL 86 >3JB9-D nrPDB Length = 97 Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust. Identities = 25/99 (25%), Positives = 41/99 (41%), Gaps = 27/99 (27%) Query: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAM 62 + L + + VT+EL+NG+T G L MN + D+ +T R++ L+ Sbjct: 4 CIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGRVSHLDQ----- 58 Query: 63 ASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + IRG+ IR +I+PD L Sbjct: 59 ----------------------VYIRGSHIRFLIVPDML 75 >4C8Q-B nrPDB Length = 105 Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 25/95 (26%) Query: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAM 62 +F K L +++V +ELKN + GTLQSV +N L ++ T + Sbjct: 13 FFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEK------------- 59 Query: 63 ASLYLTGGQQPTASDNIASLQYINIRGNTIRQIIL 97 + P ++ S++ I IRG+T+R + L Sbjct: 60 --------KYP----HLGSVRNIFIRGSTVRYVYL 82 >4M75-G nrPDB Length = 122 Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASL 65 L + +Q+ IELKNG + G L +V MN L++V + +N Sbjct: 35 LLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAIN------------ 82 Query: 66 YLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + S L I IRG I+ I L D++ Sbjct: 83 ----SEDNAESSKAVKLNEIYIRGTFIKFIKLQDNI 114 >4C8Q-D nrPDB Length = 114 Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASL 65 L + +Q+ IELKNG + G L +V MN L++V + +N Sbjct: 6 LLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAIN------------ 53 Query: 66 YLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + S L I IRG I+ I L D++ Sbjct: 54 ----SEDNAESSKAVKLNEIYIRGTFIKFIKLQDNI 85 >5ZWM-s nrPDB Length = 187 Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust. Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 16/95 (16%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLY 66 L + +Q+ IELKNG + G L +V MN L++V + +N Sbjct: 7 LTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAIN------------- 53 Query: 67 LTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + S L I IRG I+ I L D++ Sbjct: 54 ---SEDNAESSKAVKLNEIYIRGTFIKFIKLQDNI 85 >6ASO-C nrPDB Length = 97 Score = 31.2 bits (69), Expect = 0.18, Method: Compositional matrix adjust. Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 20/95 (21%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 ++ LK +E+V I+L+ T+ GTLQ+ N +L+D A+ Sbjct: 5 LDLLKLNLDERVYIKLRGARTLVGTLQAFDSHCNIVLSD------------------AVE 46 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP 98 ++Y ++ + S+ + + IRG+T+ I P Sbjct: 47 TIYQLNNEELSESERRCEMVF--IRGDTVTLISTP 79 >6ID1-a nrPDB Length = 126 Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust. Identities = 26/111 (23%), Positives = 39/111 (35%), Gaps = 27/111 (24%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 + L + VT E G G L MN ++++ +T R Sbjct: 7 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGR------------ 54 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLN 114 +A L+ + IRG+ IR +ILPD L +L K N Sbjct: 55 ---------------VAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKN 90 >6ASO-D nrPDB Length = 93 Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust. Identities = 26/96 (27%), Positives = 39/96 (40%), Gaps = 16/96 (16%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASL 65 L + +Q+ IELKNG + G L +V MN L++V + +N Sbjct: 6 LLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAIN------------ 53 Query: 66 YLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + S L I IRG I+ I L D++ Sbjct: 54 ----SEDNAESSKAVKLNEIYIRGTFIKFIKLQDNI 85 >4EMH-A nrPDB Length = 105 Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust. Identities = 14/34 (41%), Positives = 20/34 (58%) Query: 15 VTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP 48 + +ELKNG T G L++ MN L +V T+P Sbjct: 29 ILVELKNGETFNGHLENCDNYMNLTLREVIRTMP 62 >6BK8-g nrPDB Length = 101 Score = 30.0 bits (66), Expect = 0.36, Method: Compositional matrix adjust. Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 27/98 (27%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 V L + + V++EL G T G L MN L DV T PQ Sbjct: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQ-------------- 53 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + + I +RG+ I+ I++PD L Sbjct: 54 -------------GAVTHMDQIFVRGSQIKFIVVPDLL 78 >6QW6-64 nrPDB Length = 139 Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust. Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 26/98 (26%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 ++ LK +N + +ELKNG T G L S MN L +V T + +G Sbjct: 4 LSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICT---------SRDG---- 50 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 D + IRG+TI+ + +PD + Sbjct: 51 -------------DKFWRMPECYIRGSTIKYLRIPDEI 75 >6QDV-d nrPDB Length = 84 Score = 29.3 bits (64), Expect = 0.59, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 27/98 (27%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 + L + VT E G G L MN ++++ +T R Sbjct: 6 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGR------------ 53 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 +A L+ + IRG+ IR +ILPD L Sbjct: 54 ---------------VAQLEQVYIRGSKIRFLILPDML 76 >2YVW-A nrPDB Length = 425 Score = 29.3 bits (64), Expect = 0.62, Method: Compositional matrix adjust. Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 17/111 (15%) Query: 1 MKLVNFLKKLRNEQVTIE-----LKNGTTVWGTLQSVSP--------QMNAILTDVKLTL 47 M L+ LKK+ V +E +K + G SV P + A+LTD ++ L Sbjct: 200 MDLIEVLKKM-GAHVKVEGRSAYVKGSENLKGFTHSVIPDRIEAGTFMVGAVLTDGEILL 258 Query: 48 PQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP 98 R+N L + + L L GG+ + N+ + ++R I + P Sbjct: 259 ENARINHLRA---VVEKLKLIGGEVVEENGNLRVFRKESLRACDIETQVYP 306 >5XK2-A nrPDB Length = 286 Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Query: 48 PQPRLNKLNSNGIAMA-SLYLTGGQQPTASDNIASL--QYINIRGNTIRQIILPDSLNLD 104 P P+L L + ++ Y+T T +DN ++ Y+N +GNT LPD L Sbjct: 207 PVPKLPLLTMGYVHISPEYYITAPDNTTVTDNQVTVLDGYVNFKGNTGTSGGLPDLLAFH 266 Query: 105 SLLVDQKQLNSLRRSG 120 S + ++ + G Sbjct: 267 SHVWYFIHADACKGPG 282 >1D3B-A nrPDB Length = 75 Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust. Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 27/96 (28%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 + L + VT E G G L MN ++++ +T R Sbjct: 7 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGR------------ 54 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPD 99 +A L+ + IRG IR +ILPD Sbjct: 55 ---------------VAQLEQVYIRGCKIRFLILPD 75 >4JCO-A nrPDB Length = 304 Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust. Identities = 13/43 (30%), Positives = 20/43 (46%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP 48 L L+ + + + G T WG + V+ + AIL D LP Sbjct: 204 LLGDLQESAMDVIERKGATEWGPARGVAHMVEAILHDTGEVLP 246 >4O0M-A nrPDB Length = 524 Score = 26.6 bits (57), Expect = 3.7, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 19/40 (47%) Query: 56 NSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQI 95 N+ M S +T T +D I LQY+ IRG R I Sbjct: 414 NTTDQFMGSNSITESHISTITDTILLLQYVEIRGEMSRAI 453 >3F4L-A nrPDB Length = 345 Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust. Identities = 9/26 (34%), Positives = 17/26 (65%) Query: 74 TASDNIASLQYINIRGNTIRQIILPD 99 A D++ L+Y+N G T+R+ + P+ Sbjct: 269 AADDSVGVLEYVNDEGVTVREEMKPE 294 >6J9S-A nrPDB Length = 326 Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 22/47 (46%) Query: 2 KLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLP 48 KLV + +RN+ I G T +G +++ AIL D LP Sbjct: 213 KLVKMFEDVRNKAYEIIKLKGATFYGIATALARISKAILNDENAVLP 259 >3JB9-I nrPDB Length = 78 Score = 26.2 bits (56), Expect = 5.7, Method: Compositional matrix adjust. Identities = 15/32 (46%), Positives = 18/32 (56%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMN 37 FL+ L + V + LK G GTLQSV MN Sbjct: 11 FLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMN 42 >3JB9-J nrPDB Length = 77 Score = 25.8 bits (55), Expect = 6.4, Method: Compositional matrix adjust. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 LKK + QV ++L V+G L+ +N +L D Sbjct: 9 LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLED 44 >3L0G-A nrPDB Length = 300 Score = 25.8 bits (55), Expect = 6.9, Method: Compositional matrix adjust. Identities = 13/45 (28%), Positives = 25/45 (55%) Query: 83 QYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSGQIANDPS 127 +YI I + I Q+ S N+D +L+D ++ ++++ I N S Sbjct: 208 EYIAIECDNISQVEESLSNNVDMILLDNMSISEIKKAVDIVNGKS 252 >3VRL-C nrPDB Length = 231 Score = 25.8 bits (55), Expect = 7.1, Method: Compositional matrix adjust. Identities = 14/35 (40%), Positives = 19/35 (54%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAIL 40 F K LR EQ T ++KN T +Q+ +P IL Sbjct: 168 FFKTLRAEQCTQDVKNWMTDTLLVQNANPDCKTIL 202 >1M5Q-A nrPDB Length = 130 Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust. Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%) Query: 6 FLKKLRN---EQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 F+ +L N +V + L NG G L +V Q+N +L + Sbjct: 1 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLAN 40 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5GMK-m nrPDB 207 2e-54 3JB9-F nrPDB 104 2e-23 5XJU-A nrPDB 103 2e-23 4WZJ-C nrPDB 102 4e-23 6QX9-62 nrPDB 88 1e-18 5VSU-B nrPDB 88 1e-18 4N0A-C nrPDB 87 2e-18 Sequences not found previously or not previously below threshold: 4C8Q-B nrPDB 86 4e-18 4M75-G nrPDB 43 4e-05 5ZWM-s nrPDB 43 6e-05 4C8Q-D nrPDB 42 9e-05 6ASO-D nrPDB 42 1e-04 6QW6-64 nrPDB 41 2e-04 3JB9-I nrPDB 39 8e-04 3JB9-D nrPDB 37 0.004 6QDV-f nrPDB 35 0.010 5Z58-f nrPDB 35 0.010 1M5Q-A nrPDB 35 0.016 4EMH-A nrPDB 35 0.016 6ID1-a nrPDB 34 0.024 6QDV-d nrPDB 33 0.052 3PGG-A nrPDB 32 0.061 5VSU-F nrPDB 32 0.094 6BK8-g nrPDB 32 0.13 1D3B-A nrPDB 31 0.18 6QX9-66 nrPDB 30 0.39 5MKL-A1 nrPDB 30 0.42 6AH0-d nrPDB 30 0.43 3JB9-J nrPDB 29 0.52 4BIP-B nrPDB 29 0.57 4N53-B nrPDB 29 0.68 3J91-0 nrPDB 29 0.68 1LJO-A nrPDB 29 1.0 3N37-A nrPDB 28 1.4 3GV2-A nrPDB 28 1.7 5XJX-C nrPDB 28 1.7 5XS7-B nrPDB 28 1.8 5XS5-B nrPDB 28 1.8 5NEW-A nrPDB 27 2.0 5YHQ-B nrPDB 27 2.2 4XQ3-A nrPDB 27 2.2 3SWN-C nrPDB 27 2.2 5C9A-B nrPDB 27 3.2 5C4W-B nrPDB 27 3.2 4Y1P-A nrPDB 27 3.5 1Q1R-A nrPDB 27 3.8 1U1T-A nrPDB 26 5.2 2LF4-A nrPDB 26 6.4 2JYL-A nrPDB 26 7.0 5NGM-Ai nrPDB 26 7.5 3JB9-H nrPDB 26 7.6 5O2U-A nrPDB 26 8.5 5LJ3-g nrPDB 26 9.1 >5GMK-m nrPDB Length = 146 Score = 207 bits (526), Expect = 2e-54, Method: Composition-based stats. Identities = 146/146 (100%), Positives = 146/146 (100%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI Sbjct: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSG 120 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSG Sbjct: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSG 120 Query: 121 QIANDPSKKRRRDFGAPANKRPRRGL 146 QIANDPSKKRRRDFGAPANKRPRRGL Sbjct: 121 QIANDPSKKRRRDFGAPANKRPRRGL 146 >3JB9-F nrPDB Length = 117 Score = 104 bits (259), Expect = 2e-23, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 61/109 (55%), Gaps = 27/109 (24%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLV FL KL NE V+IELKNGT V GT+ SV QMN L VK+T+ Sbjct: 1 MKLVRFLMKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTV------------- 47 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 G++P ++ ++IRGN IR ILPDSL LD+LL+D Sbjct: 48 --------KGREP------VPVETLSIRGNNIRYYILPDSLPLDTLLID 82 >5XJU-A nrPDB Length = 82 Score = 103 bits (257), Expect = 2e-23, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 27/109 (24%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLV FL KL +E VTIELKNGT V GT+ V MN L VK+TL Sbjct: 1 MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTL------------- 47 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 ++P L+ ++IRGN IR ILPDSL LD+LLVD Sbjct: 48 --------KNREP------VQLETLSIRGNNIRYFILPDSLPLDTLLVD 82 >4WZJ-C nrPDB Length = 118 Score = 102 bits (255), Expect = 4e-23, Method: Composition-based stats. Identities = 49/109 (44%), Positives = 58/109 (53%), Gaps = 27/109 (24%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 MKLV FL KL +E VTIELKNGT V GT+ V MN L VK+TL Sbjct: 1 MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTL------------- 47 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 ++P L+ ++IRGN IR ILPDSL LD+LLVD Sbjct: 48 --------KNREP------VQLETLSIRGNNIRYFILPDSLPLDTLLVD 82 >6QX9-62 nrPDB Length = 95 Score = 88.0 bits (216), Expect = 1e-18, Method: Composition-based stats. Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 25/118 (21%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M +F K L + V +ELKN ++ GTL SV +N LTD+ +T P+ Sbjct: 1 MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPE----------- 49 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRR 118 + P ++ S++ IRG+ +R + LP LL D + +L++ Sbjct: 50 ----------KYP----HMLSVKNCFIRGSVVRYVQLPADEVDTQLLQDAARKEALQQ 93 >5VSU-B nrPDB Length = 98 Score = 88.0 bits (216), Expect = 1e-18, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 25/109 (22%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M +F K L +++V +ELKN + GTLQSV +N L ++ T + Sbjct: 4 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEK----------- 52 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 + P ++ S++ I IRG+T+R + L ++ +LL D Sbjct: 53 ----------KYP----HLGSVRNIFIRGSTVRYVYLNKNMVDTNLLQD 87 >4N0A-C nrPDB Length = 109 Score = 87.2 bits (214), Expect = 2e-18, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 25/109 (22%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M +F K L +++V +ELKN + GTLQSV +N L ++ T + Sbjct: 15 MLFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEK----------- 63 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 + P ++ S++ I IRG+T+R + L ++ +LL D Sbjct: 64 ----------KYP----HLGSVRNIFIRGSTVRYVYLNKNMVDTNLLQD 98 >4C8Q-B nrPDB Length = 105 Score = 86.4 bits (212), Expect = 4e-18, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 25/108 (23%) Query: 2 KLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIA 61 +F K L +++V +ELKN + GTLQSV +N L ++ T + Sbjct: 12 LFFSFFKTLVDQEVVVELKNDIEIKGTLQSVDQFLNLKLDNISCTDEK------------ 59 Query: 62 MASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD 109 + P ++ S++ I IRG+T+R + L ++ +LL D Sbjct: 60 ---------KYP----HLGSVRNIFIRGSTVRYVYLNKNMVDTNLLQD 94 >4M75-G nrPDB Length = 122 Score = 43.3 bits (100), Expect = 4e-05, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M + L + +Q+ IELKNG + G L +V MN L++V + +N ++ Sbjct: 30 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 89 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + A L I IRG I+ I L D++ Sbjct: 90 SKA----------------VKLNEIYIRGTFIKFIKLQDNI 114 >5ZWM-s nrPDB Length = 187 Score = 42.5 bits (98), Expect = 6e-05, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M + L + +Q+ IELKNG + G L +V MN L++V + +N ++ Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + A L I IRG I+ I L D++ Sbjct: 61 SKA----------------VKLNEIYIRGTFIKFIKLQDNI 85 >4C8Q-D nrPDB Length = 114 Score = 42.1 bits (97), Expect = 9e-05, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M + L + +Q+ IELKNG + G L +V MN L++V + +N ++ Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + A L I IRG I+ I L D++ Sbjct: 61 SKA----------------VKLNEIYIRGTFIKFIKLQDNI 85 >6ASO-D nrPDB Length = 93 Score = 42.1 bits (97), Expect = 1e-04, Method: Composition-based stats. Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 16/101 (15%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M + L + +Q+ IELKNG + G L +V MN L++V + +N ++ Sbjct: 1 MLPLYLLTNAKGQQMQIELKNGEIIQGILTNVDNWMNLTLSNVTEYSEESAINSEDNAES 60 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 + A L I IRG I+ I L D++ Sbjct: 61 SKA----------------VKLNEIYIRGTFIKFIKLQDNI 85 >6QW6-64 nrPDB Length = 139 Score = 41.0 bits (94), Expect = 2e-04, Method: Composition-based stats. Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 26/101 (25%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M ++ LK +N + +ELKNG T G L S MN L +V T Sbjct: 1 MLPLSLLKTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICT-------------- 46 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 D + IRG+TI+ + +PD + Sbjct: 47 ------------SRDGDKFWRMPECYIRGSTIKYLRIPDEI 75 >3JB9-I nrPDB Length = 78 Score = 39.0 bits (89), Expect = 8e-04, Method: Composition-based stats. Identities = 16/37 (43%), Positives = 20/37 (54%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 FL+ L + V + LK G GTLQSV MN L + Sbjct: 11 FLQGLIGKPVLVRLKWGQEYKGTLQSVDSYMNLQLLN 47 >3JB9-D nrPDB Length = 97 Score = 36.7 bits (83), Expect = 0.004, Method: Composition-based stats. Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 27/100 (27%) Query: 2 KLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIA 61 + L + + VT+EL+NG+T G L MN + D+ +T R Sbjct: 3 LCIKLLHETQGHIVTMELENGSTYRGKLIEAEDNMNCQMRDISVTARDGR---------- 52 Query: 62 MASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 ++ L + IRG+ IR +I+PD L Sbjct: 53 -----------------VSHLDQVYIRGSHIRFLIVPDML 75 >6QDV-f nrPDB Length = 72 Score = 35.2 bits (79), Expect = 0.010, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 18/37 (48%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 FL L + V ++LK G G L SV MN L + Sbjct: 7 FLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLAN 43 >5Z58-f nrPDB Length = 86 Score = 35.2 bits (79), Expect = 0.010, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 18/37 (48%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 FL L + V ++LK G G L SV MN L + Sbjct: 10 FLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLAN 46 >1M5Q-A nrPDB Length = 130 Score = 34.8 bits (78), Expect = 0.016, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 19/42 (45%) Query: 3 LVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVK 44 V L L +V + L NG G L +V Q+N +L + Sbjct: 1 FVAELNNLLGREVQVVLSNGEVYKGVLHAVDNQLNIVLANAS 42 >4EMH-A nrPDB Length = 105 Score = 34.8 bits (78), Expect = 0.016, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 36/101 (35%), Gaps = 26/101 (25%) Query: 1 MKLVNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGI 60 M + L + + +ELKNG T G L++ MN L +V T+P Sbjct: 15 MLPLTLLNATQGRPILVELKNGETFNGHLENCDNYMNLTLREVIRTMPD----------- 63 Query: 61 AMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 D L IRGN I+ + + D + Sbjct: 64 ---------------GDKFFRLPECYIRGNNIKYLRIQDEV 89 >6ID1-a nrPDB Length = 126 Score = 34.0 bits (76), Expect = 0.024, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 42/118 (35%), Gaps = 27/118 (22%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 + L + VT E G G L MN ++++ +T R Sbjct: 7 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGR------------ 54 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSGQ 121 +A L+ + IRG+ IR +ILPD L +L K N +G+ Sbjct: 55 ---------------VAQLEQVYIRGSKIRFLILPDMLKNAPMLKSMKNKNQGSGAGR 97 >6QDV-d nrPDB Length = 84 Score = 32.9 bits (73), Expect = 0.052, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 27/98 (27%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 + L + VT E G G L MN ++++ +T R Sbjct: 6 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGR------------ 53 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 +A L+ + IRG+ IR +ILPD L Sbjct: 54 ---------------VAQLEQVYIRGSKIRFLILPDML 76 >3PGG-A nrPDB Length = 121 Score = 32.5 bits (72), Expect = 0.061, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 36/98 (36%), Gaps = 15/98 (15%) Query: 9 KLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLT 68 K ++ + +K G L+ +N +L DV+ G ++ Sbjct: 35 KCIGNRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ------------EYGFKADEEDIS 82 Query: 69 GGQQPTASDNIASLQYINIRGNTIRQIIL---PDSLNL 103 GG + + L+ I + GN + ++ PDS N Sbjct: 83 GGNKKLKRVMVNRLETILLSGNNVAMLVPGGDPDSFNF 120 >5VSU-F nrPDB Length = 88 Score = 32.1 bits (71), Expect = 0.094, Method: Composition-based stats. Identities = 11/37 (29%), Positives = 19/37 (51%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 FL + + V ++L +G G L+S+ MN L+ Sbjct: 17 FLSDIIGKTVNVKLASGLLYSGRLESIDGFMNVALSS 53 >6BK8-g nrPDB Length = 101 Score = 31.7 bits (70), Expect = 0.13, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 37/98 (37%), Gaps = 27/98 (27%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 V L + + V++EL G T G L MN L DV T PQ + ++ Sbjct: 8 VKLLNEAQGHIVSLELTTGATYRGKLVESEDSMNVQLRDVIATEPQGAVTHMDQ------ 61 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSL 101 I +RG+ I+ I++PD L Sbjct: 62 ---------------------IFVRGSQIKFIVVPDLL 78 >1D3B-A nrPDB Length = 75 Score = 30.9 bits (68), Expect = 0.18, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 33/96 (34%), Gaps = 27/96 (28%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 + L + VT E G G L MN ++++ +T R Sbjct: 7 IKVLHEAEGHIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGR------------ 54 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPD 99 +A L+ + IRG IR +ILPD Sbjct: 55 ---------------VAQLEQVYIRGCKIRFLILPD 75 >6QX9-66 nrPDB Length = 80 Score = 29.8 bits (65), Expect = 0.39, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 17/36 (47%) Query: 6 FLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILT 41 FLK++ V ++L +G G L + MN L Sbjct: 11 FLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALE 46 >5MKL-A1 nrPDB Length = 87 Score = 29.8 bits (65), Expect = 0.42, Method: Composition-based stats. Identities = 14/36 (38%), Positives = 19/36 (52%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 LK N+ V ++LKNG G L+ MN +L D Sbjct: 12 LKTALNKIVLVKLKNGEEYVGRLEQSDGTMNLVLKD 47 >6AH0-d nrPDB Length = 76 Score = 29.8 bits (65), Expect = 0.43, Method: Composition-based stats. Identities = 11/36 (30%), Positives = 22/36 (61%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 LKK +++++++L G V G L+ P MN ++ + Sbjct: 9 LKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDE 44 >3JB9-J nrPDB Length = 77 Score = 29.4 bits (64), Expect = 0.52, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 LKK + QV ++L V+G L+ +N +L D Sbjct: 9 LKKYLDRQVFVQLNGSRKVYGVLRGYDIFLNIVLED 44 >4BIP-B nrPDB Length = 254 Score = 29.4 bits (64), Expect = 0.57, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 10/85 (11%) Query: 25 VWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQY 84 V GT+ + N P + + G + + Y+ P + + Q+ Sbjct: 131 VTGTVSGNTGHENTH--------PPYAATQPGATGFELTNPYILDAGIPLSQLLVCPHQW 182 Query: 85 INIRGNTIRQIILP--DSLNLDSLL 107 IN+R N I++P +S+ DS L Sbjct: 183 INLRTNNCATIVVPYINSVPFDSAL 207 >4N53-B nrPDB Length = 254 Score = 29.0 bits (63), Expect = 0.68, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 48 PQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP--DSLNLDS 105 P + + ++G + Y+ P + + Q+IN+R N II+P ++L DS Sbjct: 146 PPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDS 205 Query: 106 LL 107 L Sbjct: 206 AL 207 >3J91-0 nrPDB Length = 323 Score = 29.0 bits (63), Expect = 0.68, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 2/62 (3%) Query: 48 PQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP--DSLNLDS 105 P + + ++G + Y+ P + + Q+IN+R N II+P ++L DS Sbjct: 215 PPYKQTQPGADGFELQHPYVLDAGIPISQLTVCPHQWINLRTNNCATIIVPYINALPFDS 274 Query: 106 LL 107 L Sbjct: 275 AL 276 >1LJO-A nrPDB Length = 77 Score = 28.6 bits (62), Expect = 1.0, Method: Composition-based stats. Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 1/69 (1%) Query: 5 NFLKKLRNEQVTIELK-NGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 +K + + + +E+K + G L+ V MN LT+ + ++ L + Sbjct: 8 QMVKSMVGKIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAMECKGEEKVRSLGEIVLRGN 67 Query: 64 SLYLTGGQQ 72 ++ L Q+ Sbjct: 68 NVVLIQPQE 76 >3N37-A nrPDB Length = 319 Score = 28.3 bits (61), Expect = 1.4, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 10/120 (8%) Query: 17 IELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPTAS 76 + L N W TL V Q+ + T N G + Sbjct: 36 VPLSNDIPAWQTLTVVEQQLTMRV----FTGLTLLDTLQNVIGAPSLMPDALTPHEEAVL 91 Query: 77 DNIASLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRSGQI------ANDPSKKR 130 NI+ ++ ++ R + L + ++D+ ++ L+R QI +DP KK+ Sbjct: 92 SNISFMEAVHARSYSSIFSTLCQTKDVDAAYAWSEENAPLQRKAQIIQQHYRGDDPLKKK 151 >3GV2-A nrPDB Length = 342 Score = 27.9 bits (60), Expect = 1.7, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 12/88 (13%) Query: 5 NFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMAS 64 F K LR EQ + E+KN T +Q+ +P IL L + M + Sbjct: 167 RFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKA---------LGPGATLEEMMTA 217 Query: 65 LYLTGGQQP---TASDNIASLQYINIRG 89 GG +P +A + S++ I G Sbjct: 218 CQGVGGTRPELMSAQSAVGSIETIGFPG 245 >5XJX-C nrPDB Length = 433 Score = 27.9 bits (60), Expect = 1.7, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 1/74 (1%) Query: 28 TLQSVSPQMNAILTDVKLTLPQPR-LNKLNSNGIAMASLYLTGGQQPTASDNIASLQYIN 86 TL S + L+ ++T P P +N+LN + S G P++ + SLQ + Sbjct: 221 TLTSCGSLIKIDLSRNRVTGPIPESINRLNQLVLLDLSYNRLSGPFPSSLQGLNSLQALM 280 Query: 87 IRGNTIRQIILPDS 100 ++GNT +P++ Sbjct: 281 LKGNTKFSTTIPEN 294 >5XS7-B nrPDB Length = 256 Score = 27.9 bits (60), Expect = 1.8, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 48 PQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP--DSLNLDS 105 P +G Y+ P + + Q+IN+R N II+P ++L DS Sbjct: 148 PDFAHTNPGKDGQEFRDPYVLDAGIPLSQALVFPHQWINLRTNNCATIIMPYVNALPFDS 207 Query: 106 LL 107 L Sbjct: 208 AL 209 >5XS5-B nrPDB Length = 325 Score = 27.9 bits (60), Expect = 1.8, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 2/62 (3%) Query: 48 PQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP--DSLNLDS 105 P +G Y+ P + + Q+IN+R N II+P ++L DS Sbjct: 217 PDFAHTNPGKDGQEFRDPYVLDAGIPLSQALVFPHQWINLRTNNCATIIMPYVNALPFDS 276 Query: 106 LL 107 L Sbjct: 277 AL 278 >5NEW-A nrPDB Length = 102 Score = 27.5 bits (59), Expect = 2.0, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 2/83 (2%) Query: 6 FLKKLRNEQV--TIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 FL LR E+V +I L NG + G ++S + + V + + ++ + + Sbjct: 11 FLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVSH 70 Query: 64 SLYLTGGQQPTASDNIASLQYIN 86 GG + + +S Q + Sbjct: 71 HSNNAGGGTSSNYHHGSSAQNTS 93 >5YHQ-B nrPDB Length = 325 Score = 27.5 bits (59), Expect = 2.2, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 2/62 (3%) Query: 48 PQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQYINIRGNTIRQIILP--DSLNLDS 105 P G Y+ P + + Q+IN+R N II+P ++L DS Sbjct: 217 PDFAHTNPGKEGQVFRDPYVLDAGIPLSQALVFPHQWINLRTNNCATIIMPYVNALPFDS 276 Query: 106 LL 107 L Sbjct: 277 AL 278 >4XQ3-A nrPDB Length = 91 Score = 27.5 bits (59), Expect = 2.2, Method: Composition-based stats. Identities = 12/36 (33%), Positives = 19/36 (52%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 L+ N V ++LK+G+ G L+ MN +L D Sbjct: 16 LRTAINRIVLVKLKDGSEYIGKLEQTDGTMNLVLRD 51 >3SWN-C nrPDB Length = 117 Score = 27.5 bits (59), Expect = 2.2, Method: Composition-based stats. Identities = 14/63 (22%), Positives = 27/63 (42%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLY 66 L + +++++ G + G L+ MN +L DV+ L P KL + + Sbjct: 32 LSRYQDQRIQATFTGGRQITGILKGFDQLMNLVLDDVEEQLRNPEDGKLTGAIRKLGLVV 91 Query: 67 LTG 69 + G Sbjct: 92 VRG 94 >5C9A-B nrPDB Length = 323 Score = 27.1 bits (58), Expect = 3.2, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 10/85 (11%) Query: 25 VWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQY 84 V GT+ + N+ P + G + Y+ P + + Q+ Sbjct: 200 VLGTIAGGTGNENSH--------PPYATTQPGQVGAVLTHPYVLDAGIPLSQLTVCPHQW 251 Query: 85 INIRGNTIRQIILP--DSLNLDSLL 107 IN+R N II+P +++ DS L Sbjct: 252 INLRTNNCATIIVPYMNTVPFDSAL 276 >5C4W-B nrPDB Length = 254 Score = 27.1 bits (58), Expect = 3.2, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 33/85 (38%), Gaps = 10/85 (11%) Query: 25 VWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMASLYLTGGQQPTASDNIASLQY 84 V GT+ + N+ P + G + Y+ P + + Q+ Sbjct: 131 VLGTIAGGTGNENSH--------PPYATTQPGQVGAVLTHPYVLDAGIPLSQLTVCPHQW 182 Query: 85 INIRGNTIRQIILP--DSLNLDSLL 107 IN+R N II+P +++ DS L Sbjct: 183 INLRTNNCATIIVPYMNTVPFDSAL 207 >4Y1P-A nrPDB Length = 337 Score = 26.7 bits (57), Expect = 3.5, Method: Composition-based stats. Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 1/67 (1%) Query: 81 SLQYINIRGNTIRQIILPDSLNLDSLLVDQKQLNSLRRS-GQIANDPSKKRRRDFGAPAN 139 ++YI + + D+L DSL V +K L+ G+ A D K R + AN Sbjct: 35 PIEYIEVEAGDTTKNKFGDALPKDSLRVIEKADMILKGPVGETAADVVVKLRLMYDLYAN 94 Query: 140 KRPRRGL 146 RP + L Sbjct: 95 LRPAKSL 101 >1Q1R-A nrPDB Length = 431 Score = 26.7 bits (57), Expect = 3.8, Method: Composition-based stats. Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 9/139 (6%) Query: 4 VNFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 V+ + + + ++++ GT V G S Q +T V L GI + Sbjct: 193 VSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQ---KVTAVLCEDGTRLPADLVIAGIGLI 249 Query: 64 SLYLTGGQQPTASDNIASLQYINIRGNTIRQIILPDSLNLDSLLVD-----QKQLNSLRR 118 DN + +++ + + + D S L D + N+L + Sbjct: 250 PNCELASAAGLQVDN-GIVINEHMQTSDPLIMAVGDCARFHSQLYDRWVRIESVPNALEQ 308 Query: 119 SGQIANDPSKKRRRDFGAP 137 + +IA K RD AP Sbjct: 309 ARKIAAILCGKVPRDEAAP 327 >1U1T-A nrPDB Length = 82 Score = 26.3 bits (56), Expect = 5.2, Method: Composition-based stats. Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Query: 6 FLKKLRNEQV--TIELKNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKLNSNGIAMA 63 +L LR E+V +I L NG + G ++S + +K T+ Q S + Sbjct: 11 YLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVIL----LKNTVSQMVYKHAISTVVPSR 66 Query: 64 SLYLTGGQQPTASDN 78 + L G QP N Sbjct: 67 PVRLPSGDQPAEPGN 81 >2LF4-A nrPDB Length = 240 Score = 25.9 bits (55), Expect = 6.4, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 5 NFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDV 43 F K LR EQ + E+KN T +Q+ +P IL + Sbjct: 168 RFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKAL 206 >2JYL-A nrPDB Length = 105 Score = 25.9 bits (55), Expect = 7.0, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%) Query: 5 NFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDV 43 F K LR EQ + E+KN T +Q+ +P IL + Sbjct: 41 RFYKTLRAEQASQEVKNAATETLLVQNANPDCKTILKAL 79 >5NGM-Ai nrPDB Length = 132 Score = 25.6 bits (54), Expect = 7.5, Method: Composition-based stats. Identities = 13/36 (36%), Positives = 19/36 (52%) Query: 106 LLVDQKQLNSLRRSGQIANDPSKKRRRDFGAPANKR 141 L D + SL+R+G + DP K R+ G A +R Sbjct: 90 LEADPEYRGSLKRAGLLTRDPRMKERKKPGLKAARR 125 >3JB9-H nrPDB Length = 84 Score = 25.6 bits (54), Expect = 7.6, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 4/56 (7%) Query: 4 VNFLKKLRNEQVTIEL----KNGTTVWGTLQSVSPQMNAILTDVKLTLPQPRLNKL 55 +NF+ KL + + + + + G ++ MN +L D + +L Sbjct: 13 INFIFKLLQQHTPVSIWLFEQTDIRLQGQIRGFDEFMNIVLDDAVQVDAKNNKREL 68 >5O2U-A nrPDB Length = 500 Score = 25.6 bits (54), Expect = 8.5, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 31/86 (36%), Gaps = 2/86 (2%) Query: 5 NFLKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTDV--KLTLPQPRLNKLNSNGIAM 62 F K LR EQ + E+KN T +Q+ +P IL + TL + G Sbjct: 299 RFYKTLRAEQASQEVKNWMTETLLVQNANPDCKTILKALGPGATLEEMMTACQGVGGPGH 358 Query: 63 ASLYLTGGQQPTASDNIASLQYINIR 88 + L + +Q N R Sbjct: 359 KARVLAEAMSQVTNPATIMIQKGNFR 384 >5LJ3-g nrPDB Length = 77 Score = 25.6 bits (54), Expect = 9.1, Method: Composition-based stats. Identities = 9/36 (25%), Positives = 18/36 (50%) Query: 7 LKKLRNEQVTIELKNGTTVWGTLQSVSPQMNAILTD 42 LKK ++++ + + V G L+ +N +L D Sbjct: 7 LKKYMDKKILLNINGSRKVAGILRGYDIFLNVVLDD 42 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.319 0.121 0.314 Lambda K H 0.267 0.0371 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,718,697 Number of Sequences: 36641 Number of extensions: 151295 Number of successful extensions: 452 Number of sequences better than 10.0: 56 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 19 Number of HSP's that attempted gapping in prelim test: 359 Number of HSP's gapped (non-prelim): 98 length of query: 146 length of database: 10,336,785 effective HSP length: 88 effective length of query: 58 effective length of database: 7,112,377 effective search space: 412517866 effective search space used: 412517866 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 54 (25.6 bits)