BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q01405 (765 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 2NUP-A nrPDB 1589 0.0 2QTV-A nrPDB 764 0.0 3EH1-A nrPDB 82 8e-16 3EH2-A nrPDB 72 1e-12 5KYW-B nrPDB 69 1e-11 2NUP-B nrPDB 66 7e-11 1M2V-B nrPDB 42 0.001 1PD0-A nrPDB 41 0.002 1P6P-A nrPDB 32 1.2 2BKJ-A nrPDB 30 5.4 1V9D-A nrPDB 29 8.3 >2NUP-A nrPDB Length = 769 Score = 1589 bits (4115), Expect = 0.0, Method: Compositional matrix adjust. Identities = 758/765 (99%), Positives = 764/765 (99%) Query: 1 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL 60 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL Sbjct: 5 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL 64 Query: 61 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYV 120 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPP+YAGISELNQPAELLPQFSSIEYV Sbjct: 65 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYV 124 Query: 121 VLRGPQMPLIFLYVVDTCIEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC 180 VLRGPQMPLIFLYVVDTC+EDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC Sbjct: 125 VLRGPQMPLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC 184 Query: 181 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL 240 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL Sbjct: 185 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL 244 Query: 241 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM 300 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM Sbjct: 245 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM 304 Query: 301 VVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM 360 VVGDELKTPIRSWHDI+KDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM Sbjct: 305 VVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM 364 Query: 361 KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKTSREIKISGAI 420 KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKD+HGQFKMGFGGTLEIKTSREIKISGAI Sbjct: 365 KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREIKISGAI 424 Query: 421 GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAVQ 480 GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGA+Q Sbjct: 425 GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAIQ 484 Query: 481 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP 540 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP Sbjct: 485 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP 544 Query: 541 DVLRWLDRQLIRLCQKFGEYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES 600 DVLRWLDRQLIRLCQKFGEYHKDDP+SFRFSETFSLYPQFMFHLRRS FLQVFNNSPDES Sbjct: 545 DVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSFLQVFNNSPDES 604 Query: 601 SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH 660 SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH Sbjct: 605 SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH 664 Query: 661 GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS 720 GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS Sbjct: 665 GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS 724 Query: 721 KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 765 KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA Sbjct: 725 KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 769 >2QTV-A nrPDB Length = 772 Score = 764 bits (1972), Expect = 0.0, Method: Compositional matrix adjust. Identities = 383/773 (49%), Positives = 515/773 (66%), Gaps = 22/773 (2%) Query: 8 IQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCR 67 + NE+ +GVRF+WNV+PS+R +A VVPV L+TPLKE +L Y PV+CS C+ Sbjct: 7 FETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCK 66 Query: 68 AVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYVVLRGPQM 127 ++LNP C +D R W+C C RN PP Y +S+ N P EL Q ++IEY+ + + Sbjct: 67 SILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLEL--QSTTIEYITNKPVTV 124 Query: 128 PLIFLYVVDTCIEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSY 187 P IF +VVD E E+L +LKES+ SLSLLPP AL+GLIT+G +VQ+H+L E I + Sbjct: 125 PPIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCN 184 Query: 188 VFRGTKDLSAKQLQEMLGLSKV--PVTQATRGPQVQQ---PPPSNRFLQPVQKIDMNLTD 242 VFRG ++ + L EML K P A+ P P NRF P+++++ L Sbjct: 185 VFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQ 244 Query: 243 LLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVV 302 LL L D W VP G RPLR++G AL+IA LL+ + N ARI++F GP T PG++V Sbjct: 245 LLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIV 304 Query: 303 GDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKC 362 ELK P+RS HDI+ D+A++ KK K + +A R A GH +DI+A DQ G+ EMK Sbjct: 305 NSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQ 364 Query: 363 CPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKTSREIKISGAIGP 422 + TGG +++ D+F+T++FKQ++ R+F KD G KM F G + +KTS+++K+ G IG Sbjct: 365 LTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGH 424 Query: 423 CVSLN-SKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQ--HNAPIPQGGRGA- 478 ++ + +SE+EIG G T WK+ LSP + AI+FE+ N ++ P+ A Sbjct: 425 ASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSAD 484 Query: 479 ------VQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIY 532 QF+T YQHSSG RIRVTT+A T IAASFDQEAAA+LMAR+A++ Sbjct: 485 RPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASFDQEAAAVLMARIAVH 542 Query: 533 RAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQV 592 +AET++G DV+RWLDR LI+LCQK+ +Y+KDDP SFR + FSLYPQF ++LRRS FL V Sbjct: 543 KAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSV 602 Query: 593 FNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDT 652 FNNSPDE+++YRH F R+D T SLIMIQP L ++S P+PVLLDS S+ + ILL+DT Sbjct: 603 FNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDT 662 Query: 653 FFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGG 712 FF ILIYHGE IAQWRK+GYQD P+Y +F+ LL+ P +A E+L RFP+PR+IDTE GG Sbjct: 663 FFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGG 722 Query: 713 SQARFLLSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 765 SQARFLLSK+NPS + +M G +LTDDVSLQ FM HL+++AVS A Sbjct: 723 SQARFLLSKLNPSDNYQDMARGG---STIVLTDDVSLQNFMTHLQQVAVSGQA 772 >3EH1-A nrPDB Length = 751 Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust. Identities = 129/636 (20%), Positives = 242/636 (38%), Gaps = 97/636 (15%) Query: 15 DGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLC 74 D R + P ++ + +P+ L P ++ LP I ++ R+ CR +NP Sbjct: 41 DSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRS-CRTYINPFV 99 Query: 75 Q-VDYRAKLWACNFCYQRNQFP------PTYAGISELNQPAELLPQFSSIEYV-----VL 122 +D R W CN CY+ N P P E ++ E+ Q S++E++ +L Sbjct: 100 SFIDQRR--WKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEV--QNSTVEFIASSDYML 155 Query: 123 RGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLP--PTALVGLITFGRMVQVHE 177 R PQ P ++L+V+D +E L L +S+ +L LP +G +TF + + Sbjct: 156 RPPQ-PAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIHFYN 214 Query: 178 LGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKID 237 L EG+S+ +ML +S + V P P + + + + Sbjct: 215 LQ-EGLSQP---------------QMLIVSDI--------DDVFLPTPDSLLVNLYESKE 250 Query: 238 MNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQG 297 + + DLL L P + + G AL A L+ TG R+ +F + G Sbjct: 251 L-IKDLLNAL---PNMFTNTRETHSALGPALQAAFKLMS----PTGGRVSVFQTQLPSLG 302 Query: 298 PGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGL 357 G++ E S ++ ++ T ++ LA + +D++ + + L Sbjct: 303 AGLLQSREDPNQRSSTKVVQ-----HLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDL 357 Query: 358 LEMKCCPNLTGGYMVMGDSFN-------TSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKT 410 + C + G + SF+ ++ +R T+ K+GF + I+ Sbjct: 358 ASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLKRYLTR------KIGFEAVMRIRC 411 Query: 411 SREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAP 470 ++ + + G T + ++P A+ + Sbjct: 412 TKGLSMHTFHG---------------NFFVRSTDLLSLANINPDAGFAVQLSI----EES 452 Query: 471 IPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLA 530 + Q Y S G+RRIRV T+ + + ++ A D +AA L+A +A Sbjct: 453 LTDTSLVCFQTALLYTSSKGERRIRVHTLC---LPVVSSLADVYAGVDVQAAICLLANMA 509 Query: 531 IYRAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPNSFRFS-ETFSLYPQFMFH-LRRSP 588 + R+ + D L ++ +G + +S + + L+P ++ L++ Sbjct: 510 VDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLKQKA 569 Query: 589 FLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILY 624 F + D+ Y Q L + MI P LY Sbjct: 570 FRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLY 605 >3EH2-A nrPDB Length = 766 Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 141/693 (20%), Positives = 262/693 (37%), Gaps = 117/693 (16%) Query: 20 SWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL----------CSRTTCRAV 69 S+N+ P + A + VP+AA+ PL LPP + P + C+R C+A Sbjct: 50 SYNI-PCTSDMAKQAQVPLAAVIKPLAR---LPPEEASPYVVDHGESGPLRCNR--CKAY 103 Query: 70 LNPLCQVDYRAKLWACNFCYQRNQFPPTY--------AGISELNQPAELLPQF---SSIE 118 + P Q + + C FC N PP Y + ++P L + ++++ Sbjct: 104 MCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVD 163 Query: 119 YVVLRGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLP-------PTALVGLIT 168 Y P F++++D I ++ L E ++ L LP VG +T Sbjct: 164 YCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVT 223 Query: 169 FGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNR 228 + +++ + + L+ Q+ + ++ + V P + Sbjct: 224 YNKVLHFYNV-------------KSSLAQPQMMVVSDVADMFV------------PLLDG 258 Query: 229 FLQPVQKIDMNLTDLLG---ELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGAR 285 FL V + +T LL E+ D P+ +G+ A+ EC G Sbjct: 259 FLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGME---ALKAAECA----GKL 311 Query: 286 IMMFIGGPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVI 345 + P + PG + + + I + D EK + T ++ LA G + Sbjct: 312 FLFHTSLPIAEAPGKLKNRDDRKLINT--DKEK---TLFQPQTGAYQTLAKECVAQGCCV 366 Query: 346 DIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQFKMGFGGT 405 D++ + + P LTGG + SF ++ F +D+ Q +GF Sbjct: 367 DLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSDLRRDV--QKVVGFDAV 424 Query: 406 LEIKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVN 465 + ++TS I+ G N T ++ GL T+ + F Sbjct: 425 MRVRTSTGIRAVDFFGAFYMSN---------------TTDVELAGLDGDKTVTVEF---- 465 Query: 466 QHNAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAIL 525 +H+ + + +Q Y +GQRR+R+ +A N TQ+ ++ + + + Sbjct: 466 KHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCC---TQLADLYRNCETDTLINY 522 Query: 526 MARLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEYHKD--DPNS---FRFSETFSLYPQF 580 MA+ A YR +R D + + Q Y K+ P+S E L P + Sbjct: 523 MAKFA-YRGVLNSPVKAVR--DTLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVY 579 Query: 581 MFHLRRSPFLQVFNN-SPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPE-----P 634 + + +S LQ + D+ +Y R D+T++ + P L + S P E P Sbjct: 580 LNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKS-PVESTTEPP 638 Query: 635 VLLDSSSILAD-RILLMDTFFQILIYHGETIAQ 666 + S L++ I L++ + ++ G ++ Q Sbjct: 639 AVRASEERLSNGDIYLLENGLNLFLWVGASVQQ 671 >5KYW-B nrPDB Length = 770 Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 125/650 (19%), Positives = 243/650 (37%), Gaps = 99/650 (15%) Query: 9 QQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERP-DLPPI------QYEPVLC 61 Q N +R + +P + A + +P+AA+ P P + P+ + PV C Sbjct: 42 QGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRC 101 Query: 62 SRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTY--------AGISELNQPAELLPQ 113 +R C+A + P Q + + C FC N PP Y + +P L Sbjct: 102 NR--CKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGS 159 Query: 114 F---SSIEYVVLRGPQMPLIFLYVVDTC---IEDEDLQALKESMQMSLSLLP-------P 160 + ++++Y P P F++++D I++ ++ + E ++ L +P Sbjct: 160 YEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETS 219 Query: 161 TALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQV 220 VG IT+ +++ + F +L+ Q+ + + +V V Sbjct: 220 AIRVGFITYNKVL-------------HFFNVKSNLAQPQMMVVTDVGEVFV--------- 257 Query: 221 QQPPPSNRFL---QPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLEC 277 P + FL Q Q + NL D + ++ D P+ +G+ A+ +C Sbjct: 258 ---PLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGME---ALKAADC 311 Query: 278 TFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANR 337 G + P + PG + + K + + D EK + T +++LA Sbjct: 312 ----PGKLFIFHSSLPTAEAPGKLKNRDDKKLVNT--DKEK---ILFQPQTNVYDSLAKD 362 Query: 338 AATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQ 397 G + ++ + + P LTGG + ++F L +Q F DI Sbjct: 363 CVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEK- 421 Query: 398 FKMGFGGTLEIKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTL 457 K+GF + ++TS + + G + N+ ++ + T ++K Sbjct: 422 -KIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFK---------- 470 Query: 458 AIYFEVVNQHNAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASF 517 H+ + + +Q Y SGQRR+R+ + N + +Q+ ++ S Sbjct: 471 ---------HDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCS---SQLADLYKSC 518 Query: 518 DQEAAAILMARLAIYRAETEEGPDVLR-WLDRQLIRL--CQKFGEYHKDDPNSFRFSETF 574 + +A A+ A ++A + V+R L Q + C + + ++ Sbjct: 519 ETDALINFFAKSA-FKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSM 577 Query: 575 SLYPQFM-FHLRRSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPIL 623 + P +M L+ L S DE +Y R M + S + P L Sbjct: 578 KVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQL 627 >2NUP-B nrPDB Length = 753 Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 144/688 (20%), Positives = 255/688 (37%), Gaps = 111/688 (16%) Query: 18 RFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVLNPLCQ-V 76 R + P ++ + +P+ L P K+ LP + ++ R+ CR +NP + Sbjct: 47 RCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRS-CRTYINPFVSFL 105 Query: 77 DYRAKLWACNFCYQRNQFP------PTYAGISELNQPAELLPQFSSIEYV-----VLRGP 125 D R W CN CY+ N P P E ++ E+ Q ++IE++ +LR P Sbjct: 106 DQRR--WKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEV--QNATIEFMAPSEYMLRPP 161 Query: 126 QMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLPPTAL--VGLITFGRMVQVHELGC 180 Q P ++L+V D +E L ++ +S+ +L LLP +G ITF + + L Sbjct: 162 QPP-VYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYGLQ- 219 Query: 181 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL 240 E +S+ +ML +S + V P P N + + ++ + Sbjct: 220 ESLSQP---------------QMLIVSDI--------EDVFIPMPENLLVNLNESKEL-V 255 Query: 241 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM 300 DLL L P + + G AL A L+ TG R+ +F T G G Sbjct: 256 QDLLKTL---PQMFTKTLETQSALGPALQAAFKLMS----PTGGRMSVFQTQLPTLGVGA 308 Query: 301 VVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM 360 + E S DI ++ T ++ LA + +D++ + + L + Sbjct: 309 LKPREEPNHRSSAKDI------HMTPSTDFYKKLALDCSGQQVAVDLFLLSGQYSDLASL 362 Query: 361 KCCPNLTGGYMVMGDSFN-------TSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKTSRE 413 C + G + S++ ++ QR T+ K+GF + I+ ++ Sbjct: 363 GCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTR------KIGFEAVMRIRCTKG 416 Query: 414 IKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQ 473 + I G T + ++P A+ V + Sbjct: 417 LSIHTFHG---------------NFFVRSTDLLSLPNVNPDAGYAVQMSV----EESLTD 457 Query: 474 GGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYR 533 + Q Y S G+RRIRV T+ + + ++ D +A + L+A +A+ R Sbjct: 458 TQLVSFQSALLYTSSKGERRIRVHTLC---LPVVSTLNDVFLGADVQAISGLLANMAVDR 514 Query: 534 AETEEGPDVLRWLDRQLIRLCQKF-GEYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQV 592 + T D L +I + + + L+P F+ L + Q Sbjct: 515 SMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQT 574 Query: 593 FNNSP-DESSYYRHHFMRQDLTQSLIMIQPILY---------AYSFSG---PPEPVL-LD 638 N+ DE + Q L ++ P LY A + S P P+L L Sbjct: 575 GTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLS 634 Query: 639 SSSILADRILLMDTFFQILIYHGETIAQ 666 + D LMD ++++ G+ Q Sbjct: 635 VEKLSRDGAFLMDAGSVLMLWVGKNCTQ 662 >1M2V-B nrPDB Length = 926 Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 11 NEERDGVRFSWNVWPSSRLEATRMVVPVAALFTP---LKERPDLPPIQYEPVLCSRTTCR 67 N D +R + N P + + +P + P L + D PP+ + ++ CR Sbjct: 176 NASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRCR 235 Query: 68 AVLNPLCQVDYRAKLWACNFCYQRNQFP 95 + +NP + + W CNFC N P Sbjct: 236 SYMNPFVTFIEQGRRWRCNFCRLANDVP 263 >1PD0-A nrPDB Length = 810 Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Query: 11 NEERDGVRFSWNVWPSSRLEATRMVVPVAALFTP---LKERPDLPPIQYEPVLCSRTTCR 67 N D +R + N P + + +P + P L + D PP+ + ++ CR Sbjct: 60 NASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRCR 119 Query: 68 AVLNPLCQVDYRAKLWACNFCYQRNQFP 95 + +NP + + W CNFC N P Sbjct: 120 SYMNPFVTFIEQGRRWRCNFCRLANDVP 147 >1P6P-A nrPDB Length = 125 Score = 31.6 bits (70), Expect = 1.2, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 6/61 (9%) Query: 678 YENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLSKVNPSQTHNNMYAWGQE 737 YENF + P +D ++ P+ I+ E G++ F+++ P QTH+N + G+E Sbjct: 14 YENFLRTVGLP-EDIIKVAKDVNPV---IEIEQNGNE--FVVTSKTPKQTHSNSFTVGKE 67 Query: 738 S 738 S Sbjct: 68 S 68 >2BKJ-A nrPDB Length = 240 Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust. Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%) Query: 163 LVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSK-------VPVTQAT 215 L+G + G M Q L E + V+ G SA Q+ E+LGL + + + Sbjct: 102 LIGAVDSGIMAQNCLLAAESMGLGGVYIGGLRNSAAQVDELLGLPENSAVLFGMCLGHPD 161 Query: 216 RGPQVQQPPPSNRFLQPVQKIDMNLTDL 243 + P+V+ P++ + Q ++NL D+ Sbjct: 162 QNPEVKPRLPAHVVVHENQYQELNLDDI 189 >1V9D-A nrPDB Length = 340 Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust. Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 7/94 (7%) Query: 499 IARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGPDVLRWLDRQLIRLCQKFG 558 + + AD + +QN A+ D++ + ++ + + +E + LR + + L ++ G Sbjct: 222 MKKQIADVERDVQNFPAATDEKDKFV--EKMTSFVKDAQEQYNKLRMMHSNMETLYKELG 279 Query: 559 EYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQV 592 +Y DP E F H R+ FLQ Sbjct: 280 DYFVFDPKKLSVEEFF-----MDLHNFRNMFLQA 308 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 2NUP-A nrPDB 1180 0.0 2QTV-A nrPDB 995 0.0 3EH2-A nrPDB 657 0.0 5KYW-B nrPDB 646 0.0 3EH1-A nrPDB 612 e-175 2NUP-B nrPDB 611 e-175 1PD0-A nrPDB 310 1e-84 1M2V-B nrPDB 304 1e-82 Sequences not found previously or not previously below threshold: 3FFN-A nrPDB 32 0.72 2FH4-A nrPDB 32 0.72 1NPH-A nrPDB 32 0.72 1TDH-A nrPDB 31 2.0 5ITU-A nrPDB 31 2.4 1Q7Q-A nrPDB 30 3.3 CONVERGED! >2NUP-A nrPDB Length = 769 Score = 1180 bits (3052), Expect = 0.0, Method: Composition-based stats. Identities = 758/765 (99%), Positives = 764/765 (99%) Query: 1 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL 60 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL Sbjct: 5 MTTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVL 64 Query: 61 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYV 120 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPP+YAGISELNQPAELLPQFSSIEYV Sbjct: 65 CSRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPSYAGISELNQPAELLPQFSSIEYV 124 Query: 121 VLRGPQMPLIFLYVVDTCIEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC 180 VLRGPQMPLIFLYVVDTC+EDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC Sbjct: 125 VLRGPQMPLIFLYVVDTCMEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGC 184 Query: 181 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL 240 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL Sbjct: 185 EGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMNL 244 Query: 241 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM 300 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM Sbjct: 245 TDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGM 304 Query: 301 VVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM 360 VVGDELKTPIRSWHDI+KDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM Sbjct: 305 VVGDELKTPIRSWHDIDKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEM 364 Query: 361 KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKTSREIKISGAI 420 KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKD+HGQFKMGFGGTLEIKTSREIKISGAI Sbjct: 365 KCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDMHGQFKMGFGGTLEIKTSREIKISGAI 424 Query: 421 GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAVQ 480 GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGA+Q Sbjct: 425 GPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNAPIPQGGRGAIQ 484 Query: 481 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP 540 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP Sbjct: 485 FVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIYRAETEEGP 544 Query: 541 DVLRWLDRQLIRLCQKFGEYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQVFNNSPDES 600 DVLRWLDRQLIRLCQKFGEYHKDDP+SFRFSETFSLYPQFMFHLRRS FLQVFNNSPDES Sbjct: 545 DVLRWLDRQLIRLCQKFGEYHKDDPSSFRFSETFSLYPQFMFHLRRSSFLQVFNNSPDES 604 Query: 601 SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH 660 SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH Sbjct: 605 SYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDTFFQILIYH 664 Query: 661 GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS 720 GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS Sbjct: 665 GETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGGSQARFLLS 724 Query: 721 KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 765 KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA Sbjct: 725 KVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 769 >2QTV-A nrPDB Length = 772 Score = 995 bits (2572), Expect = 0.0, Method: Composition-based stats. Identities = 383/773 (49%), Positives = 515/773 (66%), Gaps = 22/773 (2%) Query: 8 IQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCR 67 + NE+ +GVRF+WNV+PS+R +A VVPV L+TPLKE +L Y PV+CS C+ Sbjct: 7 FETNEDINGVRFTWNVFPSTRSDANSNVVPVGCLYTPLKEYDELNVAPYNPVVCSGPHCK 66 Query: 68 AVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQFSSIEYVVLRGPQM 127 ++LNP C +D R W+C C RN PP Y +S+ N P EL Q ++IEY+ + + Sbjct: 67 SILNPYCVIDPRNSSWSCPICNSRNHLPPQYTNLSQENMPLEL--QSTTIEYITNKPVTV 124 Query: 128 PLIFLYVVDTCIEDEDLQALKESMQMSLSLLPPTALVGLITFGRMVQVHELGCEGISKSY 187 P IF +VVD E E+L +LKES+ SLSLLPP AL+GLIT+G +VQ+H+L E I + Sbjct: 125 PPIFFFVVDLTSETENLDSLKESIITSLSLLPPNALIGLITYGNVVQLHDLSSETIDRCN 184 Query: 188 VFRGTKDLSAKQLQEMLGLSKV--PVTQATRGPQVQQ---PPPSNRFLQPVQKIDMNLTD 242 VFRG ++ + L EML K P A+ P P NRF P+++++ L Sbjct: 185 VFRGDREYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQ 244 Query: 243 LLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPATQGPGMVV 302 LL L D W VP G RPLR++G AL+IA LL+ + N ARI++F GP T PG++V Sbjct: 245 LLENLSPDQWSVPAGHRPLRATGSALNIASLLLQGCYKNIPARIILFASGPGTVAPGLIV 304 Query: 303 GDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQTGLLEMKC 362 ELK P+RS HDI+ D+A++ KK K + +A R A GH +DI+A DQ G+ EMK Sbjct: 305 NSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRVAANGHTVDIFAGCYDQIGMSEMKQ 364 Query: 363 CPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQFKMGFGGTLEIKTSREIKISGAIGP 422 + TGG +++ D+F+T++FKQ++ R+F KD G KM F G + +KTS+++K+ G IG Sbjct: 365 LTDSTGGVLLLTDAFSTAIFKQSYLRLFAKDEEGYLKMAFNGNMAVKTSKDLKVQGLIGH 424 Query: 423 CVSLN-SKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQ--HNAPIPQGGRGA- 478 ++ + +SE+EIG G T WK+ LSP + AI+FE+ N ++ P+ A Sbjct: 425 ASAVKKTDANNISESEIGIGATSTWKMASLSPYHSYAIFFEIANTAANSNPMMSAPGSAD 484 Query: 479 ------VQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARLAIY 532 QF+T YQHSSG RIRVTT+A T IAASFDQEAAA+LMAR+A++ Sbjct: 485 RPHLAYTQFITTYQHSSGTNRIRVTTVANQLLPFGTPA--IAASFDQEAAAVLMARIAVH 542 Query: 533 RAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPNSFRFSETFSLYPQFMFHLRRSPFLQV 592 +AET++G DV+RWLDR LI+LCQK+ +Y+KDDP SFR + FSLYPQF ++LRRS FL V Sbjct: 543 KAETDDGADVIRWLDRTLIKLCQKYADYNKDDPQSFRLAPNFSLYPQFTYYLRRSQFLSV 602 Query: 593 FNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGPPEPVLLDSSSILADRILLMDT 652 FNNSPDE+++YRH F R+D T SLIMIQP L ++S P+PVLLDS S+ + ILL+DT Sbjct: 603 FNNSPDETAFYRHIFTREDTTNSLIMIQPTLTSFSMEDDPQPVLLDSISVKPNTILLLDT 662 Query: 653 FFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQAPVDDAQEILHSRFPMPRYIDTEHGG 712 FF ILIYHGE IAQWRK+GYQD P+Y +F+ LL+ P +A E+L RFP+PR+IDTE GG Sbjct: 663 FFFILIYHGEQIAQWRKAGYQDDPQYADFKALLEEPKLEAAELLVDRFPLPRFIDTEAGG 722 Query: 713 SQARFLLSKVNPSQTHNNMYAWGQESGAPILTDDVSLQVFMDHLKKLAVSSAA 765 SQARFLLSK+NPS + +M G +LTDDVSLQ FM HL+++AVS A Sbjct: 723 SQARFLLSKLNPSDNYQDMARGG---STIVLTDDVSLQNFMTHLQQVAVSGQA 772 >3EH2-A nrPDB Length = 766 Score = 657 bits (1694), Expect = 0.0, Method: Composition-based stats. Identities = 138/708 (19%), Positives = 259/708 (36%), Gaps = 110/708 (15%) Query: 2 TTYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLC 61 T +L Q N +R + P + A + VP+AA+ PL LPP + P + Sbjct: 31 TNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLAR---LPPEEASPYVV 87 Query: 62 --------SRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTY--------AGISELN 105 C+A + P Q + + C FC N PP Y + + Sbjct: 88 DHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYD 147 Query: 106 QPAELLPQF---SSIEYVVLRGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLP 159 +P L + ++++Y P F++++D I ++ L E ++ L LP Sbjct: 148 RPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLP 207 Query: 160 -------PTALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVT 212 VG +T+ +++ + + L+ Q+ + ++ + V Sbjct: 208 REGGAEESAIRVGFVTYNKVLHFYNV-------------KSSLAQPQMMVVSDVADMFV- 253 Query: 213 QATRGPQVQQPPPSNRFLQPVQKIDMNLTDLL---GELQRDPWPVPQGKRPLRSSGVALS 269 P + FL V + +T LL E+ D P+ +G+ Sbjct: 254 -----------PLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGME-- 300 Query: 270 IAVGLLECTFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTK 329 A+ EC G + P + PG + + + I + D EK + T Sbjct: 301 -ALKAAECA----GKLFLFHTSLPIAEAPGKLKNRDDRKLINT--DKEK---TLFQPQTG 350 Query: 330 HFEALANRAATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRV 389 ++ LA G +D++ + + P LTGG + SF ++ F Sbjct: 351 AYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSD 410 Query: 390 FTKDIHGQFKMGFGGTLEIKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKIC 449 +D+ Q +GF + ++TS I+ G N T ++ Sbjct: 411 LRRDV--QKVVGFDAVMRVRTSTGIRAVDFFGAFYMSN---------------TTDVELA 453 Query: 450 GLSPTTTLAIYFEVVNQHNAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQ 509 GL T+ + F +H+ + + +Q Y +GQRR+R+ +A N TQ Sbjct: 454 GLDGDKTVTVEF----KHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCC---TQ 506 Query: 510 IQNIAASFDQEAAAILMARLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPN--- 566 + ++ + + + MA+ A YR +R D + + Q Y K+ + Sbjct: 507 LADLYRNCETDTLINYMAKFA-YRGVLNSPVKAVR--DTLITQCAQILACYRKNCASPSS 563 Query: 567 --SFRFSETFSLYPQFMFHLRRSPFLQVFNN-SPDESSYYRHHFMRQDLTQSLIMIQPIL 623 E L P ++ + +S LQ + D+ +Y R D+T++ + P L Sbjct: 564 AGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRL 623 Query: 624 YAYSF----SGPPEPVLLDSSSILAD-RILLMDTFFQILIYHGETIAQ 666 + S P + S L++ I L++ + ++ G ++ Q Sbjct: 624 LPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQ 671 >5KYW-B nrPDB Length = 770 Score = 646 bits (1666), Expect = 0.0, Method: Composition-based stats. Identities = 134/711 (18%), Positives = 262/711 (36%), Gaps = 104/711 (14%) Query: 9 QQNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERP-DLPPI------QYEPVLC 61 Q N +R + +P + A + +P+AA+ P P + P+ + PV C Sbjct: 42 QGNASPRFIRCTTYCFPCTSDMAKQAQIPLAAVIKPFATIPSNESPLYLVNHGESGPVRC 101 Query: 62 SRTTCRAVLNPLCQVDYRAKLWACNFCYQRNQFPPTY--------AGISELNQPAELLPQ 113 +R C+A + P Q + + C FC N PP Y + +P L Sbjct: 102 NR--CKAYMCPFMQFIEGGRRYQCGFCNCVNDVPPFYFQHLDHIGRRLDHYEKPELSLGS 159 Query: 114 F---SSIEYVVLRGPQMPLIFLYVVDTC---IEDEDLQALKESMQMSLSLLP-------P 160 + ++++Y P P F++++D I++ ++ + E ++ L +P Sbjct: 160 YEYVATLDYCRKSKPPNPPAFIFMIDVSYSNIKNGLVKLICEELKTMLEKIPKEEQEETS 219 Query: 161 TALVGLITFGRMVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQV 220 VG IT+ +++ F +L+ Q+ + + +V V Sbjct: 220 AIRVGFITYNKVLHF-------------FNVKSNLAQPQMMVVTDVGEVFV--------- 257 Query: 221 QQPPPSNRFL---QPVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLEC 277 P + FL Q Q + NL D + ++ D P+ +G+ A+ +C Sbjct: 258 ---PLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGME---ALKAADC 311 Query: 278 TFPNTGARIMMFIGGPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANR 337 G + P + PG + + K + + D EK + T +++LA Sbjct: 312 ----PGKLFIFHSSLPTAEAPGKLKNRDDKKLVNT--DKEK---ILFQPQTNVYDSLAKD 362 Query: 338 AATTGHVIDIYACALDQTGLLEMKCCPNLTGGYMVMGDSFNTSLFKQTFQRVFTKDIHGQ 397 G + ++ + + P LTGG + ++F L +Q F DI Sbjct: 363 CVAHGCSVTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEK- 421 Query: 398 FKMGFGGTLEIKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTL 457 K+GF + ++TS + + G + N+ ++ + T ++K Sbjct: 422 -KIGFDAIMRVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFK---------- 470 Query: 458 AIYFEVVNQHNAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASF 517 H+ + + +Q Y SGQRR+R+ + N + +Q+ ++ S Sbjct: 471 ---------HDDKLSEDSGALIQCAVLYTTISGQRRLRIHNLGLNCS---SQLADLYKSC 518 Query: 518 DQEAAAILMARLAIYRAETEEGPDVLR-WLDRQLIRL--CQKFGEYHKDDPNSFRFSETF 574 + +A A+ A ++A + V+R L Q + C + + ++ Sbjct: 519 ETDALINFFAKSA-FKAVLHQPLKVIREILVNQTAHMLACYRKNCASPSAASQLILPDSM 577 Query: 575 SLYPQFMFH-LRRSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYS----FS 629 + P +M L+ L S DE +Y R M + S + P L S Sbjct: 578 KVLPVYMNCLLKNCVLLSRPEISTDERAYQRQLVMTMGVADSQLFFYPQLLPIHTLDVKS 637 Query: 630 GPPEPVLLDSSSILA-DRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYE 679 + S S L+ + I L+ + ++ G + G ++P + Sbjct: 638 TMLPAAVRCSESRLSEEGIFLLANGLHMFLWLGVSSPPELIQGIFNVPSFA 688 >3EH1-A nrPDB Length = 751 Score = 612 bits (1577), Expect = e-175, Method: Composition-based stats. Identities = 142/714 (19%), Positives = 265/714 (37%), Gaps = 111/714 (15%) Query: 11 NEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVL 70 N D R + P ++ + +P+ L P ++ LP I ++ R+ CR + Sbjct: 37 NCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIVRCRS-CRTYI 95 Query: 71 NPLCQVDYRAKLWACNFCYQRNQFP------PTYAGISELNQPAELLPQFSSIEYV---- 120 NP + + W CN CY+ N P P E ++ E+ Q S++E++ Sbjct: 96 NPFVSFIDQ-RRWKCNLCYRVNDVPEEFMYNPLTRSYGEPHKRPEV--QNSTVEFIASSD 152 Query: 121 -VLRGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLP--PTALVGLITFGRMVQ 174 +LR PQ P ++L+V+D +E L L +S+ +L LP +G +TF + Sbjct: 153 YMLRPPQ-PAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGDSRTRIGFMTFDSTIH 211 Query: 175 VHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQ 234 + L EG+S+ +ML +S + V P P + + + Sbjct: 212 FYNLQ-EGLSQP---------------QMLIVSDI--------DDVFLPTPDSLLVNLYE 247 Query: 235 KIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPA 294 ++ + DLL L P + + G AL A L+ TG R+ +F Sbjct: 248 SKEL-IKDLLNAL---PNMFTNTRETHSALGPALQAAFKLMS----PTGGRVSVFQTQLP 299 Query: 295 TQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQ 354 + G G++ E S ++ ++ T ++ LA + +D++ + Sbjct: 300 SLGAGLLQSREDPNQRSSTKVVQ-----HLGPATDFYKKLALDCSGQQTAVDLFLLSSQY 354 Query: 355 TGLLEMKCCPNLTGGYMVMGDSFN-------TSLFKQTFQRVFTKDIHGQFKMGFGGTLE 407 + L + C + G + SF+ ++ +R T+ K+GF + Sbjct: 355 SDLASLACMSKYSAGCIYYYPSFHYTHNPSQAEKLQKDLKRYLTR------KIGFEAVMR 408 Query: 408 IKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQH 467 I+ ++ + + G T + ++P A+ + Sbjct: 409 IRCTKGLSMHTFHG---------------NFFVRSTDLLSLANINPDAGFAVQLSI---- 449 Query: 468 NAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMA 527 + Q Y S G+RRIRV T+ + + ++ A D +AA L+A Sbjct: 450 EESLTDTSLVCFQTALLYTSSKGERRIRVHTL---CLPVVSSLADVYAGVDVQAAICLLA 506 Query: 528 RLAIYRAETEEGPDVLRWLDRQLIRLCQKFGEYHKDDPNSFRF-SETFSLYPQFMFHLRR 586 +A+ R+ + D L ++ +G + +S + L+P ++ L + Sbjct: 507 NMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSALMAPSSLKLFPLYVLALLK 566 Query: 587 SP-FLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILY---------AYSFSG---PPE 633 F + D+ Y Q L + MI P LY A + P Sbjct: 567 QKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVHVNDRIVPQP 626 Query: 634 PVL-LDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRHLLQ 686 P+ L + + + LMD I+ G+ + +D+ Y NF + Q Sbjct: 627 PLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDN---NFIEDVLGYTNFASIPQ 677 >2NUP-B nrPDB Length = 753 Score = 611 bits (1575), Expect = e-175, Method: Composition-based stats. Identities = 143/694 (20%), Positives = 256/694 (36%), Gaps = 109/694 (15%) Query: 11 NEERDGVRFSWNVWPSSRLEATRMVVPVAALFTPLKERPDLPPIQYEPVLCSRTTCRAVL 70 N + R + P ++ + +P+ L P K+ LP + ++ R+ CR + Sbjct: 40 NCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRS-CRTYI 98 Query: 71 NPLCQVDYRAKLWACNFCYQRNQFP------PTYAGISELNQPAELLPQFSSIEYV---- 120 NP + + W CN CY+ N P P E ++ E+ Q ++IE++ Sbjct: 99 NPFVSFLDQ-RRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEV--QNATIEFMAPSE 155 Query: 121 -VLRGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLPPTAL--VGLITFGRMVQ 174 +LR PQ P ++L+V D +E L ++ +S+ +L LLP +G ITF + Sbjct: 156 YMLRPPQ-PPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIH 214 Query: 175 VHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQ 234 + L E +S+ +ML +S + V P P N + + Sbjct: 215 FYGLQ-ESLSQP---------------QMLIVSDI--------EDVFIPMPENLLVNLNE 250 Query: 235 KIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIGGPA 294 ++ + DLL L P + + G AL A L+ TG R+ +F Sbjct: 251 SKEL-VQDLLKTL---PQMFTKTLETQSALGPALQAAFKLMS----PTGGRMSVFQTQLP 302 Query: 295 TQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACALDQ 354 T G G + E S DI ++ T ++ LA + +D++ + Sbjct: 303 TLGVGALKPREEPNHRSSAKDI------HMTPSTDFYKKLALDCSGQQVAVDLFLLSGQY 356 Query: 355 TGLLEMKCCPNLTGGYMVMGDSFN-------TSLFKQTFQRVFTKDIHGQFKMGFGGTLE 407 + L + C + G + S++ ++ QR T+ K+GF + Sbjct: 357 SDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTR------KIGFEAVMR 410 Query: 408 IKTSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQH 467 I+ ++ + I G T + ++P A+ V Sbjct: 411 IRCTKGLSIHTFHG---------------NFFVRSTDLLSLPNVNPDAGYAVQMSV---- 451 Query: 468 NAPIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMA 527 + + Q Y S G+RRIRV T+ + + ++ D +A + L+A Sbjct: 452 EESLTDTQLVSFQSALLYTSSKGERRIRVHTL---CLPVVSTLNDVFLGADVQAISGLLA 508 Query: 528 RLAIYRAETEEGPDVLRWLDRQLIRLCQKF-GEYHKDDPNSFRFSETFSLYPQFMFHLRR 586 +A+ R+ T D L +I + + + L+P F+ L + Sbjct: 509 NMAVDRSMTASLSDARDALVNAVIDSLSAYRSSVLSNQQPGLMVPFSLRLFPLFVLALLK 568 Query: 587 SPFLQVFNNSP-DESSYYRHHFMRQDLTQSLIMIQPILY---------AYSFSG---PPE 633 Q N+ DE + Q L ++ P LY A + S P Sbjct: 569 QKSFQTGTNARLDERIFAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQP 628 Query: 634 PVL-LDSSSILADRILLMDTFFQILIYHGETIAQ 666 P+L L + D LMD ++++ G+ Q Sbjct: 629 PILQLSVEKLSRDGAFLMDAGSVLMLWVGKNCTQ 662 >1PD0-A nrPDB Length = 810 Score = 310 bits (794), Expect = 1e-84, Method: Composition-based stats. Identities = 106/695 (15%), Positives = 216/695 (31%), Gaps = 99/695 (14%) Query: 10 QNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTP---LKERPDLPPIQYEPVLCSRTTC 66 N D +R + N P + + +P + P L + D PP+ + ++ C Sbjct: 59 SNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRC 118 Query: 67 RAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQF----SSIEYV-- 120 R+ +NP + + W CNFC N P S+ N P + + +EY+ Sbjct: 119 RSYMNPFVTFIEQGRRWRCNFCRLANDVPMQMDQ-SDPNDPKSRYDRNEIKCAVMEYMAP 177 Query: 121 ---VLRGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLPP---TALVGLITFGR 171 LR P P + +++D I+ L ++ +L +P + ++ Sbjct: 178 KEYTLRQPP-PATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDN 236 Query: 172 MVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQ 231 + ++ + + + ++ L + + P N + Sbjct: 237 AIHYFKIPLDS------ENNEESADQINMMDIADLEEPFL------------PRPNSMVV 278 Query: 232 PVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIG 291 ++ N+ LL ++ P + G AL A L+ G +I++ G Sbjct: 279 SLKACRQNIETLLTKI---PQIFQSNLITNFALGPALKSAYHLIGG----VGGKIIVVSG 331 Query: 292 GPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACA 351 G G + + + K+ A+ + ++ + +D++ + Sbjct: 332 TLPNLGIGKLQRRNESGVVNTS----KETAQLLSCQDSFYKNFTIDCSKVQITVDLFLAS 387 Query: 352 LDQTGLLEMKCCPNLTGGYMVMGDSFNTS--LFKQTFQRVFTKDIHGQFKMGFGGTLEIK 409 D + + T G F+ F F K I F M + + Sbjct: 388 EDYMDVASLSNLSRFTAGQTHFYPGFSGKNPNDIVKFSTEFAKHISMDFCM--ETVMRAR 445 Query: 410 TSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNA 469 S +++S G + + + V + Sbjct: 446 GSTGLRMSRFYGH---------------FFNRSSDLCAFSTMPRDQSYLFEVNV----DE 486 Query: 470 PIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARL 529 I VQ ++ QRRIR+ T+A + + AS DQ A A Sbjct: 487 SIMAD-YCYVQVAVLLSLNNSQRRIRIITLA---MPTTESLAEVYASADQLAIASFYNSK 542 Query: 530 AIYRAETEEGPDVLRWLDRQLIRLC--QKFGEYHKDDPNS--FRFSETFSLYPQFMFHLR 585 A+ +A D +++ + + K + R ++P M L Sbjct: 543 AVEKALNSSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLCANLRMFPLLMHSLT 602 Query: 586 RSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGP-------------- 631 + + D + ++ L + I P +Y+ Sbjct: 603 KHMAFRSGIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPVQTEDGEAT 662 Query: 632 -----PEPVLLDSSSILADRILLMDTFFQILIYHG 661 P+P+ SS + L+D ++ ++ G Sbjct: 663 GTIVLPQPINATSSLFERYGLYLIDNGNELFLWMG 697 >1M2V-B nrPDB Length = 926 Score = 304 bits (777), Expect = 1e-82, Method: Composition-based stats. Identities = 106/695 (15%), Positives = 216/695 (31%), Gaps = 99/695 (14%) Query: 10 QNEERDGVRFSWNVWPSSRLEATRMVVPVAALFTP---LKERPDLPPIQYEPVLCSRTTC 66 N D +R + N P + + +P + P L + D PP+ + ++ C Sbjct: 175 SNASPDYIRSTLNAVPKNSSLLKKSKLPFGLVIRPYQHLYDDIDPPPLNEDGLIVRCRRC 234 Query: 67 RAVLNPLCQVDYRAKLWACNFCYQRNQFPPTYAGISELNQPAELLPQF----SSIEYV-- 120 R+ +NP + + W CNFC N P S+ N P + + +EY+ Sbjct: 235 RSYMNPFVTFIEQGRRWRCNFCRLANDVPMQMDQ-SDPNDPKSRYDRNEIKCAVMEYMAP 293 Query: 121 ---VLRGPQMPLIFLYVVDT---CIEDEDLQALKESMQMSLSLLPP---TALVGLITFGR 171 LR P P + +++D I+ L ++ +L +P + ++ Sbjct: 294 KEYTLRQPP-PATYCFLIDVSQSSIKSGLLATTINTLLQNLDSIPNHDERTRISILCVDN 352 Query: 172 MVQVHELGCEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQ 231 + ++ + + + ++ L + + P N + Sbjct: 353 AIHYFKIPLDS------ENNEESADQINMMDIADLEEPFL------------PRPNSMVV 394 Query: 232 PVQKIDMNLTDLLGELQRDPWPVPQGKRPLRSSGVALSIAVGLLECTFPNTGARIMMFIG 291 ++ N+ LL ++ P + G AL A L+ G +I++ G Sbjct: 395 SLKACRQNIETLLTKI---PQIFQSNLITNFALGPALKSAYHLIGG----VGGKIIVVSG 447 Query: 292 GPATQGPGMVVGDELKTPIRSWHDIEKDNAKYVKKGTKHFEALANRAATTGHVIDIYACA 351 G G + + + K+ A+ + ++ + +D++ + Sbjct: 448 TLPNLGIGKLQRRNESGVVNTS----KETAQLLSCQDSFYKNFTIDCSKVQITVDLFLAS 503 Query: 352 LDQTGLLEMKCCPNLTGGYMVMGDSFNTS--LFKQTFQRVFTKDIHGQFKMGFGGTLEIK 409 D + + T G F+ F F K I F M + + Sbjct: 504 EDYMDVASLSNLSRFTAGQTHFYPGFSGKNPNDIVKFSTEFAKHISMDFCM--ETVMRAR 561 Query: 410 TSREIKISGAIGPCVSLNSKGPCVSENEIGTGGTCQWKICGLSPTTTLAIYFEVVNQHNA 469 S +++S G + + + V + Sbjct: 562 GSTGLRMSRFYGH---------------FFNRSSDLCAFSTMPRDQSYLFEVNV----DE 602 Query: 470 PIPQGGRGAVQFVTQYQHSSGQRRIRVTTIARNWADAQTQIQNIAASFDQEAAAILMARL 529 I VQ ++ QRRIR+ T+A + + AS DQ A A Sbjct: 603 SIMAD-YCYVQVAVLLSLNNSQRRIRIITLA---MPTTESLAEVYASADQLAIASFYNSK 658 Query: 530 AIYRAETEEGPDVLRWLDRQLIRLC--QKFGEYHKDDPNS--FRFSETFSLYPQFMFHLR 585 A+ +A D +++ + + K + R ++P M L Sbjct: 659 AVEKALNSSLDDARVLINKSVQDILATYKKEIVVSNTAGGAPLRLCANLRMFPLLMHSLT 718 Query: 586 RSPFLQVFNNSPDESSYYRHHFMRQDLTQSLIMIQPILYAYSFSGP-------------- 631 + + D + ++ L + I P +Y+ Sbjct: 719 KHMAFRSGIVPSDHRASALNNLESLPLKYLIKNIYPDVYSLHDMADEAGLPVQTEDGEAT 778 Query: 632 -----PEPVLLDSSSILADRILLMDTFFQILIYHG 661 P+P+ SS + L+D ++ ++ G Sbjct: 779 GTIVLPQPINATSSLFERYGLYLIDNGNELFLWMG 813 >3FFN-A nrPDB Length = 782 Score = 32.5 bits (72), Expect = 0.72, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 621 PILYAYS-----FSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKS 670 P L+A S F P L + D ++L+DT+ Q+ ++ G+ + K+ Sbjct: 667 PRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKT 721 >2FH4-A nrPDB Length = 344 Score = 32.5 bits (72), Expect = 0.72, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 621 PILYAYS-----FSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKS 670 P L+A S F P L + D ++L+DT+ Q+ ++ G+ + K+ Sbjct: 229 PRLFACSNKIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKT 283 >1NPH-A nrPDB Length = 329 Score = 32.5 bits (72), Expect = 0.72, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 5/55 (9%) Query: 621 PILYAYS-----FSGPPEPVLLDSSSILADRILLMDTFFQILIYHGETIAQWRKS 670 P L+A S F P L + D ++L+DT+ Q+ ++ G+ + K+ Sbjct: 227 PRLFACSNRIGRFVIEEVPGELMQEDLATDDVMLLDTWDQVFVWVGKDSQEEEKT 281 >1TDH-A nrPDB Length = 364 Score = 31.0 bits (68), Expect = 2.0, Method: Composition-based stats. Identities = 30/131 (22%), Positives = 40/131 (30%), Gaps = 14/131 (10%) Query: 180 CEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMN 239 CE + F G + ++ L + + +QQ PS L QKI Sbjct: 162 CEALLDQRFFNGIGNYLRAEILYRLKIP-PFEKARSVLEALQQHRPSPE-LTLSQKIRTK 219 Query: 240 LT--DLLGELQRDPWPVPQ--GKRPLRSSGVALSIAVGLLECTFPNTG--------ARIM 287 L DLL P V Q G+ SG A + G R + Sbjct: 220 LQNPDLLELCHSVPKEVVQLGGRGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTI 279 Query: 288 MFIGGPATQGP 298 F G P P Sbjct: 280 WFQGDPGPLAP 290 >5ITU-A nrPDB Length = 400 Score = 30.6 bits (67), Expect = 2.4, Method: Composition-based stats. Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 14/131 (10%) Query: 180 CEGISKSYVFRGTKDLSAKQLQEMLGLSKVPVTQATRGPQVQQPPPSNRFLQPVQKIDMN 239 CE + F G + ++ L + + +QQ PS L QKI Sbjct: 162 CEALLDQRFFNGIGNYLRAEILYRLKIP-PFEKARSVLEALQQHRPSPE-LTLSQKIRTK 219 Query: 240 LT--DLLGELQRDPWPVPQ--GKRPLRSSGVALSIAVGLLECTFPNTG--------ARIM 287 L DLL P V Q GK SG A + G R + Sbjct: 220 LQNPDLLELCHSVPKEVVQLGGKGYGSESGEEDFAAFRAWLRCYGMPGMSSLQDRHGRTI 279 Query: 288 MFIGGPATQGP 298 F G P P Sbjct: 280 WFQGDPGPLAP 290 >1Q7Q-A nrPDB Length = 566 Score = 30.2 bits (66), Expect = 3.3, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 9/47 (19%) Query: 637 LDSSSILADRILLMDTFFQILIYHGETIAQWRKSGYQDMPEYENFRH 683 + S +L++R+LL+D G ++ K GY D+PE N + Sbjct: 5 REVSKLLSERVLLLD---------GAYGTEFMKYGYDDLPEELNIKA 42 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.308 0.120 0.302 Lambda K H 0.267 0.0364 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,560,701 Number of Sequences: 36641 Number of extensions: 936123 Number of successful extensions: 2253 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 15 Number of HSP's successfully gapped in prelim test: 12 Number of HSP's that attempted gapping in prelim test: 2137 Number of HSP's gapped (non-prelim): 36 length of query: 765 length of database: 10,336,785 effective HSP length: 105 effective length of query: 660 effective length of database: 6,489,480 effective search space: 4283056800 effective search space used: 4283056800 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.3 bits) S2: 63 (29.0 bits)