BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= Q01159
         (459 letters)

Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 
           36,641 sequences; 10,336,785 total letters

Searching..................................................done


Results from round 1


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3KYH-C nrPDB                                                          954   0.0  
1P16-A nrPDB                                                          303   7e-83
4PZ8-A nrPDB                                                          216   1e-56
3RTX-A nrPDB                                                           91   8e-19
1CKM-A nrPDB                                                           74   1e-13
4UPI-A nrPDB                                                           31   1.00 
4D05-A nrPDB                                                           28   7.7  
6NOD-A nrPDB                                                           28   7.9  
6AX9-A nrPDB                                                           28   9.4  

>3KYH-C nrPDB
          Length = 461

 Score =  954 bits (2467), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKL 60
           MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKL
Sbjct: 3   MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKL 62

Query: 61  LAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELL 120
           LAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELL
Sbjct: 63  LAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELL 122

Query: 121 ETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP 180
           ETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP
Sbjct: 123 ETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP 182

Query: 181 YFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGG 240
           YFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGG
Sbjct: 183 YFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGG 242

Query: 241 KDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGAD 300
           KDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGAD
Sbjct: 243 KDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGAD 302

Query: 301 VNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQET 360
           VNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQET
Sbjct: 303 VNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQET 362

Query: 361 GAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG 420
           GAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG
Sbjct: 363 GAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG 422

Query: 421 RPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD 459
           RPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD
Sbjct: 423 RPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD 461


>1P16-A nrPDB
          Length = 395

 Score =  303 bits (777), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 173/414 (41%), Positives = 241/414 (58%), Gaps = 34/414 (8%)

Query: 2   VLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLL 61
           ++ +E R  P IPG       T++L++MV +LL   +    FPGSQPVSF+   +EE L+
Sbjct: 1   MVQLEEREIPVIPGNKLDEEETKELRLMVAELLG--RRNTGFPGSQPVSFERRHLEETLM 58

Query: 62  AHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLE 121
             DY+VCEKTDGLR L+F++ +P  GE G F++ REN+YY +    FP    + +E+   
Sbjct: 59  QKDYFVCEKTDGLRCLLFLINDPDKGE-GVFLVTRENDYYFIPNIHFPLSVNETREK--P 115

Query: 122 TLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPY 181
           T   GTLLDGELV++   +++   LRY++FD LAI+G+C+   P   RL ++ +   KP+
Sbjct: 116 TYHHGTLLDGELVLENRNVSE-PVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPF 174

Query: 182 FDLRAAYPNRCTT--FPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAG 239
            + +   P+   +  FPFK+  K M  SY    V   +DKL H SDGLI+T  + PY   
Sbjct: 175 DNFKKHNPDIVNSPEFPFKVGFKTMLTSYHADDVLSKMDKLFHASDGLIYTCAETPYVF- 233

Query: 240 GKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKP-VFSLYVWQGG 298
           G D  LLKWKP +ENTVDF+L      V+DP L + D    Y +YD KP +  L VWQG 
Sbjct: 234 GTDQTLLKWKPAEENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGS 293

Query: 299 ADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKN- 357
                                    +  FA+L +SD++W+ LK LEQPL GRI EC ++ 
Sbjct: 294 -----------------------NVHTDFAKLDLSDDDWERLKALEQPLQGRIAECRQST 330

Query: 358 QETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDER 411
            + G WEMLRFR+DK NGNH SVV+K+L SI D V  +++ E    I R W +R
Sbjct: 331 TKKGYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKISRAWKKR 384


>4PZ8-A nrPDB
          Length = 403

 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/402 (35%), Positives = 205/402 (50%), Gaps = 45/402 (11%)

Query: 13  IPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTD 72
           +PG++ P +  + LK  + KLL +     TFPGSQPVSF    ++  L   +Y+VCEK+D
Sbjct: 14  VPGVLAPRDDVRVLKTRIAKLLGTS--PDTFPGSQPVSFSKKHLQ-ALKEKNYFVCEKSD 70

Query: 73  GLRVLMFIVINP-VTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDG 131
           G+R L+++  +P        ++ DR+ N+Y V    +P    K  ++        TLLDG
Sbjct: 71  GIRCLLYMTEHPRYENRPSVYLFDRKMNFYHVEKIFYPVENDKSGKKY----HVDTLLDG 126

Query: 132 ELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNR 191
           ELV+   P  K Q LRYL+FDCLA +G          RL    K   KP  +    +   
Sbjct: 127 ELVLDIYPGGKKQ-LRYLVFDCLACDGIVYMSRLLDKRLGIFAKSIQKPLDEYTKTHMRE 185

Query: 192 CTTFPFKISMKHMDFSYQLVKV-AKSLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKP 250
              FPF  S+K M+  + ++K+  + + +L H +DGLIFT  + PY +G  D  LLKWKP
Sbjct: 186 TAIFPFLTSLKKMELGHGILKLFNEVIPRLRHGNDGLIFTCTETPYVSGT-DQSLLKWKP 244

Query: 251 EQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQ 310
           ++ NT+DF L L+    E+  +          +Y   P F L VW+G             
Sbjct: 245 KEMNTIDFMLKLEFAQPEEGDI----------DYSAMPEFQLGVWEG------------- 281

Query: 311 PFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRD 370
                        Y  FA + V ++EW+ LK+   PL+ RIVEC  + E   W  LRFRD
Sbjct: 282 ----------RNMYSFFAFMYVDEKEWEKLKSFNVPLSERIVECYLDDEN-RWRFLRFRD 330

Query: 371 DKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERR 412
           DK + NH S V+ VL+SI D VS EDL + +  I+  +  R+
Sbjct: 331 DKRDANHISTVKSVLQSIEDGVSKEDLLKEMPIIREAYYNRK 372


>3RTX-A nrPDB
          Length = 343

 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 161/369 (43%), Gaps = 75/369 (20%)

Query: 43  FPGSQPVSFQHSDVEEKLLAHD-YYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYY 101
           FPG+QPVS    ++  +LL    Y V  K DG R +M I      G    FMIDR+N+ +
Sbjct: 44  FPGAQPVSMDKQNI--RLLEQKPYKVSWKADGTRYMMLI-----DGTNEVFMIDRDNSVF 96

Query: 102 LVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCL 161
            V+   FP      +++L   L + TLLDGE++I  + +      RYL++D +  N + +
Sbjct: 97  HVSNLEFPF-----RKDLRMHLSN-TLLDGEMII--DKVNGQAVPRYLIYDIIKFNAQPV 148

Query: 162 TQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMKH---MDFSYQLVKVAKSLD 218
                + RL  + +E   P  +         T  PF +  K    ++ S +L++      
Sbjct: 149 GDCDFNIRLQCIEREIISPRHEKMKTGLIDKTQEPFSVRPKQFFDINISRKLLE-GNFAK 207

Query: 219 KLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRN 278
           ++ H  DGLIF P+   Y  G  D +L KWKP   N+VDF+L +   M  +  LP++   
Sbjct: 208 EVSHEMDGLIFQPI-GKYKPGRCDDIL-KWKPPSLNSVDFRLKI-TRMGGEGLLPQN--- 261

Query: 279 RWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQ 338
                     V  LYV  GG +                        R FA++ V+ E  Q
Sbjct: 262 ----------VGLLYV--GGYE------------------------RPFAQIKVTKELKQ 285

Query: 339 NLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLE 398
                    + +I+EC    E  +W  +R R DK   N  +    V  SI++ V+ E L 
Sbjct: 286 --------YDNKIIEC--KFENNSWVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEMLF 335

Query: 399 EIVGDIKRC 407
           E    I RC
Sbjct: 336 EF---IDRC 341


>1CKM-A nrPDB
          Length = 330

 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 109/238 (45%), Gaps = 35/238 (14%)

Query: 43  FPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYL 102
            PG  PVS +  D E KL  + Y V EKTDG+R +MF     V G + C +IDR    YL
Sbjct: 56  LPGPNPVSIERKDFE-KLKQNKYVVSEKTDGIRFMMF--FTRVFGFKVCTIIDRAMTVYL 112

Query: 103 VNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLT 162
           +     PR+           L  G++ DGEL +        ++  +++FD + ++G  ++
Sbjct: 113 LPFKNIPRV-----------LFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVS 157

Query: 163 QSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFK--ISMKHMDFSYQLVKVAKSLDKL 220
           Q   +SR   + K   K + ++    P       +K  I ++H       +K A ++   
Sbjct: 158 QMDLASRFFAM-KRSLKEFKNV----PEDPAILRYKEWIPLEHPTIIKDHLKKANAI--- 209

Query: 221 PHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRN 278
            + +DGLI   V  P    G++  L K KP   +T+DF     I M ED ++   D N
Sbjct: 210 -YHTDGLIIMSVDEPVIY-GRNFNLFKLKPGTHHTIDF-----IIMSEDGTIGIFDPN 260



 Score = 30.4 bits (67), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 349 GRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDL 397
           G IVEC      G W+ ++ R DK   N     +K L +I +++++++L
Sbjct: 277 GSIVECG--FADGTWKYIQGRSDKNQANDRLTYEKTLLNIEENITIDEL 323


>4UPI-A nrPDB
          Length = 576

 Score = 31.2 bits (69), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 5/70 (7%)

Query: 139 PMTKLQELRYLM-----FDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCT 193
           PMT+ + + ++M     FD L+  G     +P   +LA  G  F   Y     A P+R +
Sbjct: 24  PMTQNRNILWIMCDQLRFDYLSCYGHERLNTPNIDKLAKRGVRFTNAYVQATVAGPSRMS 83

Query: 194 TFPFKISMKH 203
            +  +    H
Sbjct: 84  AYTGRYVRSH 93


>4D05-A nrPDB
          Length = 258

 Score = 28.1 bits (61), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 36/213 (16%)

Query: 65  YYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKE-ELLETL 123
           YYV EK DG+R              G  +I ++ N +    +     P    + EL    
Sbjct: 21  YYVSEKLDGIRAYW----------NGHQLISKQGNIFTAPTWFIASFPTTAMDGELWIAR 70

Query: 124 QDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFD 183
           Q    + G    Q N   + +++++++FD   +    ++     +++  L  +   PY  
Sbjct: 71  QQFETVSGIARTQDNQNEQWKQIKFMIFD---LPKSTVSFEQRINKMQTLVTDTNSPYLQ 127

Query: 184 L--RAAYPNRCTTFPF----------KISMKHMDFSYQLVKVAKSLDKLPHLSDG----L 227
           +  +   PN    F             + + H D  YQ  K ++ L KL    D     +
Sbjct: 128 MIEQQKIPNTVALFDLLNKVVMGKGEGLMLHHQDALYQ-TKRSRDLMKLKKFEDAEATVI 186

Query: 228 IFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKL 260
            + P K  Y  G   ++L+K     E  V FK+
Sbjct: 187 AYLPGKGKY-EGLLGAILVK----NEEGVTFKI 214


>6NOD-A nrPDB
          Length = 356

 Score = 28.1 bits (61), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 380 VVQKVLESINDSVSLEDLEEIVGDIKRCWDERRAN 414
           V+QK LE IN+ + ++ L +I   I RC  ++  N
Sbjct: 115 VLQKALEKINEPLQIKILSQIRHVIHRCMKDQNGN 149


>6AX9-A nrPDB
          Length = 382

 Score = 28.1 bits (61), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 184 LRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGGKDS 243
           + AA+P +    P+   ++    ++ L K     DK+   +DGL +T + A Y  G  D 
Sbjct: 47  IEAAFPRQL--HPYWPKLQETTRTWLLEKRLMPADKVEEYADGLCYTDLMAGYYLGAPDE 104

Query: 244 LL 245
           +L
Sbjct: 105 VL 106


Searching..................................................done


Results from round 2


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value
Sequences used in model and found again:

3KYH-C nrPDB                                                          717   0.0  
1P16-A nrPDB                                                          513   e-146
4PZ8-A nrPDB                                                          463   e-131
3RTX-A nrPDB                                                          336   1e-92
1CKM-A nrPDB                                                          240   6e-64

Sequences not found previously or not previously below threshold:

3GDE-A nrPDB                                                           42   7e-04
3L2P-A nrPDB                                                           39   0.003
4EQ5-A nrPDB                                                           37   0.021
5D0U-A nrPDB                                                           35   0.077
3RR5-A nrPDB                                                           34   0.099
1B5F-A nrPDB                                                           34   0.10 
2CFM-A nrPDB                                                           34   0.18 
3RG0-A nrPDB                                                           33   0.32 
5KS8-C nrPDB                                                           32   0.47 
5XAO-A nrPDB                                                           31   1.1  
5UMD-W nrPDB                                                           30   1.7  
2F4Q-A nrPDB                                                           29   3.2  

>3KYH-C nrPDB
          Length = 461

 Score =  717 bits (1849), Expect = 0.0,   Method: Composition-based stats.
 Identities = 459/459 (100%), Positives = 459/459 (100%)

Query: 1   MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKL 60
           MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKL
Sbjct: 3   MVLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKL 62

Query: 61  LAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELL 120
           LAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELL
Sbjct: 63  LAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELL 122

Query: 121 ETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP 180
           ETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP
Sbjct: 123 ETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKP 182

Query: 181 YFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGG 240
           YFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGG
Sbjct: 183 YFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGG 242

Query: 241 KDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGAD 300
           KDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGAD
Sbjct: 243 KDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGAD 302

Query: 301 VNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQET 360
           VNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQET
Sbjct: 303 VNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQET 362

Query: 361 GAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG 420
           GAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG
Sbjct: 363 GAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERRANMAGGSG 422

Query: 421 RPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD 459
           RPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD
Sbjct: 423 RPLPSQSQNATLSTSKPVHSQPPSNDKEPKYVDEDDWSD 461


>1P16-A nrPDB
          Length = 395

 Score =  513 bits (1321), Expect = e-146,   Method: Composition-based stats.
 Identities = 173/415 (41%), Positives = 241/415 (58%), Gaps = 34/415 (8%)

Query: 2   VLAMESRVAPEIPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLL 61
           ++ +E R  P IPG       T++L++MV +LL   +    FPGSQPVSF+   +EE L+
Sbjct: 1   MVQLEEREIPVIPGNKLDEEETKELRLMVAELLG--RRNTGFPGSQPVSFERRHLEETLM 58

Query: 62  AHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLE 121
             DY+VCEKTDGLR L+F++ +P  GE G F++ REN+YY +    FP    + +E+   
Sbjct: 59  QKDYFVCEKTDGLRCLLFLINDPDKGE-GVFLVTRENDYYFIPNIHFPLSVNETREK--P 115

Query: 122 TLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPY 181
           T   GTLLDGELV++   +++   LRY++FD LAI+G+C+   P   RL ++ +   KP+
Sbjct: 116 TYHHGTLLDGELVLENRNVSE-PVLRYVIFDALAIHGKCIIDRPLPKRLGYITENVMKPF 174

Query: 182 FDLRAAYPNRCTT--FPFKISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAG 239
            + +   P+   +  FPFK+  K M  SY    V   +DKL H SDGLI+T  + PY  G
Sbjct: 175 DNFKKHNPDIVNSPEFPFKVGFKTMLTSYHADDVLSKMDKLFHASDGLIYTCAETPYVFG 234

Query: 240 GKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKP-VFSLYVWQGG 298
             D  LLKWKP +ENTVDF+L      V+DP L + D    Y +YD KP +  L VWQG 
Sbjct: 235 -TDQTLLKWKPAEENTVDFQLEFVFNEVQDPDLDERDPTSTYLDYDAKPNLIKLRVWQGS 293

Query: 299 ADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKN- 357
                                    +  FA+L +SD++W+ LK LEQPL GRI EC ++ 
Sbjct: 294 -----------------------NVHTDFAKLDLSDDDWERLKALEQPLQGRIAECRQST 330

Query: 358 QETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERR 412
            + G WEMLRFR+DK NGNH SVV+K+L SI D V  +++ E    I R W +R 
Sbjct: 331 TKKGYWEMLRFRNDKSNGNHISVVEKILVSIKDGVKEKEVIEWCPKISRAWKKRE 385


>4PZ8-A nrPDB
          Length = 403

 Score =  463 bits (1192), Expect = e-131,   Method: Composition-based stats.
 Identities = 141/402 (35%), Positives = 205/402 (50%), Gaps = 45/402 (11%)

Query: 13  IPGLIQPGNVTQDLKMMVCKLLNSPKPTKTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTD 72
           +PG++ P +  + LK  + KLL +     TFPGSQPVSF    ++  L   +Y+VCEK+D
Sbjct: 14  VPGVLAPRDDVRVLKTRIAKLLGTS--PDTFPGSQPVSFSKKHLQ-ALKEKNYFVCEKSD 70

Query: 73  GLRVLMFIVINP-VTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDGTLLDG 131
           G+R L+++  +P        ++ DR+ N+Y V    +P    K  ++        TLLDG
Sbjct: 71  GIRCLLYMTEHPRYENRPSVYLFDRKMNFYHVEKIFYPVENDKSGKKY----HVDTLLDG 126

Query: 132 ELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNR 191
           ELV+   P  K Q LRYL+FDCLA +G          RL    K   KP  +    +   
Sbjct: 127 ELVLDIYPGGKKQ-LRYLVFDCLACDGIVYMSRLLDKRLGIFAKSIQKPLDEYTKTHMRE 185

Query: 192 CTTFPFKISMKHMDFSYQLVKV-AKSLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKP 250
              FPF  S+K M+  + ++K+  + + +L H +DGLIFT  + PY +G  D  LLKWKP
Sbjct: 186 TAIFPFLTSLKKMELGHGILKLFNEVIPRLRHGNDGLIFTCTETPYVSG-TDQSLLKWKP 244

Query: 251 EQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQ 310
           ++ NT+DF L L+    E+  +          +Y   P F L VW+G             
Sbjct: 245 KEMNTIDFMLKLEFAQPEEGDI----------DYSAMPEFQLGVWEG------------- 281

Query: 311 PFDRKEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRFRD 370
                        Y  FA + V ++EW+ LK+   PL+ RIVEC  + E   W  LRFRD
Sbjct: 282 ----------RNMYSFFAFMYVDEKEWEKLKSFNVPLSERIVECYLDDEN-RWRFLRFRD 330

Query: 371 DKLNGNHTSVVQKVLESINDSVSLEDLEEIVGDIKRCWDERR 412
           DK + NH S V+ VL+SI D VS EDL + +  I+  +  R+
Sbjct: 331 DKRDANHISTVKSVLQSIEDGVSKEDLLKEMPIIREAYYNRK 372


>3RTX-A nrPDB
          Length = 343

 Score =  336 bits (862), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 105/370 (28%), Positives = 158/370 (42%), Gaps = 73/370 (19%)

Query: 41  KTFPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNY 100
             FPG+QPVS    ++   L    Y V  K DG R +M I      G    FMIDR+N+ 
Sbjct: 42  SGFPGAQPVSMDKQNIRL-LEQKPYKVSWKADGTRYMMLI-----DGTNEVFMIDRDNSV 95

Query: 101 YLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRC 160
           + V+   FP      +++L   L + TLLDGE++I    +      RYL++D +  N + 
Sbjct: 96  FHVSNLEFPF-----RKDLRMHLSN-TLLDGEMIID--KVNGQAVPRYLIYDIIKFNAQP 147

Query: 161 LTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMKH---MDFSYQLVKVAKSL 217
           +     + RL  + +E   P  +         T  PF +  K    ++ S +L++     
Sbjct: 148 VGDCDFNIRLQCIEREIISPRHEKMKTGLIDKTQEPFSVRPKQFFDINISRKLLE-GNFA 206

Query: 218 DKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDR 277
            ++ H  DGLIF P+   Y  G  D +L KWKP   N+VDF+L +   M  +  LP++  
Sbjct: 207 KEVSHEMDGLIFQPI-GKYKPGRCDDIL-KWKPPSLNSVDFRLKI-TRMGGEGLLPQN-- 261

Query: 278 NRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEW 337
                      V  LYV  GG +                        R FA++ V+ E  
Sbjct: 262 -----------VGLLYV--GGYE------------------------RPFAQIKVTKELK 284

Query: 338 QNLKNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDL 397
           Q         + +I+EC    E  +W  +R R DK   N  +    V  SI++ V+ E L
Sbjct: 285 Q--------YDNKIIEC--KFENNSWVFMRQRIDKSFPNAYNTAMAVCNSISNPVTKEML 334

Query: 398 EEIVGDIKRC 407
            E    I RC
Sbjct: 335 FEF---IDRC 341


>1CKM-A nrPDB
          Length = 330

 Score =  240 bits (613), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 88/359 (24%), Positives = 142/359 (39%), Gaps = 91/359 (25%)

Query: 43  FPGSQPVSFQHSDVEEKLLAHDYYVCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYL 102
            PG  PVS +  D E KL  + Y V EKTDG+R +MF     V G + C +IDR    YL
Sbjct: 56  LPGPNPVSIERKDFE-KLKQNKYVVSEKTDGIRFMMF--FTRVFGFKVCTIIDRAMTVYL 112

Query: 103 VNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLT 162
           +     PR+           L  G++ DGEL +        ++  +++FD + ++G  ++
Sbjct: 113 LPFKNIPRV-----------LFQGSIFDGELCVDIVE----KKFAFVLFDAVVVSGVTVS 157

Query: 163 QSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFK--ISMKHMDFSYQLVKVAKSLDKL 220
           Q   +SR   + K   K + ++    P       +K  I ++H       +K A ++   
Sbjct: 158 QMDLASRFFAM-KRSLKEFKNV----PEDPAILRYKEWIPLEHPTIIKDHLKKANAI--- 209

Query: 221 PHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRW 280
            + +DGLI   V  P   G ++  L K KP   +T+DF     I M ED ++   D N  
Sbjct: 210 -YHTDGLIIMSVDEPVIYG-RNFNLFKLKPGTHHTIDF-----IIMSEDGTIGIFDPNLR 262

Query: 281 YYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNL 340
                  PV  L    G  +                                        
Sbjct: 263 ----KNVPVGKL---DGYYN---------------------------------------- 275

Query: 341 KNLEQPLNGRIVECAKNQETGAWEMLRFRDDKLNGNHTSVVQKVLESINDSVSLEDLEE 399
                   G IVEC      G W+ ++ R DK   N     +K L +I +++++++L +
Sbjct: 276 -------KGSIVEC--GFADGTWKYIQGRSDKNQANDRLTYEKTLLNIEENITIDELLD 325


>3GDE-A nrPDB
          Length = 558

 Score = 41.8 bits (96), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 58/328 (17%), Positives = 109/328 (33%), Gaps = 41/328 (12%)

Query: 67  VCEKTDGLRVLMFIVINPVTGEQGCFMIDRENNYYLVNGFRFPRLPQKKKEELLETLQDG 126
           V  K DG RV +        G +      R  N         P + ++ K+ +      G
Sbjct: 249 VEWKFDGSRVQVH-----WDGSRVTIYSRRLENVTNA----LPDIVEEIKKSVKP----G 295

Query: 127 TLLDGELVI--QTNPMTKLQELRYL--MFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYF 182
            +LDGE++   +  PM     LR      D   +  +   ++     L H G+    P  
Sbjct: 296 VILDGEVIAVKEGKPMPFQHVLRRFRRKHDVAKMVEKIPLEAHFFDILYHDGECIDLPLR 355

Query: 183 DLRAAYPNRCTTFPFKISMKHMDFSYQLVKVAKSLDK-LPHLSDGLIFTPVKAPYTAGGK 241
           + R            KI +     +  + +V K  D+ +    +G++     +PY  G +
Sbjct: 356 ERRKL-LESAVNESEKIKLAKQIVTDSVDEVRKMYDEAISAGHEGVMIKLPSSPYIPGKR 414

Query: 242 DSLLLKWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADV 301
               LK K     T+D  ++            +  R+ W  +      F L         
Sbjct: 415 GKNWLKVK-AIMETLDLVVV-------GGEWGEGKRSHWLSS------FELACLDPVTGK 460

Query: 302 NSRLKHFDQPFDRKEFEILERTYRKFAELSVSDE-EWQNLKNLEQPLNGRIVECAKNQET 360
             ++      F  ++ E L   +R         + E+      E       ++ +   E+
Sbjct: 461 LLKVGRVATGFTEEDLEELTEMFRPLIVSQQGKKVEFIPKYVFEVAYQE--IQKSPKYES 518

Query: 361 GAW----EMLRFRDDKLNGNHTSVVQKV 384
           G        +R RDDK + +    +++V
Sbjct: 519 GYALRFPRFVRLRDDK-DVDEADTIERV 545


>3L2P-A nrPDB
          Length = 579

 Score = 39.5 bits (90), Expect = 0.003,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 51/161 (31%), Gaps = 37/161 (22%)

Query: 109 PRLPQKKK--EELLETLQ---DGTLLDGELVIQTNPMTKLQELRYL-------------- 149
           P LP K    ++ +          +LD E+++  N   K      L              
Sbjct: 278 PVLPHKVAHFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVC 337

Query: 150 --MFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMKHMDFS 207
             +FDC+  N   L   P   R   L     +                P +I    M   
Sbjct: 338 LFVFDCIYFNDVSLMDRPLCERRKFLHDNMVE---------------IPNRIMFSEMKRV 382

Query: 208 YQLVKVAKSLDKL-PHLSDGLIFTPVKAPYTAGGKDSLLLK 247
            + + +A  + ++     +GL+   VK  Y  G +  L +K
Sbjct: 383 TKALDLADMITRVIQEGLEGLVLKDVKGTYEPGKRHWLKVK 423


>4EQ5-A nrPDB
          Length = 571

 Score = 36.8 bits (83), Expect = 0.021,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 59/176 (33%), Gaps = 51/176 (28%)

Query: 106 FRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLM--------------- 150
              P + ++ KE L     +  +++GELV       + +  +Y++               
Sbjct: 288 KSIPEVVERVKEALKP---EKVIVEGELV-AVEETGRPRPFQYVLRRFRRKYNIEEMIEK 343

Query: 151 -------FDCLAINGRCLTQSPTSSRLAHLG-----KEFFKPYFDLRAAYPNRCTTFPFK 198
                  FD L ++G+ +  +P   R   L       E+ K   +L    P     F   
Sbjct: 344 IPLELNLFDILYVDGQNMIDTPFMERRKVLESVVNSNEWIKSAENLITKSPEEAEAF--- 400

Query: 199 ISMKHMDFSYQLVKVAKSLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQEN 254
                    ++ + +           +GL+   + + Y  G +    LK KP  EN
Sbjct: 401 --------YHKALDLGH---------EGLMAKRLDSTYEPGNRGKKWLKIKPTMEN 439


>5D0U-A nrPDB
          Length = 714

 Score = 34.8 bits (78), Expect = 0.077,   Method: Composition-based stats.
 Identities = 30/171 (17%), Positives = 59/171 (34%), Gaps = 16/171 (9%)

Query: 100 YYLVNGFRFPRLPQKKKEELLETLQDGTLLDGELVIQTNPMTKLQELRYLMFDCLAINGR 159
           Y+ +   R      K+++E L+   +  +L    V +T      Q  +Y+++D L     
Sbjct: 28  YFKILKARRKLPVNKQRQEFLDLYHNNQIL--VFVGETGSGKTTQIPQYVLYDELPHQTG 85

Query: 160 CLTQSPTSSRLAHL--GKEFFKPYFDLRAAYPNRCTTFPFKISMKHMDFSYQLVKV---A 214
            L       R+A +   +                     + I  ++   S  L+K     
Sbjct: 86  KLIACTQPRRVAAMSVAQRVADELDVKLGEEVG------YSIRFENKTSSKTLLKYMTDG 139

Query: 215 KSLDKLPHLSDGLIFTPV---KAPYTAGGKDSLLLKWKPEQENTVDFKLIL 262
           + L +  H  D   ++ +   +A       D L+   K   E   D K+I+
Sbjct: 140 QLLREAMHDRDMSRYSCIILDEAHERTLATDILMALLKQLSERRKDLKIIV 190


>3RR5-A nrPDB
          Length = 570

 Score = 34.5 bits (77), Expect = 0.099,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 38/120 (31%), Gaps = 17/120 (14%)

Query: 136 QTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTF 195
             + M +   L   +FD L ++G  L  +    R                          
Sbjct: 335 NIDEMIEKIPLELNLFDILYVDGESLIDTEFVER----------------RKRLEESVEE 378

Query: 196 PFKISMKHMDFSYQLVKVAKSLDK-LPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQEN 254
             KI +     + ++ +      + L    +GL+   + + Y  G +    LK KP  EN
Sbjct: 379 SEKIKIAEQLVTKKVEEAEAFYKRALELGHEGLMAKRLDSVYEPGNRGKKWLKIKPTMEN 438


>1B5F-A nrPDB
          Length = 239

 Score = 34.5 bits (77), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 34/100 (34%), Gaps = 8/100 (8%)

Query: 202 KHMDFSYQLVKVAK-SLDKLPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQENTVDFKL 260
           K  DF     +     L +L     GL F  +  P      +  L+K     E    F L
Sbjct: 99  KEQDFIEATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVK-----ERRFSFWL 153

Query: 261 ILDIPMVEDPSL--PKDDRNRWYYNYDVKPVFSLYVWQGG 298
             ++   E   L     D N +  ++   PV   Y WQ G
Sbjct: 154 NRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFG 193


>2CFM-A nrPDB
          Length = 561

 Score = 33.7 bits (75), Expect = 0.18,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 77/255 (30%), Gaps = 35/255 (13%)

Query: 136 QTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTF 195
               M +   L   +FD L ++G+ L  +    R   L +E  K                
Sbjct: 324 NIEEMMEKIPLELNLFDVLYVDGQSLIDTKFIDRRRTL-EEIIKQNE------------- 369

Query: 196 PFKISMKHMDFSYQLVKVAKSLDK-LPHLSDGLIFTPVKAPYTAGGKDSLLLKWKPEQEN 254
             KI +     + ++ +      + L    +GL+   + A Y  G +    LK KP  EN
Sbjct: 370 --KIKVAENLITKKVEEAEAFYKRALEMGHEGLMAKRLDAVYEPGNRGKKWLKIKPTMEN 427

Query: 255 TVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQGGADVNSRLKHFDQPFDR 314
                L L I   E       +  R +        F L  +         +      F  
Sbjct: 428 -----LDLVIIGAEWG-----EGRRAHLFGS----FILGAYDPETGEFLEVGKVGSGFTD 473

Query: 315 KEFEILERTYRKFAELSVSDEEWQNLKNLEQPLNGRIVECAKNQETGAWEMLRF---RDD 371
            +     +  +           W   K + +     I +  K +   A    RF   RDD
Sbjct: 474 DDLVEFTKMLKPLIIKEEGKRVWLQPKVVIEVTYQEIQKSPKYRSGFALRFPRFVALRDD 533

Query: 372 KLNGNHTSVVQKVLE 386
           K        ++++ +
Sbjct: 534 K-GPEDADTIERIAQ 547


>3RG0-A nrPDB
          Length = 332

 Score = 32.9 bits (73), Expect = 0.32,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 39/98 (39%), Gaps = 6/98 (6%)

Query: 247 KWKPEQENTVDFKLILDIPMVEDPSLPKDDRNRWYYNYDVKPVFSLYVWQ---GGADVNS 303
           +WKP Q +  D+K     P +++   P+   +   Y YD   V  L +WQ   G    N 
Sbjct: 230 EWKPRQIDNPDYKGTWIHPEIDN---PEYSPDANIYAYDSFAVLGLDLWQVKSGTIFDNF 286

Query: 304 RLKHFDQPFDRKEFEILERTYRKFAELSVSDEEWQNLK 341
            + + +   +    E    T     ++    +E Q LK
Sbjct: 287 LITNDEAYAEEFGNETWGVTKAAEKQMKDKQDEEQRLK 324


>5KS8-C nrPDB
          Length = 617

 Score = 32.2 bits (71), Expect = 0.47,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 9/55 (16%)

Query: 390 DSVSLEDLEEIVGDI-------KRCWDERRANMAGGSGRPLPSQSQNATLSTSKP 437
           D V+ E + EI+ +I            +R+A+ A  SGRP P+ +    ++T+ P
Sbjct: 502 DGVTEEVVVEILNEIEVSGGGQSSGEAKRKASSAASSGRPRPTHA--GCVTTAMP 554


>5XAO-A nrPDB
          Length = 445

 Score = 31.0 bits (68), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 5/73 (6%)

Query: 39  PTKTFPGSQPVSFQHS--DVEEKLLAHDYY---VCEKTDGLRVLMFIVINPVTGEQGCFM 93
           PT T P +  VS + +      +      +   +C  TD     + I  +P         
Sbjct: 309 PTDTIPDASDVSIRRAIATFMPQFKNKKMFNQAMCWCTDTADAALLICEHPEWKNFVLAT 368

Query: 94  IDRENNYYLVNGF 106
            D  +++ L+   
Sbjct: 369 GDSGHSFKLLPNI 381


>5UMD-W nrPDB
          Length = 203

 Score = 30.2 bits (66), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 155 AINGRCLTQSPTSSRLAHLGKEFFKPYFDLRAAYPNRCTTFPFKISMK---HMDFSYQLV 211
             +GR      +   +  + +E  KP      +   +    PFK+++K    ++ S Q  
Sbjct: 131 KAHGRINPFMSSPCHIQIIAREINKPAKKSLLSNAEKQKKLPFKVTLKKLIKLNISNQNR 190

Query: 212 KVAKSLDK 219
              KS+ K
Sbjct: 191 LKNKSVKK 198


>2F4Q-A nrPDB
          Length = 346

 Score = 29.5 bits (64), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/87 (19%), Positives = 36/87 (41%)

Query: 126 GTLLDGELVIQTNPMTKLQELRYLMFDCLAINGRCLTQSPTSSRLAHLGKEFFKPYFDLR 185
           GTLL  E + Q    +  ++ + ++ DC+      L  +P  +R +++    F  Y D +
Sbjct: 243 GTLLAAEYLAQQGTESSERQAKKVLVDCVKFVADDLGNTPAVTRGSYICPVIFDRYLDGK 302

Query: 186 AAYPNRCTTFPFKISMKHMDFSYQLVK 212
                   T   +  ++ +  S   +K
Sbjct: 303 VLDDYEPRTERQEAELEGLTRSEGALK 329


  Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta
    Posted date:  Jan 3, 2023  9:05 PM
  Number of letters in database: 10,336,785
  Number of sequences in database:  36,641
  
Lambda     K      H
   0.307    0.117    0.305 

Lambda     K      H
   0.267   0.0364    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,229,043
Number of Sequences: 36641
Number of extensions: 613903
Number of successful extensions: 1582
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 1512
Number of HSP's gapped (non-prelim): 35
length of query: 459
length of database: 10,336,785
effective HSP length: 100
effective length of query: 359
effective length of database: 6,672,685
effective search space: 2395493915
effective search space used: 2395493915
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 60 (27.9 bits)