BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q01101 (510 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 3ZMS-C nrPDB 988 0.0 3W5K-B nrPDB 42 7e-04 1T3D-A nrPDB 30 1.9 4LM8-A nrPDB 30 3.2 >3ZMS-C nrPDB Length = 509 Score = 988 bits (2554), Expect = 0.0, Method: Compositional matrix adjust. Identities = 509/509 (100%), Positives = 509/509 (100%) Query: 2 PRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAER 61 PRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAER Sbjct: 1 PRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAER 60 Query: 62 AHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFN 121 AHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFN Sbjct: 61 AHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFN 120 Query: 122 LGSPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAAR 181 LGSPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAAR Sbjct: 121 LGSPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAAR 180 Query: 182 GPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDEVTTSPVL 241 GPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDEVTTSPVL Sbjct: 181 GPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDEVTTSPVL 240 Query: 242 GLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECA 301 GLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECA Sbjct: 241 GLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECA 300 Query: 302 KVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESG 361 KVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESG Sbjct: 301 KVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESG 360 Query: 362 SEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQE 421 SEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQE Sbjct: 361 SEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQE 420 Query: 422 AAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS 481 AAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS Sbjct: 421 AAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS 480 Query: 482 PGLTRHINKCHPSENRQVILLQVPVRPAC 510 PGLTRHINKCHPSENRQVILLQVPVRPAC Sbjct: 481 PGLTRHINKCHPSENRQVILLQVPVRPAC 509 >3W5K-B nrPDB Length = 264 Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 36/122 (29%), Positives = 47/122 (38%), Gaps = 24/122 (19%) Query: 267 FICQLCKEEYADPFALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRWH---KPRPAP 323 F C+ C +EY AL H S + C C K FS P L H R H KP P Sbjct: 154 FNCKYCNKEYLSLGALKMHIRSHTLPCV--CGTCGKAFSRPWLLQGHVRTHTGEKPFSCP 211 Query: 324 AAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESGSEDGLYECHHCAKKFRRQAYLR 383 +RA + RA ++ S+ Y+C CA+ F R + L Sbjct: 212 HCSRAFADRSNLRAHL-------------------QTHSDVKKYQCQACARTFSRMSLLH 252 Query: 384 KH 385 KH Sbjct: 253 KH 254 Score = 28.9 bits (63), Expect = 5.0, Method: Compositional matrix adjust. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 443 CPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH 487 CP C +FA + HL+ + + C+ C TF L +H Sbjct: 210 CPHCSRAFADRSNLRAHLQTHSDVKKYQCQACARTFSRMSLLHKH 254 >1T3D-A nrPDB Length = 289 Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust. Identities = 27/85 (31%), Positives = 33/85 (38%), Gaps = 8/85 (9%) Query: 150 GGGGTCGGD--PLLFAPAELKMGTAFSAGAEAARGPGPGPPLPPAAALRPPGKRPPPPTA 207 GG G GGD P + + G E RG G + L+P PP TA Sbjct: 199 GGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAG---SVVLQPV---PPHTTA 252 Query: 208 AEPPAKAVKAPGAKKPKAIRKLHFE 232 A PA+ V P + KP HF Sbjct: 253 AGVPARIVGKPDSDKPSMDMDQHFN 277 >4LM8-A nrPDB Length = 700 Score = 29.6 bits (65), Expect = 3.2, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 425 DGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVF-----PCKYCPATF 478 D G ++GL A CH P SFA++GA E L H + C C + F Sbjct: 525 DANGKAIVGLDACVTCHT-PDGTYSFANRGALELKLHKKHVEDAYGLIGGNCASCHSDF 582 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 3ZMS-C nrPDB 780 0.0 3W5K-B nrPDB 149 3e-36 Sequences not found previously or not previously below threshold: 4CFG-A nrPDB 40 0.002 2EBT-A nrPDB 39 0.005 5L3D-A nrPDB 37 0.023 1T3D-A nrPDB 35 0.090 3JC8-Qa nrPDB 33 0.34 4N78-F nrPDB 32 0.57 4LM8-A nrPDB 32 0.85 6AZ1-Y nrPDB 31 1.1 6MAT-A nrPDB 31 1.4 5IT7-CC nrPDB 30 2.6 5KWG-C nrPDB 30 2.8 6QX9-R nrPDB 29 4.5 5ZLM-A nrPDB 29 4.5 5XJC-x nrPDB 29 8.0 5NUS-B nrPDB 28 10.0 >3ZMS-C nrPDB Length = 509 Score = 780 bits (2015), Expect = 0.0, Method: Composition-based stats. Identities = 509/509 (100%), Positives = 509/509 (100%) Query: 2 PRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAER 61 PRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAER Sbjct: 1 PRGFLVKRSKKSTPVSYRVRGGEDGDRALLLSPSCGGARAEPPAPSPVPGPLPPPPPAER 60 Query: 62 AHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFN 121 AHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFN Sbjct: 61 AHAALAAALACAPGPQPPPQGPRAAHFGNPEAAHPAPLYSPTRPVSREHEKHKYFERSFN 120 Query: 122 LGSPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAAR 181 LGSPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAAR Sbjct: 121 LGSPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAAR 180 Query: 182 GPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDEVTTSPVL 241 GPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDEVTTSPVL Sbjct: 181 GPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDEVTTSPVL 240 Query: 242 GLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECA 301 GLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECA Sbjct: 241 GLKIKEGPVEAPRGRAGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECA 300 Query: 302 KVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESG 361 KVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESG Sbjct: 301 KVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESG 360 Query: 362 SEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQE 421 SEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQE Sbjct: 361 SEDGLYECHHCAKKFRRQAYLRKHLLAHHQALQAKGAPLAPPAEDLLALYPGPDEKAPQE 420 Query: 422 AAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS 481 AAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS Sbjct: 421 AAGDGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSS 480 Query: 482 PGLTRHINKCHPSENRQVILLQVPVRPAC 510 PGLTRHINKCHPSENRQVILLQVPVRPAC Sbjct: 481 PGLTRHINKCHPSENRQVILLQVPVRPAC 509 >3W5K-B nrPDB Length = 264 Score = 149 bits (376), Expect = 3e-36, Method: Composition-based stats. Identities = 36/122 (29%), Positives = 47/122 (38%), Gaps = 24/122 (19%) Query: 267 FICQLCKEEYADPFALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRWH---KPRPAP 323 F C+ C +EY AL H S + C C K FS P L H R H KP P Sbjct: 154 FNCKYCNKEYLSLGALKMHIRSHTLPCV--CGTCGKAFSRPWLLQGHVRTHTGEKPFSCP 211 Query: 324 AAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESGSEDGLYECHHCAKKFRRQAYLR 383 +RA + RA ++ S+ Y+C CA+ F R + L Sbjct: 212 HCSRAFADRSNLRAHL-------------------QTHSDVKKYQCQACARTFSRMSLLH 252 Query: 384 KH 385 KH Sbjct: 253 KH 254 Score = 28.5 bits (62), Expect = 7.8, Method: Composition-based stats. Identities = 13/45 (28%), Positives = 20/45 (44%) Query: 443 CPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRH 487 CP C +FA + HL+ + + C+ C TF L +H Sbjct: 210 CPHCSRAFADRSNLRAHLQTHSDVKKYQCQACARTFSRMSLLHKH 254 >4CFG-A nrPDB Length = 630 Score = 40.5 bits (93), Expect = 0.002, Method: Composition-based stats. Identities = 28/165 (16%), Positives = 47/165 (28%), Gaps = 36/165 (21%) Query: 263 PLGE-FICQLCKEEYADPFALAQHKCSRIVRVEYR-CPECAKVFSCPANLASHRRWHKPR 320 PL E C +C E + +P + C C + + P Sbjct: 6 PLAEELSCSICLEPFKEPV---------TTPCGHNFCGSC---LNETWAVQG-----SPY 48 Query: 321 PAPAAARAPEPEAAARAE----------AREAPGGGSDRDTPSPGGVSESGSEDGLYECH 370 P + + D +P + + S + C Sbjct: 49 LCPQCRAVYQARPQLHKNTVLCNVVEQFLQADLAREPPADVWTPPARASAPSPNAQVACD 108 Query: 371 HCAKKFR-------RQAYLRKHLLAHHQALQAKGAPLAPPAEDLL 408 HC K+ ++ ++HL H + + PL PP DLL Sbjct: 109 HCLKEAAVKTCLVCMASFCQEHLQPHFDSPAFQDHPLQPPVRDLL 153 >2EBT-A nrPDB Length = 100 Score = 38.9 bits (89), Expect = 0.005, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 22/79 (27%), Gaps = 7/79 (8%) Query: 269 CQL--CKEEYADPFALAQHKCSRIVRVEYRCP--ECAKVFSCPANLASHRRWH---KPRP 321 C C + Y L H + Y+C C F+ L H R H KP Sbjct: 18 CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77 Query: 322 APAAARAPEPEAAARAEAR 340 R+ + Sbjct: 78 CGVCNRSFSRSDHLALHMK 96 Score = 38.5 bits (88), Expect = 0.008, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 26/107 (24%) Query: 289 RIVRVEYRCPECAKVFSCPANLASHRRWH---KPRPAP--AAARAPEPEAAARAEAREAP 343 RI +Y P C KV++ ++L +H R H KP R+ Sbjct: 14 RIHYCDY--PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK-- 69 Query: 344 GGGSDRDTPSPGGVSESGSEDGLYECHHCAKKFRRQAYLRKHLLAHH 390 + ++C C + F R +L H+ H Sbjct: 70 -----------------HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99 Score = 33.5 bits (75), Expect = 0.20, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 20/47 (42%) Query: 272 CKEEYADPFALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRWHK 318 C +A L +H ++C C + FS +LA H + H+ Sbjct: 53 CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99 >5L3D-A nrPDB Length = 852 Score = 36.6 bits (83), Expect = 0.023, Method: Composition-based stats. Identities = 27/81 (33%), Positives = 33/81 (40%), Gaps = 5/81 (6%) Query: 144 GGASGAG-GGGTCGGDPLLFAPAELKMGTAFSAGAEAARGPGPGPPLPPAAALRPPGKRP 202 G +G G GG+ G + PA L GA R P P P A+ PPG Sbjct: 20 GTEAGPGTAGGSENGSEVAAQPAGLSGPAEVGPGAVGERTPRKKEP--PRAS--PPGGLA 75 Query: 203 PPPTAAEPPAKAVKAPGAKKP 223 PP +A P A PG+ P Sbjct: 76 EPPGSAGPQAGPTVVPGSATP 96 >1T3D-A nrPDB Length = 289 Score = 34.7 bits (78), Expect = 0.090, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 16/88 (18%) Query: 150 GGGGTCGGDPLLFAPAELKMGTAFSAGA------EAARGPGPGPPLPPAAALRPPGKRPP 203 GG G GGD +++ G AGA E RG G + L+P PP Sbjct: 199 GGTGKSGGD----RHPKIREGVMIGAGAKILGNIEVGRGAKIGAG---SVVLQPV---PP 248 Query: 204 PPTAAEPPAKAVKAPGAKKPKAIRKLHF 231 TAA PA+ V P + KP HF Sbjct: 249 HTTAAGVPARIVGKPDSDKPSMDMDQHF 276 >3JC8-Qa nrPDB Length = 901 Score = 32.7 bits (73), Expect = 0.34, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%) Query: 170 GTAFSAGAEAARGPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAKKPKA 225 GT+ S A+ A P + + +P P AA+ PAK VKA A PKA Sbjct: 135 GTSQSVDAKRAETPARTERMTASVEAKPH------PVAAQAPAKVVKAESAAVPKA 184 >4N78-F nrPDB Length = 514 Score = 32.0 bits (71), Expect = 0.57, Method: Composition-based stats. Identities = 30/90 (33%), Positives = 30/90 (33%), Gaps = 27/90 (30%) Query: 46 PSPVPGPLPP---PPPAERAHA-ALAAALACAPGPQ-----PPPQGPRAAHFG------- 89 P VP P PP P PA A L A A AP P P P AA G Sbjct: 271 PIAVPTPSPPSVFPAPAGSAGTPPLPATSASAPAPLVPATVPSSTAPDAAAGGAQTLADG 330 Query: 90 -----------NPEAAHPAPLYSPTRPVSR 108 P HP YS RP SR Sbjct: 331 FTSPTPPVVSSTPPTGHPVQFYSMNRPASR 360 Score = 31.6 bits (70), Expect = 0.93, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 40/125 (32%), Gaps = 17/125 (13%) Query: 124 SPVSAESFPTPAALLGGGGGGGASGAGGGGTCGGDPLLFAPAELKMGTAFSAGAEAARGP 183 +P FP PA G A T P PA + TA A A A+ Sbjct: 276 TPSPPSVFPAPA--------GSAGTPPLPATSASAPAPLVPATVPSSTAPDAAAGGAQTL 327 Query: 184 GPG--PPLPPAAALRPPGKRP-------PPPTAAEPPAKAVKAPGAKKPKAIRKLHFEDE 234 G P PP + PP P P + PP P + P + +++ Sbjct: 328 ADGFTSPTPPVVSSTPPTGHPVQFYSMNRPASRHTPPTIGGSLPYRRPPSITSQTSLQNQ 387 Query: 235 VTTSP 239 + P Sbjct: 388 MNGGP 392 >4LM8-A nrPDB Length = 700 Score = 31.6 bits (70), Expect = 0.85, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 425 DGEGAGVLGLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVF-----PCKYCPATF 478 D G ++GL A CH P SFA++GA E L H + C C + F Sbjct: 525 DANGKAIVGLDACVTCH-TPDGTYSFANRGALELKLHKKHVEDAYGLIGGNCASCHSDF 582 >6AZ1-Y nrPDB Length = 159 Score = 31.2 bits (69), Expect = 1.1, Method: Composition-based stats. Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 4/55 (7%) Query: 171 TAFSAGAEAARGPGPGPPLPPA-AALRPP---GKRPPPPTAAEPPAKAVKAPGAK 221 TA +AG + AR P P RPP G RPP A PPA+ AP K Sbjct: 102 TAGAAGQKGARPPAQKGARPSGQKGARPPAQKGARPPAQKGARPPAQKGAAPARK 156 >6MAT-A nrPDB Length = 813 Score = 30.8 bits (68), Expect = 1.4, Method: Composition-based stats. Identities = 31/115 (26%), Positives = 42/115 (36%), Gaps = 11/115 (9%) Query: 108 REHEKHKYFERSFNLGSPVSAESFPTPAALLGGGGGGGASGAGG-GGTCGGDPLLFAPAE 166 RE +K +R NL + A+S+ G GA A G GT G APA Sbjct: 94 RERQKAAQAQRDANLLNRQIAKSW-------GFASSPGAKAADGEKGTDTGSIATPAPAT 146 Query: 167 LKMGTAFSAGAEAARGPGPGPPLPPAAALRPPGKRPPPPTAAEPPAKAVKAPGAK 221 + +A GP LP ++ R P P P P + + P K Sbjct: 147 PAVAENMAADTPTT---STGPVLPASSTDRQPNGEPRPKKRKAAPKEIDRTPPTK 198 >5IT7-CC nrPDB Length = 360 Score = 30.1 bits (66), Expect = 2.6, Method: Composition-based stats. Identities = 28/83 (33%), Positives = 35/83 (42%), Gaps = 13/83 (15%) Query: 96 PAPLYSPTRP-------VSREHEKHKYFERSFNLGSPVSAESFPTPAALLG----GGGGG 144 PA +P RP S K + + S G SAES+ T A+ GGGG Sbjct: 21 PAVFRAPIRPDIVHSVFTSVNKNKRQAYAVSEKAGHQTSAESWGTGRAVARIPRVGGGGT 80 Query: 145 GASG-AGGGGTCGGDPLLFAPAE 166 SG A G C G +FAP + Sbjct: 81 HRSGQAAFGNMCRGGR-MFAPTK 102 >5KWG-C nrPDB Length = 631 Score = 30.1 bits (66), Expect = 2.8, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 35/125 (28%), Gaps = 2/125 (1%) Query: 257 AGGAARPLGEFICQLCKEEYADPFALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRW 316 AGG AR G C E+ A +H S + + CPA + + Sbjct: 199 AGGCARCKGPLPTDCCHEQCAAGCTGPKH--SDCLACLHFNHSGICELHCPALVTYNTDT 256 Query: 317 HKPRPAPAAARAPEPEAAARAEAREAPGGGSDRDTPSPGGVSESGSEDGLYECHHCAKKF 376 + P P P E +EDG C C+K Sbjct: 257 FESMPNPEGRYTFGASCVTACPYNYLSTDVGSCTLVCPLHNQEVTAEDGTQRCEKCSKPC 316 Query: 377 RRQAY 381 R Y Sbjct: 317 ARVCY 321 >6QX9-R nrPDB Length = 480 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 13/22 (59%), Positives = 14/22 (63%) Query: 184 GPGPPLPPAAALRPPGKRPPPP 205 PGPPL AALRPP + P P Sbjct: 213 APGPPLGSMAALRPPLEEPAAP 234 >5ZLM-A nrPDB Length = 513 Score = 29.3 bits (64), Expect = 4.5, Method: Composition-based stats. Identities = 11/47 (23%), Positives = 20/47 (42%), Gaps = 1/47 (2%) Query: 273 KEEYADPFALAQHKCSRIVRVEYRCPECAKVFSCPANLASHRRWHKP 319 K +Y + QH+ + +R + P L +++RWH P Sbjct: 351 KPKYLASYPSVQHERIQNIRTLKLAGT-QDEYGRPVLLLNNKRWHDP 396 >5XJC-x nrPDB Length = 703 Score = 28.5 bits (62), Expect = 8.0, Method: Composition-based stats. Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 23/67 (34%) Query: 34 PSCGGARAEPPAPSPVPGPLPPPPPAERAHAALAAALACAPGPQPPPQ---------GPR 84 P G + PAP P PG PPP ++ +PG QPPPQ P Sbjct: 581 PHPGLHPHQTPAPLPNPGLYPPP-------------VSMSPG-QPPPQQLLAPTYFSAPG 626 Query: 85 AAHFGNP 91 +FGNP Sbjct: 627 VMNFGNP 633 >5NUS-B nrPDB Length = 113 Score = 28.1 bits (61), Expect = 10.0, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 3/44 (6%) Query: 295 YRCPECAKVFSCPANLASHRRWHKPRPAPAAARAPEPEAAARAE 338 Y+CP C K F ++ +H H P P+ A + Sbjct: 53 YKCPTCGKHFCIDCDVFAHEVIHN---CPGCQADMRPKQDASSN 93 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.132 0.410 Lambda K H 0.267 0.0405 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,045,297 Number of Sequences: 36641 Number of extensions: 1160731 Number of successful extensions: 8403 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 174 Number of HSP's successfully gapped in prelim test: 107 Number of HSP's that attempted gapping in prelim test: 5002 Number of HSP's gapped (non-prelim): 2045 length of query: 510 length of database: 10,336,785 effective HSP length: 101 effective length of query: 409 effective length of database: 6,636,044 effective search space: 2714141996 effective search space used: 2714141996 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 61 (28.1 bits)