BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q01080 (415 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 5M5W-M nrPDB 837 0.0 3NFI-A nrPDB 473 e-134 3NFF-A nrPDB 144 6e-35 3NFG-A nrPDB 117 1e-26 3EEX-A nrPDB 35 0.082 2OY7-A nrPDB 32 0.37 2AF5-A nrPDB 29 3.6 2FKG-A nrPDB 29 4.6 2FKJ-A nrPDB 28 6.3 6CR2-A nrPDB 28 7.0 5ZLG-A nrPDB 28 7.7 5NNO-A nrPDB 28 8.5 >5M5W-M nrPDB Length = 415 Score = 837 bits (2162), Expect = 0.0, Method: Compositional matrix adjust. Identities = 415/415 (100%), Positives = 415/415 (100%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL Sbjct: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 Query: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR 120 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR Sbjct: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR 120 Query: 121 PSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDE 180 PSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDE Sbjct: 121 PSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDE 180 Query: 181 ITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNS 240 ITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNS Sbjct: 181 ITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNS 240 Query: 241 KYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILS 300 KYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILS Sbjct: 241 KYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILS 300 Query: 301 RFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKV 360 RFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKV Sbjct: 301 RFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKV 360 Query: 361 VSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR 415 VSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR Sbjct: 361 VSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR 415 >3NFI-A nrPDB Length = 237 Score = 473 bits (1216), Expect = e-134, Method: Compositional matrix adjust. Identities = 231/233 (99%), Positives = 233/233 (100%) Query: 171 DLPTRAQLDEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKK 230 DLPTRAQ+DEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKK Sbjct: 5 DLPTRAQMDEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKK 64 Query: 231 LELFPYQNNSKYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSP 290 LELFPYQNNSKYVAKKLDSLTQPSQMTKLQ+LYYLSLLLGVYENRRVNNKTKLLERLNSP Sbjct: 65 LELFPYQNNSKYVAKKLDSLTQPSQMTKLQMLYYLSLLLGVYENRRVNNKTKLLERLNSP 124 Query: 291 PEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLA 350 PEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLA Sbjct: 125 PEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLA 184 Query: 351 HELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKL 403 HELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKL Sbjct: 185 HELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKL 237 >3NFF-A nrPDB Length = 122 Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 72/124 (58%), Positives = 93/124 (75%), Gaps = 5/124 (4%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 M KRS++ I+S Q+ PSV V +FFKG R P DT F LYKK+K +D+FVLHGENERL Sbjct: 4 MGEKRSIA---IDSYQEDPSVVVSNFFKGVRVPKDTEFQLYKKRK--QDQFVLHGENERL 58 Query: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR 120 EY+G TD + +NQY+VGL++ + I LY+APV+ SK+VSK SKNL+GP+IKSK DTR Sbjct: 59 EYDGETDELTTKTNQYMVGLYDKQSGKINLYRAPVVTSKIVSKFSKNLKGPEIKSKGDTR 118 Query: 121 PSAL 124 A+ Sbjct: 119 YGAM 122 >3NFG-A nrPDB Length = 102 Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 58/103 (56%), Positives = 76/103 (73%), Gaps = 5/103 (4%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 M KRS++ I+S Q+ PSV V +FFKG R P DT F LYKK+K +D+FVLHGENERL Sbjct: 4 MGEKRSIA---IDSYQEDPSVVVSNFFKGVRVPKDTEFQLYKKRK--QDQFVLHGENERL 58 Query: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSK 103 EY+G TD + +NQY+VGL++ + I LY+APV+ SK+VSK Sbjct: 59 EYDGETDELTTKTNQYMVGLYDKQSGKINLYRAPVVTSKIVSK 101 >3EEX-A nrPDB Length = 320 Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust. Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGY-TDSSSQASN---QYVV-GLFNPEK 85 RA +TF+L+ +K + + + RLEY G +D S +A YV+ G EK Sbjct: 163 RADKSSTFELFNEKGELSFKLITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 222 Query: 86 KSIQLYKAPVLVSKVVSKS 104 ++ + + V +SK +SKS Sbjct: 223 TTLVVKEGTVTLSKNISKS 241 >2OY7-A nrPDB Length = 320 Score = 32.3 bits (72), Expect = 0.37, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 5/79 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGY-TDSSSQASN---QYVV-GLFNPEK 85 RA +T++ + +K ++++ + RLEY G +D S +A YV+ G EK Sbjct: 163 RADKSSTYEKFNEKGEVSEKYITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 222 Query: 86 KSIQLYKAPVLVSKVVSKS 104 ++ + + V +SK +SKS Sbjct: 223 TTLVVKEGTVTLSKNISKS 241 >2AF5-A nrPDB Length = 297 Score = 29.3 bits (64), Expect = 3.6, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGY-TDSSSQASN---QYVV-GLFNPEK 85 RA +T + + +K ++ + + RLEY G +D S +A YV+ G EK Sbjct: 140 RADKSSTEEKFNEKGEVSEKIITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 199 Query: 86 KSIQLYKAPVLVSKVVSKS 104 ++ + + V +SK +SKS Sbjct: 200 TTLVVKEGTVTLSKNISKS 218 >2FKG-A nrPDB Length = 320 Score = 28.9 bits (63), Expect = 4.6, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGY-TDSSSQASN---QYVV-GLFNPEK 85 RA +T + + +K ++ + + RLEY G +D S +A YV+ G EK Sbjct: 163 RADKSSTEEKFNEKGEVSEKIITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 222 Query: 86 KSIQLYKAPVLVSKVVSKS 104 ++ + + V +SK +SKS Sbjct: 223 TTLVVKEGTVTLSKNISKS 241 >2FKJ-A nrPDB Length = 366 Score = 28.5 bits (62), Expect = 6.3, Method: Compositional matrix adjust. Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGY-TDSSSQASN---QYVV-GLFNPEK 85 RA +T + + +K ++ + + RLEY G +D S +A YV+ G EK Sbjct: 209 RADKSSTEEKFNEKGEVSEKIITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 268 Query: 86 KSIQLYKAPVLVSKVVSKS 104 ++ + + V +SK +SKS Sbjct: 269 TTLVVKEGTVTLSKNISKS 287 >6CR2-A nrPDB Length = 477 Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust. Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 8/91 (8%) Query: 87 SIQLYKAPVLVSKVVSK-----SSKNLRGPKIKSKSDTRPSALRNALGEAFGTKKAKKAI 141 + Q +K V K +++ +S++L+G +++SK D+ + L + L F Sbjct: 133 AFQGHKGVFDVCKTIAEITIYTASRSLQGKEVRSKFDSTFAELYHNLDMGFAPINFMLPW 192 Query: 142 ADLERNR---IDSDKLTDSAIDIVDSVRTAS 169 A L NR KLT++ ++I+ + R A Sbjct: 193 APLPHNRKRDAAQRKLTETYMEIIKARRQAG 223 >5ZLG-A nrPDB Length = 292 Score = 28.1 bits (61), Expect = 7.7, Method: Compositional matrix adjust. Identities = 13/53 (24%), Positives = 25/53 (47%) Query: 328 ILCYILAIIMHLDNFIVEITPLAHELNLKPSKVVSLFRVLGAIVKGATVAQAE 380 ++CY+L ++ F++ PL+ L P V S + G ++ A + E Sbjct: 128 VICYLLQLLSGFSVFLLPWAPLSLRAFLMPIHVYSGIVIFGTVIATALMGLTE 180 >5NNO-A nrPDB Length = 546 Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 176 AQLDEITSNDRPTPLANIDATD-VEQIYPIESIIPKKELQFIRVSSILKEAD-KEKKLEL 233 + DE T PT L NID T V Q I+P L + ILK + +EK L L Sbjct: 338 GEADEATLTIAPTILTNIDPTHPVMQEEIFGPILPV--LTYENEKDILKIINSREKPLAL 395 Query: 234 FPYQNNSKYV 243 + + NN +++ Sbjct: 396 YVFSNNKRFI 405 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 5M5W-M nrPDB 767 0.0 3NFI-A nrPDB 464 e-131 3NFF-A nrPDB 211 4e-55 3NFG-A nrPDB 175 3e-44 Sequences not found previously or not previously below threshold: 5NTF-A nrPDB 32 0.65 3EEX-A nrPDB 32 0.65 5B16-A nrPDB 31 1.1 6CR2-A nrPDB 31 1.3 5NNO-A nrPDB 30 1.6 2OY7-A nrPDB 30 1.8 2QEN-A nrPDB 28 7.3 1OSP-O nrPDB 28 9.0 CONVERGED! >5M5W-M nrPDB Length = 415 Score = 767 bits (1980), Expect = 0.0, Method: Composition-based stats. Identities = 415/415 (100%), Positives = 415/415 (100%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL Sbjct: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 Query: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR 120 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR Sbjct: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR 120 Query: 121 PSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDE 180 PSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDE Sbjct: 121 PSALRNALGEAFGTKKAKKAIADLERNRIDSDKLTDSAIDIVDSVRTASKDLPTRAQLDE 180 Query: 181 ITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNS 240 ITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNS Sbjct: 181 ITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKKLELFPYQNNS 240 Query: 241 KYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILS 300 KYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILS Sbjct: 241 KYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSPPEILVDGILS 300 Query: 301 RFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKV 360 RFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKV Sbjct: 301 RFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLAHELNLKPSKV 360 Query: 361 VSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR 415 VSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR Sbjct: 361 VSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKLPEMTRRGRGPRR 415 >3NFI-A nrPDB Length = 237 Score = 464 bits (1193), Expect = e-131, Method: Composition-based stats. Identities = 231/233 (99%), Positives = 233/233 (100%) Query: 171 DLPTRAQLDEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKK 230 DLPTRAQ+DEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKK Sbjct: 5 DLPTRAQMDEITSNDRPTPLANIDATDVEQIYPIESIIPKKELQFIRVSSILKEADKEKK 64 Query: 231 LELFPYQNNSKYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLERLNSP 290 LELFPYQNNSKYVAKKLDSLTQPSQMTKLQ+LYYLSLLLGVYENRRVNNKTKLLERLNSP Sbjct: 65 LELFPYQNNSKYVAKKLDSLTQPSQMTKLQMLYYLSLLLGVYENRRVNNKTKLLERLNSP 124 Query: 291 PEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLA 350 PEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLA Sbjct: 125 PEILVDGILSRFTVIKPGQFGRSKDRSYFIDPQNEDKILCYILAIIMHLDNFIVEITPLA 184 Query: 351 HELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKL 403 HELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKL Sbjct: 185 HELNLKPSKVVSLFRVLGAIVKGATVAQAEAFGIPKSTAASYKIATMKVPFKL 237 >3NFF-A nrPDB Length = 122 Score = 211 bits (538), Expect = 4e-55, Method: Composition-based stats. Identities = 72/124 (58%), Positives = 93/124 (75%), Gaps = 5/124 (4%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 M KRS++ I+S Q+ PSV V +FFKG R P DT F LYKK+K +D+FVLHGENERL Sbjct: 4 MGEKRSIA---IDSYQEDPSVVVSNFFKGVRVPKDTEFQLYKKRK--QDQFVLHGENERL 58 Query: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIKSKSDTR 120 EY+G TD + +NQY+VGL++ + I LY+APV+ SK+VSK SKNL+GP+IKSK DTR Sbjct: 59 EYDGETDELTTKTNQYMVGLYDKQSGKINLYRAPVVTSKIVSKFSKNLKGPEIKSKGDTR 118 Query: 121 PSAL 124 A+ Sbjct: 119 YGAM 122 >3NFG-A nrPDB Length = 102 Score = 175 bits (444), Expect = 3e-44, Method: Composition-based stats. Identities = 58/104 (55%), Positives = 76/104 (73%), Gaps = 5/104 (4%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 M KRS++ I+S Q+ PSV V +FFKG R P DT F LYKK+K +D+FVLHGENERL Sbjct: 4 MGEKRSIA---IDSYQEDPSVVVSNFFKGVRVPKDTEFQLYKKRK--QDQFVLHGENERL 58 Query: 61 EYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKS 104 EY+G TD + +NQY+VGL++ + I LY+APV+ SK+VSK Sbjct: 59 EYDGETDELTTKTNQYMVGLYDKQSGKINLYRAPVVTSKIVSKF 102 >5NTF-A nrPDB Length = 520 Score = 31.5 bits (70), Expect = 0.65, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 47/116 (40%), Gaps = 7/116 (6%) Query: 6 SVSEIEIESVQDQPSVAVGSFF-------KGFRAPSDTTFDLYKKKKSEKDEFVLHGENE 58 +V ++++ + + + S F R + Y +E + V GE Sbjct: 24 NVEFTDVDAYKKTHTAGLASTFVVILGTHAQLREDALKELPFYCPAVAEAIQRVKKGETY 83 Query: 59 RLEYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPKIK 114 + EG + +++ + +VG E P +V+ ++S + + ++GP+ K Sbjct: 84 AVLAEGVKNEANERFVRVLVGEVPSEASRTNCPARPDVVASLLSAALEEIKGPETK 139 >3EEX-A nrPDB Length = 320 Score = 31.5 bits (70), Expect = 0.65, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 5/81 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGYTDSSSQASNQ----YVV-GLFNPEK 85 RA +TF+L+ +K + + + RLEY G S + + YV+ G EK Sbjct: 163 RADKSSTFELFNEKGELSFKLITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 222 Query: 86 KSIQLYKAPVLVSKVVSKSSK 106 ++ + + V +SK +SKS + Sbjct: 223 TTLVVKEGTVTLSKNISKSGE 243 >5B16-A nrPDB Length = 986 Score = 30.8 bits (68), Expect = 1.1, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 55 GENERLEYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLVSKVVSKSSKNLRGPK-- 112 G N+R+E+ G + A+ + + + + L ++ ++ ++ +K ++ L + Sbjct: 754 GHNQRMEFLGDSIMQLVATEYLFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEYA 813 Query: 113 IKSKSDTRPSALR 125 I + RP ALR Sbjct: 814 ITNDKTKRPVALR 826 >6CR2-A nrPDB Length = 477 Score = 30.8 bits (68), Expect = 1.3, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 61/139 (43%), Gaps = 14/139 (10%) Query: 38 FDLYKKKKSEKDEFVLHGENERLEYEGYTDSSSQASNQYVVGLFNPEKKSIQLYKAPVLV 97 +D K E+ +FV +G L + +++ V F + Q +K V Sbjct: 90 YDCPNAKLMEQKKFVKYG----LTSDALRSYVPLITDE--VESFVKNSPAFQGHKGVFDV 143 Query: 98 SKVVSK-----SSKNLRGPKIKSKSDTRPSALRNALGEAFGTKKAKKAIADLERNR---I 149 K +++ +S++L+G +++SK D+ + L + L F A L NR Sbjct: 144 CKTIAEITIYTASRSLQGKEVRSKFDSTFAELYHNLDMGFAPINFMLPWAPLPHNRKRDA 203 Query: 150 DSDKLTDSAIDIVDSVRTA 168 KLT++ ++I+ + R A Sbjct: 204 AQRKLTETYMEIIKARRQA 222 >5NNO-A nrPDB Length = 546 Score = 30.4 bits (67), Expect = 1.6, Method: Composition-based stats. Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%) Query: 176 AQLDEITSNDRPTPLANIDATD-VEQIYPIESIIPKKELQFIRVSSILKEAD-KEKKLEL 233 + DE T PT L NID T V Q I+P L + ILK + +EK L L Sbjct: 338 GEADEATLTIAPTILTNIDPTHPVMQEEIFGPILPV--LTYENEKDILKIINSREKPLAL 395 Query: 234 FPYQNNSKYV 243 + + NN +++ Sbjct: 396 YVFSNNKRFI 405 >2OY7-A nrPDB Length = 320 Score = 30.0 bits (66), Expect = 1.8, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 5/81 (6%) Query: 31 RAPSDTTFDLYKKKKSEKDEFVLHGENERLEYEGYTDSSSQASNQ----YVV-GLFNPEK 85 RA +T++ + +K ++++ + RLEY G S + + YV+ G EK Sbjct: 163 RADKSSTYEKFNEKGEVSEKYITRADGTRLEYTGIKSDGSGKAKEVLKGYVLEGTLTAEK 222 Query: 86 KSIQLYKAPVLVSKVVSKSSK 106 ++ + + V +SK +SKS + Sbjct: 223 TTLVVKEGTVTLSKNISKSGE 243 >2QEN-A nrPDB Length = 350 Score = 28.1 bits (61), Expect = 7.3, Method: Composition-based stats. Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 16/70 (22%) Query: 227 KEKKLELFPYQNNSKYVAKKLDSLTQPSQMTKLQLLYYLSLLLGVYENRRVNNKTKLLER 286 K ++ ++F + S+ + + L++ Y L+LLLG+ RRV + L Sbjct: 8 KTRREDIFDREEESRKLEESLEN-------------YPLTLLLGI---RRVGKSSLLRAF 51 Query: 287 LNSPPEILVD 296 LN P IL+D Sbjct: 52 LNERPGILID 61 >1OSP-O nrPDB Length = 257 Score = 27.7 bits (60), Expect = 9.0, Method: Composition-based stats. Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 20/188 (10%) Query: 1 MSVKRSVSEIEIESVQDQPSVAVGSFFKGFRAPSDTTFDLYKKKKSEKDEFVLHGENERL 60 +++ + + +E ++ V K +T + + +K ++ + + RL Sbjct: 72 LTISDDLGQTTLEVFKEDGKTLVSK--KVTSKDKSSTEEKFNEKGEVSEKIITRADGTRL 129 Query: 61 EYEGYTDSSSQASNQ----YVV-GLFNPEKKSIQLYKAPVLVSKVVSKSSK-NLRGPKIK 114 EY G S + + YV+ G EK ++ + + V +SK +SKS + ++ Sbjct: 130 EYTGIKSDGSGKAKEVLKGYVLEGTLTAEKTTLVVKEGTVTLSKNISKSGEVSVELNDTD 189 Query: 115 SKSDTRPSALRNA----LGEAFGTKKAKKAIADLER----NRIDSD--KLTDSAIDI--V 162 S + T+ +A N+ L +KK K + E + DS+ KL SA++I + Sbjct: 190 SSAATKKTAAWNSGTSTLTITVNSKKTKDLVFTKENTITVQQYDSNGTKLEGSAVEITKL 249 Query: 163 DSVRTASK 170 D ++ A K Sbjct: 250 DEIKNALK 257 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.310 0.136 0.386 Lambda K H 0.267 0.0402 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,840,522 Number of Sequences: 36641 Number of extensions: 589407 Number of successful extensions: 1183 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 36 Number of HSP's that attempted gapping in prelim test: 1151 Number of HSP's gapped (non-prelim): 58 length of query: 415 length of database: 10,336,785 effective HSP length: 100 effective length of query: 315 effective length of database: 6,672,685 effective search space: 2101895775 effective search space used: 2101895775 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.7 bits) S2: 60 (27.7 bits)