BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= Q00582 (310 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4ARZ-A nrPDB 633 0.0 6CES-A nrPDB 311 2e-85 6EHR-F nrPDB 78 5e-15 3R7W-B nrPDB 72 3e-13 6CES-C nrPDB 65 3e-11 3LLU-A nrPDB 62 3e-10 2Q3F-A nrPDB 58 6e-09 2NTY-C nrPDB 39 0.003 5CLL-A nrPDB 39 0.004 1TU4-A nrPDB 38 0.006 5UWI-A nrPDB 38 0.006 5XC3-A nrPDB 38 0.007 2N1B-A nrPDB 38 0.007 3BFK-A nrPDB 37 0.008 4KYI-B nrPDB 37 0.010 2HEI-A nrPDB 37 0.015 5UB8-A nrPDB 36 0.017 3CPJ-B nrPDB 36 0.023 3E5H-A nrPDB 35 0.030 2GJ9-A nrPDB 35 0.042 3TSO-A nrPDB 35 0.042 5JCP-B nrPDB 35 0.051 2J0V-A nrPDB 34 0.072 1WMS-A nrPDB 34 0.082 5VCU-A nrPDB 33 0.12 5XR6-A nrPDB 33 0.13 1X3S-A nrPDB 33 0.15 5FBL-B nrPDB 33 0.17 2OCB-A nrPDB 33 0.18 3LVQ-E nrPDB 32 0.24 2WBL-C nrPDB 32 0.26 1BBN-A nrPDB 32 0.27 2F9L-A nrPDB 32 0.29 5YOZ-A nrPDB 32 0.29 3QB7-A nrPDB 32 0.34 3D6T-B nrPDB 32 0.38 4WNR-A nrPDB 32 0.41 1EK0-A nrPDB 32 0.41 3O47-A nrPDB 31 0.60 6O62-A nrPDB 31 0.69 3CUE-F nrPDB 31 0.78 2A5F-A nrPDB 31 0.87 6FAE-B nrPDB 30 0.91 5LDD-C nrPDB 30 0.97 3V70-A nrPDB 30 1.1 1KSG-A nrPDB 30 1.2 4UJ4-A nrPDB 30 1.3 4QXA-A nrPDB 30 1.3 2WWX-A nrPDB 30 1.4 2GF9-A nrPDB 30 1.4 4G01-B nrPDB 30 1.4 1Z6X-A nrPDB 30 1.5 1MOZ-A nrPDB 30 1.5 3L0I-B nrPDB 30 1.5 2AL7-A nrPDB 30 1.6 2J41-A nrPDB 30 1.7 2FWR-A nrPDB 29 2.2 4ILE-A nrPDB 29 2.2 1YZN-A nrPDB 29 2.2 2B6H-A nrPDB 29 2.3 2G3Y-A nrPDB 29 2.4 3ZDU-A nrPDB 29 2.5 5TV4-A nrPDB 29 2.8 3AQ4-A nrPDB 29 3.0 6BBQ-A nrPDB 29 3.1 2POM-A nrPDB 29 3.1 5NZZ-A nrPDB 28 3.5 4BGV-A nrPDB 28 3.6 3RWM-B nrPDB 28 3.7 2F3T-A nrPDB 28 3.9 1D5C-A nrPDB 28 4.1 4MRS-A nrPDB 28 4.2 4ZI3-A nrPDB 28 4.3 4YLG-A nrPDB 28 4.5 5UF8-A nrPDB 28 5.2 5LPN-A nrPDB 28 5.4 5SZJ-A nrPDB 28 7.0 3LRP-A nrPDB 27 8.7 6IF2-B nrPDB 27 9.1 6CEP-A nrPDB 27 9.5 2H16-A nrPDB 27 9.7 2OCY-C nrPDB 27 9.8 >4ARZ-A nrPDB Length = 310 Score = 633 bits (1633), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/310 (100%), Positives = 310/310 (100%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW Sbjct: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 Query: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK Sbjct: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 Query: 121 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVC 180 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVC Sbjct: 121 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVC 180 Query: 181 SLIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDP 240 SLIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDP Sbjct: 181 SLIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDP 240 Query: 241 KRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSNMVCFIVLKDMNIPQELVLE 300 KRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSNMVCFIVLKDMNIPQELVLE Sbjct: 241 KRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSNMVCFIVLKDMNIPQELVLE 300 Query: 301 NIKKAKEFFQ 310 NIKKAKEFFQ Sbjct: 301 NIKKAKEFFQ 310 >6CES-A nrPDB Length = 313 Score = 311 bits (797), Expect = 2e-85, Method: Compositional matrix adjust. Identities = 159/308 (51%), Positives = 212/308 (68%), Gaps = 19/308 (6%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQ 65 +KK+LLMG+SGSGK+SMRSIIF+NY A DTRRLGATIDVEHSH+RFLGN+ LNLWDCGGQ Sbjct: 7 KKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWDCGGQ 66 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 D FMENYFT Q+D+IF+ V+VLI+VFDVES E+ KD+ + L+ + + SPDAKIF L+ Sbjct: 67 DTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKIFCLV 126 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVCSLIPN 185 HKMDLVQ D+R+ +F+ ++L S F TSIWDE+LYKAWS IV LIPN Sbjct: 127 HKMDLVQEDQRDLIFKEREEDLRRLSRPL---ECACFRTSIWDETLYKAWSSIVYQLIPN 183 Query: 186 MSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDPKRFEK 245 + + NL+ F +I+ A E++LFER TFLVI + + H RFEK Sbjct: 184 VQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVH-------------RFEK 230 Query: 246 ISNIMKNFKQSCTKLKSGFKTLILNNN---IYVSELSSNMVCFIVLKDMNIPQELVLENI 302 ISNI+K FK SC+KL + F+++ + N+ ++ +SN +V+ D +IP L NI Sbjct: 231 ISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLINI 290 Query: 303 KKAKEFFQ 310 + A++ F+ Sbjct: 291 RNARKHFE 298 >6EHR-F nrPDB Length = 132 Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 16/129 (12%) Query: 185 NMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDPKRFE 244 N+ + NL+ F +I+ A E++LFER TFLVI + + H RFE Sbjct: 2 NVQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVH-------------RFE 48 Query: 245 KISNIMKNFKQSCTKLKSGFKTLILNNN---IYVSELSSNMVCFIVLKDMNIPQELVLEN 301 KISNI+K FK SC+KL + F+++ + N+ ++ +SN +V+ D +IP L N Sbjct: 49 KISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLIN 108 Query: 302 IKKAKEFFQ 310 I+ A++ F+ Sbjct: 109 IRNARKHFE 117 >3R7W-B nrPDB Length = 331 Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 11/183 (6%) Query: 9 LLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDVF 68 +LLMG GKSS+ ++F N DT L +T + H L + L + + GQ Sbjct: 2 VLLMGVRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLEHFSTL--IDLAVMELPGQ--- 56 Query: 69 MENYFTKQKD--HIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 NYF D +F+ V L++V D + E + I A ++ K +P I VL+H Sbjct: 57 -LNYFEPSYDSERLFKSVGALVYVIDSQD-EYINAITNLAMIIEYAYKVNPSINIEVLIH 114 Query: 127 KMDLVQLDKREELFQIMMKNLSETSSEFGFPNL-IGFP-TSIWDESLYKAWSQIVCSLIP 184 K+D + D + + + +M+ E E G + + F TSI+D S+Y+A+S+IV LIP Sbjct: 115 KVDGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFDHSIYEAFSRIVQKLIP 174 Query: 185 NMS 187 +S Sbjct: 175 ELS 177 >6CES-C nrPDB Length = 399 Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 52/197 (26%), Positives = 100/197 (50%), Gaps = 9/197 (4%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 +++ ++LLMG SGK+S++ ++F S +T L +T + + + +WD Sbjct: 59 SSKPRILLMGLRRSGKNSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFP 118 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVEST--EVLKDIEIFAKALKQLRKYSPDAKI 121 GQ F + F + IF+ LI+V D + E L + I + + K +PD Sbjct: 119 GQMDFFDPTFDYEM--IFRGTGALIYVIDAQDDYMEALTRLHI---TVSKAYKVNPDMNF 173 Query: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFP--NLIGFPTSIWDESLYKAWSQIV 179 V +HK+D + D + E + + + ++ ++ G +L + TSI+D S+++A+S++V Sbjct: 174 EVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVV 233 Query: 180 CSLIPNMSNHQSNLKKF 196 LIP + ++ L F Sbjct: 234 QKLIPQLPTLENLLNIF 250 >3LLU-A nrPDB Length = 196 Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust. Identities = 50/184 (27%), Positives = 93/184 (50%), Gaps = 9/184 (4%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 ++ ++LLMG SGKSS++ ++F S +T L +T + + + +WD Sbjct: 18 GSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFP 77 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVEST--EVLKDIEIFAKALKQLRKYSPDAKI 121 GQ F + F + IF+ LI+V D + E L + I + + K +PD Sbjct: 78 GQMDFFDPTFDYEM--IFRGTGALIYVIDAQDDYMEALTRLHI---TVSKAYKVNPDMNF 132 Query: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFP--NLIGFPTSIWDESLYKAWSQIV 179 V +HK+D + D + E + + + ++ ++ G +L + TSI+D S+++A+S++V Sbjct: 133 EVFIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVV 192 Query: 180 CSLI 183 LI Sbjct: 193 QKLI 196 >2Q3F-A nrPDB Length = 181 Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 5/181 (2%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQ 65 + ++LLMG SGKSS++ ++F S +T L +T + + + +WD GQ Sbjct: 4 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQ 63 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 F + F + IF+ LI V D + + ++ + + + K + D V + Sbjct: 64 IDFFDPTFDYEM--IFRGTGALIFVIDSQD-DYMEALARLHLTVTRAYKVNTDINFEVFI 120 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFP--NLIGFPTSIWDESLYKAWSQIVCSLI 183 HK+D + D + E + + + ++ ++ G +L + TSI+D S+++A+S++V LI Sbjct: 121 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIFEAFSKVVQKLI 180 Query: 184 P 184 P Sbjct: 181 P 181 >2NTY-C nrPDB Length = 180 Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 61/131 (46%), Gaps = 10/131 (7%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNL 59 MS++ K + +G GK+ M +I + F T + D +++ GN + L L Sbjct: 1 MSASRFIKCVTVGDGAVGKTCM--LISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGL 58 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ E+Y + + ++ V I F + S +++ K + +LR Y+P Sbjct: 59 WDTAGQ----EDY-NRLRPLSYRGADVFILAFSLISKASYENVA--KKWIPELRHYAPGV 111 Query: 120 KIFVLLHKMDL 130 I ++ K+DL Sbjct: 112 PIILVGTKLDL 122 >5CLL-A nrPDB Length = 191 Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust. Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 11/99 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRF---LGNMTLNLWDCGG 64 KL+L+G G+GK++ + + + ++ AT+ VE L F G + N+WD G Sbjct: 12 KLVLVGDGGTGKTTF---VKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 68 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIE 103 Q+ F +D + Q I +FDV S K++ Sbjct: 69 QE-----KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVP 102 >1TU4-A nrPDB Length = 171 Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust. Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 21/140 (15%) Query: 8 KLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGA-----TIDVEHSHLRFLGNMTLNLWD 61 KL+L+G S GKSS+ + + F +GA T+ ++ + ++F +WD Sbjct: 9 KLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKF------EIWD 62 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GQ E Y + + ++ Q I V+D+ + E + + K L+ R+ SP+ I Sbjct: 63 TAGQ----ERYHSLAPMY-YRGAQAAIVVYDITNEESFARAKNWVKELQ--RQASPNIVI 115 Query: 122 FVLLHKMDLVQLDKREELFQ 141 + +K DL +KR FQ Sbjct: 116 ALSGNKADLA--NKRAVDFQ 133 >5UWI-A nrPDB Length = 237 Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRF---LGNMTLNLWDCGG 64 KL+L+G G+GK++ + + + ++ AT+ VE L F G + N+WD G Sbjct: 33 KLVLVGDGGTGKTTF---VKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 89 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDI 102 Q+ F +D + Q I +FDV S K++ Sbjct: 90 QE-----KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV 122 >5XC3-A nrPDB Length = 176 Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust. Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%) Query: 4 NNRKKLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 NN K++L+G SG GKSS+ +F+ + + +GA + + + LN+WD Sbjct: 3 NNGYKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDT 62 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALK 110 GQ E + + K + + L+ VFDV E D+ + L+ Sbjct: 63 AGQ----ERFRSITKMYYTNSLGCLV-VFDVTDRESFDDVYYWINDLR 105 >2N1B-A nrPDB Length = 261 Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust. Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 11/98 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRF---LGNMTLNLWDCGG 64 KL+L+G G+GK++ + + + ++ AT+ VE L F G + N+WD G Sbjct: 53 KLVLVGDGGTGKTT---FVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIKFNVWDTAG 109 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDI 102 Q+ F +D + Q I +FDV S K++ Sbjct: 110 QE-----KFGGLRDGYYIQAQCAIIMFDVTSRVTYKNV 142 >3BFK-A nrPDB Length = 181 Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust. Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 29/170 (17%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS----HLRFLGNMTLNLWDCG 63 K++L+G SG GKS++ S + +++ +TI VE + L+ + +WD Sbjct: 9 KIVLIGDSGVGKSNLLSRFTRDEFNLESK---STIGVEFATKSIQLKNNKIIKAQIWDTA 65 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 GQ E Y + V L+ V+D+ ++IE K LK+LR + D+ I + Sbjct: 66 GQ----ERYRAITSAYYRGAVGALL-VYDITKKNSFENIE---KWLKELRD-NADSNIVI 116 Query: 124 LL--HKMDL-----------VQLDKREELFQIMMKNLSETSSEFGFPNLI 160 LL +K DL Q K+E+L I L T+ E F L+ Sbjct: 117 LLVGNKSDLKHLRVINDNDATQYAKKEKLAFIETSALEATNVELAFHQLL 166 >4KYI-B nrPDB Length = 170 Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust. Identities = 36/140 (25%), Positives = 66/140 (47%), Gaps = 21/140 (15%) Query: 8 KLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGA-----TIDVEHSHLRFLGNMTLNLWD 61 KL+L+G S GKSS+ + + + +GA T+ ++ + ++F +WD Sbjct: 11 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKF------EIWD 64 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 G +E Y + + ++ Q I V+D+ +T+ + + K L+ R+ SP+ I Sbjct: 65 TAG----LERYHSLAPMY-YRGAQAAIVVYDITNTDTFARAKNWVKELQ--RQASPNIVI 117 Query: 122 FVLLHKMDLVQLDKREELFQ 141 + +K DL KR FQ Sbjct: 118 ALAGNKADLA--SKRAVEFQ 135 >2HEI-A nrPDB Length = 179 Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust. Identities = 32/130 (24%), Positives = 60/130 (46%), Gaps = 19/130 (14%) Query: 8 KLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGA-----TIDVEHSHLRFLGNMTLNLWD 61 KL+L+G S GKSS+ + + + +GA ++ ++ + ++F +WD Sbjct: 10 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKF------EIWD 63 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GQ E Y + + ++ Q I V+D+ + E + + K L+ R+ SP I Sbjct: 64 TAGQ----ERYHSLAPMY-YRGAQAAIVVYDITNQETFARAKTWVKELQ--RQASPSIVI 116 Query: 122 FVLLHKMDLV 131 + +K DL Sbjct: 117 ALAGNKADLA 126 >5UB8-A nrPDB Length = 222 Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust. Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 17/131 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFLG-NMTLNLWDCGG 64 K++L+G SG GKS++ S + ++R +TI VE + L G + +WD G Sbjct: 17 KIVLIGDSGVGKSNLLSRFTRDEFNLESR---STIGVEFATRTLEIDGKRVKAQIWDTAG 73 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q E Y + V LI V+D+ TE + + ++ LK+L++++ DA I + Sbjct: 74 Q----ERYRAITSAYYRGAVGALI-VYDIAKTESYESV---SRWLKELKEHA-DANIIIE 124 Query: 125 L--HKMDLVQL 133 L +K DL L Sbjct: 125 LVGNKSDLDHL 135 >3CPJ-B nrPDB Length = 223 Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust. Identities = 50/201 (24%), Positives = 90/201 (44%), Gaps = 27/201 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFLG-NMTLNLWDCGG 64 K++L+G SG GKS++ S N D++ +TI VE + L G + +WD G Sbjct: 15 KIVLIGDSGVGKSNLLSRFTKNEFNMDSK---STIGVEFATRTLEIEGKRIKAQIWDTAG 71 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD-AKIFV 123 Q E Y + V LI V+D+ + ++ + L +LR+ + D + + Sbjct: 72 Q----ERYRAITSAYYRGAVGALI-VYDISKSSSYENCNHW---LSELRENADDNVAVGL 123 Query: 124 LLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGF--PTSIWDESLYKAWSQIVCS 181 + +K DL L +E S F N + F +++ E++ KA+ +++ + Sbjct: 124 IGNKSDLAHLRAVP----------TEESKTFAQENQLLFTETSALNSENVDKAFEELINT 173 Query: 182 LIPNMSNHQSNLKKFKEIMNA 202 + +S HQ +L NA Sbjct: 174 IYQKVSKHQMDLGDSSANGNA 194 >3E5H-A nrPDB Length = 178 Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust. Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 9/126 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNM--TLNLWDCGGQ 65 K++++G SGK+S+ + F+ + + +D + GN+ TL +WD GGQ Sbjct: 8 KIVVLGDGASGKTSL-TTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 + K D Q ++ V+D+ + + +++E + +K++ + S + L+ Sbjct: 67 TI-----GGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALV 121 Query: 126 -HKMDL 130 +K+DL Sbjct: 122 GNKIDL 127 >2GJ9-A nrPDB Length = 172 Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 21/133 (15%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGG--- 64 K+++ GR +GKSS+ + + +A T G T DV H+ G M L++ D G Sbjct: 6 KVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDG-MPLHIIDTAGLRE 64 Query: 65 -----QDVFMENYFT--KQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSP 117 + + +E + +Q D + MV D +T+ + EI+ + + +L P Sbjct: 65 ASDEVERIGIERAWQEIEQADRVLFMV-------DGTTTDAVDPAEIWPEFIARLPAKLP 117 Query: 118 DAKIFVLLHKMDL 130 I V+ +K D+ Sbjct: 118 ---ITVVRNKADI 127 >3TSO-A nrPDB Length = 178 Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust. Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 17/130 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS-HLRFLGNMTL--NLWDCGG 64 K++L+G SG GK+++ S N + D+R TI VE S LG + +WD G Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSR---TTIGVEFSTRTVMLGTAAVKAQIWDTAG 68 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 +E Y + V L+ VFD+ + +E + LK+L ++ +A I V+ Sbjct: 69 ----LERYRAITSAYYRGAVGALL-VFDLTKHQTYAVVE---RWLKELYDHA-EATIVVM 119 Query: 125 L--HKMDLVQ 132 L +K DL Q Sbjct: 120 LVGNKSDLSQ 129 >5JCP-B nrPDB Length = 419 Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust. Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 34/143 (23%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSI-------------IFSNYSAFDTRRLGATIDVEHS 47 +S+ RKKL+++G GK+ + + +F NY A I+V+ Sbjct: 238 LSAAIRKKLVIVGDGACGKTCLLIVNSKDQFPEVYVPTVFENYV--------ADIEVDGK 289 Query: 48 HLRFLGNMTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAK 107 + L LWD GQ E+Y + + + V++ F ++S + L++I K Sbjct: 290 QVE------LALWDTAGQ----EDY-DRLRPLSYPDTDVILMCFSIDSPDSLENIP--EK 336 Query: 108 ALKQLRKYSPDAKIFVLLHKMDL 130 +++ + P+ I ++ +K DL Sbjct: 337 WTPEVKHFCPNVPIILVGNKKDL 359 >2J0V-A nrPDB Length = 212 Score = 34.3 bits (77), Expect = 0.072, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 62/131 (47%), Gaps = 10/131 (7%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMT-LNL 59 MS + K + +G GK+ M +I + F T + D +++ G + L L Sbjct: 4 MSVSKFIKCVTVGDGAVGKTCM--LICYTSNKFPTDYIPTVFDNFSANVAVDGQIVNLGL 61 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ E+Y ++ + ++ + + F + S +++ K + +LR+++P+ Sbjct: 62 WDTAGQ----EDY-SRLRPLSYRGADIFVLAFSLISKASYENV--LKKWMPELRRFAPNV 114 Query: 120 KIFVLLHKMDL 130 I ++ K+DL Sbjct: 115 PIVLVGTKLDL 125 >1WMS-A nrPDB Length = 177 Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust. Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 6/64 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVE--HSHLRFLGN-MTLNLWDCGG 64 K++L+G G GKSS+ + +N FDT +L TI VE + L G+ +T+ +WD G Sbjct: 9 KVILLGDGGVGKSSLMNRYVTN--KFDT-QLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 65 Query: 65 QDVF 68 Q+ F Sbjct: 66 QERF 69 >5VCU-A nrPDB Length = 208 Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust. Identities = 33/151 (21%), Positives = 75/151 (49%), Gaps = 16/151 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL-GNMTLNLWDCGGQD 66 K +++G GK+++ +I + F + D + ++ + G +++ L+D GQ Sbjct: 13 KCVVVGDGAVGKTAL--LIAYSSGCFPEDYVPTVFDNYNKNIPYGDGIVSIALYDTAGQ- 69 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 E+Y + + + V + F +E+ L++ +K ++L+ Y+PD I ++ Sbjct: 70 ---EDY-DRLRPLSYPDTDVFLVCFSLENPNSLENCH--SKWAEELKHYNPDTPIVLVGT 123 Query: 127 KMDLVQLDKREELF--QIMMKNLSETSSEFG 155 K+DL K++E + ++ K +S ++E G Sbjct: 124 KLDL----KKDEEYVKKLKEKKISPVTTEQG 150 >5XR6-A nrPDB Length = 194 Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust. Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 26/168 (15%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFLGNMT-LNLWDCGG 64 KL+L+G SG GKS++ S N +++ +TI VE + + G + +WD G Sbjct: 27 KLVLIGDSGVGKSNLLSRFTKNEFNLESK---STIGVEFATKTTKVEGKVVKAQIWDTAG 83 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYS-PDAKIFV 123 Q E Y + V L+ ++DV ++ A+ L++LR ++ P+ + + Sbjct: 84 Q----ERYRAITSAYYRGAVGALL-IYDVTRHATFENA---ARWLRELRGHTDPNIVVML 135 Query: 124 LLHKMDLVQL-----------DKREELFQIMMKNLSETSSEFGFPNLI 160 + +K DL L +RE L+ + L T+ E F ++ Sbjct: 136 IGNKCDLRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVL 183 >1X3S-A nrPDB Length = 195 Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust. Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 11/89 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEH--SHLRFLGNMT-LNLWDCGG 64 K+L++G SG GKSS+ ++ FD L ATI V+ + GN L +WD G Sbjct: 17 KILIIGESGVGKSSL--LLRFTDDTFDP-ELAATIGVDFKVKTISVDGNKAKLAIWDTAG 73 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDV 93 Q+ F ++ Q +I V+DV Sbjct: 74 QE-----RFRTLTPSYYRGAQGVILVYDV 97 >5FBL-B nrPDB Length = 221 Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 17/131 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFLG-NMTLNLWDCGG 64 K++L+G SG GKS++ S N +++ +TI VE + ++ G + +WD G Sbjct: 18 KVVLIGDSGVGKSNLLSRFTRNEFNLESK---STIGVEFATRSIQVDGKTIKAQIWDTAG 74 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q E Y + V L+ V+D+ +++E + LK+LR ++ D+ I ++ Sbjct: 75 Q----ERYRAITSAYYRGAVGALL-VYDIAKHLTYENVE---RWLKELRDHA-DSNIVIM 125 Query: 125 L--HKMDLVQL 133 L +K DL L Sbjct: 126 LVGNKSDLRHL 136 >2OCB-A nrPDB Length = 180 Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust. Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 6/64 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVE--HSHLRFLGN-MTLNLWDCGG 64 K++L+G G GKSS+ + +N FD++ TI VE + L G +TL +WD G Sbjct: 9 KVILLGDGGVGKSSLMNRYVTN--KFDSQAF-HTIGVEFLNRDLEVDGRFVTLQIWDTAG 65 Query: 65 QDVF 68 Q+ F Sbjct: 66 QERF 69 >3LVQ-E nrPDB Length = 497 Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust. Identities = 32/138 (23%), Positives = 59/138 (42%), Gaps = 13/138 (9%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATID-VEHSHLRFLGNMTLNLWD 61 SN ++L++G +GK+++ + S +G ++ V + +++F N+WD Sbjct: 319 SNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKF------NVWD 372 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GGQD + H + Q LI V D + + + + R+ DA I Sbjct: 373 VGGQDKIRPLW-----RHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMR-DAII 426 Query: 122 FVLLHKMDLVQLDKREEL 139 + +K DL K E+ Sbjct: 427 LIFANKQDLPDAMKPHEI 444 >2WBL-C nrPDB Length = 180 Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust. Identities = 33/131 (25%), Positives = 60/131 (45%), Gaps = 10/131 (7%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNL 59 MS+ K + +G GK+ M +I + F T + D +++ G+ + L L Sbjct: 1 MSTARFIKCVTVGDGAVGKTCM--LISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGL 58 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ E+Y + + ++ V + F + S ++I K L +L+ Y+P Sbjct: 59 WDTAGQ----EDY-NRLRPLSYRGADVFLLAFSLISKASYENIH--KKWLPELKHYAPGI 111 Query: 120 KIFVLLHKMDL 130 I ++ K+DL Sbjct: 112 PIVLVGTKLDL 122 >1BBN-A nrPDB Length = 133 Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 27 FSNYSAFDTRRLGATIDVEHSH---LRFLGNMTLNLWDCGG 64 F ++ DTR LGAT H H +RFL + NLW G Sbjct: 59 FYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAG 99 >2F9L-A nrPDB Length = 199 Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust. Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 17/131 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFLG-NMTLNLWDCGG 64 K++L+G SG GKS++ S N +++ +TI VE + ++ G + +WD G Sbjct: 7 KVVLIGDSGVGKSNLLSRFTRNEFNLESK---STIGVEFATRSIQVDGKTIKAQIWDTAG 63 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q E Y + V L+ V+D+ +++E + LK+LR ++ D+ I ++ Sbjct: 64 Q----ERYRRITSAYYRGAVGALL-VYDIAKHLTYENVE---RWLKELRDHA-DSNIVIM 114 Query: 125 L--HKMDLVQL 133 L +K DL L Sbjct: 115 LVGNKSDLRHL 125 >5YOZ-A nrPDB Length = 177 Score = 32.3 bits (72), Expect = 0.29, Method: Compositional matrix adjust. Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 21/133 (15%) Query: 8 KLLLMGRSGSGKSSM-----RSIIFSNY-SAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 K++++G SG+GKSS+ R+ +N + L T+ ++ L++ +WD Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAFLSKTVMIDGRALKY------EIWD 70 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 G + F ++ + V+D+ ++E LK + + +K+LR + + I Sbjct: 71 TAGLE-----RFRSLAPIYYRGASGALVVYDITNSESLKKAQTW---IKELRANADPSLI 122 Query: 122 FVLL-HKMDLVQL 133 VL+ +K DL L Sbjct: 123 IVLVGNKKDLGSL 135 >3QB7-A nrPDB Length = 132 Score = 32.0 bits (71), Expect = 0.34, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 27 FSNYSAFDTRRLGATIDVEHSH---LRFLGNMTLNLWDCGG 64 F ++ DTR LGAT H H +RFL + NLW G Sbjct: 58 FYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAG 98 >3D6T-B nrPDB Length = 171 Score = 32.0 bits (71), Expect = 0.38, Method: Compositional matrix adjust. Identities = 29/157 (18%), Positives = 72/157 (45%), Gaps = 15/157 (9%) Query: 8 KLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG----NMTLNLWDC 62 KL+++G +GSGK++ ++ ++ + S + IDV+ ++ ++ LN+WD Sbjct: 2 KLMIVGNTGSGKTTLLQQLMKTKKSDLGMQSATVGIDVKDWPIQIRDKRKRDLVLNVWDF 61 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIF 122 G++ F + H + + V+D+ + +++ L ++ + + + Sbjct: 62 AGREEFYSTH-----PHFMTQRALYLAVYDLSKGQA--EVDAMKPWLFNIKARASSSPVI 114 Query: 123 VLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNL 159 ++ +D+ +R+ M K E ++ GFP + Sbjct: 115 LVGTHLDVSDEKQRKA---CMSKITKELLNKRGFPAI 148 >4WNR-A nrPDB Length = 349 Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust. Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 23/131 (17%) Query: 5 NRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG------NMTLN 58 N K+LL+G +GK+S+ + FD G + +++ G + +N Sbjct: 40 NEVKVLLVGDGEAGKTSLLKRLLG--EGFD----GNEHQTQGINIKKWGFKDKDKEIKVN 93 Query: 59 LWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD 118 WD GGQ++ H F + + +++ ++S + E LK +R + D Sbjct: 94 FWDFGGQEIM-------HATHQFFLSKRSLYILVLDS----RRDEKAEYWLKHIRSFGGD 142 Query: 119 AKIFVLLHKMD 129 + + V L+K+D Sbjct: 143 SPVLVALNKID 153 >1EK0-A nrPDB Length = 170 Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust. Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 27/135 (20%) Query: 8 KLLLMGRSGSGKSSMRSIIFSN----------YSAFDTRRLGATIDVEHSHLRFLGNMTL 57 KL+L+G + GKSS+ SN +AF T+R+ TI+ EH+ + Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRV--TIN-EHT-------VKF 54 Query: 58 NLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSP 117 +WD GQ+ F ++ Q + V+DV + + K L + + S Sbjct: 55 EIWDTAGQE-----RFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHE--QASK 107 Query: 118 DAKIFVLLHKMDLVQ 132 D I ++ +K+D++Q Sbjct: 108 DIIIALVGNKIDMLQ 122 >3O47-A nrPDB Length = 329 Score = 31.2 bits (69), Expect = 0.60, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 54 NMTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIE---IFAKALK 110 N++ +WD GGQD + H FQ Q LI V D E + + + A Sbjct: 208 NISFTVWDVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAED 262 Query: 111 QLRKYSPDAKIFVLLHKMDL 130 +LR DA + V +K DL Sbjct: 263 ELR----DAVLLVFANKQDL 278 >6O62-A nrPDB Length = 184 Score = 30.8 bits (68), Expect = 0.69, Method: Compositional matrix adjust. Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 11/124 (8%) Query: 8 KLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQ 65 KLLL+G SG GKS + + ++ +G ID + + G + L +WD GQ Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIG--IDFKIRTIESKGKRIKLQVWDTAGQ 73 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 + F ++ ++ ++DV + +++E + + + Q + DA+IF++ Sbjct: 74 E-----RFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQ--HANEDAQIFLVG 126 Query: 126 HKMD 129 +K D Sbjct: 127 NKCD 130 >3CUE-F nrPDB Length = 206 Score = 30.8 bits (68), Expect = 0.78, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 13/131 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + FS+ + + +D + + G + L +WD GQ+ Sbjct: 10 KLLLIGNSGVGKSCLL-LRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 68 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL- 125 F ++ +I V+DV E ++++ L+++ +Y+ + +L+ Sbjct: 69 -----RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMW---LQEIDRYATSTVLKLLVG 120 Query: 126 HKMDLVQLDKR 136 +K DL DKR Sbjct: 121 NKCDLK--DKR 129 >2A5F-A nrPDB Length = 175 Score = 30.8 bits (68), Expect = 0.87, Method: Compositional matrix adjust. Identities = 31/138 (22%), Positives = 58/138 (42%), Gaps = 13/138 (9%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATID-VEHSHLRFLGNMTLNLWD 61 N ++L++G +GK+++ + S +G ++ V + +++F N+WD Sbjct: 10 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKF------NVWD 63 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GGQD + H + Q LI V D + + + + R+ DA I Sbjct: 64 VGGQDKIRPLW-----RHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMR-DAII 117 Query: 122 FVLLHKMDLVQLDKREEL 139 + +K DL K E+ Sbjct: 118 LIFANKQDLPDAMKPHEI 135 >6FAE-B nrPDB Length = 213 Score = 30.4 bits (67), Expect = 0.91, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 12/80 (15%) Query: 54 NMTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIE---IFAKALK 110 N++ +WD GGQD + H FQ Q LI V D E + + + A Sbjct: 92 NISFTVWDVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAED 146 Query: 111 QLRKYSPDAKIFVLLHKMDL 130 +LR DA + V +K DL Sbjct: 147 ELR----DAVLLVFANKQDL 162 >5LDD-C nrPDB Length = 207 Score = 30.4 bits (67), Expect = 0.97, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 6/72 (8%) Query: 2 SSNNRKKLLL----MGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMT 56 S ++RKK+LL +G SG GK+S M + +SA +GA + + +T Sbjct: 2 SMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADF-LTREVMVDDRQVT 60 Query: 57 LNLWDCGGQDVF 68 + LWD GQ+ F Sbjct: 61 MQLWDTAGQERF 72 >3V70-A nrPDB Length = 247 Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust. Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 2/35 (5%) Query: 7 KKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGAT 41 ++L+L+GR+G+GKS+ + I F RLGAT Sbjct: 22 RRLILVGRTGAGKSATGNSILGQRRFFS--RLGAT 54 >1KSG-A nrPDB Length = 186 Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust. Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 11/123 (8%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 +LL++G +GK++ I ++ D + T+ L G LN+WD GGQ Sbjct: 20 RLLMLGLDNAGKTT----ILKKFNGEDVDTISPTLGFNIKTLEHRG-FKLNIWDVGGQKS 74 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHK 127 + +Y+ + F+ LI V D + ++D + ++L + + A + + +K Sbjct: 75 -LRSYWR----NYFESTDGLIWVVDSADRQRMQDCQRELQSL-LVEERLAGATLLIFANK 128 Query: 128 MDL 130 DL Sbjct: 129 QDL 131 >4UJ4-A nrPDB Length = 185 Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 17/131 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHS--HLRFLG-NMTLNLWDCGG 64 K++L+G SG GKS++ S N +++ +TI VE + ++ G + +WD G Sbjct: 12 KVVLIGDSGVGKSNLLSRFTRNEFNLESK---STIGVEFATRSIQVDGKTIKAQIWDTAG 68 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 +E Y + V L+ V+D+ +++E + LK+LR ++ D+ I ++ Sbjct: 69 ----LERYRAITSAYYRGAVGALL-VYDIAKHLTYENVE---RWLKELRDHA-DSNIVIM 119 Query: 125 L--HKMDLVQL 133 L +K DL L Sbjct: 120 LVGNKSDLRHL 130 >4QXA-A nrPDB Length = 208 Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 6/64 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVE--HSHLRFLGN-MTLNLWDCGG 64 K++L+G G GKSS+ + +N FD+ +L TI VE + L G+ +T+ +WD G Sbjct: 10 KIILLGDGGVGKSSLMNRYVTN--KFDS-QLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 66 Query: 65 QDVF 68 + F Sbjct: 67 LERF 70 >2WWX-A nrPDB Length = 175 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 10/112 (8%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + F++ + ++ +D + + G + L +WD GQ+ Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD 118 F ++ +I V+DV E +++ + L+++ +Y+ + Sbjct: 69 -----RFRTITSSYYRGAHGIIVVYDVTDQESFNNVK---QWLQEIDRYASE 112 >2GF9-A nrPDB Length = 189 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 15/127 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVE---HSHLRFLGNMTLNLWDCGG 64 KLLL+G S GK+S +F T +T+ ++ + R + L +WD G Sbjct: 24 KLLLIGNSSVGKTSF---LFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAG 80 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD-AKIFV 123 Q E Y T + ++ + ++D+ + E ++ +A Q++ YS D A++ + Sbjct: 81 Q----ERYRTITTAY-YRGAMGFLLMYDIANQESFAAVQDWA---TQIKTYSWDNAQVIL 132 Query: 124 LLHKMDL 130 + +K DL Sbjct: 133 VGNKCDL 139 >4G01-B nrPDB Length = 181 Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust. Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 17/92 (18%) Query: 8 KLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGA-----TIDVEHSHLRFLGNMTLNLWD 61 KL+L+G G+GKSS+ + + F +GA T+ V + ++F +WD Sbjct: 14 KLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKF------EIWD 67 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDV 93 GQ E Y + + ++ I VFDV Sbjct: 68 TAGQ----ERYHSLAPMY-YRGAAAAIIVFDV 94 >1Z6X-A nrPDB Length = 180 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 5/49 (10%) Query: 54 NMTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDI 102 N+ +WD GGQD + H FQ Q LI V D E ++++ Sbjct: 60 NICFTVWDVGGQDRIRPLW-----KHYFQNTQGLIFVVDSNDRERIQEV 103 >1MOZ-A nrPDB Length = 183 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 5/64 (7%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 SN ++L++G G+GK++ I + TI L + N+ LN+WD Sbjct: 14 GSNKELRILILGLDGAGKTT----ILYRLQIGEVVTTKPTIGFNVETLSY-KNLKLNVWD 68 Query: 62 CGGQ 65 GGQ Sbjct: 69 LGGQ 72 >3L0I-B nrPDB Length = 199 Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust. Identities = 26/112 (23%), Positives = 54/112 (48%), Gaps = 10/112 (8%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + F++ + ++ +D + + G + L +WD GQ+ Sbjct: 35 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 93 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD 118 F ++ +I V+DV E +++ + L+++ +Y+ + Sbjct: 94 RFR-----TITSSYYRGAHGIIVVYDVTDQESFNNVK---QWLQEIDRYASE 137 >2AL7-A nrPDB Length = 186 Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust. Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 13/98 (13%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL--GNMTLNL 59 S +L L+G SGK++ ++I S + D I ++R + GN+T+ + Sbjct: 18 GSKEEMELTLVGLQYSGKTTFVNVIASGQFSEDM------IPTVGFNMRKVTKGNVTIKI 71 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 WD GGQ F + + + V ++++ D E Sbjct: 72 WDIGGQPRFRSMW-----ERYCRGVNAIVYMIDAADRE 104 >2J41-A nrPDB Length = 207 Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust. Identities = 41/152 (26%), Positives = 64/152 (42%), Gaps = 37/152 (24%) Query: 4 NNRKKLLLM--GRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 +N K LL++ G SG GK ++R IF + S + ++ +MT Sbjct: 2 DNEKGLLIVLSGPSGVGKGTVRKRIFEDPS---------------TSYKYSISMTTRQMR 46 Query: 62 CGGQDVFMENYFTKQKDHIF------QMVQVLIHVFDVESTEV--LKD---------IEI 104 G D +YF K +D Q ++ +V + T V +KD +EI Sbjct: 47 EGEVDGV--DYFFKTRDAFEALIKDDQFIEYAEYVGNYYGTPVQYVKDTMDEGHDVFLEI 104 Query: 105 FAKALKQLRKYSPDAKIFVLLHKMDLVQLDKR 136 + KQ+RK PDA +F+ L L L +R Sbjct: 105 EVEGAKQVRKKFPDA-LFIFLAPPSLEHLRER 135 >2FWR-A nrPDB Length = 472 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 20/133 (15%) Query: 97 EVLKDI------EIFAKAL--KQLRKYSPDAKIFVLLHKMDLVQLDKREELFQIMMKNLS 148 E+LK++ E+F +L K L KY+ +IFV L + + V+ +KRE++++ ++ Sbjct: 236 EILKEVVGGKVFELFPDSLAGKHLAKYTIK-RIFVPLAEDERVEYEKREKVYKQFLRARG 294 Query: 149 ETSSEFGFPNLIGFPTSIWDESLY---KAWSQIVCSLIPNMSNHQSNLKKFKEIMNAL-- 203 T N I S +DE Y +AW + N ++ ++K +EI+ Sbjct: 295 ITLRRAEDFNKIVM-ASGYDERAYEALRAWEEARRIAF----NSKNKIRKLREILERHRK 349 Query: 204 -EIILFERTTFLV 215 +II+F R LV Sbjct: 350 DKIIIFTRHNELV 362 >4ILE-A nrPDB Length = 184 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 25/98 (25%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNY--------SAFDTRRLGATIDVEHSHLRFLGNMTLNL 59 +L L+G SGK++ ++I S F+ R++ GN+T+ L Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKITK------------GNVTIKL 71 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 WD GGQ F + + + V ++++ D E Sbjct: 72 WDIGGQPRFRSMW-----ERYCRGVSAIVYMVDAADQE 104 >1YZN-A nrPDB Length = 185 Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust. Identities = 34/131 (25%), Positives = 63/131 (48%), Gaps = 13/131 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + FS+ + + +D + + G + L +WD GQ+ Sbjct: 23 KLLLIGNSGVGKSCLL-LRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQE 81 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL- 125 F ++ +I V+DV E ++++ L+++ +Y+ + +L+ Sbjct: 82 -----RFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMW---LQEIDRYATSTVLKLLVG 133 Query: 126 HKMDLVQLDKR 136 +K DL DKR Sbjct: 134 NKCDLK--DKR 142 >2B6H-A nrPDB Length = 192 Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust. Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 12/80 (15%) Query: 54 NMTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTE-VLKDIEIFAKALK-- 110 N+ +WD GGQD + H FQ Q LI V D E V + + K L+ Sbjct: 72 NICFTVWDVGGQDKIRPLW-----RHYFQNTQGLIFVVDSNDRERVQESADELQKMLQED 126 Query: 111 QLRKYSPDAKIFVLLHKMDL 130 +LR DA + V +K D+ Sbjct: 127 ELR----DAVLLVFANKQDM 142 >2G3Y-A nrPDB Length = 211 Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust. Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 22/140 (15%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN----MTL 57 S N +++L+G G GKS++ +I + + D+ D L G + L Sbjct: 33 SGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILL 92 Query: 58 NLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALK---QLRK 114 ++W+ G++ ++ DH Q+ + V+ + D F KA + QLR+ Sbjct: 93 DMWENKGENEWL-------HDHCMQVGDAYLIVYSI------TDRASFEKASELRIQLRR 139 Query: 115 Y--SPDAKIFVLLHKMDLVQ 132 + D I ++ +K DLV+ Sbjct: 140 ARQTEDIPIILVGNKSDLVR 159 >3ZDU-A nrPDB Length = 325 Score = 29.3 bits (64), Expect = 2.5, Method: Compositional matrix adjust. Identities = 22/94 (23%), Positives = 43/94 (45%), Gaps = 14/94 (14%) Query: 90 VFDVESTEVLKDIEIFAKAL--KQLRKYSPDAKIFVLLHKMD------LVQLDKREELFQ 141 VF+ VL +++ + L K+LRKY +F +L +D ++ D + E Sbjct: 79 VFEFIDHTVLDELQHYCHGLESKRLRKY-----LFQILRAIDYLHSNNIIHRDIKPENIL 133 Query: 142 IMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAW 175 + +++ +FGF + P I+D+ + W Sbjct: 134 VSQSGITKLC-DFGFARTLAAPGDIYDDEVATRW 166 >5TV4-A nrPDB Length = 605 Score = 28.9 bits (63), Expect = 2.8, Method: Compositional matrix adjust. Identities = 13/24 (54%), Positives = 18/24 (75%) Query: 7 KKLLLMGRSGSGKSSMRSIIFSNY 30 K + L+GRSGSGKS++ S+I Y Sbjct: 393 KTVALVGRSGSGKSTIASLITRFY 416 >3AQ4-A nrPDB Length = 184 Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 5/39 (12%) Query: 54 NMTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFD 92 N++ +WD GGQD + H FQ Q LI V D Sbjct: 63 NISFTVWDVGGQDKIRPLW-----RHYFQNTQGLIFVVD 96 >6BBQ-A nrPDB Length = 520 Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust. Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 13/138 (9%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATID-VEHSHLRFLGNMTLNLWD 61 N ++L++G +GK+++ + S +G ++ V + +++F N+WD Sbjct: 356 GNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNVETVTYKNVKF------NVWD 409 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GG D + H + Q LI V D + + + + R+ DA I Sbjct: 410 VGGLDKIRPLW-----RHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMR-DAII 463 Query: 122 FVLLHKMDLVQLDKREEL 139 + +K DL K E+ Sbjct: 464 LIFANKQDLPDAMKPHEI 481 >2POM-A nrPDB Length = 372 Score = 28.9 bits (63), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 240 PKRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSN--MVCFIVLKDMNIPQEL 297 P +++KI +K ++ + ++LNN +YV+ + +N ++C + + + Q Sbjct: 147 PPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLN 206 Query: 298 VLENIKKAKEFFQ 310 V + E F+ Sbjct: 207 VDHTTENEDELFR 219 >5NZZ-A nrPDB Length = 504 Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust. Identities = 15/73 (20%), Positives = 35/73 (47%), Gaps = 2/73 (2%) Query: 240 PKRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSN--MVCFIVLKDMNIPQEL 297 P +++KI +K ++ + ++LNN +YV+ + +N ++C + + + Q Sbjct: 145 PPQYQKILERLKTLEREISGGAMAVVAVLLNNKLYVANVGTNRALLCKSTVDGLQVTQLN 204 Query: 298 VLENIKKAKEFFQ 310 V + E F+ Sbjct: 205 VDHTTENEDELFR 217 >4BGV-A nrPDB Length = 323 Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust. Identities = 12/33 (36%), Positives = 22/33 (66%) Query: 98 VLKDIEIFAKALKQLRKYSPDAKIFVLLHKMDL 130 +LK+I I + ++KYSP++KI V+ + D+ Sbjct: 97 LLKNIGIMKSVGEAIKKYSPESKIVVVTNPADI 129 >3RWM-B nrPDB Length = 185 Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust. Identities = 44/198 (22%), Positives = 91/198 (45%), Gaps = 39/198 (19%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRR-LGA-----TIDVEHSHLRFLGNMTLNLWD 61 K++L+G SG GKS++ S ++ +++ +G TI+VE+ ++ +WD Sbjct: 12 KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIK------AQIWD 65 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPD-AK 120 G +E Y + V LI V+D+ + ++ + L +LR+ + D Sbjct: 66 TAG----LERYRAITSAYYRGAVGALI-VYDISKSSSYENCNHW---LTELRENADDNVA 117 Query: 121 IFVLLHKMDLVQLDK--REELFQIMMKN---LSETSSEFGFPNLIGFPTSIWDESLYKAW 175 + ++ +K DL L +E M+N +ETS ++ +++ KA+ Sbjct: 118 VGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETS-------------ALNSDNVDKAF 164 Query: 176 SQIVCSLIPNMSNHQSNL 193 +++ ++ +S HQ +L Sbjct: 165 RELIVAIFQMVSKHQVDL 182 >2F3T-A nrPDB Length = 207 Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust. Identities = 34/158 (21%), Positives = 71/158 (44%), Gaps = 33/158 (20%) Query: 15 SGSGKSSMRSIIFSNYSAFDTR-------RLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 SG+GKSS+ + +DT+ R +V H F+ + + +D Sbjct: 13 SGAGKSSLIQALLKTQPLYDTQVSVSHTTRQPRPGEVHGEHYFFVNHDEFK--EMISRDA 70 Query: 68 FME------NYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK- 120 F+E NY+ ++ I Q++ + VF ++I + +Q+R+ P A+ Sbjct: 71 FLEHAEVFGNYYGTSREAIEQVLATGVDVF----------LDIDWQGAQQIRQKMPHARS 120 Query: 121 IFVLLHKMDLVQLDKR-----EELFQIMMKNLSETSSE 153 IF+L ++LD+R ++ +++ K +++ +E Sbjct: 121 IFIL--PPSKIELDRRLRGRGQDSEEVIAKRMAQAVAE 156 >1D5C-A nrPDB Length = 162 Score = 28.5 bits (62), Expect = 4.1, Method: Compositional matrix adjust. Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEH-SHLRFL--GNMTLNLWDCGG 64 KL+ +G GK+S+ I Y FD +TI ++ S +L G + L LWD G Sbjct: 3 KLVFLGEQAVGKTSI--ITRFMYDTFDNN-YQSTIGIDFLSKTLYLDEGPVRLQLWDTAG 59 Query: 65 QDVF 68 Q+ F Sbjct: 60 QERF 63 >4MRS-A nrPDB Length = 614 Score = 28.5 bits (62), Expect = 4.2, Method: Compositional matrix adjust. Identities = 12/39 (30%), Positives = 24/39 (61%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEH 46 ++ ++G SG+GKS++ ++F Y ++ R L D+ H Sbjct: 389 RVAIVGPSGAGKSTIARLLFRFYDPWEGRILIDGQDIAH 427 >4ZI3-A nrPDB Length = 190 Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust. Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 10/85 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++LL+G +GK+++ + S + T G I S LN+WD GGQ Sbjct: 19 RILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQ-----GFKLNVWDIGGQRK 73 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFD 92 + + F+ +LI+V D Sbjct: 74 IRPYWRS-----YFENTDILIYVID 93 >4YLG-A nrPDB Length = 173 Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust. Identities = 21/86 (24%), Positives = 39/86 (45%), Gaps = 12/86 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATID-VEHSHLRFLGNMTLNLWDCGGQD 66 ++L++G +GK+S+ + +G ++ VE+ ++ F +WD GGQD Sbjct: 15 RILMVGLDAAGKTSILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVWDVGGQD 68 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFD 92 + H +Q Q +I V D Sbjct: 69 KIRPLW-----RHYYQNTQAIIFVVD 89 >5UF8-A nrPDB Length = 181 Score = 28.1 bits (61), Expect = 5.2, Method: Compositional matrix adjust. Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 23/134 (17%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATID-VEHSHLRFLGNMTLNLWD 61 N ++L++G +GK+++ + +G ++ VE+ ++ F +WD Sbjct: 14 GNKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISF------TVWD 67 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY-----S 116 GGQD + + FQ Q +I V D D + A+A ++L++ Sbjct: 68 VGGQDKIRPLW-----RYYFQNTQGIIFVVDS------NDRDRIAEAREELQQMLNEDEL 116 Query: 117 PDAKIFVLLHKMDL 130 DA + V +K DL Sbjct: 117 RDALLLVFANKQDL 130 >5LPN-A nrPDB Length = 177 Score = 28.1 bits (61), Expect = 5.4, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGA-TIDVEHSHLRFLG-NMTLNLWDCGGQ 65 KLLL+G SG GK+ + FS+ AF+T + ID + + G + L +WD GQ Sbjct: 13 KLLLIGDSGVGKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 70 Query: 66 DVF 68 + F Sbjct: 71 ERF 73 >5SZJ-A nrPDB Length = 202 Score = 27.7 bits (60), Expect = 7.0, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGA-TIDVEHSHLRFLG-NMTLNLWDCGGQ 65 KLLL+G SG GK+ + FS+ AF+T + ID + + G + L +WD GQ Sbjct: 13 KLLLIGDSGVGKTCVL-FRFSD-DAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 70 Query: 66 DVF 68 + F Sbjct: 71 ERF 73 >3LRP-A nrPDB Length = 181 Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust. Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 21/128 (16%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + +G +VE R N++ +WD GGQD Sbjct: 19 RILMVGLDAAGKTTILYKVKLGEVVTTIPTIG--FNVETVEFR---NISFTVWDVGGQDK 73 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYS-----PDAKIF 122 + H + LI V D E + D A ++L + DA I Sbjct: 74 IRPLW-----RHYYSNTDGLIFVVDSNDRERIDD------AREELHRMINEEELKDAIIL 122 Query: 123 VLLHKMDL 130 V +K DL Sbjct: 123 VFANKQDL 130 >6IF2-B nrPDB Length = 186 Score = 27.3 bits (59), Expect = 9.1, Method: Compositional matrix adjust. Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 7/105 (6%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDCGGQD 66 KLL++G SG GKSS+ + F++ + + +D + + G + L +WD G Sbjct: 16 KLLIIGDSGVGKSSLL-LRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG-- 72 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQ 111 +E + T + ++ +I V+DV S E +++ + + Q Sbjct: 73 --LERFRTITSTY-YRGTHGVIVVYDVTSAESFVNVKRWLHEINQ 114 >6CEP-A nrPDB Length = 334 Score = 27.3 bits (59), Expect = 9.5, Method: Compositional matrix adjust. Identities = 11/34 (32%), Positives = 22/34 (64%) Query: 98 VLKDIEIFAKALKQLRKYSPDAKIFVLLHKMDLV 131 V +++ +F + Q+ KYSPD I V+ + +D++ Sbjct: 111 VQRNVNVFKFIIPQIVKYSPDCIIIVVSNPVDIL 144 >2H16-A nrPDB Length = 183 Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust. Identities = 31/143 (21%), Positives = 65/143 (45%), Gaps = 13/143 (9%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATID-VEHSHLRFLGNMTLNLW 60 S+ K++++G +GK+++ N + +G+ ++ + ++ RFL +W Sbjct: 18 GSHQEHKVIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFL------MW 71 Query: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 D GGQ+ ++ T + F V V++ D E V ++ A + LRK A Sbjct: 72 DIGGQESLRSSWNTYYTNTEF--VIVVVDSTDRERISVTREELYKMLAHEDLRK----AG 125 Query: 121 IFVLLHKMDLVQLDKREELFQIM 143 + + +K D+ + E+ Q + Sbjct: 126 LLIFANKQDVKECMTVAEISQFL 148 >2OCY-C nrPDB Length = 170 Score = 26.9 bits (58), Expect = 9.8, Method: Compositional matrix adjust. Identities = 35/160 (21%), Positives = 66/160 (41%), Gaps = 34/160 (21%) Query: 8 KLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLG-----ATIDVEHSHLRFLGNMTLNLWD 61 K+LL+G SG GKS + + ++ +G T+D+ ++ L LWD Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVK------LQLWD 58 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GQ+ F ++ +I V+DV +I+ + K + + + +A++ Sbjct: 59 TAGQE-----RFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQL 111 Query: 122 FVLLHKMDL----VQLDKREELFQIMMKNLSETSSEFGFP 157 ++ +K D+ V D+ E L + E G P Sbjct: 112 LLVGNKSDMETRVVTADQGEAL-----------AKELGIP 140 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4ARZ-A nrPDB 432 e-121 6CES-A nrPDB 414 e-116 6CES-C nrPDB 278 2e-75 3LLU-A nrPDB 252 1e-67 2Q3F-A nrPDB 251 3e-67 3R7W-B nrPDB 227 4e-60 6EHR-F nrPDB 167 5e-42 Sequences not found previously or not previously below threshold: 3O47-A nrPDB 47 7e-06 6FAE-B nrPDB 47 1e-05 5DE3-A nrPDB 47 1e-05 2B6H-A nrPDB 47 1e-05 2AL7-A nrPDB 46 2e-05 1Z6X-A nrPDB 46 2e-05 3LVQ-E nrPDB 46 2e-05 3LRP-A nrPDB 45 3e-05 6DFF-C nrPDB 45 4e-05 1MOZ-A nrPDB 45 4e-05 4ZI3-A nrPDB 45 5e-05 4YLG-A nrPDB 45 5e-05 2A5F-A nrPDB 44 7e-05 3AQ4-A nrPDB 44 7e-05 3BH6-A nrPDB 44 1e-04 1J2J-A nrPDB 44 1e-04 5NZV-F nrPDB 44 1e-04 5UF8-A nrPDB 43 2e-04 1KSG-A nrPDB 43 2e-04 4ILE-A nrPDB 42 2e-04 1EK0-A nrPDB 42 2e-04 2X77-A nrPDB 42 3e-04 5XC3-A nrPDB 42 3e-04 2FV8-A nrPDB 41 5e-04 6O62-A nrPDB 41 8e-04 5EE5-B nrPDB 40 0.001 6BBQ-A nrPDB 40 0.001 1Z22-A nrPDB 40 0.001 2H16-A nrPDB 40 0.002 5C1S-A nrPDB 39 0.002 2OCB-A nrPDB 39 0.003 3CPH-A nrPDB 39 0.004 1YZG-A nrPDB 38 0.005 2OCY-C nrPDB 37 0.008 5LAD-A nrPDB 37 0.011 5JCP-B nrPDB 37 0.012 2O52-A nrPDB 37 0.015 6G79-A nrPDB 36 0.016 5SZJ-A nrPDB 36 0.017 1X3S-A nrPDB 36 0.017 5ZHX-e nrPDB 36 0.018 5C2K-A nrPDB 36 0.018 2IL1-A nrPDB 36 0.021 3CUE-F nrPDB 36 0.022 5UWI-A nrPDB 36 0.023 5CLL-A nrPDB 36 0.023 2N1B-A nrPDB 36 0.023 2J1L-A nrPDB 36 0.026 2BMD-A nrPDB 35 0.028 4G01-B nrPDB 35 0.033 5LDD-C nrPDB 35 0.039 2RHD-A nrPDB 35 0.040 3E5H-A nrPDB 35 0.050 2REX-B nrPDB 34 0.066 3L0I-B nrPDB 34 0.085 2WWX-A nrPDB 34 0.088 1YZN-A nrPDB 34 0.089 2EW1-A nrPDB 34 0.091 5SZH-B nrPDB 34 0.091 5LPN-A nrPDB 34 0.11 1WMS-A nrPDB 34 0.11 6GDG-D nrPDB 34 0.13 1YVD-A nrPDB 33 0.13 2F7S-A nrPDB 33 0.16 2H57-A nrPDB 33 0.19 4FMC-F nrPDB 33 0.19 2NTY-C nrPDB 32 0.34 3RAB-A nrPDB 32 0.46 2J0V-A nrPDB 31 0.64 4LHX-A nrPDB 31 0.65 5YOZ-A nrPDB 31 0.69 1D5C-A nrPDB 31 0.69 2G77-B nrPDB 31 0.76 5SZI-A nrPDB 31 0.77 2A5J-A nrPDB 31 0.78 4MYH-A nrPDB 31 0.79 2G6B-A nrPDB 30 0.86 6IAE-A nrPDB 30 1.1 1Z06-A nrPDB 30 1.1 3DPU-A nrPDB 30 1.1 1GPM-A nrPDB 30 1.3 2WBL-C nrPDB 30 1.3 5YMX-A nrPDB 30 1.4 5CM8-B nrPDB 30 1.5 2G3Y-A nrPDB 30 1.5 5J8B-z nrPDB 30 1.7 5IMR-C nrPDB 30 1.7 2CJW-A nrPDB 30 1.8 3BWD-D nrPDB 29 2.0 6FF8-A nrPDB 29 2.1 1Z0F-A nrPDB 29 2.1 3A58-B nrPDB 29 2.2 3QB7-A nrPDB 29 2.2 1Z0A-A nrPDB 29 2.5 1Y63-A nrPDB 29 2.9 6HLU-A nrPDB 29 2.9 4QXA-A nrPDB 29 2.9 1YZU-A nrPDB 29 3.1 5ZVP-A nrPDB 29 3.2 4WNR-A nrPDB 29 3.2 1BBN-A nrPDB 29 3.2 2GTH-A nrPDB 29 4.1 4CZ2-A nrPDB 28 4.5 2TMK-A nrPDB 28 4.6 5GIE-A nrPDB 28 4.7 3TSO-A nrPDB 28 4.8 1RJK-A nrPDB 28 5.2 2FFQ-A nrPDB 28 6.8 2FNA-A nrPDB 28 7.2 2XTP-A nrPDB 27 8.7 6BWF-A nrPDB 27 9.1 3VX4-A nrPDB 27 9.1 >4ARZ-A nrPDB Length = 310 Score = 432 bits (1110), Expect = e-121, Method: Composition-based stats. Identities = 310/310 (100%), Positives = 310/310 (100%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW Sbjct: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 Query: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK Sbjct: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 Query: 121 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVC 180 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVC Sbjct: 121 IFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVC 180 Query: 181 SLIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDP 240 SLIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDP Sbjct: 181 SLIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDP 240 Query: 241 KRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSNMVCFIVLKDMNIPQELVLE 300 KRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSNMVCFIVLKDMNIPQELVLE Sbjct: 241 KRFEKISNIMKNFKQSCTKLKSGFKTLILNNNIYVSELSSNMVCFIVLKDMNIPQELVLE 300 Query: 301 NIKKAKEFFQ 310 NIKKAKEFFQ Sbjct: 301 NIKKAKEFFQ 310 >6CES-A nrPDB Length = 313 Score = 414 bits (1063), Expect = e-116, Method: Composition-based stats. Identities = 159/312 (50%), Positives = 214/312 (68%), Gaps = 19/312 (6%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 ++ +KK+LLMG+SGSGK+SMRSIIF+NY A DTRRLGATIDVEHSH+RFLGN+ LNLWD Sbjct: 3 NTAMKKKVLLMGKSGSGKTSMRSIIFANYIARDTRRLGATIDVEHSHVRFLGNLVLNLWD 62 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 CGGQD FMENYFT Q+D+IF+ V+VLI+VFDVES E+ KD+ + L+ + + SPDAKI Sbjct: 63 CGGQDTFMENYFTSQRDNIFRNVEVLIYVFDVESRELEKDMHYYQSCLEAILQNSPDAKI 122 Query: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVCS 181 F L+HKMDLVQ D+R+ +F+ ++L S F TSIWDE+LYKAWS IV Sbjct: 123 FCLVHKMDLVQEDQRDLIFKEREEDLRRLSRPL---ECACFRTSIWDETLYKAWSSIVYQ 179 Query: 182 LIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDPK 241 LIPN+ + NL+ F +I+ A E++LFER TFLVI + + H Sbjct: 180 LIPNVQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVH------------- 226 Query: 242 RFEKISNIMKNFKQSCTKLKSGFKTLILNNN---IYVSELSSNMVCFIVLKDMNIPQELV 298 RFEKISNI+K FK SC+KL + F+++ + N+ ++ +SN +V+ D +IP Sbjct: 227 RFEKISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAAT 286 Query: 299 LENIKKAKEFFQ 310 L NI+ A++ F+ Sbjct: 287 LINIRNARKHFE 298 >6CES-C nrPDB Length = 399 Score = 278 bits (711), Expect = 2e-75, Method: Composition-based stats. Identities = 52/217 (23%), Positives = 108/217 (49%), Gaps = 5/217 (2%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 +++ ++LLMG SGK+S++ ++F S +T L +T + + + +WD Sbjct: 59 SSKPRILLMGLRRSGKNSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFP 118 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 GQ F + F + IF+ LI+V D + + ++ + + + K +PD V Sbjct: 119 GQMDFFDPTFDYEM--IFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEV 175 Query: 124 LLHKMDLVQLDKREELFQIMMKNLSETSSEFGFP--NLIGFPTSIWDESLYKAWSQIVCS 181 +HK+D + D + E + + + ++ ++ G +L + TSI+D S+++A+S++V Sbjct: 176 FIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQK 235 Query: 182 LIPNMSNHQSNLKKFKEIMNALEIILFERTTFLVICS 218 LIP + ++ L F + LF+ + + I + Sbjct: 236 LIPQLPTLENLLNIFISNSGIEKAFLFDVVSKIYIAT 272 >3LLU-A nrPDB Length = 196 Score = 252 bits (644), Expect = 1e-67, Method: Composition-based stats. Identities = 47/182 (25%), Positives = 93/182 (51%), Gaps = 5/182 (2%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 ++ ++LLMG SGKSS++ ++F S +T L +T + + + +WD Sbjct: 18 GSKPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKIYKDDISNSSFVNFQIWDFP 77 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 GQ F + F + IF+ LI+V D + + ++ + + + K +PD V Sbjct: 78 GQMDFFDPTFDYEM--IFRGTGALIYVIDAQD-DYMEALTRLHITVSKAYKVNPDMNFEV 134 Query: 124 LLHKMDLVQLDKREELFQIMMKNLSETSSEFGFP--NLIGFPTSIWDESLYKAWSQIVCS 181 +HK+D + D + E + + + ++ ++ G +L + TSI+D S+++A+S++V Sbjct: 135 FIHKVDGLSDDHKIETQRDIHQRANDDLADAGLEKLHLSFYLTSIYDHSIFEAFSKVVQK 194 Query: 182 LI 183 LI Sbjct: 195 LI 196 >2Q3F-A nrPDB Length = 181 Score = 251 bits (640), Expect = 3e-67, Method: Composition-based stats. Identities = 47/181 (25%), Positives = 91/181 (50%), Gaps = 5/181 (2%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQ 65 + ++LLMG SGKSS++ ++F S +T L +T + + + +WD GQ Sbjct: 4 KPRILLMGLRRSGKSSIQKVVFHKMSPNETLFLESTNKICREDVSNSSFVNFQIWDFPGQ 63 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 F + F + IF+ LI V D + + ++ + + + K + D V + Sbjct: 64 IDFFDPTFDYEM--IFRGTGALIFVIDSQD-DYMEALARLHLTVTRAYKVNTDINFEVFI 120 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFP--NLIGFPTSIWDESLYKAWSQIVCSLI 183 HK+D + D + E + + + ++ ++ G +L + TSI+D S+++A+S++V LI Sbjct: 121 HKVDGLSDDHKIETQRDIHQRANDDLADAGLEKIHLSFYLTSIYDHSIFEAFSKVVQKLI 180 Query: 184 P 184 P Sbjct: 181 P 181 >3R7W-B nrPDB Length = 331 Score = 227 bits (579), Expect = 4e-60, Method: Composition-based stats. Identities = 58/212 (27%), Positives = 105/212 (49%), Gaps = 7/212 (3%) Query: 9 LLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDVF 68 +LLMG GKSS+ ++F N DT L +T + H L + L + + GQ + Sbjct: 2 VLLMGVRRCGKSSICKVVFHNMQPLDTLYLESTSNPSLEHFSTL--IDLAVMELPGQLNY 59 Query: 69 MENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHKM 128 E + ++ +F+ V L++V D + E + I A ++ K +P I VL+HK+ Sbjct: 60 FEPSYDSER--LFKSVGALVYVIDSQD-EYINAITNLAMIIEYAYKVNPSINIEVLIHKV 116 Query: 129 DLVQLDKREELFQIMMKNLSETSSEFGFPN--LIGFPTSIWDESLYKAWSQIVCSLIPNM 186 D + D + + + +M+ E E G + + TSI+D S+Y+A+S+IV LIP + Sbjct: 117 DGLSEDFKVDAQRDIMQRTGEELLELGLDGVQVSFYLTSIFDHSIYEAFSRIVQKLIPEL 176 Query: 187 SNHQSNLKKFKEIMNALEIILFERTTFLVICS 218 S ++ L + + LF+ + + + + Sbjct: 177 SFLENMLDNLIQHSKIEKAFLFDVNSKIYVST 208 >6EHR-F nrPDB Length = 132 Score = 167 bits (423), Expect = 5e-42, Method: Composition-based stats. Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 16/129 (12%) Query: 185 NMSNHQSNLKKFKEIMNALEIILFERTTFLVICSSNGENSNENHDSSDNNNVLLDPKRFE 244 N+ + NL+ F +I+ A E++LFER TFLVI + + H RFE Sbjct: 2 NVQQLEMNLRNFAQIIEADEVLLFERATFLVISHYQCKEQRDVH-------------RFE 48 Query: 245 KISNIMKNFKQSCTKLKSGFKTLILNNN---IYVSELSSNMVCFIVLKDMNIPQELVLEN 301 KISNI+K FK SC+KL + F+++ + N+ ++ +SN +V+ D +IP L N Sbjct: 49 KISNIIKQFKLSCSKLAASFQSMEVRNSNFAAFIDIFTSNTYVMVVMSDPSIPSAATLIN 108 Query: 302 IKKAKEFFQ 310 I+ A++ F+ Sbjct: 109 IRNARKHFE 117 >3O47-A nrPDB Length = 329 Score = 47.4 bits (111), Expect = 7e-06, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 15/125 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + + N++ +WD GGQD Sbjct: 167 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVGGQDK 221 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLK--DIEIFAKALKQLRKYSPDAKIFVLL 125 H FQ Q LI V D E + E+ + + DA + V Sbjct: 222 I-----RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR---DAVLLVFA 273 Query: 126 HKMDL 130 +K DL Sbjct: 274 NKQDL 278 >6FAE-B nrPDB Length = 213 Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 15/125 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + + N++ +WD GGQD Sbjct: 51 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVGGQDK 105 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLK--DIEIFAKALKQLRKYSPDAKIFVLL 125 H FQ Q LI V D E + E+ + + DA + V Sbjct: 106 I-----RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR---DAVLLVFA 157 Query: 126 HKMDL 130 +K DL Sbjct: 158 NKQDL 162 >5DE3-A nrPDB Length = 169 Score = 47.0 bits (110), Expect = 1e-05, Method: Composition-based stats. Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 17/127 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + S D + T L G L +WD GGQ Sbjct: 2 RILVLGLDNAGKTTILKAL----SEEDITTITPTQGFNIKSLSRDGF-NLKIWDIGGQKS 56 Query: 68 ---FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 + NYF + LI+V D ++ L + E L Q K + V Sbjct: 57 IRPYWRNYFDQ--------TDALIYVIDSADSKRLSESEFELTELLQEEKM-TGVPLLVF 107 Query: 125 LHKMDLV 131 +K DLV Sbjct: 108 ANKQDLV 114 >2B6H-A nrPDB Length = 192 Score = 46.6 bits (109), Expect = 1e-05, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 15/125 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + + N+ +WD GGQD Sbjct: 31 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNICFTVWDVGGQDK 85 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSP--DAKIFVLL 125 H FQ Q LI V D E ++ A L+++ + DA + V Sbjct: 86 I-----RPLWRHYFQNTQGLIFVVDSNDRE---RVQESADELQKMLQEDELRDAVLLVFA 137 Query: 126 HKMDL 130 +K D+ Sbjct: 138 NKQDM 142 >2AL7-A nrPDB Length = 186 Score = 46.3 bits (108), Expect = 2e-05, Method: Composition-based stats. Identities = 23/99 (23%), Positives = 43/99 (43%), Gaps = 9/99 (9%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 S +L L+G SGK++ ++I S + D T+ + GN+T+ +WD Sbjct: 19 SKEEMELTLVGLQYSGKTTFVNVIASGQFSEDMI---PTVGFNMRKV-TKGNVTIKIWDI 74 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKD 101 GGQ F + + V ++++ D E ++ Sbjct: 75 GGQ-----PRFRSMWERYCRGVNAIVYMIDAADREKIEA 108 >1Z6X-A nrPDB Length = 180 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 50/125 (40%), Gaps = 15/125 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + + N+ +WD GGQD Sbjct: 19 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNICFTVWDVGGQDR 73 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSP--DAKIFVLL 125 H FQ Q LI V D E I+ A L+++ DA + + Sbjct: 74 I-----RPLWKHYFQNTQGLIFVVDSNDRE---RIQEVADELQKMLLVDELRDAVLLLFA 125 Query: 126 HKMDL 130 +K DL Sbjct: 126 NKQDL 130 >3LVQ-E nrPDB Length = 497 Score = 45.9 bits (107), Expect = 2e-05, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 56/142 (39%), Gaps = 13/142 (9%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 SN ++L++G +GK+++ + T+ + + N+ N+WD Sbjct: 319 SNKEMRILMLGLDAAGKTTI----LYKLKLGQSVTTIPTVGFNVETVTY-KNVKFNVWDV 373 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVL-KDIEIFAKALKQLRKYSPDAKI 121 GGQD H + Q LI V D + + + + + + + DA I Sbjct: 374 GGQDKI-----RPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND--REMRDAII 426 Query: 122 FVLLHKMDLVQLDKREELFQIM 143 + +K DL K E+ + + Sbjct: 427 LIFANKQDLPDAMKPHEIQEKL 448 >3LRP-A nrPDB Length = 181 Score = 45.5 bits (106), Expect = 3e-05, Method: Composition-based stats. Identities = 32/145 (22%), Positives = 54/145 (37%), Gaps = 15/145 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + F N++ +WD GGQD Sbjct: 19 RILMVGLDAAGKTTI----LYKVKLGEVVTTIPTIGFNVETVEF-RNISFTVWDVGGQDK 73 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDI--EIFAKALKQLRKYSPDAKIFVLL 125 H + LI V D E + D E+ ++ K DA I V Sbjct: 74 I-----RPLWRHYYSNTDGLIFVVDSNDRERIDDAREELHRMINEEELK---DAIILVFA 125 Query: 126 HKMDLVQLDKREELFQIMMKNLSET 150 +K DL E+ + + N Sbjct: 126 NKQDLPNAMSAAEVTEKLHLNTIRE 150 >6DFF-C nrPDB Length = 193 Score = 45.1 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 49/129 (37%), Gaps = 15/129 (11%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 + ++L++G +GK+++ + TI + + N++ +WD G Sbjct: 27 GSEMRILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVG 81 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLK--DIEIFAKALKQLRKYSPDAKI 121 G D H FQ Q LI V D E + E+ + + DA + Sbjct: 82 GLDKI-----RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR---DAVL 133 Query: 122 FVLLHKMDL 130 V +K DL Sbjct: 134 LVFANKQDL 142 >1MOZ-A nrPDB Length = 183 Score = 45.1 bits (105), Expect = 4e-05, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 11/127 (8%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 SN ++L++G G+GK++ I + TI L + N+ LN+WD Sbjct: 15 SNKELRILILGLDGAGKTT----ILYRLQIGEVVTTKPTIGFNVETLSY-KNLKLNVWDL 69 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIF 122 GGQ + Y+ + +I V D + + + Q + DA + Sbjct: 70 GGQ-TSIRPYW----RCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQ-DAALL 123 Query: 123 VLLHKMD 129 V +K D Sbjct: 124 VFANKQD 130 >4ZI3-A nrPDB Length = 190 Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 10/90 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++LL+G +GK+++ ++ D + T ++ G LN+WD GGQ Sbjct: 19 RILLLGLDNAGKTTLLK----QLASEDISHITPTQGFNIKSVQSQGF-KLNVWDIGGQRK 73 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 + Y+ F+ +LI+V D + Sbjct: 74 -IRPYWRS----YFENTDILIYVIDSADRK 98 >4YLG-A nrPDB Length = 173 Score = 44.7 bits (104), Expect = 5e-05, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 10/90 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+S+ + TI + + N++ +WD GGQD Sbjct: 15 RILMVGLDAAGKTSI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVGGQDK 69 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 H +Q Q +I V D + Sbjct: 70 I-----RPLWRHYYQNTQAIIFVVDSNDRD 94 >2A5F-A nrPDB Length = 175 Score = 44.3 bits (103), Expect = 7e-05, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 55/141 (39%), Gaps = 13/141 (9%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 N ++L++G +GK+++ + T+ + + N+ N+WD G Sbjct: 11 NKEMRILMLGLDAAGKTTI----LYKLKLGQSVTTIPTVGFNVETVTY-KNVKFNVWDVG 65 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVL-KDIEIFAKALKQLRKYSPDAKIF 122 GQD H + Q LI V D + + + + + + + DA I Sbjct: 66 GQDKI-----RPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND--REMRDAIIL 118 Query: 123 VLLHKMDLVQLDKREELFQIM 143 + +K DL K E+ + + Sbjct: 119 IFANKQDLPDAMKPHEIQEKL 139 >3AQ4-A nrPDB Length = 184 Score = 44.3 bits (103), Expect = 7e-05, Method: Composition-based stats. Identities = 29/125 (23%), Positives = 49/125 (39%), Gaps = 15/125 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + + N++ +WD GGQD Sbjct: 22 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVGGQDK 76 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTE--VLKDIEIFAKALKQLRKYSPDAKIFVLL 125 H FQ Q LI V D + V E+ + + DA + V Sbjct: 77 I-----RPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR---DAVLLVFA 128 Query: 126 HKMDL 130 +K DL Sbjct: 129 NKQDL 133 >3BH6-A nrPDB Length = 164 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 10/94 (10%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 + ++LL+G +GK+++ ++ D + T ++ G LN+WD G Sbjct: 2 GSEVRILLLGLDNAGKTTLLK----QLASEDISHITPTQGFNIKSVQSQGF-KLNVWDIG 56 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 G + Y+ F+ +LI+V D + Sbjct: 57 G-LRKIRPYWRS----YFENTDILIYVIDSADRK 85 >1J2J-A nrPDB Length = 166 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 48/125 (38%), Gaps = 15/125 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G +GK+++ + TI + + N++ +WD GG D Sbjct: 4 RILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVGGLDK 58 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLK--DIEIFAKALKQLRKYSPDAKIFVLL 125 H FQ Q LI V D E + E+ + + DA + V Sbjct: 59 I-----RPLWRHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAEDELR---DAVLLVFA 110 Query: 126 HKMDL 130 +K DL Sbjct: 111 NKQDL 115 >5NZV-F nrPDB Length = 181 Score = 43.6 bits (101), Expect = 1e-04, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 38/93 (40%), Gaps = 10/93 (10%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 N ++L++G G+GK++ + + TI +++ N++ +WD G Sbjct: 15 NKEMRILMVGLDGAGKTT----VLYKLKLGEVITTIPTIGFNVETVQY-KNISFTVWDVG 69 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVEST 96 GQD H ++ + +I V D Sbjct: 70 GQDRI-----RSLWRHYYRNTEGVIFVVDSNDR 97 >5UF8-A nrPDB Length = 181 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 15/129 (11%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 N ++L++G +GK+++ + TI + + N++ +WD G Sbjct: 15 NKEMRILMVGLDAAGKTTI----LYKLKLGEIVTTIPTIGFNVETVEY-KNISFTVWDVG 69 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTE--VLKDIEIFAKALKQLRKYSPDAKI 121 GQD + FQ Q +I V D + E+ + + DA + Sbjct: 70 GQDKI-----RPLWRYYFQNTQGIIFVVDSNDRDRIAEAREELQQMLNEDELR---DALL 121 Query: 122 FVLLHKMDL 130 V +K DL Sbjct: 122 LVFANKQDL 130 >1KSG-A nrPDB Length = 186 Score = 42.8 bits (99), Expect = 2e-04, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 19/162 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 +LL++G +GK+++ ++ D + T+ L G LN+WD GGQ Sbjct: 20 RLLMLGLDNAGKTTILK----KFNGEDVDTISPTLGFNIKTLEHRGF-KLNIWDVGGQKS 74 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHK 127 + F+ LI V D + ++D + ++L + + A + + +K Sbjct: 75 LRSYWRNY-----FESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLA-GATLLIFANK 128 Query: 128 MDL--------VQLDKREELFQIMMKNLSETSSEFGFPNLIG 161 DL +Q + + + S+ G L G Sbjct: 129 QDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPG 170 >4ILE-A nrPDB Length = 184 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 9/94 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 +L L+G SGK++ ++I S D T+ + GN+T+ LWD GGQ Sbjct: 24 ELTLVGLQYSGKTTFVNVIASGQFNEDMI---PTVGFNMRKI-TKGNVTIKLWDIGGQ-- 77 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKD 101 F + + V ++++ D E ++ Sbjct: 78 ---PRFRSMWERYCRGVSAIVYMVDAADQEKIEA 108 >1EK0-A nrPDB Length = 170 Score = 42.4 bits (98), Expect = 2e-04, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 68/160 (42%), Gaps = 17/160 (10%) Query: 8 KLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 KL+L+G + GKSS+ + ++++ +GA + + + +WD GQ+ Sbjct: 5 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTI-NEHTVKFEIWDTAGQE 63 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDV-ESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 F ++ Q + V+DV + +K + +Q K D I ++ Sbjct: 64 R-----FASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASK---DIIIALVG 115 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS 165 +K+D++Q ++ + + L+E L+ F TS Sbjct: 116 NKIDMLQEGGERKVAREEGEKLAEE------KGLLFFETS 149 >2X77-A nrPDB Length = 189 Score = 42.4 bits (98), Expect = 3e-04, Method: Composition-based stats. Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 10/99 (10%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 + ++ + ++L++G +GK+S+ D T+ V L++ N++ +W Sbjct: 17 LPADRKIRVLMLGLDNAGKTSI----LYRLHLGDVVTTVPTVGVNLETLQY-KNISFEVW 71 Query: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVL 99 D GGQ + Y+ F +I+V D + + Sbjct: 72 DLGGQ-TGVRPYW----RCYFSDTDAVIYVVDSTDRDRM 105 >5XC3-A nrPDB Length = 176 Score = 42.0 bits (97), Expect = 3e-04, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 76/180 (42%), Gaps = 15/180 (8%) Query: 4 NNRKKLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 NN K++L+G SG GKSS+ +F+ + + +GA + + + LN+WD Sbjct: 3 NNGYKIILIGSSGVGKSSIVHQFLFNRKISNVSPTIGAAFASKQVIAKNGKTLKLNIWDT 62 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIF 122 GQ+ F + + L+ VFDV E D+ + L+ I Sbjct: 63 AGQERFRSITKMYYTNSL----GCLV-VFDVTDRESFDDVYYWINDLR--INCHTTYYIL 115 Query: 123 VLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVCSL 182 V+ +K+D+ + + R + K + ++ F +S +++ + +++ + Sbjct: 116 VVANKIDIDKNNWRV-SENEIKKFCRDNDCDY------VFASSFESDTVNNLFGKMIDKM 168 >2FV8-A nrPDB Length = 207 Score = 41.2 bits (95), Expect = 5e-04, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 69/147 (46%), Gaps = 11/147 (7%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGG 64 RKKL+++G GK+ + I+FS F + + + + G + L LWD G Sbjct: 25 RKKLVVVGDGACGKTCLL-IVFSK-DEFPEVYVPTVFENYVADIEVDGKQVELALWDTAG 82 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ + + + + V++ F V+S + L++I K + +++ + P+ I ++ Sbjct: 83 QED-----YDRLRPLSYPDTDVILMCFSVDSPDSLENIP--EKWVPEVKHFCPNVPIILV 135 Query: 125 LHKMDLVQLDK-REELFQIMMKNLSET 150 +K DL + R EL ++ + + Sbjct: 136 ANKKDLRSDEHVRTELARMKQEPVRTD 162 >6O62-A nrPDB Length = 184 Score = 40.9 bits (94), Expect = 8e-04, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 64/146 (43%), Gaps = 16/146 (10%) Query: 8 KLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 KLLL+G SG GKS + + ++ +G + + + L +WD GQ+ Sbjct: 16 KLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKI-RTIESKGKRIKLQVWDTAGQE 74 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F ++ ++ ++DV + +++E + + + Q + DA+IF++ + Sbjct: 75 RFRTITTAY-----YRGAMGIVLIYDVTDSRSFENVENWFQTVTQ--HANEDAQIFLVGN 127 Query: 127 KMDLVQLDKREELFQIMMKNLSETSS 152 K D +E+ + + K + + Sbjct: 128 KCD-------DEVNRQVSKEQGQELA 146 >5EE5-B nrPDB Length = 171 Score = 40.5 bits (93), Expect = 0.001, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 35/90 (38%), Gaps = 10/90 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 ++L++G G+GK+++ + TI + + N+ +WD GG Sbjct: 9 RILILGLDGAGKTTI----LYRLQVGEVVTTIPTIGFNVETVTY-KNLKFQVWDLGG-LT 62 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 + Y+ + +I+V D + Sbjct: 63 SIRPYW----RCYYSNTDAVIYVVDSCDRD 88 >6BBQ-A nrPDB Length = 520 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 13/141 (9%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 N ++L++G +GK++ I + T+ + + N+ N+WD G Sbjct: 357 NKEMRILMLGLDAAGKTT----ILYKLKLGQSVTTIPTVGFNVETVTY-KNVKFNVWDVG 411 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVL-KDIEIFAKALKQLRKYSPDAKIF 122 G D H + Q LI V D + + + + + + + DA I Sbjct: 412 GLDKI-----RPLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIIND--REMRDAIIL 464 Query: 123 VLLHKMDLVQLDKREELFQIM 143 + +K DL K E+ + + Sbjct: 465 IFANKQDLPDAMKPHEIQEKL 485 >1Z22-A nrPDB Length = 168 Score = 40.1 bits (92), Expect = 0.001, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 65/182 (35%), Gaps = 32/182 (17%) Query: 8 KLLLMGRSGSGKSSM----RSIIFSN--YSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 K++++G GKSSM IF+ L I V +R L LWD Sbjct: 7 KMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVR------LMLWD 60 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GQ+ F ++ Q + VF E + I + + + P A + Sbjct: 61 TAGQEE-----FDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVVAEVGDIPTALV 115 Query: 122 FVLLHKMDLVQLD-KREELFQIMMKNLSETSSEFGFPNLIGFPTSIW-DESLYKAWSQIV 179 +K+DL+ + E + + K L L + TS+ D ++ + + + Sbjct: 116 Q---NKIDLLDDSCIKNEEAEGLAKRLK----------LRFYRTSVKEDLNVSEVFKYLA 162 Query: 180 CS 181 Sbjct: 163 EK 164 >2H16-A nrPDB Length = 183 Score = 39.7 bits (91), Expect = 0.002, Method: Composition-based stats. Identities = 19/98 (19%), Positives = 40/98 (40%), Gaps = 10/98 (10%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 S+ K++++G +GK+++ +S + TI + + N +WD Sbjct: 19 SHQEHKVIIVGLDNAGKTTI----LYQFSMNEVVHTSPTIGSNVEEI-VINNTRFLMWDI 73 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLK 100 GGQ+ ++ T + + +I V D E + Sbjct: 74 GGQESLRSSWNTY-----YTNTEFVIVVVDSTDRERIS 106 >5C1S-A nrPDB Length = 391 Score = 39.3 bits (90), Expect = 0.002, Method: Composition-based stats. Identities = 27/173 (15%), Positives = 66/173 (38%), Gaps = 25/173 (14%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 +LL++G SG GK+++ F ++ + + +++ + +++ D GQ Sbjct: 64 RLLVVGSSGVGKTTLCDCFFESHQSQGEETREKHVQIDND------FIRISISDIAGQQS 117 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHK 127 F D+ + ++ ++D+ + D++ L + D +I ++ +K Sbjct: 118 F------YACDNPYDGYDAILVMYDITELKSFTDLKTMWLPDIFLY-CNIDTQIIIIGNK 170 Query: 128 MDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDES---LYKAWSQ 177 D Q R + + + + S D+S L+ S+ Sbjct: 171 KD--QEIDRIITRKEAEQFAQDRL-------CQFYEISTKDDSCQLLFDCISR 214 >2OCB-A nrPDB Length = 180 Score = 38.9 bits (89), Expect = 0.003, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 15/139 (10%) Query: 8 KLLLMGRSGSGKSS-MRSIIFSNY--SAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGG 64 K++L+G G GKSS M + + + AF T + RF +TL +WD G Sbjct: 9 KVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRF---VTLQIWDTAG 65 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAK-ALKQLRKYSPD-AKIF 122 Q+ F + ++ + F V+ + +++ + K + P+ Sbjct: 66 QER-----FKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFV 120 Query: 123 VLLHKMDLVQLDKREELFQ 141 VL +K+D + D++ + Sbjct: 121 VLGNKVD--KEDRQVTTEE 137 >3CPH-A nrPDB Length = 213 Score = 38.6 bits (88), Expect = 0.004, Method: Composition-based stats. Identities = 31/147 (21%), Positives = 65/147 (44%), Gaps = 13/147 (8%) Query: 2 SSNNRKKLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 S ++ K+LL+G SG GKS + + ++ +G ++ + + L LW Sbjct: 16 SYDSIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQLW 74 Query: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 D GQ+ F ++ +I V+DV +I+ + K + + + +A+ Sbjct: 75 DTAGQERFRTITTAY-----YRGAMGIILVYDVTDERTFTNIKQWFKTVNE--HANDEAQ 127 Query: 121 IFVLLHKMDL----VQLDKREELFQIM 143 + ++ +K D+ V D+ E L + + Sbjct: 128 LLLVGNKSDMETRVVTADQGEALAKEL 154 >1YZG-A nrPDB Length = 179 Score = 38.2 bits (87), Expect = 0.005, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 16/111 (14%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCG 63 N K++++G +GK+++ + + TI + + N +WD G Sbjct: 14 NQEHKVIIVGLDNAGKTTI----LYQFLMNEVVHTSPTIGSNVEEI-VVKNTHFLMWDIG 68 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRK 114 GQ+ ++ T + + +I V D E A ++L + Sbjct: 69 GQESLRSSWNTY-----YSNTEFIILVVDSIDRE------RLAITKEELYR 108 >2OCY-C nrPDB Length = 170 Score = 37.4 bits (85), Expect = 0.008, Method: Composition-based stats. Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 7/105 (6%) Query: 8 KLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 K+LL+G SG GKS + + ++ +G ++ + + L LWD GQ+ Sbjct: 5 KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDI-NGKKVKLQLWDTAGQE 63 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQ 111 F ++ +I V+DV +I+ + K + + Sbjct: 64 RFRTITTAY-----YRGAMGIILVYDVTDERTFTNIKQWFKTVNE 103 >5LAD-A nrPDB Length = 404 Score = 37.0 bits (84), Expect = 0.011, Method: Composition-based stats. Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 10/133 (7%) Query: 3 SNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDC 62 + R+ +++ GR GKSS + + + + G T D + + + L D Sbjct: 6 AGFRRYIVVAGRRNVGKSSFMNALVGQNVSIVSEYAGTTTDPVYKSMELYPVGPVTLVDT 65 Query: 63 GGQDVFME--NYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK 120 G D E ++ +F I V D E T D+ K ++ Sbjct: 66 PGLDDVGELGRLRVEKARRVFYRADCGILVTDSEPTPYEDDVVNLFKEME--------IP 117 Query: 121 IFVLLHKMDLVQL 133 V+++K+D++ Sbjct: 118 FVVVVNKIDVLGE 130 >5JCP-B nrPDB Length = 419 Score = 37.0 bits (84), Expect = 0.012, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 67/154 (43%), Gaps = 13/154 (8%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNL 59 +S+ RKKL+++G GK+ +I ++ F + + + + G + L L Sbjct: 238 LSAAIRKKLVIVGDGACGKT--CLLIVNSKDQFPEVYVPTVFENYVADIEVDGKQVELAL 295 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ+ + + + + V++ F ++S + L++I K +++ + P+ Sbjct: 296 WDTAGQED-----YDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNV 348 Query: 120 KIFVLLHKMDLVQLDKREELFQIMMKNLSETSSE 153 I ++ +K DL + + + K E Sbjct: 349 PIILVGNKKDLRNDEH---TRRELAKMKQEPVKP 379 >2O52-A nrPDB Length = 200 Score = 36.6 bits (83), Expect = 0.015, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 80/189 (42%), Gaps = 23/189 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEH-SHLRFLG--NMTLNLWDCGG 64 K L++G +G+GKS + N D+ TI VE S + +G + L +WD G Sbjct: 27 KFLVIGSAGTGKSCLLHQFIENKFKQDS---NHTIGVEFGSRVVNVGGKTVKLQIWDTAG 83 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ F + ++ + V+D+ S E + + + L SP+ + + Sbjct: 84 QERFRSVTRSY-----YRGAAGALLVYDITSRETYNSLAAWLTDARTL--ASPNIVVILC 136 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS-IWDESLYKAWSQIVCSLI 183 +K DL +RE F + E L+ TS + E++ +A+ + +++ Sbjct: 137 GNKKDL--DPEREVTFLEASRFAQEN-------ELMFLETSALTGENVEEAFLKCARTIL 187 Query: 184 PNMSNHQSN 192 + + + + Sbjct: 188 NKIDSGELD 196 >6G79-A nrPDB Length = 225 Score = 36.2 bits (82), Expect = 0.016, Method: Composition-based stats. Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 13/138 (9%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLW 60 +S+ KLLL+G SGKS++ + + G T + +H F N+ L+ Sbjct: 25 ISAAKDVKLLLLGADNSGKSTIVKQM--KIIHGGSGGSGGTTGIVETHFTF-KNLHFRLF 81 Query: 61 DCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQL--RKYSPD 118 D GGQ K+ H F+ V +I D+ + + K+ D Sbjct: 82 DVGGQRSE-----RKKWIHCFEDVTAIIFCVDLSDY---NRMHESLMLFDSICNNKFFID 133 Query: 119 AKIFVLLHKMDLVQLDKR 136 I + L+K DL + Sbjct: 134 TSIILFLNKKDLFGEKIK 151 >5SZJ-A nrPDB Length = 202 Score = 36.2 bits (82), Expect = 0.017, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 79/191 (41%), Gaps = 21/191 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGAT-IDVEHSHLRFLGN-MTLNLWDCGGQ 65 KLLL+G SG GK+ + + AF+T + ID + + G + L +WD GQ Sbjct: 13 KLLLIGDSGVGKT--CVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 70 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 + F + ++ ++ V+D+ + + ++I + + + + + D + +L Sbjct: 71 ERFHTITTSY-----YRGAMGIMLVYDITNGKSFENISKWLRNIDE--HANEDVERMLLG 123 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDE-SLYKAWSQIVCSLIP 184 +K D+ DKR + E + F TS ++ KA+ + ++ Sbjct: 124 NKCDM--DDKRVVPKGKGEQIARE-------HGIRFFETSAKANINIEKAFLTLAEDILR 174 Query: 185 NMSNHQSNLKK 195 + N + Sbjct: 175 KTPVKEPNSEN 185 >1X3S-A nrPDB Length = 195 Score = 36.2 bits (82), Expect = 0.017, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 7/117 (5%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDCGGQD 66 K+L++G SG GKSS+ + F++ + +D + + GN L +WD GQ+ Sbjct: 17 KILIIGESGVGKSSLL-LRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 F T ++ Q +I V+DV + ++ + L+ + + V Sbjct: 76 RF--RTLTPSY---YRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLV 127 >5ZHX-e nrPDB Length = 198 Score = 36.2 bits (82), Expect = 0.018, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 13/149 (8%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGG 64 RKKL+++G GK+ + I+FS F + + + + G + L LWD G Sbjct: 10 RKKLVIVGDGACGKTCLL-IVFSKDQ-FPEVYVPTVFENYVADIEVDGKQVELALWDTAG 67 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ + + + + V++ F ++S + L++I K +++ + P+ I ++ Sbjct: 68 QED-----YDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILV 120 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSE 153 +K DL + + + K E Sbjct: 121 GNKKDLRNDEH---TRRELAKMKQEPVKP 146 >5C2K-A nrPDB Length = 415 Score = 36.2 bits (82), Expect = 0.018, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 65/149 (43%), Gaps = 13/149 (8%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGG 64 RKKL+++G GK+ + I+FS F + + + + G + L LWD G Sbjct: 12 RKKLVIVGDGACGKTCLL-IVFSKDQ-FPEVYVPTVFENYVADIEVDGKQVELALWDTAG 69 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ + + + + V++ F ++S + L++I K +++ + P+ I ++ Sbjct: 70 QED-----YDRLRPLSYPDTDVILMCFSIDSPDSLENIP--EKWTPEVKHFCPNVPIILV 122 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSE 153 +K DL + + + K E Sbjct: 123 GNKKDLRNDEH---TRRELAKMKQEPVKP 148 >2IL1-A nrPDB Length = 192 Score = 35.9 bits (81), Expect = 0.021, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 65/149 (43%), Gaps = 16/149 (10%) Query: 6 RKKLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGG 64 + +++++G G GK+S M + +G ++ LR + L +WD G Sbjct: 26 KLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRG-KKIRLQIWDTAG 84 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ F N T ++ + +I V+D+ E D+ + K + + S DA++ ++ Sbjct: 85 QERF--NSITSAY---YRSAKGIILVYDITKKETFDDLPKWMKMIDKY--ASEDAELLLV 137 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSE 153 +K+D E + + + E ++ Sbjct: 138 GNKLD-------CETDREITRQQGEKFAQ 159 >3CUE-F nrPDB Length = 206 Score = 35.9 bits (81), Expect = 0.022, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 76/187 (40%), Gaps = 19/187 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRR-LGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 KLLL+G SG GKS + + D +G ++ L + L +WD GQ+ Sbjct: 10 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKT-VKLQIWDTAGQE 68 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F + ++ +I V+DV E ++++ + + + S K+ V Sbjct: 69 RFRTITSSY-----YRGSHGIIIVYDVTDQESFNGVKMWLQEIDR-YATSTVLKLLV--- 119 Query: 127 KMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDES-LYKAWSQIVCSLIPN 185 + D ++ +++ ++++ ++ + TS D + + A+ + + + Sbjct: 120 ---GNKCDLKD--KRVVEYDVAKEFADA--NKMPFLETSALDSTNVEDAFLTMARQIKES 172 Query: 186 MSNHQSN 192 MS N Sbjct: 173 MSQQNLN 179 >5UWI-A nrPDB Length = 237 Score = 35.9 bits (81), Expect = 0.023, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 16/142 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHL---RFLGNMTLNLWDCGG 64 KL+L+G G+GK++ F+ + + AT+ VE L G + N+WD G Sbjct: 33 KLVLVGDGGTGKTTFVKR--HLTGEFEKKYV-ATLGVEVHPLVFHTNRGPIKFNVWDTAG 89 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ F +D + Q I +FDV S K++ + + L ++ + P I + Sbjct: 90 QEK-----FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIP---IVLC 141 Query: 125 LHKMDLVQLDKREELFQIMMKN 146 +K+D+ D++ + I+ Sbjct: 142 GNKVDI--KDRKVKAKSIVFHR 161 >5CLL-A nrPDB Length = 191 Score = 35.9 bits (81), Expect = 0.023, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 16/142 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHL---RFLGNMTLNLWDCGG 64 KL+L+G G+GK++ F+ + + AT+ VE L G + N+WD G Sbjct: 12 KLVLVGDGGTGKTTFVKR--HLTGEFEKKYV-ATLGVEVHPLVFHTNRGPIKFNVWDTAG 68 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ F +D + Q I +FDV S K++ + + L ++ + P I + Sbjct: 69 QEK-----FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIP---IVLC 120 Query: 125 LHKMDLVQLDKREELFQIMMKN 146 +K+D+ D++ + I+ Sbjct: 121 GNKVDI--KDRKVKAKSIVFHR 140 >2N1B-A nrPDB Length = 261 Score = 35.9 bits (81), Expect = 0.023, Method: Composition-based stats. Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 16/142 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHL---RFLGNMTLNLWDCGG 64 KL+L+G G+GK++ F+ + + AT+ VE L G + N+WD G Sbjct: 53 KLVLVGDGGTGKTTFVKR--HLTGEFEKKYV-ATLGVEVHPLVFHTNRGPIKFNVWDTAG 109 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ F +D + Q I +FDV S K++ + + L ++ + P I + Sbjct: 110 QEK-----FGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIP---IVLC 161 Query: 125 LHKMDLVQLDKREELFQIMMKN 146 +K+D+ D++ + I+ Sbjct: 162 GNKVDI--KDRKVKAKSIVFHR 181 >2J1L-A nrPDB Length = 214 Score = 35.9 bits (81), Expect = 0.026, Method: Composition-based stats. Identities = 32/157 (20%), Positives = 65/157 (41%), Gaps = 21/157 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDCGGQD 66 K++L+G G GK+S+ ++F++ AF + +L+ G + L++WD GQD Sbjct: 36 KVVLVGDGGCGKTSLL-MVFAD-GAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQD 93 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 + + + + VL+ FDV S +I ++ P+ F Sbjct: 94 D-----YDRLRPLFYPDASVLLLCFDVTSPNSFDNIFN---------RWYPEVNHFC--K 137 Query: 127 KMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFP 163 K+ ++ + + +L + K+L G + Sbjct: 138 KVPIIVVGCKTDLRKD--KSLVNKLRRNGLEPVTYHR 172 >2BMD-A nrPDB Length = 186 Score = 35.5 bits (80), Expect = 0.028, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 23/189 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEH-SHLRFLG--NMTLNLWDCGG 64 K L++G +G+GKS + D+ TI VE S + +G + L +WD G Sbjct: 12 KFLVIGNAGTGKSCLLHQFIEKKFKDDS---NHTIGVEFGSKIINVGGKYVKLQIWDTAG 68 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ F + ++ + V+D+ S E + + DA++ Sbjct: 69 QERFRSVTRSY-----YRGAAGALLVYDITSRETYNALTNWL----------TDARMLAS 113 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS-IWDESLYKAWSQIVCSLI 183 + + ++ +K+ +L E S L+ TS + E++ +A+ Q ++ Sbjct: 114 QNIVIILCGNKK-DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKIL 172 Query: 184 PNMSNHQSN 192 + + + + Sbjct: 173 NKIESGELD 181 >4G01-B nrPDB Length = 181 Score = 35.5 bits (80), Expect = 0.033, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 24/188 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDV---EHSHLRFLGNMTLNLWDCGG 64 KL+L+G G+GKSS+ + +TI + + +WD G Sbjct: 14 KLVLLGDVGAGKSSL---VLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAG 70 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ + ++ I VFDV + + + + + L+ + +P+ + + Sbjct: 71 QER-----YHSLAPMYYRGAAAAIIVFDVTNQASFERAKKWVQELQA--QGNPNMVMALA 123 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDES-LYKAWSQIVCSLI 183 +K DL+ D R+ + E L TS + + + + +I L Sbjct: 124 GNKSDLL--DARKVTAEDAQTYAQEN-------GLFFMETSAKTATNVKEIFYEIARRL- 173 Query: 184 PNMSNHQS 191 P + ++ Sbjct: 174 PRVQPTEN 181 >5LDD-C nrPDB Length = 207 Score = 35.1 bits (79), Expect = 0.039, Method: Composition-based stats. Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 18/149 (12%) Query: 2 SSNNRKKLLL----MGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMT 56 S ++RKK+LL +G SG GK+S M + +SA +GA + + +T Sbjct: 2 SMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADF-LTREVMVDDRQVT 60 Query: 57 LNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYS 116 + LWD GQ+ F ++ + VFDV + + ++ + + L + S Sbjct: 61 MQLWDTAGQER-----FQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRD--EFLIQAS 113 Query: 117 P----DAKIFVLLHKMDLVQLDKREELFQ 141 P + VL K+D V+ KR + Sbjct: 114 PRDPENFPFVVLGIKID-VEESKRVISTK 141 >2RHD-A nrPDB Length = 175 Score = 35.1 bits (79), Expect = 0.040, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 63/147 (42%), Gaps = 16/147 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + F++ + D+ +D + + + L +WD GQ+ Sbjct: 11 KLLLIGDSGVGKSCLL-LRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQE 69 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F + ++ +I V+DV + +++ + + + + + ++ + Sbjct: 70 RFRTITSSY-----YRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMEN--VNKLLVGN 122 Query: 127 KMDLVQLDKREELFQIMMKNLSETSSE 153 K DLV +++ + ++ Sbjct: 123 KCDLVS-------KRVVTSDEGRELAD 142 >3E5H-A nrPDB Length = 178 Score = 34.7 bits (78), Expect = 0.050, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 79/179 (44%), Gaps = 17/179 (9%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMT--LNLWDCGGQ 65 K++++G SGK+S+ + F+ + + +D + GN+ L +WD GGQ Sbjct: 8 KIVVLGDGASGKTSL-TTCFAQETFGKQYKQTIGLDFFLRRITLPGNLNVTLQIWDIGGQ 66 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 + K D Q ++ V+D+ + + +++E + +K++ + S + L+ Sbjct: 67 TIG-----GKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESETQPLVALV 121 Query: 126 -HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVCSLI 183 +K+DL + + + + GF F ++ +S++ + ++ ++ Sbjct: 122 GNKIDL---EHMRTIKPEKHLRFCQEN---GFS--SHFVSAKTGDSVFLCFQKVAAEIL 172 >2REX-B nrPDB Length = 197 Score = 34.3 bits (77), Expect = 0.066, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 14/132 (10%) Query: 5 NRKKLLLMGRSGSGKSSMRSIIFSNYSAFD---TRRLGATIDVEHSHLRFLGNMTLNLWD 61 R KL+L+G GK++M ++ + T T +E R + L+LWD Sbjct: 9 ARCKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENYTACLETEEQR----VELSLWD 64 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 G Y+ + + ++ FD+ E + K ++ Y P ++ Sbjct: 65 TSGS-----PYYDNVRPLCYSDSDAVLLCFDISRPETVDSA--LKKWRTEILDYCPSTRV 117 Query: 122 FVLLHKMDLVQL 133 ++ K DL Sbjct: 118 LLIGCKTDLRTD 129 >3L0I-B nrPDB Length = 199 Score = 33.9 bits (76), Expect = 0.085, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + F++ + ++ +D + + G + L +WD GQ+ Sbjct: 35 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 93 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQ 111 F + ++ +I V+DV E +++ + + + + Sbjct: 94 RFRTITSSY-----YRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 133 >2WWX-A nrPDB Length = 175 Score = 33.9 bits (76), Expect = 0.088, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + F++ + ++ +D + + G + L +WD GQ+ Sbjct: 10 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 68 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQ 111 F + ++ +I V+DV E +++ + + + + Sbjct: 69 RFRTITSSY-----YRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 108 >1YZN-A nrPDB Length = 185 Score = 33.9 bits (76), Expect = 0.089, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 18/164 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRR-LGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 KLLL+G SG GKS + + D +G ++ L + L +WD GQ+ Sbjct: 23 KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKT-VKLQIWDTAGQE 81 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F + ++ +I V+DV E ++++ + + + S K+ V Sbjct: 82 RFRTITSSY-----YRGSHGIIIVYDVTDQESFNGVKMWLQEIDR-YATSTVLKLLV--- 132 Query: 127 KMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDES 170 + D ++ +++ ++++ ++ + TS D + Sbjct: 133 ---GNKCDLKD--KRVVEYDVAKEFADA--NKMPFLETSALDST 169 >2EW1-A nrPDB Length = 201 Score = 33.9 bits (76), Expect = 0.091, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 79/184 (42%), Gaps = 21/184 (11%) Query: 8 KLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 K++L+G +G GK+ +R + +G ++ + + L +WD GQ+ Sbjct: 28 KIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEI-NGEKVKLQIWDTAGQE 86 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL- 125 F + ++ LI +D+ E + + + L+++ +Y+ + I VL+ Sbjct: 87 RFRSITQSY-----YRSANALILTYDITCEESFRCLPEW---LREIEQYASNKVITVLVG 138 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWD-ESLYKAWSQIVCSLIP 184 +K+DL + + + + +E SE ++ TS + +++ K + + C LI Sbjct: 139 NKIDLAE-------RREVSQQRAEEFSEA--QDMYYLETSAKESDNVEKLFLDLACRLIS 189 Query: 185 NMSN 188 Sbjct: 190 EARQ 193 >5SZH-B nrPDB Length = 203 Score = 33.9 bits (76), Expect = 0.091, Method: Composition-based stats. Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 7/91 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQD 66 KLLL+G SG GKS + + F++ + ++ +D + + G + L +WD GQ+ Sbjct: 12 KLLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQE 70 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTE 97 F + ++ +I V+DV E Sbjct: 71 RFRTITSSY-----YRGAHGIIVVYDVTDQE 96 >5LPN-A nrPDB Length = 177 Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 68/160 (42%), Gaps = 20/160 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGAT-IDVEHSHLRFLGN-MTLNLWDCGGQ 65 KLLL+G SG GK+ + + AF+T + ID + + G + L +WD GQ Sbjct: 13 KLLLIGDSGVGKT--CVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 70 Query: 66 DVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLL 125 + F + ++ ++ V+D+ + + ++I + + + + + D + +L Sbjct: 71 ERFHTITTSY-----YRGAMGIMLVYDITNGKSFENISKWLRNIDE--HANEDVERMLLG 123 Query: 126 HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS 165 +K D+ DKR + E + F TS Sbjct: 124 NKCDM--DDKRVVPKGKGEQIARE-------HGIRFFETS 154 >1WMS-A nrPDB Length = 177 Score = 33.5 bits (75), Expect = 0.11, Method: Composition-based stats. Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 11/103 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVE--HSHLRFLG-NMTLNLWDCGG 64 K++L+G G GKSS+ + +N FDT+ L TI VE + L G +T+ +WD G Sbjct: 9 KVILLGDGGVGKSSLMNRYVTN--KFDTQ-LFHTIGVEFLNKDLEVDGHFVTMQIWDTAG 65 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAK 107 Q+ F + ++ + F V+ ++ +++ + K Sbjct: 66 QER-----FRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKK 103 >6GDG-D nrPDB Length = 248 Score = 33.5 bits (75), Expect = 0.13, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 9/126 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 +LLL+G SGKS++ + + G T + + + + + +++D GGQ Sbjct: 37 RLLLLGADNSGKSTIVKQM--RILHGGSGGSGGTSGIFETKFQ-VDKVNFHMFDVGGQRD 93 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHK 127 + F V +I V D L++ K++ R + + L+K Sbjct: 94 ERRKWI-----QCFNDVTAIIFVVDSSDYNRLQEALNLFKSIWNNRWLRT-ISVILFLNK 147 Query: 128 MDLVQL 133 DL+ Sbjct: 148 QDLLAE 153 >1YVD-A nrPDB Length = 169 Score = 33.2 bits (74), Expect = 0.13, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 65/161 (40%), Gaps = 22/161 (13%) Query: 8 KLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 K+ L+G +G GKSS+ + ++ +GA+ + + + +WD GQ+ Sbjct: 7 KVCLLGDTGVGKSSIVWRFVEDSFDPNINPTIGASFMTKTVQYQNELH-KFLIWDTAGQE 65 Query: 67 VF--MENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 F + + ++ I V+D+ E ++ + + L+Q P + + Sbjct: 66 RFRALAPMY-------YRGSAAAIIVYDITKEETFSTLKNWVRELRQ--HGPPSIVVAIA 116 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS 165 +K DL + +M+ ++ ++ + I TS Sbjct: 117 GNKCDLTD-------VREVMERDAKDYADS--IHAIFVETS 148 >2F7S-A nrPDB Length = 217 Score = 33.2 bits (74), Expect = 0.16, Method: Composition-based stats. Identities = 27/153 (17%), Positives = 56/153 (36%), Gaps = 28/153 (18%) Query: 55 MTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQ-LR 113 + L LWD GQ+ F F+ + +FD+ S + ++ + L+ Sbjct: 84 VHLQLWDTAGQERFRSLT-----TAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAY 138 Query: 114 KYSPDAKIFVLL-HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLY 172 +PD VL+ +K DL + + + + ++ + F TS Sbjct: 139 CENPDI---VLIGNKADLPD-------QREVNERQARELAD--KYGIPYFETS------- 179 Query: 173 KAWSQIVCSLIPNMSNHQSNLKKFKEIMNALEI 205 A Q V + + +K+ ++ + +I Sbjct: 180 AATGQNVEKAVETL--LDLIMKRMEQCVEKTQI 210 >2H57-A nrPDB Length = 190 Score = 32.8 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 19/128 (14%) Query: 9 LLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 +L +G SGK+++ + SN + + TI + ++ ++D GQ Sbjct: 24 VLCLGLDNSGKTTIINKLKPSNAQSQNIL---PTIGFSIEKFKSSS-LSFTVFDMSGQGR 79 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAK-----IF 122 + + +H ++ Q +I V D + + + L L PD K I Sbjct: 80 YRNLW-----EHYYKEGQAIIFVIDSSDR---LRMVVAKEELDTLL-NHPDIKHRRIPIL 130 Query: 123 VLLHKMDL 130 +KMDL Sbjct: 131 FFANKMDL 138 >4FMC-F nrPDB Length = 117 Score = 32.8 bits (73), Expect = 0.19, Method: Composition-based stats. Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 7/104 (6%) Query: 9 LLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGGQDV 67 LLL+G SG GKS + + F++ + ++ +D + + G + L +WD GQ+ Sbjct: 1 LLLIGDSGVGKSCLL-LRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQER 59 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQ 111 F + ++ +I V+DV E +++ + + + + Sbjct: 60 FRTITSSY-----YRGAHGIIVVYDVTDQESFNNVKQWLQEIDR 98 >2NTY-C nrPDB Length = 180 Score = 32.0 bits (71), Expect = 0.34, Method: Composition-based stats. Identities = 33/137 (24%), Positives = 64/137 (46%), Gaps = 11/137 (8%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNL 59 MS++ K + +G GK+ M +I + F T + D +++ GN + L L Sbjct: 1 MSASRFIKCVTVGDGAVGKTCM--LISYTSNTFPTDYVPTVFDNFSANVVVDGNTVNLGL 58 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ+ + + + ++ V I F + S +++ K + +LR Y+P Sbjct: 59 WDTAGQED-----YNRLRPLSYRGADVFILAFSLISKASYENVA--KKWIPELRHYAPGV 111 Query: 120 KIFVLLHKMDLVQLDKR 136 I ++ K+D ++ DK+ Sbjct: 112 PIILVGTKLD-LRDDKQ 127 >3RAB-A nrPDB Length = 169 Score = 31.6 bits (70), Expect = 0.46, Method: Composition-based stats. Identities = 31/176 (17%), Positives = 73/176 (41%), Gaps = 23/176 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVE---HSHLRFLGNMTLNLWDCGG 64 K+L++G S GK+S +F T +T+ ++ + R + L +WD G Sbjct: 7 KILIIGNSSVGKTSF---LFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIWDTAG 63 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 Q+ + ++ I ++D+ + E ++ ++ +K + A++ ++ Sbjct: 64 QERYRTITTAY-----YRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDN--AQVLLV 116 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDE-SLYKAWSQIV 179 +K D+ D+R + + + GF F S D ++ + + ++V Sbjct: 117 GNKCDM--EDERVVSS----ERGRQLADHLGFE---FFEASAKDNINVKQTFERLV 163 >2J0V-A nrPDB Length = 212 Score = 31.2 bits (69), Expect = 0.64, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 65/167 (38%), Gaps = 15/167 (8%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNL 59 MS + K + +G GK+ M SN D + D +++ G + L L Sbjct: 4 MSVSKFIKCVTVGDGAVGKTCMLICYTSNKFPTD--YIPTVFDNFSANVAVDGQIVNLGL 61 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ+ +++ + ++ + + F + S +++ K + +LR+++P+ Sbjct: 62 WDTAGQED-----YSRLRPLSYRGADIFVLAFSLISKASYENV--LKKWMPELRRFAPNV 114 Query: 120 KIFVLLHKMDLVQL-----DKREELFQIMMKNLSETSSEFGFPNLIG 161 I ++ K+DL D + + L + + Sbjct: 115 PIVLVGTKLDLRDDKGYLADHTNVITSTQGEELRKQIGAAAYIECSS 161 >4LHX-A nrPDB Length = 186 Score = 31.2 bits (69), Expect = 0.65, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDCGGQD 66 KLLL+G SG GK+ + FS + T ID + + G + L +WD GQ+ Sbjct: 12 KLLLIGDSGVGKTCVL-FRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F ++ ++ V+D+ + + +I + + +++ S D + +L + Sbjct: 71 RFRTITTAY-----YRGAMGIMLVYDITNEKSFDNIRNWIRNIEE--HASADVEKMILGN 123 Query: 127 KMDLVQLDKREELFQ 141 K D V ++ + Sbjct: 124 KCD-VNDKRQVSKER 137 >5YOZ-A nrPDB Length = 177 Score = 30.8 bits (68), Expect = 0.69, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 63/151 (41%), Gaps = 11/151 (7%) Query: 8 KLLLMGRSGSGKSSMR-SIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 K++++G SG+GKSS+ + + A +GA + + + + +WD G Sbjct: 17 KIVMLGESGAGKSSIALRFTRNEFLANQETTIGAAF-LSKTVMIDGRALKYEIWDTAG-- 73 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F ++ + V+D+ ++E LK + + K L+ P I ++ + Sbjct: 74 ---LERFRSLAPIYYRGASGALVVYDITNSESLKKAQTWIKELRA--NADPSLIIVLVGN 128 Query: 127 KMDLVQLDKREELFQIMMKNLSETSSEFGFP 157 K DL L R+ F+ + +E + Sbjct: 129 KKDLGSL--RQVSFEDGQRLAAEEQLAAFYE 157 >1D5C-A nrPDB Length = 162 Score = 30.8 bits (68), Expect = 0.69, Method: Composition-based stats. Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 15/147 (10%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDV---EHSHLRFLGNMTLNLWDC 62 + KL+ +G GK+S+ I Y FD +TI + + G + L LWD Sbjct: 1 KYKLVFLGEQAVGKTSI--ITRFMYDTFDNNY-QSTIGIDFLSKTLYLDEGPVRLQLWDT 57 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIF 122 GQ+ F + I V+D+ + + ++ + + + L + D I Sbjct: 58 AGQER-----FRSLIPSYIRDSAAAIVVYDITNRQSFENTTKWIQDI--LNERGKDVIIA 110 Query: 123 VLLHKMDLVQLDKREELFQIMMKNLSE 149 ++ +K DL D R+ ++ M+ E Sbjct: 111 LVGNKTDL--GDLRKVTYEEGMQKAQE 135 >2G77-B nrPDB Length = 198 Score = 30.8 bits (68), Expect = 0.76, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 10/88 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLR---FLGNMTLNLWDCGG 64 K++++G S GK+ + + T ATI V+ + + LWD G Sbjct: 31 KIIVIGDSNVGKTCLTYRFCAGRFPDRT---EATIGVDFRERAVDIDGERIKIQLWDTAG 87 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFD 92 Q+ F + H ++ V ++ V+D Sbjct: 88 QERFRK----SMVQHYYRNVHAVVFVYD 111 >5SZI-A nrPDB Length = 209 Score = 30.8 bits (68), Expect = 0.77, Method: Composition-based stats. Identities = 30/135 (22%), Positives = 59/135 (43%), Gaps = 10/135 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDCGGQD 66 KLLL+G SG GK+ + FS + T ID + + G + L +WD GQ+ Sbjct: 12 KLLLIGDSGVGKTCVL-FRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQE 70 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 F ++ ++ V+D+ + + +I + + +++ S D + +L + Sbjct: 71 RFRTITTAY-----YRGAMGIMLVYDITNEKSFDNIRNWIRNIEE--HASADVEKMILGN 123 Query: 127 KMDLVQLDKREELFQ 141 K D V ++ + Sbjct: 124 KCD-VNDKRQVSKER 137 >2A5J-A nrPDB Length = 191 Score = 30.8 bits (68), Expect = 0.78, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 18/112 (16%) Query: 55 MTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRK 114 + L +WD GQ+ F + ++ + V+D+ E + + L+ R+ Sbjct: 70 IKLQIWDTAGQESFRSITRSY-----YRGAAGALLVYDITRRETFNHLTSW---LEDARQ 121 Query: 115 YSPDAKIFVLL-HKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS 165 +S + +L+ +K DL E + + + E + LI TS Sbjct: 122 HSSSNMVIMLIGNKSDL-------ESRRDVKREEGEAFAR--EHGLIFMETS 164 >4MYH-A nrPDB Length = 598 Score = 30.8 bits (68), Expect = 0.79, Method: Composition-based stats. Identities = 24/101 (23%), Positives = 39/101 (38%), Gaps = 12/101 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 K ++G SGSGKS++ ++F Y R L D++ + L + G Sbjct: 367 KTAIVGSSGSGKSTILKLVFRFYDPESGRILINGRDIKEYDIDALRKVI-------GVVP 419 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKA 108 F D I++ V+ D EV+ +E A Sbjct: 420 QDTPLFN---DTIWENVK--FGRIDATDEEVITVVEKAQLA 455 >2G6B-A nrPDB Length = 180 Score = 30.5 bits (67), Expect = 0.86, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 59/153 (38%), Gaps = 20/153 (13%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN------MTLNLWD 61 K++L+G SG GK+ ++ AF +T+ + R + L +WD Sbjct: 12 KVMLVGDSGVGKT--CLLVRFKDGAFLAGTFISTVGI---DFRNKVLDVDGVKVKLQMWD 66 Query: 62 CGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GQ+ F ++ L+ ++DV + +I+ + + + ++ D + Sbjct: 67 TAGQERFRSVTHAY-----YRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQH--DVAL 119 Query: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEF 154 +L +K+D R + K E F Sbjct: 120 MLLGNKVDSAHE--RVVKREDGEKLAKEYGLPF 150 >6IAE-A nrPDB Length = 223 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 40/108 (37%), Gaps = 18/108 (16%) Query: 8 KLLLMGRSGSGKSSMRSII----------FSNYSAFDTRRLGATIDVEHSHLRFLGNM-- 55 K+L++G S SGKS++ + + + + + +D R + Sbjct: 11 KILVLGPSKSGKSTVTNFLAGTRDTPTKEYHETNPLRVLEVEIALDDTRRSGRQAAGLKK 70 Query: 56 -TLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDI 102 + LWD GG + I +I+VF+ E K++ Sbjct: 71 AVVQLWDVGGSSKHQAGW-----PAIASNADGIIYVFNPEVKGSEKEL 113 >1Z06-A nrPDB Length = 189 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 37/88 (42%), Gaps = 10/88 (11%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLR---FLGNMTLNLWDCGG 64 K++++G S GK+ + + T ATI V+ + + LWD G Sbjct: 22 KIIVIGDSNVGKTCLTYRFCAGRFPDRT---EATIGVDFRERAVDIDGERIKIQLWDTAG 78 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFD 92 Q+ F + H ++ V ++ V+D Sbjct: 79 QERFRK----SMVQHYYRNVHAVVFVYD 102 >3DPU-A nrPDB Length = 535 Score = 30.5 bits (67), Expect = 1.1, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 77/198 (38%), Gaps = 33/198 (16%) Query: 8 KLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLG-------ATIDVEHSHLRFLGNMTLNL 59 K+ L+G +GK+S+ + +I + +++ G A + L + Sbjct: 43 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 102 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GGQ++ H F M + +++ ++S + + +++ SP Sbjct: 103 WDFGGQEIM-------HASHQFFMTRSSVYMLLLDSRTDSNK-HYWLRHIEKYGGKSP-- 152 Query: 120 KIFVLLHKMD-----LVQLDKREELFQIMMKNLSETSSEFG---------FPNLIGFPTS 165 + V+++K+D ++ K E F + S + G + + P S Sbjct: 153 -VIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVLHPDS 211 Query: 166 IWDESLYKAWSQIVCSLI 183 I+ L +W ++ L+ Sbjct: 212 IYGTPLAPSWIKVKEKLV 229 >1GPM-A nrPDB Length = 525 Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 27/170 (15%), Positives = 60/170 (35%), Gaps = 31/170 (18%) Query: 10 LLMGRSGSGKSSMRSIIFSN---------YSAFDTRRL---GATIDVEHSHLRFLGNMTL 57 +++G SG SS+ +++ + RL +D+ H L Sbjct: 230 VILGLSGGVDSSVTAMLLHRAIGKNLTCVFVDNGLLRLNEAEQVLDMFGDHFG------L 283 Query: 58 NLWDCGGQDVFM-----ENYFTKQKDHIFQMVQVLIHVFD-----VESTEVLKDIEIFAK 107 N+ +D F+ EN ++ I + V + VFD +E + L I+ Sbjct: 284 NIVHVPAEDRFLSALAGENDPEAKRKIIGR---VFVEVFDEEALKLEDVKWLAQGTIYPD 340 Query: 108 ALKQLRKYSPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFP 157 ++ + A + H + + + + L + + + + + G Sbjct: 341 VIESAASATGKAHVIKSHHNVGGLPKEMKMGLVEPLKELFKDEVRKIGLE 390 >2WBL-C nrPDB Length = 180 Score = 30.1 bits (66), Expect = 1.3, Method: Composition-based stats. Identities = 32/137 (23%), Positives = 63/137 (45%), Gaps = 11/137 (8%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNL 59 MS+ K + +G GK+ M +I + F T + D +++ G+ + L L Sbjct: 1 MSTARFIKCVTVGDGAVGKTCM--LISYTGNTFPTDYVPTVFDNFSANVVVDGSTVNLGL 58 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ+ + + + ++ V + F + S ++I K L +L+ Y+P Sbjct: 59 WDTAGQED-----YNRLRPLSYRGADVFLLAFSLISKASYENIH--KKWLPELKHYAPGI 111 Query: 120 KIFVLLHKMDLVQLDKR 136 I ++ K+D ++ DK+ Sbjct: 112 PIVLVGTKLD-LRDDKQ 127 >5YMX-A nrPDB Length = 203 Score = 30.1 bits (66), Expect = 1.4, Method: Composition-based stats. Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 8/106 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 K++ G GK++ I++ +A +T+ ++ E F + L+L + G Sbjct: 14 KIVYYGPGLCGKTTNLQYIYNKTAA-ETKGKLISLSTETDRTLFFDFLPLSLGEIRGFKT 72 Query: 68 FMENY-------FTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFA 106 Y + + I + V ++ V D + + ++E Sbjct: 73 RFHLYTVPGQVFYDASRKLILKGVDGVVFVADSQIERMEANMESLE 118 >5CM8-B nrPDB Length = 203 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 9/124 (7%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDCGGQD 66 K++++G G GKS++ + D D + G + +++ D GQ+ Sbjct: 15 KVIMVGSGGVGKSALTLQFMYDEFVED--YEPTKADSYRKKVVLDGEEVQIDILDTAGQE 72 Query: 67 VFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLH 126 + +D+ F+ + + VF + E + + F + + ++ K ++ + Sbjct: 73 D-----YAAIRDNYFRSGEGFLCVFSITDDESFQATQEFREQILRV-KNDESIPFLLVGN 126 Query: 127 KMDL 130 K DL Sbjct: 127 KCDL 130 >2G3Y-A nrPDB Length = 211 Score = 29.7 bits (65), Expect = 1.5, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 71/186 (38%), Gaps = 22/186 (11%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSII--FSNYSAFDTRRLGATI--DVEHSHLRFLGNMTL 57 S N +++L+G G GKS++ +I + D LG + L Sbjct: 33 SGNTYYRVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILL 92 Query: 58 NLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSP 117 ++W+ G++ ++ DH Q+ + V+ + + L++ R+ + Sbjct: 93 DMWENKGENEWL-------HDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQ-TE 144 Query: 118 DAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS-IWDESLYKAWS 176 D I ++ +K DLV + ++SE + + TS ++ + + Sbjct: 145 DIPIILVGNKSDLV---------RCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFE 195 Query: 177 QIVCSL 182 IV + Sbjct: 196 GIVRQV 201 >5J8B-z nrPDB Length = 679 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 20/149 (13%) Query: 56 TLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY 115 +L D G FT + V+ ++ V D + + F AL+ Sbjct: 146 VFHLIDTPGHVD-----FTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGHVI 200 Query: 116 SPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAW 175 P +++K+D + + E+ + + L + E F + E + + Sbjct: 201 IP------VINKID-LPNARPLEVALEVEEVLGLPADEA------IFASGKTGEGVEEIL 247 Query: 176 SQIVCSLIPNMSNHQSNLK--KFKEIMNA 202 IV + P + ++ LK F + +A Sbjct: 248 EAIVQRIPPPKGDPEAPLKALIFDSVYDA 276 >5IMR-C nrPDB Length = 610 Score = 29.7 bits (65), Expect = 1.7, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 20/149 (13%) Query: 56 TLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY 115 +L D G FT + V+ ++ V D + + F AL+ Sbjct: 77 VFHLIDTPGHVD-----FTYEVSRALAAVEGVLLVVDASQGVEAETLAKFYMALEHGHVI 131 Query: 116 SPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAW 175 P +++K+D + + E+ + + L + E F + E + + Sbjct: 132 IP------VINKID-LPNARPLEVALEVEEVLGLPADEA------IFASGKTGEGVEEIL 178 Query: 176 SQIVCSLIPNMSNHQSNLK--KFKEIMNA 202 IV + P + ++ LK F + +A Sbjct: 179 EAIVQRIPPPKGDPEAPLKALIFDSVYDA 207 >2CJW-A nrPDB Length = 192 Score = 29.7 bits (65), Expect = 1.8, Method: Composition-based stats. Identities = 32/195 (16%), Positives = 74/195 (37%), Gaps = 22/195 (11%) Query: 8 KLLLMGRSGSGKSSMRSII--FSNYSAFDTRRLGATI--DVEHSHLRFLGNMTLNLWDCG 63 +++L+G G GKS++ +I + D LG + L++W+ Sbjct: 8 RVVLIGEQGVGKSTLANIFAGVHDSMDSDCEVLGEDTYERTLMVDGESATIILLDMWENK 67 Query: 64 GQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFV 123 G++ ++ DH Q+ + V+ + + L++ R+ + D I + Sbjct: 68 GENEWL-------HDHCMQVGDAYLIVYSITDRASFEKASELRIQLRRARQ-TEDIPIIL 119 Query: 124 LLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS-IWDESLYKAWSQIVCSL 182 + +K DLV + ++SE + + TS ++ + + IV + Sbjct: 120 VGNKSDLV---------RCREVSVSEGRACAVVFDCKFIETSAAVQHNVKELFEGIVRQV 170 Query: 183 IPNMSNHQSNLKKFK 197 + + N ++ Sbjct: 171 RLRRDSKEKNERRLA 185 >3BWD-D nrPDB Length = 182 Score = 29.3 bits (64), Expect = 2.0, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 15/139 (10%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFD---TRRLGATIDVEHSHLRFLGNMTL 57 MS++ K + +G GK+ + SN D T + +V + + L Sbjct: 3 MSASRFIKCVTVGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANV----VVNGATVNL 58 Query: 58 NLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSP 117 LWD GQ+ + + + ++ V I F + S +++ K + +L+ Y+P Sbjct: 59 GLWDTAGQED-----YNRLRPLSYRGADVFILAFSLISKASYENVS--KKWIPELKHYAP 111 Query: 118 DAKIFVLLHKMDLVQLDKR 136 I ++ K+D ++ DK+ Sbjct: 112 GVPIVLVGTKLD-LRDDKQ 129 >6FF8-A nrPDB Length = 181 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 22/98 (22%), Positives = 39/98 (39%), Gaps = 10/98 (10%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSA---FDTRRLGATIDVEHSHLRFLGNMTLNLWDCGG 64 K+L++G G GK+S+ + T + + V + R L + L LWD G Sbjct: 10 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL--VRLQLWDIAG 67 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDI 102 + F K+ V + VFD+ + + + Sbjct: 68 LERFGNMTRVYYKE----AVGAFV-VFDISRSSTFEAV 100 >1Z0F-A nrPDB Length = 179 Score = 29.3 bits (64), Expect = 2.1, Method: Composition-based stats. Identities = 16/96 (16%), Positives = 38/96 (39%), Gaps = 9/96 (9%) Query: 55 MTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRK 114 + L +WD GQ+ F + ++ + V+D+ + + + L Sbjct: 64 IKLQIWDTAGQERFRAVTRSY-----YRGAAGALMVYDITRRSTYNHLSSWLTDARNL-- 116 Query: 115 YSPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSET 150 +P+ I ++ +K DL +R+ ++ + E Sbjct: 117 TNPNTVIILIGNKADL--EAQRDVTYEEAKQFAEEN 150 >3A58-B nrPDB Length = 188 Score = 29.3 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 64/147 (43%), Gaps = 10/147 (6%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNL 59 + ++ R+KL+++G GK+ +I ++ F + + + + G + L L Sbjct: 5 VGNSIRRKLVIVGDGACGKT--CLLIVNSKGQFPEVYVPTVFENYVADVEVDGRRVELAL 62 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GQ+ + + + + V++ F ++ + L++++ K + ++ + Sbjct: 63 WDTAGQED-----YDRLRPLSYPDSNVVLICFSIDLPDSLENVQ--EKWIAEVLHFCQGV 115 Query: 120 KIFVLLHKMDLVQLDKREELFQIMMKN 146 I ++ K+DL + E + + Sbjct: 116 PIILVGCKVDLRNDPQTIEQLRQEGQQ 142 >3QB7-A nrPDB Length = 132 Score = 29.3 bits (64), Expect = 2.2, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 27 FSNYSAFDTRRLGATIDVEHSH---LRFLGNMTLNLWDCGG 64 F ++ DTR LGAT H H +RFL + NLW G Sbjct: 58 FYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAG 98 >1Z0A-A nrPDB Length = 174 Score = 28.9 bits (63), Expect = 2.5, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 44/112 (39%), Gaps = 18/112 (16%) Query: 55 MTLNLWDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRK 114 + L +WD GQ+ F + ++ + V+D+ + + + L+ R+ Sbjct: 59 IKLQIWDTAGQESFRSITRSY-----YRGAAGALLVYDITRRDTFNHLTTW---LEDARQ 110 Query: 115 Y-SPDAKIFVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTS 165 + + + I ++ +K DL E + + K E + LI TS Sbjct: 111 HSNSNMVIMLIGNKSDL-------ESRREVKKEEGEAFAR--EHGLIFMETS 153 >1Y63-A nrPDB Length = 184 Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 3/75 (4%) Query: 9 LLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD-- 66 +L+ G G+GK+SM +I + F +G + H + + + ++ + +D Sbjct: 13 ILITGTPGTGKTSMAEMIAAELDGFQHLEVGKLVKENHFYTEYDTELDTHIIEEKDEDRL 72 Query: 67 -VFMENYFTKQKDHI 80 FME + +H+ Sbjct: 73 LDFMEPIMVSRGNHV 87 >6HLU-A nrPDB Length = 974 Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 35/198 (17%), Positives = 77/198 (38%), Gaps = 33/198 (16%) Query: 8 KLLLMGRSGSGKSSM-RSIIFSNYSAFDTRRLG-------ATIDVEHSHLRFLGNMTLNL 59 K+ L+G +GK+S+ + +I + +++ G A + L + Sbjct: 482 KVHLIGDGMAGKTSLLKQLIGETFDPKESQTHGLNVVTKQAPNIKGLENDDELKECLFHF 541 Query: 60 WDCGGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDA 119 WD GGQ++ H F M + +++ ++S + + +++ SP Sbjct: 542 WDFGGQEIM-------HASHQFFMTRSSVYMLLLDSRTDSNK-HYWLRHIEKYGGKSP-- 591 Query: 120 KIFVLLHKMD-----LVQLDKREELFQIMMKNLSETSSEFG---------FPNLIGFPTS 165 + V+++K+D ++ K E F + S + G + + P S Sbjct: 592 -VIVVMNKIDENPSYNIEQKKINERFPAIENRFHRISCKNGDGVESIAKSLKSAVLHPDS 650 Query: 166 IWDESLYKAWSQIVCSLI 183 I+ L +W ++ L+ Sbjct: 651 IYGTPLAPSWIKVKEKLV 668 >4QXA-A nrPDB Length = 208 Score = 28.9 bits (63), Expect = 2.9, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 38/100 (38%), Gaps = 5/100 (5%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDV 67 K++L+G G GKSS+ + +N + +T+ +WD G Sbjct: 10 KIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAG--- 66 Query: 68 FMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAK 107 F + ++ + F V+ ++ +++ + K Sbjct: 67 --LERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKK 104 >1YZU-A nrPDB Length = 170 Score = 28.9 bits (63), Expect = 3.1, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 58/131 (44%), Gaps = 13/131 (9%) Query: 8 KLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQD 66 K++L+G GK+S + + ++ L A+ + ++ + L +WD GQ+ Sbjct: 8 KVVLLGEGCVGKTSLVLRYCENKFNDKHITTLQASFLTKKLNIGG-KRVNLAIWDTAGQE 66 Query: 67 VF--MENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 F + + ++ I V+D+ + + ++ + K L+++ + + ++ Sbjct: 67 RFHALGPIY-------YRDSNGAILVYDITDEDSFQKVKNWVKELRKMLGN--EICLCIV 117 Query: 125 LHKMDLVQLDK 135 +K+DL + Sbjct: 118 GNKIDLEKERH 128 >5ZVP-A nrPDB Length = 181 Score = 28.9 bits (63), Expect = 3.2, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 3/64 (4%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLG-NMTLNLWDCGG 64 R+KL+++G GK+ +I ++ F + + + + G ++ L LWD G Sbjct: 5 RRKLVIVGDGACGKT--CLLIVNSKGTFPEVYVPTVFENYVADVEVDGKHVELALWDTAG 62 Query: 65 QDVF 68 Q+ + Sbjct: 63 QEDY 66 >4WNR-A nrPDB Length = 349 Score = 28.9 bits (63), Expect = 3.2, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 79/189 (41%), Gaps = 27/189 (14%) Query: 5 NRKKLLLMGRSGSGKSS-MRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGN-MTLNLWDC 62 N K+LL+G +GK+S ++ ++ + + + G I+++ + + +N WD Sbjct: 40 NEVKVLLVGDGEAGKTSLLKRLLGEGFDGNEHQTQG--INIKKWGFKDKDKEIKVNFWDF 97 Query: 63 GGQDVFMENY-FTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKI 121 GGQ++ + F K ++ I V D E + LK +R + D+ + Sbjct: 98 GGQEIMHATHQFFLSKRSLY------ILVLDSRRDEKAE------YWLKHIRSFGGDSPV 145 Query: 122 FVLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYKAWSQIVCS 181 V L+K+D + EL + ++ + F S ++ + +SQ + Sbjct: 146 LVALNKID---ENPSFELNRKFLQEKYPSIK-------GFFRISCKEDRGIEGFSQKLKK 195 Query: 182 LIPNMSNHQ 190 + + + Q Sbjct: 196 ELLKVEHMQ 204 >1BBN-A nrPDB Length = 133 Score = 28.9 bits (63), Expect = 3.2, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%) Query: 27 FSNYSAFDTRRLGATIDVEHSH---LRFLGNMTLNLWDCGG 64 F ++ DTR LGAT H H +RFL + NLW G Sbjct: 59 FYSHHEKDTRCLGATAQQFHRHKQLIRFLKRLDRNLWGLAG 99 >2GTH-A nrPDB Length = 370 Score = 28.5 bits (62), Expect = 4.1, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 27/167 (16%) Query: 25 IIFSNYSAFDT-----RRLGATIDVEHSHLRFLGNMTLN------LWDCGGQDVFMENYF 73 ++F N + F T +I H L+ N+ ++ LWD VF + + Sbjct: 42 VVFKNNTPFPTNVAVELFAKRSIRP-HPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTY 100 Query: 74 TKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHKMDLVQL 133 K Q ++ L +FD L+ F K + + K + +++ Sbjct: 101 KVCKYTDLQCIESLNVLFDGRDNGALEA---FKKCRNGVYINTTKIK------SLSMIKG 151 Query: 134 DKREELFQIMMKNLSETSSEFGF------PNLIGFPTSIWDESLYKA 174 +R +L ++++ + ++ EF F ++I T + S Y++ Sbjct: 152 PQRADLNGVVVEKVGDSDVEFWFAVRKDGDDVIFSRTGSLEPSHYRS 198 >4CZ2-A nrPDB Length = 230 Score = 28.2 bits (61), Expect = 4.5, Method: Composition-based stats. Identities = 38/199 (19%), Positives = 71/199 (35%), Gaps = 24/199 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSA---FDTRRLGATIDVEHSHLRFLGNMTLNLWDCGG 64 K+L++G G GK+S+ + T + + V + R L + L LWD G Sbjct: 32 KVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTL--VRLQLWDIAG 89 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQL--RKYSPDAKIF 122 + F K+ + + VFD+ + + + + L Sbjct: 90 LERFGNMTRVYYKEAM----GAFV-VFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAV 144 Query: 123 VLLHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDE-SLYKAWSQIVCS 181 +L +K D + + E GF F TS D ++ +A +V Sbjct: 145 LLANKCDQNKDSSMSPSQMD------QFCKEHGFAG--WFETSAKDNINIEEAARFLVEK 196 Query: 182 LIPN---MSNHQSNLKKFK 197 ++ N N ++++ K K Sbjct: 197 MLVNHQSFPNEENDVDKIK 215 >2TMK-A nrPDB Length = 216 Score = 28.2 bits (61), Expect = 4.6, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 22/56 (39%), Gaps = 8/56 (14%) Query: 4 NNRKKLLLMGRSGSGKSSMRSIIFSNYSAF--------DTRRLGATIDVEHSHLRF 51 K +L+ G +GK++ +I++ + R+G I+ + F Sbjct: 3 GRGKLILIEGLDRTGKTTQCNILYKKLQPNCKLLKFPERSTRIGGLINEYLTDDSF 58 >5GIE-A nrPDB Length = 256 Score = 28.2 bits (61), Expect = 4.7, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 22/129 (17%) Query: 20 SSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDVFMENYFTKQKDH 79 +S I+ SA + L + + WDCG QD + + H Sbjct: 88 TSDDQIVLLKSSAIEVIMLRSNQSFTMDDMS---------WDCGSQDYKYDVTDVSKAGH 138 Query: 80 IFQMVQVLI-HVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHKMDLVQLDKREE 138 ++++ LI ++ + ++ + A+ SPD VQ K E Sbjct: 139 TLELIEPLIKFQVGLKKLNLHEEEHVLLMAICI---VSPDR---------PGVQDAKLVE 186 Query: 139 LFQIMMKNL 147 Q + N Sbjct: 187 AIQDRLSNT 195 >3TSO-A nrPDB Length = 178 Score = 28.2 bits (61), Expect = 4.8, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 72/185 (38%), Gaps = 23/185 (12%) Query: 8 KLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFL---GNMTLNLWDCGG 64 K++L+G SG GK+++ S N + D+R TI VE S + + +WD G Sbjct: 12 KVVLIGESGVGKTNLLSRFTRNEFSHDSR---TTIGVEFSTRTVMLGTAAVKAQIWDTAG 68 Query: 65 QDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVL 124 + + ++ + VFD+ + +E + LK+L ++ + +L Sbjct: 69 LERYRAITSAY-----YRGAVGALLVFDLTKHQTYAVVERW---LKELYDHAEATIVVML 120 Query: 125 LHKMDLVQLDKREELFQIMMKNLSETSSEFGFPNLIGFPTSIWDESLYK-AWSQIVCSLI 183 + + + + M + L+ TS D + + A+ ++ + Sbjct: 121 VGNKSDLSQAREVPTEEARMFAENN--------GLLFLETSALDSTNVELAFETVLKEIF 172 Query: 184 PNMSN 188 +S Sbjct: 173 AKVSK 177 >1RJK-A nrPDB Length = 292 Score = 28.2 bits (61), Expect = 5.2, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 22/129 (17%) Query: 20 SSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDVFMENYFTKQKDH 79 +S I+ SA + L + + WDCG QD + + H Sbjct: 89 TSDDQIVLLKSSAIEVIMLRSNQSFTMDDMS---------WDCGSQDYKYDVTDVSKAGH 139 Query: 80 IFQMVQVLI-HVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIFVLLHKMDLVQLDKREE 138 ++++ LI ++ + ++ + A+ SPD VQ K E Sbjct: 140 TLELIEPLIKFQVGLKKLNLHEEEHVLLMAICI---VSPDR---------PGVQDAKLVE 187 Query: 139 LFQIMMKNL 147 Q + N Sbjct: 188 AIQDRLSNT 196 >2FFQ-A nrPDB Length = 171 Score = 27.8 bits (60), Expect = 6.8, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 56/151 (37%), Gaps = 19/151 (12%) Query: 6 RKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDV---EHSHLRFLGNMTLNLWDC 62 + KL+ +G GK+S+ I Y +FD ATI + + + L LWD Sbjct: 2 KFKLVFLGEQSVGKTSL--ITRFMYDSFDNTY-QATIGIDFLSKTMYLEDRTVRLQLWDT 58 Query: 63 GGQDVFMENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKYSPDAKIF 122 GQ+ F + V + V+D + ++ F + K + + Sbjct: 59 AGQER-----FRSLIPSYIRDSTVAVVVYD------ITNLNSFQQTSKWIDDVRTERGSD 107 Query: 123 VLLHKMDLVQL--DKREELFQIMMKNLSETS 151 V++ + DKR+ + + E S Sbjct: 108 VIIMLVGNKTDLADKRQITIEEGEQRAKELS 138 >2FNA-A nrPDB Length = 357 Score = 27.8 bits (60), Expect = 7.2, Method: Composition-based stats. Identities = 10/47 (21%), Positives = 18/47 (38%), Gaps = 4/47 (8%) Query: 7 KKLLLMGRSGSGKSSMRSIIFSN----YSAFDTRRLGATIDVEHSHL 49 L++G +GKSS+ I + Y D R+ + + Sbjct: 31 PITLVLGLRRTGKSSIIKIGINELNLPYIYLDLRKFEERNYISYKDF 77 >2XTP-A nrPDB Length = 260 Score = 27.4 bits (59), Expect = 8.7, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 51/134 (38%), Gaps = 5/134 (3%) Query: 2 SSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWD 61 +S + +++L+G++G+GKS+ + I + GN + + D Sbjct: 18 ASRSELRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCSKSQGSWGNREIVIID 77 Query: 62 CGGQDVFMEN----YFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLR-KYS 116 + ++ Y Q+ ++ + + + + A+ +K++ + + Sbjct: 78 TPDMFSWKDHCEALYKEVQRCYLLSAPGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDA 137 Query: 117 PDAKIFVLLHKMDL 130 I + HK DL Sbjct: 138 MGHTIVLFTHKEDL 151 >6BWF-A nrPDB Length = 954 Score = 27.4 bits (59), Expect = 9.1, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 6/106 (5%) Query: 10 LLMGRSGSGKSSMRSIIFSNYSAFDTRRLGATIDVEHSHLRFLGNMTLNLWDCGGQDVFM 69 + MGR K+S +I S L E SH+ + + + Sbjct: 400 MWMGRLNMRKNSWYKVILSILVPPAILMLEYKTKAEMSHIPQSQDAHQMTME--DSENNF 457 Query: 70 ENYFTKQKDHIFQMVQVLIHVFDVESTEVLKDIEIFAKALKQLRKY 115 N + +F+ V++L D + +I I +K L RK+ Sbjct: 458 HNITEEIPMEVFKEVKIL----DSSDGKNEMEIHIKSKKLPITRKF 499 >3VX4-A nrPDB Length = 273 Score = 27.4 bits (59), Expect = 9.1, Method: Composition-based stats. Identities = 11/33 (33%), Positives = 19/33 (57%) Query: 1 MSSNNRKKLLLMGRSGSGKSSMRSIIFSNYSAF 33 +S K+ L+G SGSGK+++ +I + Y Sbjct: 56 LSIKKGSKVSLVGASGSGKTTLAKLIVNFYEPN 88 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.314 0.130 0.332 Lambda K H 0.267 0.0398 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 10,545,175 Number of Sequences: 36641 Number of extensions: 373671 Number of successful extensions: 1717 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 188 Number of HSP's that attempted gapping in prelim test: 1602 Number of HSP's gapped (non-prelim): 225 length of query: 310 length of database: 10,336,785 effective HSP length: 97 effective length of query: 213 effective length of database: 6,782,608 effective search space: 1444695504 effective search space used: 1444695504 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 59 (27.4 bits)