BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P9WKI1 (367 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 1GR0-A nrPDB 748 0.0 3CIN-A nrPDB 110 8e-25 3QVT-A nrPDB 43 2e-04 1JKF-A nrPDB 38 0.008 1C5G-A nrPDB 32 0.31 4Z7E-A nrPDB 31 1.1 4CCW-A nrPDB 29 3.0 4F11-A nrPDB 28 5.5 1V4N-A nrPDB 28 5.5 5GQO-A nrPDB 28 5.9 >1GR0-A nrPDB Length = 367 Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust. Identities = 367/367 (100%), Positives = 367/367 (100%) Query: 1 MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVR 60 MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVR Sbjct: 1 MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVR 60 Query: 61 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTI 120 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTI Sbjct: 61 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTI 120 Query: 121 ELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP 180 ELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP Sbjct: 121 ELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP 180 Query: 181 VWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNML 240 VWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNML Sbjct: 181 VWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNML 240 Query: 241 ERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPL 300 ERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPL Sbjct: 241 ERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPL 300 Query: 301 NLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQ 360 NLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQ Sbjct: 301 NLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQ 360 Query: 361 LEEFIIG 367 LEEFIIG Sbjct: 361 LEEFIIG 367 >3CIN-A nrPDB Length = 394 Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 106/375 (28%), Positives = 173/375 (46%), Gaps = 44/375 (11%) Query: 16 VRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKV 75 V+V I+G G AS+ V G+E + G+ R P D+K V ++DVD K+ Sbjct: 14 VKVLILGQGYVASTFVAGLEKLRKGEIEPY--GVPLARELPIGFEDIKIVGSYDVDRAKI 71 Query: 76 GFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDA----EPVD-V 130 G LS+ + N+ D ++ +++G L + + L D+ E VD + Sbjct: 72 GKKLSEVVKQYWNDV----DSLTSDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTL 127 Query: 131 VQALKEAKVDVLVS------YLPVGSEE----------ADKFYAQCAID----------A 164 V+ E DV+V+ ++P G++E ++ A Sbjct: 128 VKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERLTATQVYAYAAALYANKRG 187 Query: 165 GVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGAT-ITHRVLAKLFEDRGVQLD 223 G AFVN +P FIA+DP + + + + + GDD GAT T VL+ L + R + Sbjct: 188 GAAFVNVIPTFIANDPAFVELAKENNLVVFGDD--GATGATPFTADVLSHLAQ-RNRYVK 244 Query: 224 RTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDR 283 Q N+GGNMDFL + + + +SK+ +K+ V L + +I P+ ++ L D+ Sbjct: 245 DVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGYDAPH---YIKPTGYLEPLGDK 301 Query: 284 KWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAY 343 K+ + +E +F L + DSP G+++D VR KIA DR G V P +A+ Sbjct: 302 KFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRKEFGTVYPVNAF 361 Query: 344 LMKSPPEQLPDDIAR 358 MK+P +I R Sbjct: 362 YMKNPGPAEEKNIPR 376 >3QVT-A nrPDB Length = 392 Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 18/179 (10%) Query: 153 ADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLA 212 A YA A+ G+ + N P ++ P + VP G+D K+ G T+ LA Sbjct: 181 ASMLYAYAALKLGLPYANFTPSPGSAIPALKELAEKKGVPHAGNDGKT--GETLVKTTLA 238 Query: 213 KLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKRE-FKTKDVHI 271 +F R +++ M N+ G+ D + R+ ESK +SK + + L + ++ Sbjct: 239 PMFAYRNMEVVGWMSYNILGDYDGKVLSARDNKESKVLSKDKVLEKMLGYSPYSITEIQY 298 Query: 272 GPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKD 330 PS L D K A+ + + F + + +WD+ IDA+ AA + D Sbjct: 299 FPS-----LVDNKTAFDFVHFKGFLGKLMKFYF---IWDA-------IDAIVAAPLILD 342 >1JKF-A nrPDB Length = 533 Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust. Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 7/102 (6%) Query: 157 YAQCAIDAGVAFVNALP--VFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVLAKL 214 +A +I GV ++N P F+ P + I GDD+KS G T VLA+ Sbjct: 281 FAAASILEGVPYINGSPQNTFV---PGLVQLAEHEGTFIAGDDLKS--GQTKLKSVLAQF 335 Query: 215 FEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAV 256 D G++ N GN D N+ ++ SK+ISK+ + Sbjct: 336 LVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVI 377 >1C5G-A nrPDB Length = 402 Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust. Identities = 14/32 (43%), Positives = 21/32 (65%) Query: 110 DGIGKYYADTIELSDAEPVDVVQALKEAKVDV 141 D ++ AD LSD EP+ V QAL++ K++V Sbjct: 320 DMFRQFQADFTSLSDQEPLHVAQALQKVKIEV 351 >4Z7E-A nrPDB Length = 293 Score = 30.8 bits (68), Expect = 1.1, Method: Compositional matrix adjust. Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%) Query: 84 FASENNTIKIADVAPTNVIVQRGPTLD---------GIGKYYADTI-ELSDAEPVDVVQA 133 FA ENN KI+D+ P + V+ G TL+ GI Y T L EP A Sbjct: 136 FAKENNLEKISDLGPVSDQVKAGFTLEFKDRSDGYKGIQDKYGLTFSNLKTMEPKLRYNA 195 Query: 134 LKEAKVDVLVSY 145 +K +++L +Y Sbjct: 196 IKSGDINLLDAY 207 >4CCW-A nrPDB Length = 299 Score = 29.3 bits (64), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%) Query: 182 WAKKFTDARVPIVGDDIKS---QVGATITHRV--LAKLFEDRGVQLDRTMQLNVGGNMDF 236 W+ K+ V I+GD KS + T T L +F++ G++ + L++GG + Sbjct: 77 WSSKYRTYAVDIIGDKNKSIPENLSGTRTDYANWLLDVFDNLGIEKSHMIGLSLGG-LHT 135 Query: 237 LNMLER--ERLESKKI 250 +N L R ER++S I Sbjct: 136 MNFLLRMPERVKSAAI 151 >4F11-A nrPDB Length = 433 Score = 28.5 bits (62), Expect = 5.5, Method: Compositional matrix adjust. Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Query: 224 RTMQLNVGGNMDFLNMLERERLESKKISKTQAVT-SNLKREFKTKDVHIGPSDHVGWLDD 282 R ++ N+ M+ ++ E L SK+I T +RE+ K +GPS G+ D Sbjct: 260 RCLRKNLLAAMEGYIGVDFEPLSSKQIKTISGKTPQQYEREYNNKRSGVGPSKFHGYAYD 319 Query: 283 RKWAYVRLEGRA 294 W + RA Sbjct: 320 GIWVIAKTLQRA 331 >1V4N-A nrPDB Length = 281 Score = 28.1 bits (61), Expect = 5.5, Method: Compositional matrix adjust. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Query: 256 VTSNLKREFKTKDVHIGPSDHV--GWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVW 309 + +N+K E K + PSD++ G L+ RK A++ GR P + Y+ +W Sbjct: 24 ILTNVK-EIKVYTPYGEPSDNIILGELEGRKVAFLPRHGRGHRIPPHKINYRANIW 78 >5GQO-A nrPDB Length = 190 Score = 28.1 bits (61), Expect = 5.9, Method: Compositional matrix adjust. Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 2/75 (2%) Query: 9 APEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAF 68 +PE + E ++ NC +L +GV D+ V G H+ Y R+ ++ Sbjct: 61 SPEGTWEPGNSLYVTVNCWGNLARGVSASLGKGDSVVVVG--HLYTNEYEDREGVRRSSV 118 Query: 69 DVDAKKVGFDLSDAI 83 +V A VG DLS I Sbjct: 119 EVRATAVGPDLSRCI 133 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 1GR0-A nrPDB 564 e-161 3CIN-A nrPDB 436 e-122 3QVT-A nrPDB 211 4e-55 Sequences not found previously or not previously below threshold: 1JKF-A nrPDB 82 4e-16 1VKO-A nrPDB 67 8e-12 2BW0-A nrPDB 34 0.087 1V4N-A nrPDB 32 0.44 1C5G-A nrPDB 31 0.69 2A8Y-A nrPDB 31 0.98 5FWQ-A nrPDB 30 1.6 1PBG-A nrPDB 28 5.4 1EUZ-A nrPDB 28 5.6 3ID7-A nrPDB 28 7.9 1EU1-A nrPDB 28 8.0 >1GR0-A nrPDB Length = 367 Score = 564 bits (1454), Expect = e-161, Method: Composition-based stats. Identities = 367/367 (100%), Positives = 367/367 (100%) Query: 1 MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVR 60 MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVR Sbjct: 1 MSEHQSLPAPEASTEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVR 60 Query: 61 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTI 120 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTI Sbjct: 61 DVKFVAAFDVDAKKVGFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTI 120 Query: 121 ELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP 180 ELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP Sbjct: 121 ELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVAFVNALPVFIASDP 180 Query: 181 VWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNML 240 VWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNML Sbjct: 181 VWAKKFTDARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNML 240 Query: 241 ERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPL 300 ERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPL Sbjct: 241 ERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPL 300 Query: 301 NLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQ 360 NLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQ Sbjct: 301 NLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAYLMKSPPEQLPDDIARAQ 360 Query: 361 LEEFIIG 367 LEEFIIG Sbjct: 361 LEEFIIG 367 >3CIN-A nrPDB Length = 394 Score = 436 bits (1120), Expect = e-122, Method: Composition-based stats. Identities = 106/375 (28%), Positives = 173/375 (46%), Gaps = 44/375 (11%) Query: 16 VRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVDAKKV 75 V+V I+G G AS+ V G+E + G+ R P D+K V ++DVD K+ Sbjct: 14 VKVLILGQGYVASTFVAGLEKLRKGEIEPY--GVPLARELPIGFEDIKIVGSYDVDRAKI 71 Query: 76 GFDLSDAIFASENNTIKIADVAPTNVIVQRGPTLDGIGKYYADTIELSDA----EPVD-V 130 G LS+ + N+ D ++ +++G L + + L D+ E VD + Sbjct: 72 GKKLSEVVKQYWNDV----DSLTSDPEIRKGVHLGSVRNLPIEAEGLEDSMTLKEAVDTL 127 Query: 131 VQALKEAKVDVLVS------YLPVGSEE----------ADKFYAQCAI----------DA 164 V+ E DV+V+ ++P G++E ++ A Sbjct: 128 VKEWTELDPDVIVNTCTTEAFVPFGNKEDLLKAIENNDKERLTATQVYAYAAALYANKRG 187 Query: 165 GVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGAT-ITHRVLAKLFEDRGVQLD 223 G AFVN +P FIA+DP + + + + + GDD GAT T VL+ L + R + Sbjct: 188 GAAFVNVIPTFIANDPAFVELAKENNLVVFGDDG--ATGATPFTADVLSHLAQ-RNRYVK 244 Query: 224 RTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHIGPSDHVGWLDDR 283 Q N+GGNMDFL + + + +SK+ +K+ V L + +I P+ ++ L D+ Sbjct: 245 DVAQFNIGGNMDFLALTDDGKNKSKEFTKSSIVKDILGYDAPH---YIKPTGYLEPLGDK 301 Query: 284 KWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAKIAKDRGIGGPVIPASAY 343 K+ + +E +F L + DSP G+++D VR KIA DR G V P +A+ Sbjct: 302 KFIAIHIEYVSFNGATDELMINGRINDSPALGGLLVDLVRLGKIALDRKEFGTVYPVNAF 361 Query: 344 LMKSPPEQLPDDIAR 358 MK+P +I R Sbjct: 362 YMKNPGPAEEKNIPR 376 >3QVT-A nrPDB Length = 392 Score = 211 bits (537), Expect = 4e-55, Method: Composition-based stats. Identities = 73/364 (20%), Positives = 136/364 (37%), Gaps = 71/364 (19%) Query: 16 VRVAIVGV-GNCASSLVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVKFVAAFDVD--- 71 ++V +VG G +++ + G P + V P H ++ A F + Sbjct: 1 MKVWLVGAYGIVSTTAMVGARAIERG----IAPKIGLVSELP-HFEGIEKYAPFSFEFGG 55 Query: 72 -AKKVGFDLSDAIFASEN-------NTIKIADVAPTNVIVQRGPTLD---GIGKY----Y 116 ++ + +A ++ ++ ++G L+ GI + Sbjct: 56 HEIRLLSNAYEAAKEHWELNRHFDREILEAVKSDLEGIVARKGTALNCGSGIKELGDIKT 115 Query: 117 ADTIELSDAEPVDVVQALKEAKVD---VLVSY-----LPVGSEE---------------- 152 + LS AE V ++ ++ D V+++ LP SEE Sbjct: 116 LEGEGLSLAEMVSRIEEDIKSFADDETVVINVASTEPLPNYSEEYHGSLEGFERMIDEDR 175 Query: 153 -----ADKFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIKSQVGATIT 207 A YA A+ G+ + N P ++ P + VP G+D K+ G T+ Sbjct: 176 KEYASASMLYAYAALKLGLPYANFTPSPGSAIPALKELAEKKGVPHAGNDGKT--GETLV 233 Query: 208 HRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKRE-FKT 266 LA +F R +++ M N+ G+ D + R+ ESK +SK + + L + Sbjct: 234 KTTLAPMFAYRNMEVVGWMSYNILGDYDGKVLSARDNKESKVLSKDKVLEKMLGYSPYSI 293 Query: 267 KDVHIGPSDHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRAAK 326 ++ PS L D K A+ + + F + + +WD+ IDA+ AA Sbjct: 294 TEIQYFPS-----LVDNKTAFDFVHFKGFLGKLMKFYF---IWDA-------IDAIVAAP 338 Query: 327 IAKD 330 + D Sbjct: 339 LILD 342 >1JKF-A nrPDB Length = 533 Score = 81.7 bits (200), Expect = 4e-16, Method: Composition-based stats. Identities = 50/242 (20%), Positives = 83/242 (34%), Gaps = 35/242 (14%) Query: 154 DKFYAQCAIDAGVAFVNALP--VFIASDPVWAKKFTDARVPIVGDDIKSQVGATITHRVL 211 +A +I GV ++N P F+ P + I GDD+KS G T VL Sbjct: 278 STIFAAASILEGVPYINGSPQNTFV---PGLVQLAEHEGTFIAGDDLKS--GQTKLKSVL 332 Query: 212 AKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESKKISKTQAVTSNLKREFKTKDVHI 271 A+ D G++ N GN D N+ ++ SK+ISK+ + + + + Sbjct: 333 AQFLVDAGIKPVSIASYNHLGNNDGYNLSAPKQFRSKEISKSSVIDDIIASNDILYNDKL 392 Query: 272 GPS-------DHVGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVIIDAVRA 324 G ++ + D K A + DS + +IID + Sbjct: 393 GKKVDHCIVIKYMKPVGDSKVAMDEYYSELMLGGHNRISIHNVCEDSLLATPLIIDLLVM 452 Query: 325 A------------KIAKDRGIGGPVIPA---SAYLMKSP------PEQLPDDIARAQLEE 363 + +D G P +Y +K+P + R LE Sbjct: 453 TEFCTRVSYKKVDPVKEDAGKFENFYPVLTFLSYWLKAPLTRPGFHPVNGLNKQRTALEN 512 Query: 364 FI 365 F+ Sbjct: 513 FL 514 >1VKO-A nrPDB Length = 537 Score = 67.5 bits (163), Expect = 8e-12, Method: Composition-based stats. Identities = 44/205 (21%), Positives = 73/205 (35%), Gaps = 10/205 (4%) Query: 131 VQALKEAKVDVLVSYLPVGSEEAD--KFYAQCAIDAGVAFVNALPVFIASDPVWAKKFTD 188 V+ A D ++ + V +E +A +I G ++N P P + Sbjct: 257 VRQGLNATADEIMESIRVNEDEVSPSNIFAVASILEGAHYINGSPQ-NTLVPGLIELAER 315 Query: 189 ARVPIVGDDIKSQVGATITHRVLAKLFEDRGVQLDRTMQLNVGGNMDFLNMLERERLESK 248 +V + GDD KS G T G++ + + N GN D N+ E + SK Sbjct: 316 HKVFVGGDDFKS--GQTKFKSAFVDFLVSSGMKPESIVSYNHLGNNDGKNLSEARQFRSK 373 Query: 249 KISKTQAVTSNLKREFKTKDVHIGPS-----DHVGWLDDRKWAYVRLEGRAFGDVPLNLE 303 +ISK+ V +K P +V ++ D K A F Sbjct: 374 EISKSSVVDDMVKSNQILFPDAKNPDYCVVIKYVPYVADSKRAMDEYICSIFMGGKQTFV 433 Query: 304 YKLEVWDSPNSAGVIIDAVRAAKIA 328 DS ++ +I D ++A Sbjct: 434 VHNTCEDSLLASPLIYDLAILTELA 458 >2BW0-A nrPDB Length = 329 Score = 34.3 bits (77), Expect = 0.087, Method: Composition-based stats. Identities = 22/103 (21%), Positives = 41/103 (39%), Gaps = 5/103 (4%) Query: 97 APTNVIVQRGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVDVLVSYLPVGSEEADKF 156 AP + G T +GI K +T +++ +P + + V ++ ++ F Sbjct: 210 APRLPQPEEGATYEGIQK--KETAKINWDQPAEAIHNWIRGNDKVPGAWTEACEQKLTFF 267 Query: 157 YAQCAIDAGVAFVNALPVFIASDPVWAKKFTDARVPIVGDDIK 199 + V +ALP+ A P T A + + G+D K Sbjct: 268 NSTLNTSGLVPEGDALPIPGAHRPGVV---TKAGLILFGNDDK 307 >1V4N-A nrPDB Length = 281 Score = 32.0 bits (71), Expect = 0.44, Method: Composition-based stats. Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 3/81 (3%) Query: 262 REFKTKDVHIGPSDH--VGWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVII 319 +E K + PSD+ +G L+ RK A++ GR P + Y+ +W + + Sbjct: 29 KEIKVYTPYGEPSDNIILGELEGRKVAFLPRHGRGHRIPPHKINYRANIWALKSLGVKWV 88 Query: 320 DAVRA-AKIAKDRGIGGPVIP 339 AV A + D G V+P Sbjct: 89 IAVSAVGSLRLDYKPGDFVVP 109 >1C5G-A nrPDB Length = 402 Score = 31.2 bits (69), Expect = 0.69, Method: Composition-based stats. Identities = 35/152 (23%), Positives = 62/152 (40%), Gaps = 19/152 (12%) Query: 8 PAPEASTEVRVAIVGVGNCASS-LVQGVEYYYNADDTSTVPGLMHVRFGPYHVRDVK-FV 65 P P++ST R+ G+ S ++ + + T+ + PYH + F+ Sbjct: 201 PFPDSSTHRRLFHKSDGSTVSVPMMAQTNKFNYTEFTTPDGHYYDILELPYHGDTLSMFI 260 Query: 66 AA---FDVDAKKVGFDLSDAIFASENNTIKIAD--------VAPTNVIVQR-----GPTL 109 AA +V + LS + + + T V +++ G T Sbjct: 261 AAPYEKEVPLSALTNILSAQLISHWKGNMTRLPRLLVLPKFSLETEVDLRKPLENLGMT- 319 Query: 110 DGIGKYYADTIELSDAEPVDVVQALKEAKVDV 141 D ++ AD LSD EP+ V QAL++ K++V Sbjct: 320 DMFRQFQADFTSLSDQEPLHVAQALQKVKIEV 351 >2A8Y-A nrPDB Length = 270 Score = 30.9 bits (68), Expect = 0.98, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 3/81 (3%) Query: 262 REFKTKDVHIGPSDHV--GWLDDRKWAYVRLEGRAFGDVPLNLEYKLEVWDSPNSAGVII 319 +E K + PSD + G + ++ A++ GR P + Y+ +W + Sbjct: 28 KEIKVYTPYGQPSDFITIGKIGNKSVAFLPRHGRGHRIPPHKINYRANIWALKELGVRWV 87 Query: 320 DAVRA-AKIAKDRGIGGPVIP 339 +V A + D +G VIP Sbjct: 88 ISVSAVGSLRMDYKLGDFVIP 108 >5FWQ-A nrPDB Length = 633 Score = 30.1 bits (66), Expect = 1.6, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 1/69 (1%) Query: 109 LDGIGKYYADTIELSDAEP-VDVVQALKEAKVDVLVSYLPVGSEEADKFYAQCAIDAGVA 167 L G G+ + P +V L + DV S +P A FY + + Sbjct: 358 LGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEKGFALLFYLEQLLGGPEI 417 Query: 168 FVNALPVFI 176 F+ L ++ Sbjct: 418 FLGFLKAYV 426 >1PBG-A nrPDB Length = 468 Score = 28.2 bits (61), Expect = 5.4, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Query: 317 VIIDAVRAAKIAKDRGIGGPVIPASAYLMKSP-PEQLPDDIARAQLEEFI 365 +++ RA K+ KD+G G + A K P + P D+ A+LE+ I Sbjct: 192 MMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDII 241 >1EUZ-A nrPDB Length = 419 Score = 28.2 bits (61), Expect = 5.6, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 33/83 (39%), Gaps = 15/83 (18%) Query: 105 RGPTLDGIGKYYADTIELSDAEPVDVVQALKEAKVD---------VLVSYLPVGSEEADK 155 RGPT GI + A+T LS + + K A VD ++V+ + E ++ Sbjct: 65 RGPTKGGIRWHPAET--LSTVKALATWMTWKVAVVDLPYGGGKGGIIVNPKELSEREQER 122 Query: 156 F---YAQCAIDAGVAFVNALPVF 175 Y + D + + +P Sbjct: 123 LARAYIRAVYDVIGPWTD-IPAP 144 >3ID7-A nrPDB Length = 400 Score = 27.8 bits (60), Expect = 7.9, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 14/95 (14%) Query: 163 DAGVAFVNALPVFIASDPV-WAKKFTDARVPIVGDDIKSQ-----VGATITHRVLAKLFE 216 + G+A V +P F+ V W + D + S V A RV + Sbjct: 236 NGGMAMVTFVPKFVLQAAVDWTAEADDNMRAHGFHHLDSSPEAMKVHAAFEERVPRPVAT 295 Query: 217 --------DRGVQLDRTMQLNVGGNMDFLNMLERE 243 D ++ L +GG+ D Sbjct: 296 VSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDG 330 >1EU1-A nrPDB Length = 780 Score = 27.8 bits (60), Expect = 8.0, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 18/38 (47%) Query: 13 STEVRVAIVGVGNCASSLVQGVEYYYNADDTSTVPGLM 50 S +V + + GNC +++ VE Y A T TV Sbjct: 740 SLDVGTSKLAQGNCGQTILADVEKYAGAPVTVTVFDTP 777 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.313 0.129 0.327 Lambda K H 0.267 0.0385 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,637,617 Number of Sequences: 36641 Number of extensions: 477978 Number of successful extensions: 1496 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1462 Number of HSP's gapped (non-prelim): 35 length of query: 367 length of database: 10,336,785 effective HSP length: 98 effective length of query: 269 effective length of database: 6,745,967 effective search space: 1814665123 effective search space used: 1814665123 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.8 bits)