BLASTP 2.2.23 [Feb-03-2010] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= P9WJB7 (132 letters) Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta 36,641 sequences; 10,336,785 total letters Searching..................................................done Results from round 1 Score E Sequences producing significant alignments: (bits) Value 4NDW-A nrPDB 275 4e-75 3QF3-A nrPDB 272 3e-74 5AFO-A nrPDB 31 0.16 5X2B-D nrPDB 30 0.25 4C50-A nrPDB 30 0.28 6CEK-A nrPDB 30 0.34 4AOY-A nrPDB 28 1.3 1XX4-A nrPDB 28 1.3 1U9Y-A nrPDB 28 1.3 5XIG-A nrPDB 27 1.9 5DMH-A nrPDB 27 2.5 1U2K-A nrPDB 27 2.8 1C8O-A nrPDB 26 3.9 1BE1-A nrPDB 26 4.1 5EKT-A nrPDB 26 4.5 1NAM-B nrPDB 26 5.3 5XIP-A nrPDB 26 5.9 1EUZ-A nrPDB 26 6.2 >4NDW-A nrPDB Length = 153 Score = 275 bits (703), Expect = 4e-75, Method: Compositional matrix adjust. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGAT 60 MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGAT Sbjct: 22 MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGAT 81 Query: 61 MAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDR 120 MAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDR Sbjct: 82 MAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDR 141 Query: 121 IDELRRAEGIDA 132 IDELRRAEGIDA Sbjct: 142 IDELRRAEGIDA 153 >3QF3-A nrPDB Length = 133 Score = 272 bits (695), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 131/131 (100%), Positives = 131/131 (100%) Query: 2 STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATM 61 STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATM Sbjct: 3 STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATM 62 Query: 62 AALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRI 121 AALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRI Sbjct: 63 AALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRI 122 Query: 122 DELRRAEGIDA 132 DELRRAEGIDA Sbjct: 123 DELRRAEGIDA 133 >5AFO-A nrPDB Length = 362 Score = 30.8 bits (68), Expect = 0.16, Method: Compositional matrix adjust. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Query: 23 PHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALA----NFFRIKAAYFTD- 77 P T + K E + S P L SG T G +AA +F +A F Sbjct: 148 PQTIIVSVFGTKKENVYSSVPISQVLLSGKVTVTQGCELAAGTSLDIDFGEYQAHDFKGR 207 Query: 78 ----DEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAA 113 + +K+ KEL + CT DGV I G P+AA Sbjct: 208 TGQPPQNVQKIQKELTFNCTNISDGV-HIYLSLEGTPNAA 246 >5X2B-D nrPDB Length = 281 Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust. Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 4 TFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAP 43 +F AR + +F YP G H AEVI + GIT+++P Sbjct: 25 SFDAREDDIFLVSYPKS-GTHWLAEVIERIPDAGITLTSP 63 >4C50-A nrPDB Length = 740 Score = 30.0 bits (66), Expect = 0.28, Method: Compositional matrix adjust. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 20 GRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALA-NFFRIKAAYFTDD 78 G+G AE + KA +T+SAP ++ L G R GA L F + T+D Sbjct: 599 GKGNPLPAEYMLLDKANLLTLSAPEMTVLVGGLRV--LGANYKRLPLGVFTEASESLTND 656 Query: 79 EYYEKLDKELQWLCTMRDDG 98 + LD + W + DDG Sbjct: 657 FFVNLLDMGITWEPSPADDG 676 >6CEK-A nrPDB Length = 728 Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust. Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 27 AEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMA-ALANFFRIKAAYFTDDEYYEKLD 85 AEV+ KA+ +T+SAP ++ L G R GA + + F + T+D + LD Sbjct: 593 AEVLLVDKAQLLTLSAPEMTVLLGGLRV--LGANVGQSRHGVFTAREQALTNDFFVNLLD 650 Query: 86 KELQWLCTMRDDGVRRIAQRAHG 108 +W T D V RA G Sbjct: 651 MGTEWKPTAADADVFEGRDRATG 673 >4AOY-A nrPDB Length = 402 Score = 28.1 bits (61), Expect = 1.3, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 77 DDEYYEKLD-KELQWLCTMRDDGVRRIAQRAHGL 109 ++EY EK + K LQ+ T+ DD V RI + G+ Sbjct: 230 ENEYKEKFEAKNLQYFYTLIDDAVARIIRSEGGM 263 >1XX4-A nrPDB Length = 261 Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust. Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 6/90 (6%) Query: 20 GRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDE 79 GR P AE A++ + + L+ + + N +P+G + AL +RI A + + Sbjct: 74 GRNPAHYAEYWKAVQELWLRLYLSNLTLISAINGASPAGGCLMALTCDYRIMA---DNSK 130 Query: 80 YYEKLDKELQWLCT---MRDDGVRRIAQRA 106 Y L++ L + ++D+ V I RA Sbjct: 131 YTIGLNESLLGIVAPFWLKDNYVNTIGHRA 160 >1U9Y-A nrPDB Length = 284 Score = 27.7 bits (60), Expect = 1.3, Method: Compositional matrix adjust. Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Query: 32 ALKAEG---ITMSAPYLSQLRSGNRTNPSGA-TMAALANFF 68 AL+ EG IT+ APYL+ R + NP A ++ ALA + Sbjct: 72 ALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIY 112 >5XIG-A nrPDB Length = 500 Score = 27.3 bits (59), Expect = 1.9, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 66 NFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGV 99 NF ++ F D+E +++L + W CT R GV Sbjct: 235 NFAKMFEIEFEDEEGHKRLVHQTSWGCTTRSLGV 268 >5DMH-A nrPDB Length = 454 Score = 26.9 bits (58), Expect = 2.5, Method: Compositional matrix adjust. Identities = 11/21 (52%), Positives = 17/21 (80%) Query: 21 RGPHTSAEVIAALKAEGITMS 41 RG H +AE IAAL+++G+ M+ Sbjct: 209 RGAHATAERIAALRSDGVRMA 229 >1U2K-A nrPDB Length = 309 Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 25 TSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALAN-FFRIKAAYFTDDEYYEK 83 ++ E + KA+ +T++AP ++ L G R GA N F + ++D + Sbjct: 172 STTESLLIDKAQQLTLTAPEMTALVGGMRV--LGANFDGSKNGVFTDRVGVLSNDFFVNL 229 Query: 84 LDKELQWLCT 93 LD +W T Sbjct: 230 LDMRYEWKAT 239 >1C8O-A nrPDB Length = 300 Score = 26.2 bits (56), Expect = 3.9, Method: Compositional matrix adjust. Identities = 16/79 (20%), Positives = 39/79 (49%), Gaps = 1/79 (1%) Query: 28 EVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKE 87 E+ +++K E + +S P +S + + +G+T L+ + +A DD ++ ++K Sbjct: 6 EIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADKNKDDISFKSMNKV 65 Query: 88 L-QWLCTMRDDGVRRIAQR 105 ++ +D +R+I Sbjct: 66 YGRYSAVFKDSFLRKIGDN 84 >1BE1-A nrPDB Length = 137 Score = 26.2 bits (56), Expect = 4.1, Method: Compositional matrix adjust. Identities = 9/14 (64%), Positives = 10/14 (71%) Query: 13 FDTVYPPGRGPHTS 26 FD VYPPG P T+ Sbjct: 113 FDRVYPPGTSPETT 126 >5EKT-A nrPDB Length = 199 Score = 26.2 bits (56), Expect = 4.5, Method: Compositional matrix adjust. Identities = 11/17 (64%), Positives = 14/17 (82%) Query: 55 NPSGATMAALANFFRIK 71 N SG +AALANF++IK Sbjct: 74 NLSGKAIAALANFYQIK 90 >1NAM-B nrPDB Length = 113 Score = 25.8 bits (55), Expect = 5.3, Method: Compositional matrix adjust. Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%) Query: 80 YYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSA 112 Y + L K+LQWL T+R G + + LP A Sbjct: 36 YQQDLQKQLQWLFTLRSPGDKEV----KSLPGA 64 >5XIP-A nrPDB Length = 498 Score = 25.8 bits (55), Expect = 5.9, Method: Compositional matrix adjust. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 66 NFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGV 99 NF R+ + F D++ ++L + W CT R GV Sbjct: 236 NFSRMFSIEFEDEKGAKQLVHQTSWGCTTRSLGV 269 >1EUZ-A nrPDB Length = 419 Score = 25.8 bits (55), Expect = 6.2, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 55 NPSGATMAALANFFRIKAAYFTDDEYYEKLDKEL 88 N G T++ I Y+T++E EKLDK++ Sbjct: 344 NAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKM 377 Searching..................................................done Results from round 2 Score E Sequences producing significant alignments: (bits) Value Sequences used in model and found again: 4NDW-A nrPDB 278 4e-76 3QF3-A nrPDB 270 1e-73 Sequences not found previously or not previously below threshold: 6CEK-A nrPDB 31 0.14 4C50-A nrPDB 30 0.26 5X2B-D nrPDB 30 0.28 5DMH-A nrPDB 30 0.44 5AFO-A nrPDB 29 0.52 1U9Y-A nrPDB 29 0.83 4AOY-A nrPDB 29 0.97 5XIG-A nrPDB 28 1.6 1C8O-A nrPDB 28 1.7 1NAM-B nrPDB 27 1.7 1U2K-A nrPDB 27 2.7 1BE1-A nrPDB 27 2.8 5EKT-A nrPDB 27 3.5 3AJA-A nrPDB 27 3.6 5XIP-A nrPDB 26 3.9 1EUZ-A nrPDB 26 4.4 4W7V-A nrPDB 26 5.1 CONVERGED! >4NDW-A nrPDB Length = 153 Score = 278 bits (712), Expect = 4e-76, Method: Composition-based stats. Identities = 132/132 (100%), Positives = 132/132 (100%) Query: 1 MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGAT 60 MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGAT Sbjct: 22 MSTTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGAT 81 Query: 61 MAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDR 120 MAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDR Sbjct: 82 MAALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDR 141 Query: 121 IDELRRAEGIDA 132 IDELRRAEGIDA Sbjct: 142 IDELRRAEGIDA 153 >3QF3-A nrPDB Length = 133 Score = 270 bits (690), Expect = 1e-73, Method: Composition-based stats. Identities = 131/131 (100%), Positives = 131/131 (100%) Query: 2 STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATM 61 STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATM Sbjct: 3 STTFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATM 62 Query: 62 AALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRI 121 AALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRI Sbjct: 63 AALANFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAAQQKVLDRI 122 Query: 122 DELRRAEGIDA 132 DELRRAEGIDA Sbjct: 123 DELRRAEGIDA 133 >6CEK-A nrPDB Length = 728 Score = 31.2 bits (69), Expect = 0.14, Method: Composition-based stats. Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 3/83 (3%) Query: 27 AEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMA-ALANFFRIKAAYFTDDEYYEKLD 85 AEV+ KA+ +T+SAP ++ L G R GA + + F + T+D + LD Sbjct: 593 AEVLLVDKAQLLTLSAPEMTVLLGGLRV--LGANVGQSRHGVFTAREQALTNDFFVNLLD 650 Query: 86 KELQWLCTMRDDGVRRIAQRAHG 108 +W T D V RA G Sbjct: 651 MGTEWKPTAADADVFEGRDRATG 673 >4C50-A nrPDB Length = 740 Score = 30.0 bits (66), Expect = 0.26, Method: Composition-based stats. Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 20 GRGPHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALA-NFFRIKAAYFTDD 78 G+G AE + KA +T+SAP ++ L G R GA L F + T+D Sbjct: 599 GKGNPLPAEYMLLDKANLLTLSAPEMTVLVGGLRV--LGANYKRLPLGVFTEASESLTND 656 Query: 79 EYYEKLDKELQWLCTMRDDG 98 + LD + W + DDG Sbjct: 657 FFVNLLDMGITWEPSPADDG 676 >5X2B-D nrPDB Length = 281 Score = 30.0 bits (66), Expect = 0.28, Method: Composition-based stats. Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Query: 4 TFAARLNRLFDTVYPPGRGPHTSAEVIAALKAEGITMSAP 43 +F AR + +F YP G H AEVI + GIT+++P Sbjct: 25 SFDAREDDIFLVSYPKS-GTHWLAEVIERIPDAGITLTSP 63 >5DMH-A nrPDB Length = 454 Score = 29.7 bits (65), Expect = 0.44, Method: Composition-based stats. Identities = 11/22 (50%), Positives = 17/22 (77%) Query: 20 GRGPHTSAEVIAALKAEGITMS 41 RG H +AE IAAL+++G+ M+ Sbjct: 208 ARGAHATAERIAALRSDGVRMA 229 >5AFO-A nrPDB Length = 362 Score = 29.3 bits (64), Expect = 0.52, Method: Composition-based stats. Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 10/100 (10%) Query: 23 PHTSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALA----NFFRIKAAYFTD- 77 P T + K E + S P L SG T G +AA +F +A F Sbjct: 148 PQTIIVSVFGTKKENVYSSVPISQVLLSGKVTVTQGCELAAGTSLDIDFGEYQAHDFKGR 207 Query: 78 ----DEYYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSAA 113 + +K+ KEL + CT DGV I G P+AA Sbjct: 208 TGQPPQNVQKIQKELTFNCTNISDGV-HIYLSLEGTPNAA 246 >1U9Y-A nrPDB Length = 284 Score = 28.5 bits (62), Expect = 0.83, Method: Composition-based stats. Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 4/41 (9%) Query: 32 ALKAEG---ITMSAPYLSQLRSGNRTNPSGA-TMAALANFF 68 AL+ EG IT+ APYL+ R + NP A ++ ALA + Sbjct: 72 ALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIY 112 >4AOY-A nrPDB Length = 402 Score = 28.5 bits (62), Expect = 0.97, Method: Composition-based stats. Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%) Query: 77 DDEYYEKLD-KELQWLCTMRDDGVRRIAQRAHGL 109 ++EY EK + K LQ+ T+ DD V RI + G+ Sbjct: 230 ENEYKEKFEAKNLQYFYTLIDDAVARIIRSEGGM 263 >5XIG-A nrPDB Length = 500 Score = 27.7 bits (60), Expect = 1.6, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 66 NFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGV 99 NF ++ F D+E +++L + W CT R GV Sbjct: 235 NFAKMFEIEFEDEEGHKRLVHQTSWGCTTRSLGV 268 >1C8O-A nrPDB Length = 300 Score = 27.7 bits (60), Expect = 1.7, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 39/77 (50%), Gaps = 1/77 (1%) Query: 28 EVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALANFFRIKAAYFTDDEYYEKLDKE 87 E+ +++K E + +S P +S + + +G+T L+ + +A DD ++ ++K Sbjct: 6 EIASSMKGENVFISPPSISSVLTILYYGANGSTAEQLSKYVEKEADKNKDDISFKSMNKV 65 Query: 88 L-QWLCTMRDDGVRRIA 103 ++ +D +R+I Sbjct: 66 YGRYSAVFKDSFLRKIG 82 >1NAM-B nrPDB Length = 113 Score = 27.4 bits (59), Expect = 1.7, Method: Composition-based stats. Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 4/33 (12%) Query: 80 YYEKLDKELQWLCTMRDDGVRRIAQRAHGLPSA 112 Y + L K+LQWL T+R G + + LP A Sbjct: 36 YQQDLQKQLQWLFTLRSPGDKEVKS----LPGA 64 >1U2K-A nrPDB Length = 309 Score = 27.0 bits (58), Expect = 2.7, Method: Composition-based stats. Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 3/70 (4%) Query: 25 TSAEVIAALKAEGITMSAPYLSQLRSGNRTNPSGATMAALAN-FFRIKAAYFTDDEYYEK 83 ++ E + KA+ +T++AP ++ L G R GA N F + ++D + Sbjct: 172 STTESLLIDKAQQLTLTAPEMTALVGGMRV--LGANFDGSKNGVFTDRVGVLSNDFFVNL 229 Query: 84 LDKELQWLCT 93 LD +W T Sbjct: 230 LDMRYEWKAT 239 >1BE1-A nrPDB Length = 137 Score = 27.0 bits (58), Expect = 2.8, Method: Composition-based stats. Identities = 9/14 (64%), Positives = 10/14 (71%) Query: 13 FDTVYPPGRGPHTS 26 FD VYPPG P T+ Sbjct: 113 FDRVYPPGTSPETT 126 >5EKT-A nrPDB Length = 199 Score = 26.6 bits (57), Expect = 3.5, Method: Composition-based stats. Identities = 11/17 (64%), Positives = 14/17 (82%) Query: 55 NPSGATMAALANFFRIK 71 N SG +AALANF++IK Sbjct: 74 NLSGKAIAALANFYQIK 90 >3AJA-A nrPDB Length = 302 Score = 26.6 bits (57), Expect = 3.6, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%) Query: 18 PPGRGPHTSAEVIAALKAEGITMSAPYLSQLRS-GNRTN 55 P G+G + + AL A G+TM+ P + NRTN Sbjct: 189 PAGQGAEITLHEVPALSALGLTMTGPRPGGFGALDNRTN 227 >5XIP-A nrPDB Length = 498 Score = 26.2 bits (56), Expect = 3.9, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 66 NFFRIKAAYFTDDEYYEKLDKELQWLCTMRDDGV 99 NF R+ + F D++ ++L + W CT R GV Sbjct: 236 NFSRMFSIEFEDEKGAKQLVHQTSWGCTTRSLGV 269 >1EUZ-A nrPDB Length = 419 Score = 26.2 bits (56), Expect = 4.4, Method: Composition-based stats. Identities = 12/34 (35%), Positives = 19/34 (55%) Query: 55 NPSGATMAALANFFRIKAAYFTDDEYYEKLDKEL 88 N G T++ I Y+T++E EKLDK++ Sbjct: 344 NAGGVTVSYFEWVQNINGYYWTEEEVREKLDKKM 377 >4W7V-A nrPDB Length = 332 Score = 25.8 bits (55), Expect = 5.1, Method: Composition-based stats. Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%) Query: 8 RLNRLFDTVYPPGRGPHTSAEVIAALKA-EGITMSAPYL------SQLRSGNRTNPSGAT 60 RL L++ V P GP A++ K+ E + YL SG R S Sbjct: 67 RLPFLWERVQPELNGPLDQAQLGLIKKSLEAAKANKQYLILDLHNYATYSGKRIGTSDVP 126 Query: 61 MAALANFFRIKAAYFTDDE 79 ALA+ +R A F DD+ Sbjct: 127 AGALADLWRRLALEFKDDK 145 Database: ../databases/nrPDB-GO_2019.06.18_sequences.fasta Posted date: Jan 3, 2023 9:05 PM Number of letters in database: 10,336,785 Number of sequences in database: 36,641 Lambda K H 0.320 0.132 0.384 Lambda K H 0.267 0.0407 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 5,180,611 Number of Sequences: 36641 Number of extensions: 189098 Number of successful extensions: 576 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 25 Number of HSP's that attempted gapping in prelim test: 550 Number of HSP's gapped (non-prelim): 49 length of query: 132 length of database: 10,336,785 effective HSP length: 86 effective length of query: 46 effective length of database: 7,185,659 effective search space: 330540314 effective search space used: 330540314 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 53 (25.0 bits)